0.009848
0.000000
0.000015
0.000000
0.029976
0.000000
0.000000
0.000000
0.013652
0.00000
0.00000
0.00000
Leonidas, D.D.
Acharya, K.R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.09
90.00
101.540
33.360
73.250
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C10 H16 N5 O13 P3
507.181
3'-PHOSPHATE-ADENOSINE-5'-DIPHOSPHATE
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
36
5578
5588
10.1021/bi9700330
9154942
Crystal structures of ribonuclease A complexes with 5'-diphosphoadenosine 3'-phosphate and 5'-diphosphoadenosine 2'-phosphate at 1.7 A resolution.
1997
10.2210/pdb1afk/pdb
pdb_00001afk
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293
1
IMAGE PLATE
1995-07
MARRESEARCH
M
x-ray
1
0.92
1.0
X31
EMBL/DESY, HAMBURG
0.92
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE X31
13708.326
RIBONUCLEASE A
3.1.27.5
2
nat
polymer
507.181
3'-PHOSPHATE-ADENOSINE-5'-DIPHOSPHATE
2
syn
non-polymer
18.015
water
162
nat
water
no
no
KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMS
ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMS
ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
cattle
Bos
sample
9913
PANCREAS
Bos taurus
1
2.2
48.
5.5
PROTEIN WAS CRYSTALLIZED FROM 20% PEG 4000, 20 MM SODIUM CITRATE, PH 5.5 AND THEN SOAKED WITH 1MM 5' DIPHOSPHOADENOSINE 3'-PHOSPHATE FOR 2.5 HRS AT 16 C, temperature 289K
289
database_2
diffrn_source
pdbx_initial_refinement_model
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
1998-03-18
1
1
2008-03-24
1
2
2011-07-13
1
3
2023-08-02
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_diffrn_source.pdbx_synchrotron_site
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1997-03-08
REL
PAP
3'-PHOSPHATE-ADENOSINE-5'-DIPHOSPHATE
HOH
water
3RN3
PDB ENTRY 3RN3
PDB
experimental model
PAP
125
2
PAP
PAP
125
A
PAP
125
2
PAP
PAP
125
B
HOH
22
3
HOH
HOH
126
A
HOH
23
3
HOH
HOH
127
A
HOH
24
3
HOH
HOH
128
A
HOH
25
3
HOH
HOH
129
A
HOH
26
3
HOH
HOH
130
A
HOH
29
3
HOH
HOH
131
A
HOH
32
3
HOH
HOH
132
A
HOH
35
3
HOH
HOH
133
A
HOH
36
3
HOH
HOH
134
A
HOH
37
3
HOH
HOH
135
A
HOH
38
3
HOH
HOH
136
A
HOH
39
3
HOH
HOH
137
A
HOH
40
3
HOH
HOH
138
A
HOH
41
3
HOH
HOH
139
A
HOH
42
3
HOH
HOH
140
A
HOH
43
3
HOH
HOH
141
A
HOH
44
3
HOH
HOH
142
A
HOH
45
3
HOH
HOH
143
A
HOH
46
3
HOH
HOH
144
A
HOH
47
3
HOH
HOH
145
A
HOH
48
3
HOH
HOH
146
A
HOH
49
3
HOH
HOH
147
A
HOH
50
3
HOH
HOH
148
A
HOH
51
3
HOH
HOH
149
A
HOH
52
3
HOH
HOH
150
A
HOH
53
3
HOH
HOH
151
A
HOH
54
3
HOH
HOH
152
A
HOH
55
3
HOH
HOH
153
A
HOH
56
3
HOH
HOH
154
A
HOH
57
3
HOH
HOH
155
A
HOH
58
3
HOH
HOH
156
A
HOH
59
3
HOH
HOH
157
A
HOH
60
3
HOH
HOH
158
A
HOH
61
3
HOH
HOH
159
A
HOH
62
3
HOH
HOH
160
A
HOH
63
3
HOH
HOH
161
A
HOH
64
3
HOH
HOH
162
A
HOH
65
3
HOH
HOH
163
A
HOH
66
3
HOH
HOH
164
A
HOH
67
3
HOH
HOH
165
A
HOH
68
3
HOH
HOH
166
A
HOH
69
3
HOH
HOH
167
A
HOH
70
3
HOH
HOH
168
A
HOH
71
3
HOH
HOH
169
A
HOH
72
3
HOH
HOH
170
A
HOH
73
3
HOH
HOH
171
A
HOH
75
3
HOH
HOH
172
A
HOH
76
3
HOH
HOH
173
A
HOH
77
3
HOH
HOH
174
A
HOH
78
3
HOH
HOH
175
A
HOH
79
3
HOH
HOH
176
A
HOH
80
3
HOH
HOH
177
A
HOH
81
3
HOH
HOH
178
A
HOH
82
3
HOH
HOH
179
A
HOH
83
3
HOH
HOH
180
A
HOH
84
3
HOH
HOH
181
A
HOH
85
3
HOH
HOH
182
A
HOH
86
3
HOH
HOH
183
A
HOH
87
3
HOH
HOH
184
A
HOH
88
3
HOH
HOH
185
A
HOH
89
3
HOH
HOH
186
A
HOH
90
3
HOH
HOH
187
A
HOH
131
3
HOH
HOH
188
A
HOH
132
3
HOH
HOH
189
A
HOH
133
3
HOH
HOH
190
A
HOH
134
3
HOH
HOH
191
A
HOH
135
3
HOH
HOH
192
A
HOH
136
3
HOH
HOH
193
A
HOH
137
3
HOH
HOH
194
A
HOH
138
3
HOH
HOH
195
A
HOH
139
3
HOH
HOH
196
A
HOH
140
3
HOH
HOH
197
A
HOH
141
3
HOH
HOH
198
A
HOH
142
3
HOH
HOH
199
A
HOH
143
3
HOH
HOH
200
A
HOH
144
3
HOH
HOH
201
A
HOH
145
3
HOH
HOH
202
A
HOH
146
3
HOH
HOH
203
A
HOH
147
3
HOH
HOH
204
A
HOH
148
3
HOH
HOH
205
A
HOH
149
3
HOH
HOH
206
A
HOH
150
3
HOH
HOH
207
A
HOH
151
3
HOH
HOH
208
A
HOH
152
3
HOH
HOH
209
A
HOH
153
3
HOH
HOH
210
A
HOH
154
3
HOH
HOH
211
A
HOH
155
3
HOH
HOH
212
A
HOH
157
3
HOH
HOH
213
A
HOH
158
3
HOH
HOH
214
A
HOH
159
3
HOH
HOH
215
A
HOH
160
3
HOH
HOH
216
A
HOH
161
3
HOH
HOH
217
A
HOH
162
3
HOH
HOH
218
A
HOH
1
3
HOH
HOH
126
B
HOH
2
3
HOH
HOH
127
B
HOH
3
3
HOH
HOH
128
B
HOH
4
3
HOH
HOH
129
B
HOH
5
3
HOH
HOH
130
B
HOH
6
3
HOH
HOH
131
B
HOH
7
3
HOH
HOH
132
B
HOH
8
3
HOH
HOH
133
B
HOH
9
3
HOH
HOH
134
B
HOH
10
3
HOH
HOH
135
B
HOH
11
3
HOH
HOH
136
B
HOH
12
3
HOH
HOH
137
B
HOH
13
3
HOH
HOH
138
B
HOH
14
3
HOH
HOH
139
B
HOH
15
3
HOH
HOH
140
B
HOH
16
3
HOH
HOH
141
B
HOH
17
3
HOH
HOH
142
B
HOH
18
3
HOH
HOH
143
B
HOH
19
3
HOH
HOH
144
B
HOH
20
3
HOH
HOH
145
B
HOH
21
3
HOH
HOH
146
B
HOH
27
3
HOH
HOH
147
B
HOH
28
3
HOH
HOH
148
B
HOH
30
3
HOH
HOH
149
B
HOH
31
3
HOH
HOH
150
B
HOH
33
3
HOH
HOH
151
B
HOH
34
3
HOH
HOH
152
B
HOH
74
3
HOH
HOH
153
B
HOH
91
3
HOH
HOH
154
B
HOH
92
3
HOH
HOH
155
B
HOH
93
3
HOH
HOH
156
B
HOH
94
3
HOH
HOH
157
B
HOH
95
3
HOH
HOH
158
B
HOH
96
3
HOH
HOH
159
B
HOH
97
3
HOH
HOH
160
B
HOH
98
3
HOH
HOH
161
B
HOH
99
3
HOH
HOH
162
B
HOH
100
3
HOH
HOH
163
B
HOH
101
3
HOH
HOH
164
B
HOH
102
3
HOH
HOH
165
B
HOH
103
3
HOH
HOH
166
B
HOH
104
3
HOH
HOH
167
B
HOH
105
3
HOH
HOH
168
B
HOH
106
3
HOH
HOH
169
B
HOH
107
3
HOH
HOH
170
B
HOH
108
3
HOH
HOH
171
B
HOH
109
3
HOH
HOH
172
B
HOH
110
3
HOH
HOH
173
B
HOH
111
3
HOH
HOH
174
B
HOH
112
3
HOH
HOH
175
B
HOH
113
3
HOH
HOH
176
B
HOH
114
3
HOH
HOH
177
B
HOH
115
3
HOH
HOH
178
B
HOH
116
3
HOH
HOH
179
B
HOH
117
3
HOH
HOH
180
B
HOH
118
3
HOH
HOH
181
B
HOH
119
3
HOH
HOH
182
B
HOH
120
3
HOH
HOH
183
B
HOH
121
3
HOH
HOH
184
B
HOH
122
3
HOH
HOH
185
B
HOH
123
3
HOH
HOH
186
B
HOH
124
3
HOH
HOH
187
B
HOH
125
3
HOH
HOH
188
B
HOH
126
3
HOH
HOH
189
B
HOH
127
3
HOH
HOH
190
B
HOH
128
3
HOH
HOH
191
B
HOH
129
3
HOH
HOH
192
B
HOH
130
3
HOH
HOH
193
B
HOH
156
3
HOH
HOH
194
B
LYS
1
n
1
LYS
1
A
GLU
2
n
2
GLU
2
A
THR
3
n
3
THR
3
A
ALA
4
n
4
ALA
4
A
ALA
5
n
5
ALA
5
A
ALA
6
n
6
ALA
6
A
LYS
7
n
7
LYS
7
A
PHE
8
n
8
PHE
8
A
GLU
9
n
9
GLU
9
A
ARG
10
n
10
ARG
10
A
GLN
11
n
11
GLN
11
A
HIS
12
n
12
HIS
12
A
MET
13
n
13
MET
13
A
ASP
14
n
14
ASP
14
A
SER
15
n
15
SER
15
A
SER
16
n
16
SER
16
A
THR
17
n
17
THR
17
A
SER
18
n
18
SER
18
A
ALA
19
n
19
ALA
19
A
ALA
20
n
20
ALA
20
A
SER
21
n
21
SER
21
A
SER
22
n
22
SER
22
A
SER
23
n
23
SER
23
A
ASN
24
n
24
ASN
24
A
TYR
25
n
25
TYR
25
A
CYS
26
n
26
CYS
26
A
ASN
27
n
27
ASN
27
A
GLN
28
n
28
GLN
28
A
MET
29
n
29
MET
29
A
MET
30
n
30
MET
30
A
LYS
31
n
31
LYS
31
A
SER
32
n
32
SER
32
A
ARG
33
n
33
ARG
33
A
ASN
34
n
34
ASN
34
A
LEU
35
n
35
LEU
35
A
THR
36
n
36
THR
36
A
LYS
37
n
37
LYS
37
A
ASP
38
n
38
ASP
38
A
ARG
39
n
39
ARG
39
A
CYS
40
n
40
CYS
40
A
LYS
41
n
41
LYS
41
A
PRO
42
n
42
PRO
42
A
VAL
43
n
43
VAL
43
A
ASN
44
n
44
ASN
44
A
THR
45
n
45
THR
45
A
PHE
46
n
46
PHE
46
A
VAL
47
n
47
VAL
47
A
HIS
48
n
48
HIS
48
A
GLU
49
n
49
GLU
49
A
SER
50
n
50
SER
50
A
LEU
51
n
51
LEU
51
A
ALA
52
n
52
ALA
52
A
ASP
53
n
53
ASP
53
A
VAL
54
n
54
VAL
54
A
GLN
55
n
55
GLN
55
A
ALA
56
n
56
ALA
56
A
VAL
57
n
57
VAL
57
A
CYS
58
n
58
CYS
58
A
SER
59
n
59
SER
59
A
GLN
60
n
60
GLN
60
A
LYS
61
n
61
LYS
61
A
ASN
62
n
62
ASN
62
A
VAL
63
n
63
VAL
63
A
ALA
64
n
64
ALA
64
A
CYS
65
n
65
CYS
65
A
LYS
66
n
66
LYS
66
A
ASN
67
n
67
ASN
67
A
GLY
68
n
68
GLY
68
A
GLN
69
n
69
GLN
69
A
THR
70
n
70
THR
70
A
ASN
71
n
71
ASN
71
A
CYS
72
n
72
CYS
72
A
TYR
73
n
73
TYR
73
A
GLN
74
n
74
GLN
74
A
SER
75
n
75
SER
75
A
TYR
76
n
76
TYR
76
A
SER
77
n
77
SER
77
A
THR
78
n
78
THR
78
A
MET
79
n
79
MET
79
A
SER
80
n
80
SER
80
A
ILE
81
n
81
ILE
81
A
THR
82
n
82
THR
82
A
ASP
83
n
83
ASP
83
A
CYS
84
n
84
CYS
84
A
ARG
85
n
85
ARG
85
A
GLU
86
n
86
GLU
86
A
THR
87
n
87
THR
87
A
GLY
88
n
88
GLY
88
A
SER
89
n
89
SER
89
A
SER
90
n
90
SER
90
A
LYS
91
n
91
LYS
91
A
TYR
92
n
92
TYR
92
A
PRO
93
n
93
PRO
93
A
ASN
94
n
94
ASN
94
A
CYS
95
n
95
CYS
95
A
ALA
96
n
96
ALA
96
A
TYR
97
n
97
TYR
97
A
LYS
98
n
98
LYS
98
A
THR
99
n
99
THR
99
A
THR
100
n
100
THR
100
A
GLN
101
n
101
GLN
101
A
ALA
102
n
102
ALA
102
A
ASN
103
n
103
ASN
103
A
LYS
104
n
104
LYS
104
A
HIS
105
n
105
HIS
105
A
ILE
106
n
106
ILE
106
A
ILE
107
n
107
ILE
107
A
VAL
108
n
108
VAL
108
A
ALA
109
n
109
ALA
109
A
CYS
110
n
110
CYS
110
A
GLU
111
n
111
GLU
111
A
GLY
112
n
112
GLY
112
A
ASN
113
n
113
ASN
113
A
PRO
114
n
114
PRO
114
A
TYR
115
n
115
TYR
115
A
VAL
116
n
116
VAL
116
A
PRO
117
n
117
PRO
117
A
VAL
118
n
118
VAL
118
A
HIS
119
n
119
HIS
119
A
PHE
120
n
120
PHE
120
A
ASP
121
n
121
ASP
121
A
ALA
122
n
122
ALA
122
A
SER
123
n
123
SER
123
A
VAL
124
n
124
VAL
124
A
LYS
1
n
1
LYS
1
B
GLU
2
n
2
GLU
2
B
THR
3
n
3
THR
3
B
ALA
4
n
4
ALA
4
B
ALA
5
n
5
ALA
5
B
ALA
6
n
6
ALA
6
B
LYS
7
n
7
LYS
7
B
PHE
8
n
8
PHE
8
B
GLU
9
n
9
GLU
9
B
ARG
10
n
10
ARG
10
B
GLN
11
n
11
GLN
11
B
HIS
12
n
12
HIS
12
B
MET
13
n
13
MET
13
B
ASP
14
n
14
ASP
14
B
SER
15
n
15
SER
15
B
SER
16
n
16
SER
16
B
THR
17
n
17
THR
17
B
SER
18
n
18
SER
18
B
ALA
19
n
19
ALA
19
B
ALA
20
n
20
ALA
20
B
SER
21
n
21
SER
21
B
SER
22
n
22
SER
22
B
SER
23
n
23
SER
23
B
ASN
24
n
24
ASN
24
B
TYR
25
n
25
TYR
25
B
CYS
26
n
26
CYS
26
B
ASN
27
n
27
ASN
27
B
GLN
28
n
28
GLN
28
B
MET
29
n
29
MET
29
B
MET
30
n
30
MET
30
B
LYS
31
n
31
LYS
31
B
SER
32
n
32
SER
32
B
ARG
33
n
33
ARG
33
B
ASN
34
n
34
ASN
34
B
LEU
35
n
35
LEU
35
B
THR
36
n
36
THR
36
B
LYS
37
n
37
LYS
37
B
ASP
38
n
38
ASP
38
B
ARG
39
n
39
ARG
39
B
CYS
40
n
40
CYS
40
B
LYS
41
n
41
LYS
41
B
PRO
42
n
42
PRO
42
B
VAL
43
n
43
VAL
43
B
ASN
44
n
44
ASN
44
B
THR
45
n
45
THR
45
B
PHE
46
n
46
PHE
46
B
VAL
47
n
47
VAL
47
B
HIS
48
n
48
HIS
48
B
GLU
49
n
49
GLU
49
B
SER
50
n
50
SER
50
B
LEU
51
n
51
LEU
51
B
ALA
52
n
52
ALA
52
B
ASP
53
n
53
ASP
53
B
VAL
54
n
54
VAL
54
B
GLN
55
n
55
GLN
55
B
ALA
56
n
56
ALA
56
B
VAL
57
n
57
VAL
57
B
CYS
58
n
58
CYS
58
B
SER
59
n
59
SER
59
B
GLN
60
n
60
GLN
60
B
LYS
61
n
61
LYS
61
B
ASN
62
n
62
ASN
62
B
VAL
63
n
63
VAL
63
B
ALA
64
n
64
ALA
64
B
CYS
65
n
65
CYS
65
B
LYS
66
n
66
LYS
66
B
ASN
67
n
67
ASN
67
B
GLY
68
n
68
GLY
68
B
GLN
69
n
69
GLN
69
B
THR
70
n
70
THR
70
B
ASN
71
n
71
ASN
71
B
CYS
72
n
72
CYS
72
B
TYR
73
n
73
TYR
73
B
GLN
74
n
74
GLN
74
B
SER
75
n
75
SER
75
B
TYR
76
n
76
TYR
76
B
SER
77
n
77
SER
77
B
THR
78
n
78
THR
78
B
MET
79
n
79
MET
79
B
SER
80
n
80
SER
80
B
ILE
81
n
81
ILE
81
B
THR
82
n
82
THR
82
B
ASP
83
n
83
ASP
83
B
CYS
84
n
84
CYS
84
B
ARG
85
n
85
ARG
85
B
GLU
86
n
86
GLU
86
B
THR
87
n
87
THR
87
B
GLY
88
n
88
GLY
88
B
SER
89
n
89
SER
89
B
SER
90
n
90
SER
90
B
LYS
91
n
91
LYS
91
B
TYR
92
n
92
TYR
92
B
PRO
93
n
93
PRO
93
B
ASN
94
n
94
ASN
94
B
CYS
95
n
95
CYS
95
B
ALA
96
n
96
ALA
96
B
TYR
97
n
97
TYR
97
B
LYS
98
n
98
LYS
98
B
THR
99
n
99
THR
99
B
THR
100
n
100
THR
100
B
GLN
101
n
101
GLN
101
B
ALA
102
n
102
ALA
102
B
ASN
103
n
103
ASN
103
B
LYS
104
n
104
LYS
104
B
HIS
105
n
105
HIS
105
B
ILE
106
n
106
ILE
106
B
ILE
107
n
107
ILE
107
B
VAL
108
n
108
VAL
108
B
ALA
109
n
109
ALA
109
B
CYS
110
n
110
CYS
110
B
GLU
111
n
111
GLU
111
B
GLY
112
n
112
GLY
112
B
ASN
113
n
113
ASN
113
B
PRO
114
n
114
PRO
114
B
TYR
115
n
115
TYR
115
B
VAL
116
n
116
VAL
116
B
PRO
117
n
117
PRO
117
B
VAL
118
n
118
VAL
118
B
HIS
119
n
119
HIS
119
B
PHE
120
n
120
PHE
120
B
ASP
121
n
121
ASP
121
B
ALA
122
n
122
ALA
122
B
SER
123
n
123
SER
123
B
VAL
124
n
124
VAL
124
B
author_and_software_defined_assembly
PISA
1
monomeric
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
PHE
46
A
O
PHE
46
A
N
THR
82
A
N
THR
82
A
O
ILE
81
A
O
ILE
81
A
N
ALA
102
A
N
ALA
102
1
A
A
O
O
HOH
HOH
204
205
2.09
1
A
A
O
O
HOH
HOH
164
215
2.15
1_555
1_565
1
A
HIS
48
-101.51
63.08
1
A
GLN
60
-95.57
-138.12
1
A
ASN
71
-93.34
32.37
1
B
HIS
48
-106.02
60.12
1
B
GLN
60
-105.85
-136.25
1
B
ASN
71
-99.70
30.21
PARHCSDX.PRO
TOPHCSDX.PRO
22.3
DISORDERED REGIONS WERE MODELED STEREOCHEMICALLY.
0.266
0.008
0.211
0.211
1.7
8.0
1189
24566
4.8
90.4
RANDOM
10000000.00
0.00100
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB ENTRY 3RN3
0.24
0.23
5.00
0.14
0.12
1.7
8.0
162
2126
62
0
1902
0.009
1.4
25.0
1.22
1.56
1.50
2.62
2.00
2.54
2.00
4.01
2.50
0.317
0.024
0.305
1.81
181
3233
6
5.3
82.4
18.7
1.7
30.0
1AFK
24687
0.
0.057
1
9.2
3.0
91.4
1.7
1.77
1.95
0.339
1.8
82.4
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
refinement
X-PLOR
3.1
CRYSTAL STRUCTURE OF RIBONUCLEASE A IN COMPLEX WITH 5'-DIPHOSPHOADENOSINE-3'-PHOSPHATE
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
THR
3
A
THR
3
HELX_P
A
MET
13
A
MET
13
1
H1
11
A
ASN
24
A
ASN
24
HELX_P
A
ASN
34
A
ASN
34
1
H2
11
A
SER
50
A
SER
50
HELX_P
A
GLN
60
A
GLN
60
1
H3
11
disulf
2.030
A
CYS
26
A
SG
CYS
26
1_555
A
CYS
84
A
SG
CYS
84
1_555
disulf
2.026
A
CYS
40
A
SG
CYS
40
1_555
A
CYS
95
A
SG
CYS
95
1_555
disulf
2.021
A
CYS
58
A
SG
CYS
58
1_555
A
CYS
110
A
SG
CYS
110
1_555
disulf
2.028
A
CYS
65
A
SG
CYS
65
1_555
A
CYS
72
A
SG
CYS
72
1_555
disulf
2.034
B
CYS
26
B
SG
CYS
26
1_555
B
CYS
84
B
SG
CYS
84
1_555
disulf
2.021
B
CYS
40
B
SG
CYS
40
1_555
B
CYS
95
B
SG
CYS
95
1_555
disulf
2.021
B
CYS
58
B
SG
CYS
58
1_555
B
CYS
110
B
SG
CYS
110
1_555
disulf
2.022
B
CYS
65
B
SG
CYS
65
1_555
B
CYS
72
B
SG
CYS
72
1_555
HYDROLASE
HYDROLASE, RIBONUCLEASE, ENDONUCLEASE, NUCLEOTIDE INHIBITOR
A
TYR
92
A
TYR
92
1
A
PRO
93
A
PRO
93
0.22
A
ASN
113
A
ASN
113
1
A
PRO
114
A
PRO
114
0.12
B
TYR
92
B
TYR
92
1
B
PRO
93
B
PRO
93
0.50
B
ASN
113
B
ASN
113
1
B
PRO
114
B
PRO
114
0.20
given
-0.594980
-0.803215
0.029055
0.778105
-0.584684
-0.229561
0.201375
-0.113976
0.972860
28.33654
-18.22802
-27.35689
RNAS1_BOVIN
UNP
1
1
P61823
MALKSLVLLSLLVLVLLLVRVQPSLGKETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADV
QAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
27
150
1AFK
1
124
P61823
A
1
1
124
27
150
1AFK
1
124
P61823
B
1
1
124
3
anti-parallel
anti-parallel
A
PRO
42
A
PRO
42
A
HIS
48
A
HIS
48
A
ASN
71
A
ASN
71
A
TYR
92
A
TYR
92
A
ASN
94
A
ASN
94
A
CYS
110
A
CYS
110
PPA3'-P BINDS TO THE CAT SITE.
Unknown
6
PPA3'-P BINDS TO THE CAT SITE.
Unknown
6
BINDING SITE FOR RESIDUE PAP A 125
A
PAP
125
Software
19
BINDING SITE FOR RESIDUE PAP B 125
B
PAP
125
Software
16
A
LYS
7
A
LYS
7
6
1_555
A
GLN
11
A
GLN
11
6
1_555
A
HIS
12
A
HIS
12
6
1_555
A
ASN
67
A
ASN
67
6
1_555
A
HIS
119
A
HIS
119
6
1_555
A
PHE
120
A
PHE
120
6
1_555
B
LYS
7
B
LYS
7
6
1_555
B
GLN
11
B
GLN
11
6
1_555
B
HIS
12
B
HIS
12
6
1_555
B
ASN
67
B
ASN
67
6
1_555
B
HIS
119
B
HIS
119
6
1_555
B
PHE
120
B
PHE
120
6
1_555
A
ALA
4
A
ALA
4
19
1_555
A
LYS
7
A
LYS
7
19
1_555
A
GLN
11
A
GLN
11
19
1_555
A
HIS
12
A
HIS
12
19
1_555
A
LYS
41
A
LYS
41
19
1_555
A
CYS
65
A
CYS
65
19
1_555
A
ASN
67
A
ASN
67
19
1_555
A
GLN
69
A
GLN
69
19
1_555
A
ASN
71
A
ASN
71
19
1_555
A
ALA
109
A
ALA
109
19
1_555
A
GLU
111
A
GLU
111
19
1_555
A
VAL
118
A
VAL
118
19
1_555
A
HIS
119
A
HIS
119
19
1_555
A
PHE
120
A
PHE
120
19
1_555
A
HOH
197
E
HOH
19
1_555
A
HOH
200
E
HOH
19
1_555
A
HOH
218
E
HOH
19
1_555
B
THR
70
B
THR
70
19
4_545
B
GLY
88
B
GLY
88
19
3_545
B
ALA
4
B
ALA
4
16
1_555
B
LYS
7
B
LYS
7
16
1_555
B
GLN
11
B
GLN
11
16
1_555
B
HIS
12
B
HIS
12
16
1_555
B
LYS
41
B
LYS
41
16
1_555
B
CYS
65
B
CYS
65
16
1_555
B
ASN
67
B
ASN
67
16
1_555
B
GLN
69
B
GLN
69
16
1_555
B
ASN
71
B
ASN
71
16
1_555
B
ALA
109
B
ALA
109
16
1_555
B
VAL
118
B
VAL
118
16
1_555
B
HIS
119
B
HIS
119
16
1_555
B
PHE
120
B
PHE
120
16
1_555
B
HOH
160
F
HOH
16
1_555
B
HOH
161
F
HOH
16
1_555
B
HOH
181
F
HOH
16
1_555
5
C 1 2 1