0.007955 0.000000 0.005107 0.000000 0.010965 0.000000 0.000000 0.000000 0.016015 0.00000 0.00000 0.00000 Kosa, P.F. Ghosh, G. Dedecker, B.S. Sigler, P.B. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 122.70 90.00 125.700 91.200 74.200 C9 H12 I N2 O8 P 434.078 n 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE DNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 94 6042 6047 10.1073/pnas.94.12.6042 9177165 The 2.1-A crystal structure of an archaeal preinitiation complex: TATA-box-binding protein/transcription factor (II)B core/TATA-box. 1997 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.00 1 MIRRORS CCD 1996-01 SINGLE WAVELENGTH M x-ray 1 1.0 A1 CHESS SYNCHROTRON CHESS BEAMLINE A1 5384.125 DNA (5'-D(*AP*AP*CP*TP*TP*AP*CP*TP*TP*TP*(5IU)P*(5IU)P*AP*AP*AP*GP*C)-3') 1 syn polymer 5249.446 DNA (5'-D(*GP*CP*TP*TP*TP*AP*AP*AP*AP*AP*GP*TP*AP*AP*GP*TP*T )-3') 1 syn polymer 20279.707 PROTEIN (TATA-BINDING PROTEIN) RESIDUES 1 - 181 1 man polymer 22590.379 PROTEIN (TRANSCRIPTION INITIATION FACTOR IIB) C TERMINAL DOMAIN 1 man polymer 18.015 water 288 nat water TBP TFB TFIIB no yes (DA)(DA)(DC)(DT)(DT)(DA)(DC)(DT)(DT)(DT)(5IU)(5IU)(DA)(DA)(DA)(DG)(DC) AACTTACTTTUUAAAGC C polydeoxyribonucleotide no no (DG)(DC)(DT)(DT)(DT)(DA)(DA)(DA)(DA)(DA)(DG)(DT)(DA)(DA)(DG)(DT)(DT) GCTTTAAAAAGTAAGTT E polydeoxyribonucleotide no no MVDMSKVKLRIENIVASVDLFAQLDLEKVLDLCPNSKYNPEEFPGIICHLDDPKVALLIFSSGKLVVTGAKSVQDIERAV AKLAQKLKSIGVKFKRAPQIDVQNMVFSGDIGREFNLDVVALTLPNCEYEPEQFPGVIYRVKEPKSVILLFSSGKIVCSG AKSEADAWEAVRKLLRELDKYL MVDMSKVKLRIENIVASVDLFAQLDLEKVLDLCPNSKYNPEEFPGIICHLDDPKVALLIFSSGKLVVTGAKSVQDIERAV AKLAQKLKSIGVKFKRAPQIDVQNMVFSGDIGREFNLDVVALTLPNCEYEPEQFPGVIYRVKEPKSVILLFSSGKIVCSG AKSEADAWEAVRKLLRELDKYL A polypeptide(L) no no VSDAAERNLAFALSELDRITAQLKLPRHVEEEAARLYREAVRKGLIRGRSIESVMAACVYAACRLLKVPRTLDEIADIAR VDKKEIGRSYRFIARNLNLTPKKLFVKPTDYVNKFADELGLSEKVRRRAIEILDEAYKRGLTSGKSPAGLVAAALYIASL LEGEKRTQREVAEVARVTEVTVRNRYKELVEKLKIKVPIA VSDAAERNLAFALSELDRITAQLKLPRHVEEEAARLYREAVRKGLIRGRSIESVMAACVYAACRLLKVPRTLDEIADIAR VDKKEIGRSYRFIARNLNLTPKKLFVKPTDYVNKFADELGLSEKVRRRAIEILDEAYKRGLTSGKSPAGLVAAALYIASL LEGEKRTQREVAEVARVTEVTVRNRYKELVEKLKIKVPIA B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Pyrococcus Escherichia Escherichia coli sample 2262 Pyrococcus woesei 469008 Escherichia coli BL21(DE3) BL21 DE3 PET11A Pyrococcus Escherichia Escherichia coli sample 2262 Pyrococcus woesei 469008 Escherichia coli BL21(DE3) BL21 DE3 PET11A 1 3.34 64.0000 VAPOR DIFFUSION, HANGING DROP 7.4 HANGING DROP METHOD 8% PEG 8000, 200 MM POTASSIUM PHOSPHATE PH 7.4., vapor diffusion - hanging drop WATER 1 K PHOSPHATE 1 PEG 8000 1 1.560 1 20 C 1401 E 1434 -6.788 C_DA1401:DT1434_E 1 -9.244 0.306 0.292 -0.137 3.037 1 20 C 1402 E 1433 0.597 C_DA1402:DT1433_E 2 -10.411 0.072 0.117 -0.511 0.435 1 19 C 1403 E 1432 5.113 C_DC1403:DG1432_E 3 -10.751 -0.032 0.456 -0.339 -6.699 1 20 C 1404 E 1431 4.123 C_DT1404:DA1431_E 4 -10.809 0.087 0.141 -0.399 5.442 1 20 C 1405 E 1430 2.860 C_DT1405:DA1430_E 5 -8.185 -0.351 0.086 -0.083 0.049 1 20 C 1406 E 1429 2.074 C_DA1406:DT1429_E 6 -8.671 0.309 -0.017 0.023 0.857 1 19 C 1407 E 1428 -2.949 C_DC1407:DG1428_E 7 -12.438 0.161 -0.234 -0.194 -0.711 1 20 C 1408 E 1427 4.696 C_DT1408:DA1427_E 8 2.490 0.115 0.134 -0.157 -42.648 1 20 C 1409 E 1426 15.588 C_DT1409:DA1426_E 9 -12.677 0.060 0.476 0.185 -29.885 1 20 C 1410 E 1425 4.300 C_DT1410:DA1425_E 10 -7.744 -0.252 -0.060 -0.034 -19.768 1 20 C 1411 E 1424 8.927 C_5IU1411:DA1424_E 11 5.714 -0.173 0.112 0.008 -2.364 1 20 C 1412 E 1423 3.125 C_5IU1412:DA1423_E 12 7.834 0.107 -0.156 -0.082 30.567 1 20 C 1413 E 1422 3.257 C_DA1413:DT1422_E 13 -5.989 0.027 0.147 -0.156 48.990 1 20 C 1414 E 1421 11.169 C_DA1414:DT1421_E 14 -6.672 -0.184 0.466 0.243 -6.301 1 20 C 1415 E 1420 -2.272 C_DA1415:DT1420_E 15 16.595 -0.139 -0.536 -0.119 15.437 1 19 C 1416 E 1419 4.745 C_DG1416:DC1419_E 16 4.788 -0.271 0.217 -0.090 13.459 1 19 C 1417 E 1418 -0.922 C_DC1417:DG1418_E 17 -10.509 -0.236 -0.114 -0.235 3.174 34.292 C C 1401 1402 2.815 E E 1434 1433 3.236 1.656 -0.059 -0.708 CC_DA1401DA1402:DT1433DT1434_EE 1 3.843 -6.532 34.044 -1.457 0.694 3.070 35.546 C C 1402 1403 11.235 E E 1433 1432 3.298 6.814 0.293 -0.774 CC_DA1402DC1403:DG1432DT1433_EE 2 -2.440 4.023 34.824 -2.246 -0.831 3.454 36.408 C C 1403 1404 7.779 E E 1432 1431 3.471 4.836 0.463 -0.146 CC_DC1403DT1404:DA1431DG1432_EE 3 4.377 -7.041 35.839 -0.951 -0.091 2.886 30.241 C C 1404 1405 6.796 E E 1431 1430 2.946 3.538 0.175 -0.353 CC_DT1404DT1405:DA1430DA1431_EE 4 -0.071 0.136 30.038 -1.317 -0.347 2.956 33.365 C C 1405 1406 14.071 E E 1430 1429 3.275 8.003 0.453 -1.037 CC_DT1405DA1406:DT1429DA1430_EE 5 1.139 -2.003 32.398 -3.091 -0.606 3.225 32.185 C C 1406 1407 -0.537 E E 1429 1428 3.192 -0.297 -0.848 -0.531 CC_DA1406DC1407:DG1428DT1429_EE 6 -1.185 2.138 32.162 -0.906 1.321 3.207 35.799 C C 1407 1408 12.183 E E 1428 1427 3.396 7.438 0.173 -0.598 CC_DC1407DT1408:DA1427DG1428_EE 7 0.008 -0.013 35.043 -2.065 -0.281 3.083 49.386 C C 1408 1409 61.685 E E 1427 1426 5.179 43.156 0.638 0.510 CC_DT1408DT1409:DA1426DA1427_EE 8 0.209 -0.299 24.605 -5.022 -0.737 3.117 29.309 C C 1409 1410 39.686 E E 1426 1425 3.400 18.592 -0.478 0.767 CC_DT1409DT1410:DA1425DA1426_EE 9 0.803 -1.713 22.744 -3.016 1.141 3.254 28.889 C C 1410 1411 52.619 E E 1425 1424 3.681 22.791 0.495 1.356 CC_DT14105IU1411:DA1424DA1425_EE 10 -3.394 7.836 17.544 -4.034 -1.997 2.997 25.718 C C 1411 1412 53.644 E E 1424 1423 3.244 20.640 -0.491 1.340 CC_5IU14115IU1412:DA1423DA1424_EE 11 1.187 -3.086 15.381 -3.975 1.504 3.418 22.723 C C 1412 1413 27.303 E E 1423 1422 2.842 10.368 -0.391 1.975 CC_5IU1412DA1413:DT1422DA1423_EE 12 0.509 -1.340 20.241 1.221 1.179 2.894 27.117 C C 1413 1414 39.055 E E 1422 1421 3.280 16.987 0.460 0.535 CC_DA1413DA1414:DT1421DT1422_EE 13 -0.695 1.597 21.204 -3.427 -1.168 3.185 61.343 C C 1414 1415 69.842 E E 1421 1420 5.984 57.220 -1.423 0.928 CC_DA1414DA1415:DT1420DT1421_EE 14 0.744 -0.909 23.096 -5.027 1.472 2.515 22.953 C C 1415 1416 6.105 E E 1420 1419 2.953 2.393 0.826 -0.756 CC_DA1415DG1416:DC1419DT1420_EE 15 -6.428 16.398 21.917 -2.624 -4.020 3.390 36.555 C C 1416 1417 -0.309 E E 1419 1418 3.385 -0.194 -0.467 -0.998 CC_DG1416DC1417:DG1418DC1419_EE 16 0.007 -0.011 36.555 -1.564 0.746 repository Initial release Version format compliance Version format compliance 1 0 1997-07-07 1 1 2008-05-22 1 2 2011-07-13 BNL Y NDB 1997-04-24 REL REL HOH water HOH 1507 5 HOH HOH 1507 C HOH 1509 5 HOH HOH 1509 C HOH 1511 5 HOH HOH 1511 C HOH 1524 5 HOH HOH 1524 C HOH 1531 5 HOH HOH 1531 C HOH 1532 5 HOH HOH 1532 C HOH 1539 5 HOH HOH 1539 C HOH 1551 5 HOH HOH 1551 C HOH 1558 5 HOH HOH 1558 C HOH 1566 5 HOH HOH 1566 C HOH 1567 5 HOH HOH 1567 C HOH 1570 5 HOH HOH 1570 C HOH 1580 5 HOH HOH 1580 C HOH 1581 5 HOH HOH 1581 C HOH 1586 5 HOH HOH 1586 C HOH 1597 5 HOH HOH 1597 C HOH 1609 5 HOH HOH 1609 C HOH 1615 5 HOH HOH 1615 C HOH 1635 5 HOH HOH 1635 C HOH 1636 5 HOH HOH 1636 C HOH 1646 5 HOH HOH 1646 C HOH 1648 5 HOH HOH 1648 C HOH 1651 5 HOH HOH 1651 C HOH 1660 5 HOH HOH 1660 C HOH 1667 5 HOH HOH 1667 C HOH 1674 5 HOH HOH 1674 C HOH 1677 5 HOH HOH 1677 C HOH 1688 5 HOH HOH 1688 C HOH 1696 5 HOH HOH 1696 C HOH 1728 5 HOH HOH 1728 C HOH 1741 5 HOH HOH 1741 C HOH 1744 5 HOH HOH 1744 C HOH 1746 5 HOH HOH 1746 C HOH 1752 5 HOH HOH 1752 C HOH 1768 5 HOH HOH 1768 C HOH 1786 5 HOH HOH 1786 C HOH 1500 5 HOH HOH 1500 E HOH 1505 5 HOH HOH 1505 E HOH 1513 5 HOH HOH 1513 E HOH 1517 5 HOH HOH 1517 E HOH 1522 5 HOH HOH 1522 E HOH 1530 5 HOH HOH 1530 E HOH 1534 5 HOH HOH 1534 E HOH 1537 5 HOH HOH 1537 E HOH 1538 5 HOH HOH 1538 E HOH 1544 5 HOH HOH 1544 E HOH 1553 5 HOH HOH 1553 E HOH 1563 5 HOH HOH 1563 E HOH 1565 5 HOH HOH 1565 E HOH 1572 5 HOH HOH 1572 E HOH 1583 5 HOH HOH 1583 E HOH 1585 5 HOH HOH 1585 E HOH 1593 5 HOH HOH 1593 E HOH 1596 5 HOH HOH 1596 E HOH 1601 5 HOH HOH 1601 E HOH 1604 5 HOH HOH 1604 E HOH 1606 5 HOH HOH 1606 E HOH 1612 5 HOH HOH 1612 E HOH 1616 5 HOH HOH 1616 E HOH 1628 5 HOH HOH 1628 E HOH 1633 5 HOH HOH 1633 E HOH 1649 5 HOH HOH 1649 E HOH 1652 5 HOH HOH 1652 E HOH 1666 5 HOH HOH 1666 E HOH 1668 5 HOH HOH 1668 E HOH 1669 5 HOH HOH 1669 E HOH 1673 5 HOH HOH 1673 E HOH 1682 5 HOH HOH 1682 E HOH 1684 5 HOH HOH 1684 E HOH 1694 5 HOH HOH 1694 E HOH 1703 5 HOH HOH 1703 E HOH 1708 5 HOH HOH 1708 E HOH 1716 5 HOH HOH 1716 E HOH 1719 5 HOH HOH 1719 E HOH 1724 5 HOH HOH 1724 E HOH 1731 5 HOH HOH 1731 E HOH 1735 5 HOH HOH 1735 E HOH 1756 5 HOH HOH 1756 E HOH 1766 5 HOH HOH 1766 E HOH 1780 5 HOH HOH 1780 E HOH 1782 5 HOH HOH 1782 E HOH 1501 5 HOH HOH 1501 A HOH 1503 5 HOH HOH 1503 A HOH 1504 5 HOH HOH 1504 A HOH 1508 5 HOH HOH 1508 A HOH 1510 5 HOH HOH 1510 A HOH 1512 5 HOH HOH 1512 A HOH 1515 5 HOH HOH 1515 A HOH 1516 5 HOH HOH 1516 A HOH 1518 5 HOH HOH 1518 A HOH 1519 5 HOH HOH 1519 A HOH 1520 5 HOH HOH 1520 A HOH 1521 5 HOH HOH 1521 A HOH 1523 5 HOH HOH 1523 A HOH 1525 5 HOH HOH 1525 A HOH 1526 5 HOH HOH 1526 A HOH 1527 5 HOH HOH 1527 A HOH 1528 5 HOH HOH 1528 A HOH 1529 5 HOH HOH 1529 A HOH 1535 5 HOH HOH 1535 A HOH 1536 5 HOH HOH 1536 A HOH 1540 5 HOH HOH 1540 A HOH 1542 5 HOH HOH 1542 A HOH 1545 5 HOH HOH 1545 A HOH 1546 5 HOH HOH 1546 A HOH 1548 5 HOH HOH 1548 A HOH 1550 5 HOH HOH 1550 A HOH 1554 5 HOH HOH 1554 A HOH 1555 5 HOH HOH 1555 A HOH 1556 5 HOH HOH 1556 A HOH 1557 5 HOH HOH 1557 A HOH 1559 5 HOH HOH 1559 A HOH 1560 5 HOH HOH 1560 A HOH 1564 5 HOH HOH 1564 A HOH 1568 5 HOH HOH 1568 A HOH 1569 5 HOH HOH 1569 A HOH 1571 5 HOH HOH 1571 A HOH 1573 5 HOH HOH 1573 A HOH 1574 5 HOH HOH 1574 A HOH 1575 5 HOH HOH 1575 A HOH 1576 5 HOH HOH 1576 A HOH 1577 5 HOH HOH 1577 A HOH 1578 5 HOH HOH 1578 A HOH 1579 5 HOH HOH 1579 A HOH 1582 5 HOH HOH 1582 A HOH 1587 5 HOH HOH 1587 A HOH 1589 5 HOH HOH 1589 A HOH 1591 5 HOH HOH 1591 A HOH 1592 5 HOH HOH 1592 A HOH 1598 5 HOH HOH 1598 A HOH 1599 5 HOH HOH 1599 A HOH 1600 5 HOH HOH 1600 A HOH 1602 5 HOH HOH 1602 A HOH 1603 5 HOH HOH 1603 A HOH 1605 5 HOH HOH 1605 A HOH 1610 5 HOH HOH 1610 A HOH 1611 5 HOH HOH 1611 A HOH 1617 5 HOH HOH 1617 A HOH 1618 5 HOH HOH 1618 A HOH 1620 5 HOH HOH 1620 A HOH 1621 5 HOH HOH 1621 A HOH 1623 5 HOH HOH 1623 A HOH 1625 5 HOH HOH 1625 A HOH 1626 5 HOH HOH 1626 A HOH 1627 5 HOH HOH 1627 A HOH 1630 5 HOH HOH 1630 A HOH 1631 5 HOH HOH 1631 A HOH 1632 5 HOH HOH 1632 A HOH 1634 5 HOH HOH 1634 A HOH 1638 5 HOH HOH 1638 A HOH 1639 5 HOH HOH 1639 A HOH 1641 5 HOH HOH 1641 A HOH 1642 5 HOH HOH 1642 A HOH 1647 5 HOH HOH 1647 A HOH 1650 5 HOH HOH 1650 A HOH 1654 5 HOH HOH 1654 A HOH 1655 5 HOH HOH 1655 A HOH 1656 5 HOH HOH 1656 A HOH 1657 5 HOH HOH 1657 A HOH 1658 5 HOH HOH 1658 A HOH 1659 5 HOH HOH 1659 A HOH 1662 5 HOH HOH 1662 A HOH 1664 5 HOH HOH 1664 A HOH 1665 5 HOH HOH 1665 A HOH 1670 5 HOH HOH 1670 A HOH 1672 5 HOH HOH 1672 A HOH 1675 5 HOH HOH 1675 A HOH 1676 5 HOH HOH 1676 A HOH 1678 5 HOH HOH 1678 A HOH 1681 5 HOH HOH 1681 A HOH 1683 5 HOH HOH 1683 A HOH 1686 5 HOH HOH 1686 A HOH 1690 5 HOH HOH 1690 A HOH 1693 5 HOH HOH 1693 A HOH 1695 5 HOH HOH 1695 A HOH 1697 5 HOH HOH 1697 A HOH 1699 5 HOH HOH 1699 A HOH 1700 5 HOH HOH 1700 A HOH 1701 5 HOH HOH 1701 A HOH 1704 5 HOH HOH 1704 A HOH 1705 5 HOH HOH 1705 A HOH 1706 5 HOH HOH 1706 A HOH 1707 5 HOH HOH 1707 A HOH 1709 5 HOH HOH 1709 A HOH 1710 5 HOH HOH 1710 A HOH 1711 5 HOH HOH 1711 A HOH 1712 5 HOH HOH 1712 A HOH 1714 5 HOH HOH 1714 A HOH 1717 5 HOH HOH 1717 A HOH 1718 5 HOH HOH 1718 A HOH 1720 5 HOH HOH 1720 A HOH 1722 5 HOH HOH 1722 A HOH 1725 5 HOH HOH 1725 A HOH 1726 5 HOH HOH 1726 A HOH 1727 5 HOH HOH 1727 A HOH 1729 5 HOH HOH 1729 A HOH 1730 5 HOH HOH 1730 A HOH 1734 5 HOH HOH 1734 A HOH 1736 5 HOH HOH 1736 A HOH 1738 5 HOH HOH 1738 A HOH 1739 5 HOH HOH 1739 A HOH 1743 5 HOH HOH 1743 A HOH 1749 5 HOH HOH 1749 A HOH 1750 5 HOH HOH 1750 A HOH 1751 5 HOH HOH 1751 A HOH 1753 5 HOH HOH 1753 A HOH 1754 5 HOH HOH 1754 A HOH 1755 5 HOH HOH 1755 A HOH 1757 5 HOH HOH 1757 A HOH 1758 5 HOH HOH 1758 A HOH 1759 5 HOH HOH 1759 A HOH 1760 5 HOH HOH 1760 A HOH 1761 5 HOH HOH 1761 A HOH 1763 5 HOH HOH 1763 A HOH 1764 5 HOH HOH 1764 A HOH 1765 5 HOH HOH 1765 A HOH 1767 5 HOH HOH 1767 A HOH 1770 5 HOH HOH 1770 A HOH 1772 5 HOH HOH 1772 A HOH 1774 5 HOH HOH 1774 A HOH 1777 5 HOH HOH 1777 A HOH 1779 5 HOH HOH 1779 A HOH 1783 5 HOH HOH 1783 A HOH 1785 5 HOH HOH 1785 A HOH 1793 5 HOH HOH 1793 A HOH 1794 5 HOH HOH 1794 A HOH 1798 5 HOH HOH 1798 A HOH 1502 5 HOH HOH 1502 B HOH 1506 5 HOH HOH 1506 B HOH 1514 5 HOH HOH 1514 B HOH 1533 5 HOH HOH 1533 B HOH 1541 5 HOH HOH 1541 B HOH 1543 5 HOH HOH 1543 B HOH 1547 5 HOH HOH 1547 B HOH 1549 5 HOH HOH 1549 B HOH 1552 5 HOH HOH 1552 B HOH 1561 5 HOH HOH 1561 B HOH 1562 5 HOH HOH 1562 B HOH 1584 5 HOH HOH 1584 B HOH 1588 5 HOH HOH 1588 B HOH 1590 5 HOH HOH 1590 B HOH 1594 5 HOH HOH 1594 B HOH 1595 5 HOH HOH 1595 B HOH 1607 5 HOH HOH 1607 B HOH 1608 5 HOH HOH 1608 B HOH 1613 5 HOH HOH 1613 B HOH 1614 5 HOH HOH 1614 B HOH 1619 5 HOH HOH 1619 B HOH 1622 5 HOH HOH 1622 B HOH 1624 5 HOH HOH 1624 B HOH 1629 5 HOH HOH 1629 B HOH 1637 5 HOH HOH 1637 B HOH 1640 5 HOH HOH 1640 B HOH 1643 5 HOH HOH 1643 B HOH 1644 5 HOH HOH 1644 B HOH 1645 5 HOH HOH 1645 B HOH 1653 5 HOH HOH 1653 B HOH 1661 5 HOH HOH 1661 B HOH 1663 5 HOH HOH 1663 B HOH 1671 5 HOH HOH 1671 B HOH 1679 5 HOH HOH 1679 B HOH 1680 5 HOH HOH 1680 B HOH 1685 5 HOH HOH 1685 B HOH 1687 5 HOH HOH 1687 B HOH 1689 5 HOH HOH 1689 B HOH 1691 5 HOH HOH 1691 B HOH 1692 5 HOH HOH 1692 B HOH 1698 5 HOH HOH 1698 B HOH 1702 5 HOH HOH 1702 B HOH 1713 5 HOH HOH 1713 B HOH 1715 5 HOH HOH 1715 B HOH 1721 5 HOH HOH 1721 B HOH 1723 5 HOH HOH 1723 B HOH 1732 5 HOH HOH 1732 B HOH 1733 5 HOH HOH 1733 B HOH 1737 5 HOH HOH 1737 B HOH 1740 5 HOH HOH 1740 B HOH 1742 5 HOH HOH 1742 B HOH 1745 5 HOH HOH 1745 B HOH 1747 5 HOH HOH 1747 B HOH 1748 5 HOH HOH 1748 B HOH 1762 5 HOH HOH 1762 B HOH 1769 5 HOH HOH 1769 B HOH 1773 5 HOH HOH 1773 B HOH 1776 5 HOH HOH 1776 B HOH 1778 5 HOH HOH 1778 B HOH 1787 5 HOH HOH 1787 B HOH 1792 5 HOH HOH 1792 B A 1401 n 1 DA 1401 C A 1402 n 2 DA 1402 C C 1403 n 3 DC 1403 C T 1404 n 4 DT 1404 C T 1405 n 5 DT 1405 C A 1406 n 6 DA 1406 C C 1407 n 7 DC 1407 C T 1408 n 8 DT 1408 C T 1409 n 9 DT 1409 C T 1410 n 10 DT 1410 C +T 1411 n 11 5IU 1411 C +T 1412 n 12 5IU 1412 C A 1413 n 13 DA 1413 C A 1414 n 14 DA 1414 C A 1415 n 15 DA 1415 C G 1416 n 16 DG 1416 C C 1417 n 17 DC 1417 C G 1418 n 1 DG 1418 E C 1419 n 2 DC 1419 E T 1420 n 3 DT 1420 E T 1421 n 4 DT 1421 E T 1422 n 5 DT 1422 E A 1423 n 6 DA 1423 E A 1424 n 7 DA 1424 E A 1425 n 8 DA 1425 E A 1426 n 9 DA 1426 E A 1427 n 10 DA 1427 E G 1428 n 11 DG 1428 E T 1429 n 12 DT 1429 E A 1430 n 13 DA 1430 E A 1431 n 14 DA 1431 E G 1432 n 15 DG 1432 E T 1433 n 16 DT 1433 E T 1434 n 17 DT 1434 E MET 1 n 1 MET 1 A VAL 2 n 2 VAL 2 A ASP 3 n 3 ASP 3 A MET 4 n 4 MET 4 A SER 5 n 5 SER 5 A LYS 6 n 6 LYS 6 A VAL 7 n 7 VAL 7 A LYS 8 n 8 LYS 8 A LEU 9 n 9 LEU 9 A ARG 10 n 10 ARG 10 A ILE 11 n 11 ILE 11 A GLU 12 n 12 GLU 12 A ASN 13 n 13 ASN 13 A ILE 14 n 14 ILE 14 A VAL 15 n 15 VAL 15 A ALA 16 n 16 ALA 16 A SER 17 n 17 SER 17 A VAL 18 n 18 VAL 18 A ASP 19 n 19 ASP 19 A LEU 20 n 20 LEU 20 A PHE 21 n 21 PHE 21 A ALA 22 n 22 ALA 22 A GLN 23 n 23 GLN 23 A LEU 24 n 24 LEU 24 A ASP 25 n 25 ASP 25 A LEU 26 n 26 LEU 26 A GLU 27 n 27 GLU 27 A LYS 28 n 28 LYS 28 A VAL 29 n 29 VAL 29 A LEU 30 n 30 LEU 30 A ASP 31 n 31 ASP 31 A LEU 32 n 32 LEU 32 A CYS 33 n 33 CYS 33 A PRO 34 n 34 PRO 34 A ASN 35 n 35 ASN 35 A SER 36 n 36 SER 36 A LYS 37 n 37 LYS 37 A TYR 38 n 38 TYR 38 A ASN 39 n 39 ASN 39 A PRO 40 n 40 PRO 40 A GLU 41 n 41 GLU 41 A GLU 42 n 42 GLU 42 A PHE 43 n 43 PHE 43 A PRO 44 n 44 PRO 44 A GLY 45 n 45 GLY 45 A ILE 46 n 46 ILE 46 A ILE 47 n 47 ILE 47 A CYS 48 n 48 CYS 48 A HIS 49 n 49 HIS 49 A LEU 50 n 50 LEU 50 A ASP 51 n 51 ASP 51 A ASP 52 n 52 ASP 52 A PRO 53 n 53 PRO 53 A LYS 54 n 54 LYS 54 A VAL 55 n 55 VAL 55 A ALA 56 n 56 ALA 56 A LEU 57 n 57 LEU 57 A LEU 58 n 58 LEU 58 A ILE 59 n 59 ILE 59 A PHE 60 n 60 PHE 60 A SER 61 n 61 SER 61 A SER 62 n 62 SER 62 A GLY 63 n 63 GLY 63 A LYS 64 n 64 LYS 64 A LEU 65 n 65 LEU 65 A VAL 66 n 66 VAL 66 A VAL 67 n 67 VAL 67 A THR 68 n 68 THR 68 A GLY 69 n 69 GLY 69 A ALA 70 n 70 ALA 70 A LYS 71 n 71 LYS 71 A SER 72 n 72 SER 72 A VAL 73 n 73 VAL 73 A GLN 74 n 74 GLN 74 A ASP 75 n 75 ASP 75 A ILE 76 n 76 ILE 76 A GLU 77 n 77 GLU 77 A ARG 78 n 78 ARG 78 A ALA 79 n 79 ALA 79 A VAL 80 n 80 VAL 80 A ALA 81 n 81 ALA 81 A LYS 82 n 82 LYS 82 A LEU 83 n 83 LEU 83 A ALA 84 n 84 ALA 84 A GLN 85 n 85 GLN 85 A LYS 86 n 86 LYS 86 A LEU 87 n 87 LEU 87 A LYS 88 n 88 LYS 88 A SER 89 n 89 SER 89 A ILE 90 n 90 ILE 90 A GLY 91 n 91 GLY 91 A VAL 92 n 92 VAL 92 A LYS 93 n 93 LYS 93 A PHE 94 n 94 PHE 94 A LYS 95 n 95 LYS 95 A ARG 96 n 96 ARG 96 A ALA 97 n 97 ALA 97 A PRO 98 n 98 PRO 98 A GLN 99 n 99 GLN 99 A ILE 100 n 100 ILE 100 A ASP 101 n 101 ASP 101 A VAL 102 n 102 VAL 102 A GLN 103 n 103 GLN 103 A ASN 104 n 104 ASN 104 A MET 105 n 105 MET 105 A VAL 106 n 106 VAL 106 A PHE 107 n 107 PHE 107 A SER 108 n 108 SER 108 A GLY 109 n 109 GLY 109 A ASP 110 n 110 ASP 110 A ILE 111 n 111 ILE 111 A GLY 112 n 112 GLY 112 A ARG 113 n 113 ARG 113 A GLU 114 n 114 GLU 114 A PHE 115 n 115 PHE 115 A ASN 116 n 116 ASN 116 A LEU 117 n 117 LEU 117 A ASP 118 n 118 ASP 118 A VAL 119 n 119 VAL 119 A VAL 120 n 120 VAL 120 A ALA 121 n 121 ALA 121 A LEU 122 n 122 LEU 122 A THR 123 n 123 THR 123 A LEU 124 n 124 LEU 124 A PRO 125 n 125 PRO 125 A ASN 126 n 126 ASN 126 A CYS 127 n 127 CYS 127 A GLU 128 n 128 GLU 128 A TYR 129 n 129 TYR 129 A GLU 130 n 130 GLU 130 A PRO 131 n 131 PRO 131 A GLU 132 n 132 GLU 132 A GLN 133 n 133 GLN 133 A PHE 134 n 134 PHE 134 A PRO 135 n 135 PRO 135 A GLY 136 n 136 GLY 136 A VAL 137 n 137 VAL 137 A ILE 138 n 138 ILE 138 A TYR 139 n 139 TYR 139 A ARG 140 n 140 ARG 140 A VAL 141 n 141 VAL 141 A LYS 142 n 142 LYS 142 A GLU 143 n 143 GLU 143 A PRO 144 n 144 PRO 144 A LYS 145 n 145 LYS 145 A SER 146 n 146 SER 146 A VAL 147 n 147 VAL 147 A ILE 148 n 148 ILE 148 A LEU 149 n 149 LEU 149 A LEU 150 n 150 LEU 150 A PHE 151 n 151 PHE 151 A SER 152 n 152 SER 152 A SER 153 n 153 SER 153 A GLY 154 n 154 GLY 154 A LYS 155 n 155 LYS 155 A ILE 156 n 156 ILE 156 A VAL 157 n 157 VAL 157 A CYS 158 n 158 CYS 158 A SER 159 n 159 SER 159 A GLY 160 n 160 GLY 160 A ALA 161 n 161 ALA 161 A LYS 162 n 162 LYS 162 A SER 163 n 163 SER 163 A GLU 164 n 164 GLU 164 A ALA 165 n 165 ALA 165 A ASP 166 n 166 ASP 166 A ALA 167 n 167 ALA 167 A TRP 168 n 168 TRP 168 A GLU 169 n 169 GLU 169 A ALA 170 n 170 ALA 170 A VAL 171 n 171 VAL 171 A ARG 172 n 172 ARG 172 A LYS 173 n 173 LYS 173 A LEU 174 n 174 LEU 174 A LEU 175 n 175 LEU 175 A ARG 176 n 176 ARG 176 A GLU 177 n 177 GLU 177 A LEU 178 n 178 LEU 178 A ASP 179 n 179 ASP 179 A LYS 180 n 180 LYS 180 A TYR 181 n 181 TYR 181 A n 182 182 A n 1 1101 B n 2 1102 B n 3 1103 B n 4 1104 B n 5 1105 B n 6 1106 B n 7 1107 B ASN 1108 n 8 ASN 1108 B LEU 1109 n 9 LEU 1109 B ALA 1110 n 10 ALA 1110 B PHE 1111 n 11 PHE 1111 B ALA 1112 n 12 ALA 1112 B LEU 1113 n 13 LEU 1113 B SER 1114 n 14 SER 1114 B GLU 1115 n 15 GLU 1115 B LEU 1116 n 16 LEU 1116 B ASP 1117 n 17 ASP 1117 B ARG 1118 n 18 ARG 1118 B ILE 1119 n 19 ILE 1119 B THR 1120 n 20 THR 1120 B ALA 1121 n 21 ALA 1121 B GLN 1122 n 22 GLN 1122 B LEU 1123 n 23 LEU 1123 B LYS 1124 n 24 LYS 1124 B LEU 1125 n 25 LEU 1125 B PRO 1126 n 26 PRO 1126 B ARG 1127 n 27 ARG 1127 B HIS 1128 n 28 HIS 1128 B VAL 1129 n 29 VAL 1129 B GLU 1130 n 30 GLU 1130 B GLU 1131 n 31 GLU 1131 B GLU 1132 n 32 GLU 1132 B ALA 1133 n 33 ALA 1133 B ALA 1134 n 34 ALA 1134 B ARG 1135 n 35 ARG 1135 B LEU 1136 n 36 LEU 1136 B TYR 1137 n 37 TYR 1137 B ARG 1138 n 38 ARG 1138 B GLU 1139 n 39 GLU 1139 B ALA 1140 n 40 ALA 1140 B VAL 1141 n 41 VAL 1141 B ARG 1142 n 42 ARG 1142 B LYS 1143 n 43 LYS 1143 B GLY 1144 n 44 GLY 1144 B LEU 1145 n 45 LEU 1145 B ILE 1146 n 46 ILE 1146 B ARG 1147 n 47 ARG 1147 B GLY 1148 n 48 GLY 1148 B ARG 1149 n 49 ARG 1149 B SER 1150 n 50 SER 1150 B ILE 1151 n 51 ILE 1151 B GLU 1152 n 52 GLU 1152 B SER 1153 n 53 SER 1153 B VAL 1154 n 54 VAL 1154 B MET 1155 n 55 MET 1155 B ALA 1156 n 56 ALA 1156 B ALA 1157 n 57 ALA 1157 B CYS 1158 n 58 CYS 1158 B VAL 1159 n 59 VAL 1159 B TYR 1160 n 60 TYR 1160 B ALA 1161 n 61 ALA 1161 B ALA 1162 n 62 ALA 1162 B CYS 1163 n 63 CYS 1163 B ARG 1164 n 64 ARG 1164 B LEU 1165 n 65 LEU 1165 B LEU 1166 n 66 LEU 1166 B LYS 1167 n 67 LYS 1167 B VAL 1168 n 68 VAL 1168 B PRO 1169 n 69 PRO 1169 B ARG 1170 n 70 ARG 1170 B THR 1171 n 71 THR 1171 B LEU 1172 n 72 LEU 1172 B ASP 1173 n 73 ASP 1173 B GLU 1174 n 74 GLU 1174 B ILE 1175 n 75 ILE 1175 B ALA 1176 n 76 ALA 1176 B ASP 1177 n 77 ASP 1177 B ILE 1178 n 78 ILE 1178 B ALA 1179 n 79 ALA 1179 B ARG 1180 n 80 ARG 1180 B VAL 1181 n 81 VAL 1181 B ASP 1182 n 82 ASP 1182 B LYS 1183 n 83 LYS 1183 B LYS 1184 n 84 LYS 1184 B GLU 1185 n 85 GLU 1185 B ILE 1186 n 86 ILE 1186 B GLY 1187 n 87 GLY 1187 B ARG 1188 n 88 ARG 1188 B SER 1189 n 89 SER 1189 B TYR 1190 n 90 TYR 1190 B ARG 1191 n 91 ARG 1191 B PHE 1192 n 92 PHE 1192 B ILE 1193 n 93 ILE 1193 B ALA 1194 n 94 ALA 1194 B ARG 1195 n 95 ARG 1195 B ASN 1196 n 96 ASN 1196 B LEU 1197 n 97 LEU 1197 B ASN 1198 n 98 ASN 1198 B LEU 1199 n 99 LEU 1199 B THR 1200 n 100 THR 1200 B PRO 1201 n 101 PRO 1201 B LYS 1202 n 102 LYS 1202 B LYS 1203 n 103 LYS 1203 B LEU 1204 n 104 LEU 1204 B PHE 1205 n 105 PHE 1205 B VAL 1206 n 106 VAL 1206 B LYS 1207 n 107 LYS 1207 B PRO 1208 n 108 PRO 1208 B THR 1209 n 109 THR 1209 B ASP 1210 n 110 ASP 1210 B TYR 1211 n 111 TYR 1211 B VAL 1212 n 112 VAL 1212 B ASN 1213 n 113 ASN 1213 B LYS 1214 n 114 LYS 1214 B PHE 1215 n 115 PHE 1215 B ALA 1216 n 116 ALA 1216 B ASP 1217 n 117 ASP 1217 B GLU 1218 n 118 GLU 1218 B LEU 1219 n 119 LEU 1219 B GLY 1220 n 120 GLY 1220 B LEU 1221 n 121 LEU 1221 B SER 1222 n 122 SER 1222 B GLU 1223 n 123 GLU 1223 B LYS 1224 n 124 LYS 1224 B VAL 1225 n 125 VAL 1225 B ARG 1226 n 126 ARG 1226 B ARG 1227 n 127 ARG 1227 B ARG 1228 n 128 ARG 1228 B ALA 1229 n 129 ALA 1229 B ILE 1230 n 130 ILE 1230 B GLU 1231 n 131 GLU 1231 B ILE 1232 n 132 ILE 1232 B LEU 1233 n 133 LEU 1233 B ASP 1234 n 134 ASP 1234 B GLU 1235 n 135 GLU 1235 B ALA 1236 n 136 ALA 1236 B TYR 1237 n 137 TYR 1237 B LYS 1238 n 138 LYS 1238 B ARG 1239 n 139 ARG 1239 B GLY 1240 n 140 GLY 1240 B LEU 1241 n 141 LEU 1241 B THR 1242 n 142 THR 1242 B SER 1243 n 143 SER 1243 B GLY 1244 n 144 GLY 1244 B LYS 1245 n 145 LYS 1245 B SER 1246 n 146 SER 1246 B PRO 1247 n 147 PRO 1247 B ALA 1248 n 148 ALA 1248 B GLY 1249 n 149 GLY 1249 B LEU 1250 n 150 LEU 1250 B VAL 1251 n 151 VAL 1251 B ALA 1252 n 152 ALA 1252 B ALA 1253 n 153 ALA 1253 B ALA 1254 n 154 ALA 1254 B LEU 1255 n 155 LEU 1255 B TYR 1256 n 156 TYR 1256 B ILE 1257 n 157 ILE 1257 B ALA 1258 n 158 ALA 1258 B SER 1259 n 159 SER 1259 B LEU 1260 n 160 LEU 1260 B LEU 1261 n 161 LEU 1261 B GLU 1262 n 162 GLU 1262 B GLY 1263 n 163 GLY 1263 B GLU 1264 n 164 GLU 1264 B LYS 1265 n 165 LYS 1265 B ARG 1266 n 166 ARG 1266 B THR 1267 n 167 THR 1267 B GLN 1268 n 168 GLN 1268 B ARG 1269 n 169 ARG 1269 B GLU 1270 n 170 GLU 1270 B VAL 1271 n 171 VAL 1271 B ALA 1272 n 172 ALA 1272 B GLU 1273 n 173 GLU 1273 B VAL 1274 n 174 VAL 1274 B ALA 1275 n 175 ALA 1275 B ARG 1276 n 176 ARG 1276 B VAL 1277 n 177 VAL 1277 B THR 1278 n 178 THR 1278 B GLU 1279 n 179 GLU 1279 B VAL 1280 n 180 VAL 1280 B THR 1281 n 181 THR 1281 B VAL 1282 n 182 VAL 1282 B ARG 1283 n 183 ARG 1283 B ASN 1284 n 184 ASN 1284 B ARG 1285 n 185 ARG 1285 B TYR 1286 n 186 TYR 1286 B LYS 1287 n 187 LYS 1287 B GLU 1288 n 188 GLU 1288 B LEU 1289 n 189 LEU 1289 B VAL 1290 n 190 VAL 1290 B GLU 1291 n 191 GLU 1291 B LYS 1292 n 192 LYS 1292 B LEU 1293 n 193 LEU 1293 B LYS 1294 n 194 LYS 1294 B ILE 1295 n 195 ILE 1295 B LYS 1296 n 196 LYS 1296 B VAL 1297 n 197 VAL 1297 B PRO 1298 n 198 PRO 1298 B ILE 1299 n 199 ILE 1299 B ALA 1300 n 200 ALA 1300 B author_defined_assembly 4 tetrameric C 5IU 1411 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE A 5IU 11 DU C 5IU 1412 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE A 5IU 12 DU 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O GLN 99 C O GLN 99 A N ASP 19 C N ASP 19 A O ALA 16 C O ALA 16 A N VAL 67 C N VAL 67 A O VAL 66 C O VAL 66 A N LEU 58 C N LEU 58 A O LEU 57 C O LEU 57 A N CYS 48 C N CYS 48 A O VAL 137 C O VAL 137 A N LEU 150 C N LEU 150 A O VAL 147 C O VAL 147 A N SER 159 C N SER 159 A O ILE 156 C O ILE 156 A N GLY 109 C N GLY 109 A O ASN 104 C O ASN 104 A N VAL 15 C N VAL 15 1 A LEU 182 C LEU 182 1 Y 1 B VAL 1101 D VAL 1 1 Y 1 B SER 1102 D SER 2 1 Y 1 B ASP 1103 D ASP 3 1 Y 1 B ALA 1104 D ALA 4 1 Y 1 B ALA 1105 D ALA 5 1 Y 1 B GLU 1106 D GLU 6 1 Y 1 B ARG 1107 D ARG 7 1 Y 1 C HOH 1531 E HOH 0 N 1 C DC 1407 0.088 SIDE CHAIN 1 C DA 1414 0.058 SIDE CHAIN 1 E DG 1418 0.051 SIDE CHAIN 1 E DA 1424 0.065 SIDE CHAIN 1 E DA 1425 0.060 SIDE CHAIN 1 -12.46 1.50 119.30 106.84 A A A C N CA ASP PRO PRO 52 53 53 Y 1 13.14 2.10 128.40 141.54 A A A C N CD ASP PRO PRO 52 53 53 Y 1 A ASN 35 75.16 -2.48 1 A ASP 52 -58.98 -95.75 1 B ILE 1146 62.69 158.93 1 B SER 1150 -32.65 141.24 1 B ARG 1170 -160.37 85.45 1 B LEU 1172 -49.61 -18.50 1 B ARG 1180 55.38 71.39 1 B VAL 1181 -178.53 -168.78 1 B LYS 1184 -62.86 -87.88 1 B ALA 1194 -60.27 -73.01 1 B LEU 1197 -102.08 -151.26 1 B LEU 1221 12.99 -137.97 1 B SER 1222 94.14 107.46 1 B ILE 1299 -78.83 -137.99 36.60 -13.89 0.0000 -7.356 -13.92 0.0000 -2.845 0.268 0.212 0.212 2.100 20.000 1839 36876 5.000 92.000 RANDOM 1 THROUGHOUT 2.000 MIR 40.0 2.100 20.000 288 3930 2 689 2951 0.009 1.55 22.3 1.53 31.10 2.100 20.000 1AIS 14445 3.000 3.000 0.088 1 4.000 92.000 2.100 2.180 3.700 0.396 4.000 96.20 data reduction DENZO data scaling SCALEPACK model building X-PLOR refinement X-PLOR phasing X-PLOR TATA-BINDING PROTEIN, TRANSCRIPTION INITIATION FACTOR IIB/DNA COMPLEX TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI 1 N N 2 N N 3 N N 4 N N 5 N N 5 N N 5 N N 5 N N A LEU 26 C LEU 26 HELX_P A VAL 29 C VAL 29 1 1 4 A VAL 73 C VAL 73 HELX_P A ILE 90 C ILE 90 1 2 18 A LEU 117 C LEU 117 HELX_P A THR 123 C THR 123 1 3 7 A GLU 164 C GLU 164 HELX_P A LEU 178 C LEU 178 1 4 15 B LEU 1109 D LEU 9 HELX_P B LEU 1123 D LEU 23 1 5 15 B ARG 1127 D ARG 27 HELX_P B LYS 1143 D LYS 43 1 6 17 B ILE 1151 D ILE 51 HELX_P B LEU 1165 D LEU 65 1 7 15 B LEU 1172 D LEU 72 HELX_P B ILE 1178 D ILE 78 1 8 7 B LYS 1183 D LYS 83 HELX_P B ASN 1196 D ASN 96 1 9 14 B PRO 1208 D PRO 108 HELX_P B LEU 1219 D LEU 119 5 10 12 B GLU 1223 D GLU 123 HELX_P B LYS 1238 D LYS 138 1 11 16 B PRO 1247 D PRO 147 HELX_P B LEU 1261 D LEU 161 1 12 15 B GLN 1268 D GLN 168 HELX_P B ALA 1275 D ALA 175 1 13 8 B GLU 1279 D GLU 179 HELX_P B LYS 1292 D LYS 192 1 14 14 disulf 2.038 A CYS 33 C SG CYS 33 1_555 A CYS 48 C SG CYS 48 1_555 covale 1.603 C DT 1410 A O3' DT 10 1_555 C 5IU 1411 A P 5IU 11 1_555 covale 1.613 C 5IU 1411 A O3' 5IU 11 1_555 C 5IU 1412 A P 5IU 12 1_555 covale 1.602 C 5IU 1412 A O3' 5IU 12 1_555 C DA 1413 A P DA 13 1_555 hydrog WATSON-CRICK C DA 1401 A N1 DA 1 1_555 E DT 1434 B N3 DT 17 1_555 hydrog WATSON-CRICK C DA 1401 A N6 DA 1 1_555 E DT 1434 B O4 DT 17 1_555 hydrog WATSON-CRICK C DA 1402 A N1 DA 2 1_555 E DT 1433 B N3 DT 16 1_555 hydrog WATSON-CRICK C DA 1402 A N6 DA 2 1_555 E DT 1433 B O4 DT 16 1_555 hydrog WATSON-CRICK C DC 1403 A N3 DC 3 1_555 E DG 1432 B N1 DG 15 1_555 hydrog WATSON-CRICK C DC 1403 A N4 DC 3 1_555 E DG 1432 B O6 DG 15 1_555 hydrog WATSON-CRICK C DC 1403 A O2 DC 3 1_555 E DG 1432 B N2 DG 15 1_555 hydrog WATSON-CRICK C DT 1404 A N3 DT 4 1_555 E DA 1431 B N1 DA 14 1_555 hydrog WATSON-CRICK C DT 1404 A O4 DT 4 1_555 E DA 1431 B N6 DA 14 1_555 hydrog WATSON-CRICK C DT 1405 A N3 DT 5 1_555 E DA 1430 B N1 DA 13 1_555 hydrog WATSON-CRICK C DT 1405 A O4 DT 5 1_555 E DA 1430 B N6 DA 13 1_555 hydrog WATSON-CRICK C DA 1406 A N1 DA 6 1_555 E DT 1429 B N3 DT 12 1_555 hydrog WATSON-CRICK C DA 1406 A N6 DA 6 1_555 E DT 1429 B O4 DT 12 1_555 hydrog WATSON-CRICK C DC 1407 A N3 DC 7 1_555 E DG 1428 B N1 DG 11 1_555 hydrog WATSON-CRICK C DC 1407 A N4 DC 7 1_555 E DG 1428 B O6 DG 11 1_555 hydrog WATSON-CRICK C DC 1407 A O2 DC 7 1_555 E DG 1428 B N2 DG 11 1_555 hydrog WATSON-CRICK C DT 1408 A N3 DT 8 1_555 E DA 1427 B N1 DA 10 1_555 hydrog WATSON-CRICK C DT 1408 A O4 DT 8 1_555 E DA 1427 B N6 DA 10 1_555 hydrog WATSON-CRICK C DT 1409 A N3 DT 9 1_555 E DA 1426 B N1 DA 9 1_555 hydrog WATSON-CRICK C DT 1409 A O4 DT 9 1_555 E DA 1426 B N6 DA 9 1_555 hydrog WATSON-CRICK C DT 1410 A N3 DT 10 1_555 E DA 1425 B N1 DA 8 1_555 hydrog WATSON-CRICK C DT 1410 A O4 DT 10 1_555 E DA 1425 B N6 DA 8 1_555 hydrog WATSON-CRICK C 5IU 1411 A N3 5IU 11 1_555 E DA 1424 B N1 DA 7 1_555 hydrog WATSON-CRICK C 5IU 1411 A O4 5IU 11 1_555 E DA 1424 B N6 DA 7 1_555 hydrog WATSON-CRICK C 5IU 1412 A N3 5IU 12 1_555 E DA 1423 B N1 DA 6 1_555 hydrog WATSON-CRICK C 5IU 1412 A O4 5IU 12 1_555 E DA 1423 B N6 DA 6 1_555 hydrog WATSON-CRICK C DA 1413 A N1 DA 13 1_555 E DT 1422 B N3 DT 5 1_555 hydrog WATSON-CRICK C DA 1413 A N6 DA 13 1_555 E DT 1422 B O4 DT 5 1_555 hydrog WATSON-CRICK C DA 1414 A N1 DA 14 1_555 E DT 1421 B N3 DT 4 1_555 hydrog WATSON-CRICK C DA 1414 A N6 DA 14 1_555 E DT 1421 B O4 DT 4 1_555 hydrog WATSON-CRICK C DA 1415 A N1 DA 15 1_555 E DT 1420 B N3 DT 3 1_555 hydrog WATSON-CRICK C DA 1415 A N6 DA 15 1_555 E DT 1420 B O4 DT 3 1_555 hydrog WATSON-CRICK C DG 1416 A N1 DG 16 1_555 E DC 1419 B N3 DC 2 1_555 hydrog WATSON-CRICK C DG 1416 A N2 DG 16 1_555 E DC 1419 B O2 DC 2 1_555 hydrog WATSON-CRICK C DG 1416 A O6 DG 16 1_555 E DC 1419 B N4 DC 2 1_555 hydrog WATSON-CRICK C DC 1417 A N3 DC 17 1_555 E DG 1418 B N1 DG 1 1_555 hydrog WATSON-CRICK C DC 1417 A N4 DC 17 1_555 E DG 1418 B O6 DG 1 1_555 hydrog WATSON-CRICK C DC 1417 A O2 DC 17 1_555 E DG 1418 B N2 DG 1 1_555 TRANSCRIPTION/DNA TRANSCRIPTION, HYPERTHERMOPHILE, RIBOSOME BINDING, COMPLEX (RIBOSOME BINDING- DNA), TRANSCRIPTION-DNA COMPLEX A GLU 143 C GLU 143 1 A PRO 144 C PRO 144 -0.41 TBP_PYRWO UNP 3 1 P62001 TF2B_PYRWO UNP 4 101 P61999 1AIS PDB 1 1AIS 1AIS PDB 2 1AIS 1 181 1AIS 1 182 P62001 A 1 1 182 101 300 1AIS 1101 1300 P61999 B 2 1 200 1401 1417 1AIS 1401 1417 1AIS C 3 1 17 1418 1434 1AIS 1418 1434 1AIS E 4 1 17 1 INSERTION LEU 182 1AIS A P62001 UNP 182 5 5 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLN 99 C GLN 99 A VAL 102 C VAL 102 A ALA 16 C ALA 16 A ASP 19 C ASP 19 A LYS 64 C LYS 64 A THR 68 C THR 68 A ALA 56 C ALA 56 A ILE 59 C ILE 59 A ILE 46 C ILE 46 A HIS 49 C HIS 49 A VAL 137 C VAL 137 A VAL 141 C VAL 141 A SER 146 C SER 146 A LEU 150 C LEU 150 A LYS 155 C LYS 155 A ALA 161 C ALA 161 A ASN 104 C ASN 104 A ASP 110 C ASP 110 A LYS 8 C LYS 8 A VAL 15 C VAL 15 5 C 1 2 1