1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Mackenzie, K.R. Prestegard, J.H. Engelman, D.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Science SCIEAS 0038 0036-8075 276 131 133 10.1126/science.276.5309.131 9082985 A transmembrane helix dimer: structure and implications. 1997 New Haven : Yale University (Thesis) US Thesis, Yale University 2144 Structure Determination of the Dimeric Membrane Spanning Domain of Glycophorin a in Detergent Micelles by Triple Resonance Nuclear Magnetic Resonance Spectroscopy 1996 NE J.Biomol.NMR JBNME9 0800 0925-2738 7 256 Leucine Side-Chain Rotamers in a Glycophorin a Transmembrane Peptide as Revealed by Three-Bond Carbon-Carbon Couplings and 13C Chemical Shifts 1996 10.2210/pdb1afo/pdb pdb_00001afo 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 4454.414 GLYCOPHORIN A TRANSMEMBRANE PEPTIDE 2 man polymer no no VQLAHHFSEPEITLIIFGVMAGVIGTILLISYGIRRLIKK VQLAHHFSEPEITLIIFGVMAGVIGTILLISYGIRRLIKK A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo MG-T7 Escherichia sample ERYTHROCYTE PLASMA MEMBRANE 9606 PLASMA Homo sapiens 562 Escherichia coli MG-T7 PET3A database_2 pdbx_database_status pdbx_nmr_software pdbx_nmr_spectrometer pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Other 1 0 1997-09-17 1 1 2008-03-24 1 2 2011-07-13 1 3 2021-10-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model Y BNL 1997-03-11 REL REL LEAST RESTRAINT VIOLATIONS 38 20 HNCA CBCACONH HCCH-TOCSY 15N NOESY-HSQC 13C NOESY-HSQC HNHA SPIN-ECHO DIFF CT HSQC 6.0 313 K DISTANCE GEOMETRY SIMULATED ANNEALING HYBRID BRUNGER refinement X-PLOR 3.1 BRUNGER structure calculation X-PLOR 3.1 500 GE OMEGA 600 Varian VARIAN VAL 62 n 1 VAL 62 A GLN 63 n 2 GLN 63 A LEU 64 n 3 LEU 64 A ALA 65 n 4 ALA 65 A HIS 66 n 5 HIS 66 A HIS 67 n 6 HIS 67 A PHE 68 n 7 PHE 68 A SER 69 n 8 SER 69 A GLU 70 n 9 GLU 70 A PRO 71 n 10 PRO 71 A GLU 72 n 11 GLU 72 A ILE 73 n 12 ILE 73 A THR 74 n 13 THR 74 A LEU 75 n 14 LEU 75 A ILE 76 n 15 ILE 76 A ILE 77 n 16 ILE 77 A PHE 78 n 17 PHE 78 A GLY 79 n 18 GLY 79 A VAL 80 n 19 VAL 80 A MET 81 n 20 MET 81 A ALA 82 n 21 ALA 82 A GLY 83 n 22 GLY 83 A VAL 84 n 23 VAL 84 A ILE 85 n 24 ILE 85 A GLY 86 n 25 GLY 86 A THR 87 n 26 THR 87 A ILE 88 n 27 ILE 88 A LEU 89 n 28 LEU 89 A LEU 90 n 29 LEU 90 A ILE 91 n 30 ILE 91 A SER 92 n 31 SER 92 A TYR 93 n 32 TYR 93 A GLY 94 n 33 GLY 94 A ILE 95 n 34 ILE 95 A ARG 96 n 35 ARG 96 A ARG 97 n 36 ARG 97 A LEU 98 n 37 LEU 98 A ILE 99 n 38 ILE 99 A LYS 100 n 39 LYS 100 A LYS 101 n 40 LYS 101 A VAL 62 n 1 VAL 62 B GLN 63 n 2 GLN 63 B LEU 64 n 3 LEU 64 B ALA 65 n 4 ALA 65 B HIS 66 n 5 HIS 66 B HIS 67 n 6 HIS 67 B PHE 68 n 7 PHE 68 B SER 69 n 8 SER 69 B GLU 70 n 9 GLU 70 B PRO 71 n 10 PRO 71 B GLU 72 n 11 GLU 72 B ILE 73 n 12 ILE 73 B THR 74 n 13 THR 74 B LEU 75 n 14 LEU 75 B ILE 76 n 15 ILE 76 B ILE 77 n 16 ILE 77 B PHE 78 n 17 PHE 78 B GLY 79 n 18 GLY 79 B VAL 80 n 19 VAL 80 B MET 81 n 20 MET 81 B ALA 82 n 21 ALA 82 B GLY 83 n 22 GLY 83 B VAL 84 n 23 VAL 84 B ILE 85 n 24 ILE 85 B GLY 86 n 25 GLY 86 B THR 87 n 26 THR 87 B ILE 88 n 27 ILE 88 B LEU 89 n 28 LEU 89 B LEU 90 n 29 LEU 90 B ILE 91 n 30 ILE 91 B SER 92 n 31 SER 92 B TYR 93 n 32 TYR 93 B GLY 94 n 33 GLY 94 B ILE 95 n 34 ILE 95 B ARG 96 n 35 ARG 96 B ARG 97 n 36 ARG 97 B LEU 98 n 37 LEU 98 B ILE 99 n 38 ILE 99 B LYS 100 n 39 LYS 100 B LYS 101 n 40 LYS 101 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 identity operation 0.0000000000 0.0000000000 0.0000000000 2 A A O H ARG LYS 96 100 1.49 2 B B O H GLU GLU 70 72 1.55 2 B B HE21 O GLN LEU 63 64 1.60 3 B B O HG1 PRO THR 71 74 1.47 3 B B O H ARG LYS 96 100 1.54 4 A A O H ARG LYS 96 100 1.52 6 B B O H ARG LYS 96 100 1.60 9 B B O H ILE ILE 73 77 1.56 10 B B O H GLU GLU 70 72 1.56 11 A A O H ARG LYS 96 100 1.54 11 B B O H GLU GLU 70 72 1.58 13 A A O H GLU GLU 70 72 1.56 19 A A O H ARG LYS 96 100 1.58 19 A A O H GLU GLU 70 72 1.58 20 B B HH21 OXT ARG LYS 97 101 1.58 1 A ARG 96 0.309 SIDE CHAIN 1 A ARG 97 0.236 SIDE CHAIN 1 B ARG 96 0.254 SIDE CHAIN 1 B ARG 97 0.314 SIDE CHAIN 2 A ARG 96 0.228 SIDE CHAIN 2 A ARG 97 0.181 SIDE CHAIN 2 B ARG 96 0.186 SIDE CHAIN 2 B ARG 97 0.306 SIDE CHAIN 3 A ARG 96 0.203 SIDE CHAIN 3 A ARG 97 0.273 SIDE CHAIN 3 B ARG 96 0.317 SIDE CHAIN 3 B ARG 97 0.300 SIDE CHAIN 4 A ARG 96 0.125 SIDE CHAIN 4 A ARG 97 0.312 SIDE CHAIN 4 B ARG 96 0.304 SIDE CHAIN 4 B ARG 97 0.241 SIDE CHAIN 5 A ARG 96 0.288 SIDE CHAIN 5 A ARG 97 0.171 SIDE CHAIN 5 B ARG 96 0.296 SIDE CHAIN 5 B ARG 97 0.232 SIDE CHAIN 6 A ARG 96 0.316 SIDE CHAIN 6 A ARG 97 0.201 SIDE CHAIN 6 B ARG 96 0.265 SIDE CHAIN 6 B ARG 97 0.255 SIDE CHAIN 7 A ARG 96 0.268 SIDE CHAIN 7 A ARG 97 0.245 SIDE CHAIN 7 B ARG 96 0.285 SIDE CHAIN 7 B ARG 97 0.280 SIDE CHAIN 8 A ARG 96 0.239 SIDE CHAIN 8 A ARG 97 0.317 SIDE CHAIN 8 B ARG 96 0.306 SIDE CHAIN 8 B ARG 97 0.298 SIDE CHAIN 9 A ARG 96 0.170 SIDE CHAIN 9 A ARG 97 0.280 SIDE CHAIN 9 B ARG 96 0.301 SIDE CHAIN 9 B ARG 97 0.193 SIDE CHAIN 10 A ARG 96 0.232 SIDE CHAIN 10 A ARG 97 0.251 SIDE CHAIN 10 B ARG 96 0.316 SIDE CHAIN 10 B ARG 97 0.281 SIDE CHAIN 11 A ARG 96 0.194 SIDE CHAIN 11 A ARG 97 0.272 SIDE CHAIN 11 B ARG 96 0.237 SIDE CHAIN 11 B ARG 97 0.233 SIDE CHAIN 12 A ARG 96 0.297 SIDE CHAIN 12 A ARG 97 0.273 SIDE CHAIN 12 B ARG 96 0.311 SIDE CHAIN 12 B ARG 97 0.317 SIDE CHAIN 13 A ARG 96 0.276 SIDE CHAIN 13 A ARG 97 0.307 SIDE CHAIN 13 B ARG 96 0.267 SIDE CHAIN 13 B ARG 97 0.313 SIDE CHAIN 14 A ARG 96 0.145 SIDE CHAIN 14 A ARG 97 0.315 SIDE CHAIN 14 B ARG 96 0.234 SIDE CHAIN 14 B ARG 97 0.305 SIDE CHAIN 15 A ARG 96 0.289 SIDE CHAIN 15 A ARG 97 0.227 SIDE CHAIN 15 B ARG 96 0.204 SIDE CHAIN 16 A ARG 96 0.228 SIDE CHAIN 16 A ARG 97 0.272 SIDE CHAIN 16 B ARG 96 0.316 SIDE CHAIN 16 B ARG 97 0.258 SIDE CHAIN 17 A ARG 96 0.295 SIDE CHAIN 17 A ARG 97 0.250 SIDE CHAIN 17 B ARG 96 0.317 SIDE CHAIN 17 B ARG 97 0.312 SIDE CHAIN 18 A ARG 96 0.308 SIDE CHAIN 18 A ARG 97 0.257 SIDE CHAIN 18 B ARG 96 0.081 SIDE CHAIN 18 B ARG 97 0.260 SIDE CHAIN 19 A ARG 96 0.215 SIDE CHAIN 19 A ARG 97 0.250 SIDE CHAIN 19 B ARG 96 0.308 SIDE CHAIN 19 B ARG 97 0.297 SIDE CHAIN 20 A ARG 96 0.291 SIDE CHAIN 20 A ARG 97 0.295 SIDE CHAIN 20 B ARG 96 0.314 SIDE CHAIN 20 B ARG 97 0.307 SIDE CHAIN 1 A LEU 64 46.11 -165.82 1 A ALA 65 -163.00 31.32 1 A HIS 67 170.12 -53.27 1 A SER 69 51.29 174.92 1 A ILE 99 -82.55 -112.97 1 A LYS 100 47.63 -174.81 1 B HIS 66 77.93 114.11 1 B HIS 67 168.20 38.02 1 B PHE 68 -141.98 -88.24 1 B GLU 72 -66.30 -73.71 1 B ILE 99 94.28 102.18 2 A GLN 63 179.89 143.07 2 A ALA 65 64.15 60.50 2 A HIS 67 -152.35 74.19 2 A PHE 68 -58.74 84.37 2 A SER 69 -104.06 -152.28 2 A GLU 70 168.68 -55.38 2 A PRO 71 -58.12 83.54 2 A GLU 72 -67.51 -72.18 2 B LEU 64 67.71 159.23 2 B ALA 65 -165.87 68.97 2 B SER 69 -150.57 -152.33 2 B GLU 70 73.34 98.23 2 B PRO 71 -62.28 58.48 2 B GLU 72 -65.15 -74.95 2 B LYS 100 -115.08 -162.83 3 A LEU 64 -53.98 173.51 3 A ALA 65 -166.49 104.28 3 A HIS 66 -70.32 -148.84 3 A HIS 67 -65.94 -175.60 3 A SER 69 -46.62 157.82 3 A GLU 72 -63.21 -74.68 3 B HIS 67 -163.84 -169.49 3 B PHE 68 75.94 -56.15 3 B PRO 71 -59.72 106.43 4 A ALA 65 -144.24 24.52 4 A HIS 66 51.41 77.86 4 A HIS 67 -158.88 -55.30 4 A PHE 68 68.38 -62.92 4 A SER 69 76.17 48.12 4 A GLU 70 55.46 101.54 4 A GLU 72 -59.29 -70.77 4 B GLN 63 61.01 167.03 4 B LEU 64 175.80 -28.80 4 B HIS 66 -154.74 63.82 4 B HIS 67 -101.28 69.29 4 B PHE 68 -67.17 90.23 4 B SER 69 75.90 109.37 4 B GLU 72 -48.54 -74.76 4 B ILE 99 -79.71 -131.52 4 B LYS 100 59.47 136.47 5 A HIS 67 67.54 123.75 5 A GLU 70 161.78 -50.03 5 A PRO 71 -61.22 75.96 5 B SER 69 -89.81 36.49 5 B GLU 72 -57.89 -72.16 6 A LEU 64 54.47 -87.37 6 A HIS 66 -56.16 -77.16 6 A HIS 67 -162.02 -69.04 6 A SER 69 -172.98 36.99 6 B SER 69 -144.20 15.12 7 A HIS 66 70.62 -66.05 7 A HIS 67 58.12 -172.80 7 A SER 69 54.67 74.58 7 A LYS 100 -123.02 -163.78 7 B LEU 64 -160.98 34.33 7 B HIS 66 60.92 131.46 7 B GLU 70 163.18 -52.97 8 A GLN 63 57.37 159.64 8 A ALA 65 -114.98 54.16 8 A HIS 67 -68.29 68.72 8 A PRO 71 -59.06 76.13 8 B PHE 68 -116.35 -74.54 8 B SER 69 64.58 125.30 8 B PRO 71 -59.35 96.62 9 A GLN 63 60.44 159.40 9 A ALA 65 73.77 144.06 9 A HIS 66 -147.66 -67.65 9 A HIS 67 -166.88 34.68 9 A PHE 68 65.90 -67.71 9 A GLU 70 166.97 93.05 9 A GLU 72 -64.65 -86.87 9 A ILE 73 -39.51 -39.30 9 B HIS 66 51.85 96.42 9 B HIS 67 -57.73 -72.32 10 A LEU 64 53.03 -87.57 10 A ALA 65 164.68 -22.50 10 A HIS 66 -103.02 -155.28 10 A HIS 67 71.83 157.01 10 A SER 69 -172.78 -170.76 10 B LEU 64 -98.22 37.01 10 B HIS 66 73.63 -150.63 10 B HIS 67 -145.27 -149.79 10 B SER 69 -59.58 -165.27 10 B PRO 71 -62.64 59.21 11 A GLN 63 39.31 96.60 11 A HIS 66 71.04 120.55 11 A HIS 67 -78.74 -154.22 11 A PRO 71 -58.91 73.22 11 A GLU 72 -64.83 -81.32 11 B LEU 64 -144.78 55.48 11 B PRO 71 -65.17 55.57 11 B GLU 72 -72.37 -71.97 11 B ILE 99 -82.27 -119.78 11 B LYS 100 43.38 81.62 12 A LEU 64 80.44 7.16 12 A ALA 65 -90.59 30.46 12 A HIS 67 40.56 96.24 12 A PHE 68 -42.77 164.87 12 A SER 69 -105.85 -94.08 12 A GLU 70 169.83 -57.56 12 A PRO 71 -54.82 -75.20 12 A GLU 72 34.25 -131.50 12 A ILE 99 -82.03 -118.79 12 A LYS 100 61.19 141.12 12 B ALA 65 -95.22 32.63 12 B HIS 67 55.29 72.22 12 B PHE 68 -59.02 -169.29 12 B SER 69 -168.56 -163.20 12 B GLU 72 -45.15 -76.77 12 B ILE 99 -77.06 -125.09 13 A HIS 67 -170.44 -84.00 13 A PRO 71 -63.55 57.73 13 B LEU 64 -49.71 109.35 13 B PHE 68 -61.73 -171.65 14 A GLN 63 -165.59 119.07 14 A PHE 68 -150.10 15.84 14 A ILE 99 -82.77 -103.27 14 B SER 69 170.38 86.16 14 B ILE 99 -76.61 -130.71 14 B LYS 100 56.30 161.51 15 A GLN 63 71.13 172.81 15 A LEU 64 81.34 -4.82 15 A HIS 66 54.74 170.44 15 A HIS 67 -149.20 23.23 15 A PHE 68 51.10 -176.02 15 A SER 69 58.39 86.11 15 A PRO 71 -59.09 92.75 15 A GLU 72 -68.44 -81.23 15 A ILE 99 -78.22 -81.49 15 B HIS 66 170.21 142.61 15 B PHE 68 48.60 -171.04 16 A LEU 64 -93.09 -76.60 16 A HIS 67 -123.99 -79.25 16 A PHE 68 75.45 -175.62 16 A SER 69 -175.55 -167.00 16 A GLU 70 58.17 101.06 16 A ILE 99 -85.63 39.14 16 B HIS 67 66.82 129.98 16 B GLU 70 172.48 -57.17 17 A HIS 66 -163.05 54.97 17 A PHE 68 -69.62 -162.89 17 A GLU 70 46.83 70.46 17 A PRO 71 -60.33 90.83 17 A GLU 72 -64.72 -92.13 17 B GLN 63 -170.51 124.62 17 B HIS 67 -135.08 -57.50 17 B PRO 71 -61.71 64.71 17 B GLU 72 -67.62 -73.86 18 A HIS 66 -114.44 -71.81 18 A HIS 67 169.11 131.93 18 A PHE 68 -164.81 38.40 18 A SER 69 -145.58 -151.78 18 A GLU 70 173.49 -58.00 18 A GLU 72 -65.65 -89.70 18 A ILE 73 -38.91 -38.79 18 B LEU 64 -64.72 75.19 18 B HIS 66 -56.70 177.04 18 B PHE 68 -155.67 59.49 18 B GLU 70 49.41 95.25 18 B PRO 71 -60.53 67.51 18 B GLU 72 -64.67 -72.39 19 A ALA 65 162.33 -22.99 19 A SER 69 70.09 -165.44 19 A PRO 71 -63.95 56.72 19 A GLU 72 -73.04 -72.72 19 B GLN 63 -171.75 143.26 19 B HIS 66 56.28 175.09 19 B HIS 67 -144.15 -49.30 19 B PHE 68 39.41 52.22 19 B SER 69 -118.49 -157.14 19 B LYS 100 -115.84 79.68 20 A GLN 63 71.52 98.43 20 A LEU 64 -118.77 -75.06 20 A HIS 67 -166.94 -150.76 20 A PRO 71 -60.01 76.55 20 A GLU 72 -61.55 -88.30 20 B GLN 63 177.17 166.24 20 B HIS 66 -44.32 167.09 20 B HIS 67 -80.50 -76.23 20 B PHE 68 -88.05 -158.40 model building X-PLOR 3.1 refinement X-PLOR 3.1 phasing X-PLOR 3.1 DIMERIC TRANSMEMBRANE DOMAIN OF HUMAN GLYCOPHORIN A, NMR, 20 STRUCTURES 1 N N 1 N N A GLU 72 A GLU 11 HELX_P A LEU 98 A LEU 37 1 1 27 B GLU 72 B GLU 11 HELX_P B LEU 98 B LEU 37 1 2 27 INTEGRAL MEMBRANE PROTEIN INTEGRAL MEMBRANE PROTEIN, HUMAN GLYCOPHORIN A, TRANSMEMBRANE HELIX INTERACTIONS, MEMBRANE PROTEIN FOLDING GLPA_HUMAN UNP 1 1 P02724 MYGKIIFVLLLSAIVSISASSTTGVAMHTSTSSSVTKSYISSQTNDTHKRDTYAATPRAHEVSEISVRTVYPPEEETGER VQLAHHFSEPEITLIIFGVMAGVIGTILLISYGIRRLIKKSPSDVKPLPSPDTDVPLSSVEIENPETSDQ 81 120 1AFO 62 101 P02724 A 1 1 40 81 120 1AFO 62 101 P02724 B 1 1 40 1 P 1