1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Arnott, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C6 H10 O5
162.141
3,6-anhydro-alpha-L-galactopyranose
3,6-ANHYDRO-L-GALACTOSE; 3,6-anhydro-alpha-L-galactose; 3,6-anhydro-galactose
L-saccharide, alpha linking
C6 H12 O6
180.156
beta-D-galactopyranose
beta-D-galactose; D-galactose; galactose
D-saccharide, beta linking
N
1
R
C
N
2
S
C
N
3
R
C
N
4
R
C
N
5
S
C
N
6
N
C
N
7
N
O
N
8
N
O
N
9
N
O
N
10
N
O
N
11
N
O
N
12
N
H
N
13
N
H
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
H
N
22
R
C
N
23
R
C
N
24
S
C
N
25
R
C
N
26
R
C
N
27
N
C
N
28
N
O
N
29
N
O
N
30
N
O
N
31
N
O
N
32
N
O
N
33
N
O
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
90
269
284
10.1016/0022-2836(74)90372-6
4453017
The agarose double helix and its function in agarose gel structure.
1974
UK
J.Chem.Soc.,Perkin Trans.2
JCPKBH
0188
0300-9580
324
Accurate X-Ray Diffraction Analysis of Fibrous Polysaccharides Containing Pyranose Rings. Part 1. The Linked-Atom Approach.
1972
10.2210/pdb1aga/pdb
pdb_00001aga
.100000
0.000000
0.000000
0.000000
.100000
0.000000
0.000000
0.000000
.100000
0.00000
0.00000
0.00000
0.00000
0.00000
19.00000
936.815
beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose
2
man
branched
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_database_status
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly
pdbx_struct_oper_list
pdbx_unobs_or_zero_occ_atoms
struct_asym
struct_conn
struct_ref
struct_ref_seq
chem_comp
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Version format compliance
Advisory
Atomic model
Data collection
Database references
Derived calculations
Other
Structure summary
Data collection
Database references
Structure summary
1
0
1980-03-28
1
1
2008-03-21
1
2
2011-07-13
2
0
2020-07-29
2
1
2024-02-07
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.name
_chem_comp.type
_pdbx_database_status.process_site
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
A
AGL
6
n
A
AAL
1
A
GAL
5
n
A
GAL
2
A
AGL
4
n
A
AAL
3
A
GAL
3
n
A
GAL
4
A
AGL
2
n
A
AAL
5
A
GAL
1
n
A
GAL
6
B
AGL
6
n
B
AAL
1
B
GAL
5
n
B
GAL
2
B
AGL
4
n
B
AAL
3
B
GAL
3
n
B
GAL
4
B
AGL
2
n
B
AAL
5
B
GAL
1
n
B
GAL
6
DGalpb
b-D-galactopyranose
b-D-Galp
Gal
Y
BNL
1978-05-23
REL
oligosaccharide
WURCS=2.0/2,6,5/[a1221h-1a_1-5_3-6][a2112h-1b_1-5]/1-2-1-2-1-2/a4-b1_b3-c1_c4-d1_d3-e1_e4-f1
1
PDB2Glycan
1.1.0
WURCS
[][<C30O21>]{[(1+1)][b-D-Galp]{}}
1
PDB-CARE
LINUCS
C1
O4
GAL
AAL
2
1
1
O1
HO4
sing
C1
O3
AAL
GAL
3
2
1
O1
HO3
sing
C1
O4
GAL
AAL
4
3
1
O1
HO4
sing
C1
O3
AAL
GAL
5
4
1
O1
HO3
sing
C1
O4
GAL
AAL
6
5
1
O1
HO4
sing
n
n
n
n
n
n
author_defined_assembly
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
O1
AAL
1
A
O1
AAL
1
1
N
1
B
O1
AAL
1
B
O1
AAL
1
1
N
THE TWELVE-RESIDUE CHAIN SEGMENT GIVEN HERE WAS GENERATED
FROM THE PUBLISHED TWO-RESIDUE SEGMENT BY APPLICATION OF
THE CYLINDRICAL-POLAR COORDINATE TRANSFORMATIONS GIVEN IN
THE *JRNL* REFERENCE. THESE WERE CONVERTED TO CARTESIAN
COORDINATES IN THE NORMAL WAY AND THEN TRANSFORMED FROM
PICOMETERS TO ANGSTROMS BY APPLICATION OF THE INVERSE OF
THE *ORIGX* TRANSFORMATION GIVEN BELOW.
3.0
1
3.0
0
126
126
0
0
refinement
A
LINKED-ATOM LEAST-SQUARES MODEL-BUILDING PROCEDURE
THE AGAROSE DOUBLE HELIX AND ITS FUNCTION IN AGAROSE GEL STRUCTURE
1
N
N
1
N
N
covale
1.389
one
A
AAL
1
A
O4
AAL
1_555
A
GAL
2
A
C1
GAL
1_555
covale
1.377
both
A
GAL
2
A
O3
GAL
1_555
A
AAL
3
A
C1
AAL
1_555
covale
1.389
one
A
AAL
3
A
O4
AAL
1_555
A
GAL
4
A
C1
GAL
1_555
covale
1.378
both
A
GAL
4
A
O3
GAL
1_555
A
AAL
5
A
C1
AAL
1_555
covale
1.389
one
A
AAL
5
A
O4
AAL
1_555
A
GAL
6
A
C1
GAL
1_555
covale
1.389
one
B
AAL
1
B
O4
AAL
1_555
B
GAL
2
B
C1
GAL
1_555
covale
1.378
both
B
GAL
2
B
O3
GAL
1_555
B
AAL
3
B
C1
AAL
1_555
covale
1.389
one
B
AAL
3
B
O4
AAL
1_555
B
GAL
4
B
C1
GAL
1_555
covale
1.377
both
B
GAL
4
B
O3
GAL
1_555
B
AAL
5
B
C1
AAL
1_555
covale
1.389
one
B
AAL
5
B
O4
AAL
1_555
B
GAL
6
B
C1
GAL
1_555
TEXTURE OF CONNECTIVE TISSUE
TEXTURE OF CONNECTIVE TISSUE
1
P 1