0.021692 0.000000 0.005731 0.000000 0.016420 0.000000 0.000000 0.000000 0.014149 0.00000 0.00000 0.00000 Wedemayer, G.J. Wang, L.H. Patten, P.A. Schultz, P.G. Stevens, R.C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 104.80 90.00 46.100 60.900 73.100 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C11 H13 N O7 P -1 302.197 5-(PARA-NITROPHENYL PHOSPHONATE)-PENTANOIC ACID non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Science SCIEAS 0038 0036-8075 276 1665 1669 10.1126/science.276.5319.1665 9180069 Structural insights into the evolution of an antibody combining site. 1997 UK J.Mol.Biol. JMOBAK 0070 0022-2836 268 390 Crystal Structures of the Free and Liganded Form of an Esterolytic Catalytic Antibody 1997 US Science SCIEAS 0038 0036-8075 271 1086 The Immunological Evolution of Catalysis 1996 US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 90 1160 A Genetic Approach to the Generation of Antibodies with Enhanced Catalytic Activities 1993 10.2210/pdb1aj7/pdb pdb_00001aj7 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 IMAGE PLATE 1996-05 MARRESEARCH M x-ray 1 1.08 1.0 BL7-1 SSRL 1.08 SYNCHROTRON SSRL BEAMLINE BL7-1 23464.988 IMMUNOGLOBULIN 48G7 FAB (LIGHT CHAIN) VARIABLE DOMAINS OF LIGHT AND HEAVY CHAINS AND CONSTANT DOMAINS OF LIGHT AND HEAVY CHAINS 1 man polymer 23062.750 IMMUNOGLOBULIN 48G7 FAB (HEAVY CHAIN) VARIABLE DOMAINS OF LIGHT AND HEAVY CHAINS AND CONSTANT DOMAINS OF LIGHT AND HEAVY CHAINS 1 man polymer 302.197 5-(PARA-NITROPHENYL PHOSPHONATE)-PENTANOIC ACID 1 syn non-polymer no no DIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLES EDFADYYCLQYASYPRTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC DIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSDYSLTISSLES EDFADYYCLQYASYPRTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQ ESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC L polypeptide(L) no no QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAY LQLSSLTSEDTAVYYCASYYGIYWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAL TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC QVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAY LQLSSLTSEDTAVYYCASYYGIYWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAL TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC H polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus Escherichia Escherichia coli sample EACH CHAIN IS A FUSION POLYPEPTIDE WHICH IS PART HUMAN AND PART MOUSE 48G7 CONSTANT DOMAINS OF LIGHT AND HEAVY CHAINS 10090 Mus musculus 511693 Escherichia coli BL21 BL21 PSAL143 human Homo Escherichia Escherichia coli sample EACH CHAIN IS A FUSION POLYPEPTIDE WHICH IS PART HUMAN AND PART MOUSE 48G7 CONSTANT DOMAINS OF LIGHT AND HEAVY CHAINS 9606 Homo sapiens 511693 Escherichia coli BL21 BL21 PSAL143 1 2.13 42.29 8.0 10-15 MG/ML FAB IN 100MM NACL, 10MM TRIS PH 8.0, 1MM METHIONINE, 1MM SODIUM AZIDE, 0.5 MM EDTA. database_2 pdbx_initial_refinement_model struct_ref_seq_dif struct_site repository Initial release Version format compliance Version format compliance Database references Derived calculations Refinement description 1 0 1997-11-12 1 1 2008-03-24 1 2 2011-07-13 1 3 2023-08-02 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1997-05-15 REL REL NPE 5-(PARA-NITROPHENYL PHOSPHONATE)-PENTANOIC ACID 1GAF PDB ENTRY 1GAF PDB experimental model NPE 1 3 NPE NPE 217 H ASP 1 n 1 ASP 1 L ILE 2 n 2 ILE 2 L GLN 3 n 3 GLN 3 L MET 4 n 4 MET 4 L THR 5 n 5 THR 5 L GLN 6 n 6 GLN 6 L SER 7 n 7 SER 7 L PRO 8 n 8 PRO 8 L SER 9 n 9 SER 9 L SER 10 n 10 SER 10 L LEU 11 n 11 LEU 11 L SER 12 n 12 SER 12 L ALA 13 n 13 ALA 13 L SER 14 n 14 SER 14 L LEU 15 n 15 LEU 15 L GLY 16 n 16 GLY 16 L GLU 17 n 17 GLU 17 L ARG 18 n 18 ARG 18 L VAL 19 n 19 VAL 19 L SER 20 n 20 SER 20 L LEU 21 n 21 LEU 21 L THR 22 n 22 THR 22 L CYS 23 n 23 CYS 23 L ARG 24 n 24 ARG 24 L ALA 25 n 25 ALA 25 L SER 26 n 26 SER 26 L GLN 27 n 27 GLN 27 L GLU 28 n 28 GLU 28 L ILE 29 n 29 ILE 29 L SER 30 n 30 SER 30 L GLY 31 n 31 GLY 31 L TYR 32 n 32 TYR 32 L LEU 33 n 33 LEU 33 L SER 34 n 34 SER 34 L TRP 35 n 35 TRP 35 L LEU 36 n 36 LEU 36 L GLN 37 n 37 GLN 37 L GLN 38 n 38 GLN 38 L LYS 39 n 39 LYS 39 L PRO 40 n 40 PRO 40 L ASP 41 n 41 ASP 41 L GLY 42 n 42 GLY 42 L THR 43 n 43 THR 43 L ILE 44 n 44 ILE 44 L LYS 45 n 45 LYS 45 L ARG 46 n 46 ARG 46 L LEU 47 n 47 LEU 47 L ILE 48 n 48 ILE 48 L TYR 49 n 49 TYR 49 L ALA 50 n 50 ALA 50 L ALA 51 n 51 ALA 51 L SER 52 n 52 SER 52 L THR 53 n 53 THR 53 L LEU 54 n 54 LEU 54 L ASP 55 n 55 ASP 55 L SER 56 n 56 SER 56 L GLY 57 n 57 GLY 57 L VAL 58 n 58 VAL 58 L PRO 59 n 59 PRO 59 L LYS 60 n 60 LYS 60 L ARG 61 n 61 ARG 61 L PHE 62 n 62 PHE 62 L SER 63 n 63 SER 63 L GLY 64 n 64 GLY 64 L SER 65 n 65 SER 65 L ARG 66 n 66 ARG 66 L SER 67 n 67 SER 67 L GLY 68 n 68 GLY 68 L SER 69 n 69 SER 69 L ASP 70 n 70 ASP 70 L TYR 71 n 71 TYR 71 L SER 72 n 72 SER 72 L LEU 73 n 73 LEU 73 L THR 74 n 74 THR 74 L ILE 75 n 75 ILE 75 L SER 76 n 76 SER 76 L SER 77 n 77 SER 77 L LEU 78 n 78 LEU 78 L GLU 79 n 79 GLU 79 L SER 80 n 80 SER 80 L GLU 81 n 81 GLU 81 L ASP 82 n 82 ASP 82 L PHE 83 n 83 PHE 83 L ALA 84 n 84 ALA 84 L ASP 85 n 85 ASP 85 L TYR 86 n 86 TYR 86 L TYR 87 n 87 TYR 87 L CYS 88 n 88 CYS 88 L LEU 89 n 89 LEU 89 L GLN 90 n 90 GLN 90 L TYR 91 n 91 TYR 91 L ALA 92 n 92 ALA 92 L SER 93 n 93 SER 93 L TYR 94 n 94 TYR 94 L PRO 95 n 95 PRO 95 L ARG 96 n 96 ARG 96 L THR 97 n 97 THR 97 L PHE 98 n 98 PHE 98 L GLY 99 n 99 GLY 99 L GLY 100 n 100 GLY 100 L GLY 101 n 101 GLY 101 L THR 102 n 102 THR 102 L LYS 103 n 103 LYS 103 L VAL 104 n 104 VAL 104 L GLU 105 n 105 GLU 105 L ILE 106 n 106 ILE 106 L LYS 107 n 107 LYS 107 L ARG 108 n 108 ARG 108 L THR 109 n 109 THR 109 L VAL 110 n 110 VAL 110 L ALA 111 n 111 ALA 111 L ALA 112 n 112 ALA 112 L PRO 113 n 113 PRO 113 L SER 114 n 114 SER 114 L VAL 115 n 115 VAL 115 L PHE 116 n 116 PHE 116 L ILE 117 n 117 ILE 117 L PHE 118 n 118 PHE 118 L PRO 119 n 119 PRO 119 L PRO 120 n 120 PRO 120 L SER 121 n 121 SER 121 L ASP 122 n 122 ASP 122 L GLU 123 n 123 GLU 123 L GLN 124 n 124 GLN 124 L LEU 125 n 125 LEU 125 L LYS 126 n 126 LYS 126 L SER 127 n 127 SER 127 L GLY 128 n 128 GLY 128 L THR 129 n 129 THR 129 L ALA 130 n 130 ALA 130 L SER 131 n 131 SER 131 L VAL 132 n 132 VAL 132 L VAL 133 n 133 VAL 133 L CYS 134 n 134 CYS 134 L LEU 135 n 135 LEU 135 L LEU 136 n 136 LEU 136 L ASN 137 n 137 ASN 137 L ASN 138 n 138 ASN 138 L PHE 139 n 139 PHE 139 L TYR 140 n 140 TYR 140 L PRO 141 n 141 PRO 141 L ARG 142 n 142 ARG 142 L GLU 143 n 143 GLU 143 L ALA 144 n 144 ALA 144 L LYS 145 n 145 LYS 145 L VAL 146 n 146 VAL 146 L GLN 147 n 147 GLN 147 L TRP 148 n 148 TRP 148 L LYS 149 n 149 LYS 149 L VAL 150 n 150 VAL 150 L ASP 151 n 151 ASP 151 L ASN 152 n 152 ASN 152 L ALA 153 n 153 ALA 153 L LEU 154 n 154 LEU 154 L GLN 155 n 155 GLN 155 L SER 156 n 156 SER 156 L GLY 157 n 157 GLY 157 L ASN 158 n 158 ASN 158 L SER 159 n 159 SER 159 L GLN 160 n 160 GLN 160 L GLU 161 n 161 GLU 161 L SER 162 n 162 SER 162 L VAL 163 n 163 VAL 163 L THR 164 n 164 THR 164 L GLU 165 n 165 GLU 165 L GLN 166 n 166 GLN 166 L ASP 167 n 167 ASP 167 L SER 168 n 168 SER 168 L LYS 169 n 169 LYS 169 L ASP 170 n 170 ASP 170 L SER 171 n 171 SER 171 L THR 172 n 172 THR 172 L TYR 173 n 173 TYR 173 L SER 174 n 174 SER 174 L LEU 175 n 175 LEU 175 L SER 176 n 176 SER 176 L SER 177 n 177 SER 177 L THR 178 n 178 THR 178 L LEU 179 n 179 LEU 179 L THR 180 n 180 THR 180 L LEU 181 n 181 LEU 181 L SER 182 n 182 SER 182 L LYS 183 n 183 LYS 183 L ALA 184 n 184 ALA 184 L ASP 185 n 185 ASP 185 L TYR 186 n 186 TYR 186 L GLU 187 n 187 GLU 187 L LYS 188 n 188 LYS 188 L HIS 189 n 189 HIS 189 L LYS 190 n 190 LYS 190 L VAL 191 n 191 VAL 191 L TYR 192 n 192 TYR 192 L ALA 193 n 193 ALA 193 L CYS 194 n 194 CYS 194 L GLU 195 n 195 GLU 195 L VAL 196 n 196 VAL 196 L THR 197 n 197 THR 197 L HIS 198 n 198 HIS 198 L GLN 199 n 199 GLN 199 L GLY 200 n 200 GLY 200 L LEU 201 n 201 LEU 201 L SER 202 n 202 SER 202 L SER 203 n 203 SER 203 L PRO 204 n 204 PRO 204 L VAL 205 n 205 VAL 205 L THR 206 n 206 THR 206 L LYS 207 n 207 LYS 207 L SER 208 n 208 SER 208 L PHE 209 n 209 PHE 209 L ASN 210 n 210 ASN 210 L ARG 211 n 211 ARG 211 L GLY 212 n 212 GLY 212 L GLU 213 n 213 GLU 213 L CYS 214 n 214 CYS 214 L GLN 1 n 1 GLN 1 H VAL 2 n 2 VAL 2 H GLN 3 n 3 GLN 3 H LEU 4 n 4 LEU 4 H GLN 5 n 5 GLN 5 H GLN 6 n 6 GLN 6 H SER 7 n 7 SER 7 H GLY 8 n 8 GLY 8 H ALA 9 n 9 ALA 9 H GLU 10 n 10 GLU 10 H LEU 11 n 11 LEU 11 H VAL 12 n 12 VAL 12 H LYS 13 n 13 LYS 13 H PRO 14 n 14 PRO 14 H GLY 15 n 15 GLY 15 H ALA 16 n 16 ALA 16 H SER 17 n 17 SER 17 H VAL 18 n 18 VAL 18 H LYS 19 n 19 LYS 19 H LEU 20 n 20 LEU 20 H SER 21 n 21 SER 21 H CYS 22 n 22 CYS 22 H THR 23 n 23 THR 23 H ALA 24 n 24 ALA 24 H SER 25 n 25 SER 25 H GLY 26 n 26 GLY 26 H PHE 27 n 27 PHE 27 H ASN 28 n 28 ASN 28 H ILE 29 n 29 ILE 29 H LYS 30 n 30 LYS 30 H ASP 31 n 31 ASP 31 H THR 32 n 32 THR 32 H TYR 33 n 33 TYR 33 H MET 34 n 34 MET 34 H HIS 35 n 35 HIS 35 H TRP 36 n 36 TRP 36 H VAL 37 n 37 VAL 37 H LYS 38 n 38 LYS 38 H GLN 39 n 39 GLN 39 H ARG 40 n 40 ARG 40 H PRO 41 n 41 PRO 41 H GLU 42 n 42 GLU 42 H GLN 43 n 43 GLN 43 H GLY 44 n 44 GLY 44 H LEU 45 n 45 LEU 45 H GLU 46 n 46 GLU 46 H TRP 47 n 47 TRP 47 H ILE 48 n 48 ILE 48 H GLY 49 n 49 GLY 49 H ARG 50 n 50 ARG 50 H ILE 51 n 51 ILE 51 H ASP 52 n 52 ASP 52 H PRO 52 n 53 A PRO 52 H ALA 53 n 54 ALA 53 H ASN 54 n 55 ASN 54 H GLY 55 n 56 GLY 55 H ASN 56 n 57 ASN 56 H THR 57 n 58 THR 57 H LYS 58 n 59 LYS 58 H TYR 59 n 60 TYR 59 H ASP 60 n 61 ASP 60 H PRO 61 n 62 PRO 61 H LYS 62 n 63 LYS 62 H PHE 63 n 64 PHE 63 H GLN 64 n 65 GLN 64 H GLY 65 n 66 GLY 65 H LYS 66 n 67 LYS 66 H ALA 67 n 68 ALA 67 H THR 68 n 69 THR 68 H ILE 69 n 70 ILE 69 H THR 70 n 71 THR 70 H ALA 71 n 72 ALA 71 H ASP 72 n 73 ASP 72 H THR 73 n 74 THR 73 H SER 74 n 75 SER 74 H SER 75 n 76 SER 75 H ASN 76 n 77 ASN 76 H THR 77 n 78 THR 77 H ALA 78 n 79 ALA 78 H TYR 79 n 80 TYR 79 H LEU 80 n 81 LEU 80 H GLN 81 n 82 GLN 81 H LEU 82 n 83 LEU 82 H SER 83 n 84 SER 83 H SER 84 n 85 SER 84 H LEU 85 n 86 LEU 85 H THR 86 n 87 THR 86 H SER 87 n 88 SER 87 H GLU 88 n 89 GLU 88 H ASP 89 n 90 ASP 89 H THR 90 n 91 THR 90 H ALA 91 n 92 ALA 91 H VAL 92 n 93 VAL 92 H TYR 93 n 94 TYR 93 H TYR 94 n 95 TYR 94 H CYS 95 n 96 CYS 95 H ALA 96 n 97 ALA 96 H SER 97 n 98 SER 97 H TYR 98 n 99 TYR 98 H TYR 99 n 100 TYR 99 H GLY 100 n 101 GLY 100 H ILE 101 n 102 ILE 101 H TYR 102 n 103 TYR 102 H TRP 103 n 104 TRP 103 H GLY 104 n 105 GLY 104 H GLN 105 n 106 GLN 105 H GLY 106 n 107 GLY 106 H THR 107 n 108 THR 107 H THR 108 n 109 THR 108 H LEU 109 n 110 LEU 109 H THR 110 n 111 THR 110 H VAL 111 n 112 VAL 111 H SER 112 n 113 SER 112 H SER 113 n 114 SER 113 H ALA 114 n 115 ALA 114 H SER 115 n 116 SER 115 H THR 116 n 117 THR 116 H LYS 117 n 118 LYS 117 H GLY 118 n 119 GLY 118 H PRO 119 n 120 PRO 119 H SER 120 n 121 SER 120 H VAL 121 n 122 VAL 121 H PHE 122 n 123 PHE 122 H PRO 123 n 124 PRO 123 H LEU 124 n 125 LEU 124 H ALA 125 n 126 ALA 125 H PRO 126 n 127 PRO 126 H SER 127 n 128 SER 127 H SER 128 n 129 SER 128 H LYS 129 n 130 LYS 129 H SER 130 n 131 SER 130 H THR 131 n 132 THR 131 H SER 132 n 133 SER 132 H GLY 133 n 134 GLY 133 H GLY 134 n 135 GLY 134 H THR 135 n 136 THR 135 H ALA 136 n 137 ALA 136 H ALA 137 n 138 ALA 137 H LEU 138 n 139 LEU 138 H GLY 139 n 140 GLY 139 H CYS 140 n 141 CYS 140 H LEU 141 n 142 LEU 141 H VAL 142 n 143 VAL 142 H LYS 143 n 144 LYS 143 H ASP 144 n 145 ASP 144 H TYR 145 n 146 TYR 145 H PHE 146 n 147 PHE 146 H PRO 147 n 148 PRO 147 H GLU 148 n 149 GLU 148 H PRO 149 n 150 PRO 149 H VAL 150 n 151 VAL 150 H THR 151 n 152 THR 151 H VAL 152 n 153 VAL 152 H SER 153 n 154 SER 153 H TRP 154 n 155 TRP 154 H ASN 155 n 156 ASN 155 H SER 156 n 157 SER 156 H GLY 157 n 158 GLY 157 H ALA 158 n 159 ALA 158 H LEU 159 n 160 LEU 159 H THR 160 n 161 THR 160 H SER 161 n 162 SER 161 H GLY 162 n 163 GLY 162 H VAL 163 n 164 VAL 163 H HIS 164 n 165 HIS 164 H THR 165 n 166 THR 165 H PHE 166 n 167 PHE 166 H PRO 167 n 168 PRO 167 H ALA 168 n 169 ALA 168 H VAL 169 n 170 VAL 169 H LEU 170 n 171 LEU 170 H GLN 171 n 172 GLN 171 H SER 172 n 173 SER 172 H SER 173 n 174 SER 173 H GLY 174 n 175 GLY 174 H LEU 175 n 176 LEU 175 H TYR 176 n 177 TYR 176 H SER 177 n 178 SER 177 H LEU 178 n 179 LEU 178 H SER 179 n 180 SER 179 H SER 180 n 181 SER 180 H VAL 181 n 182 VAL 181 H VAL 182 n 183 VAL 182 H THR 183 n 184 THR 183 H VAL 184 n 185 VAL 184 H PRO 185 n 186 PRO 185 H SER 186 n 187 SER 186 H SER 187 n 188 SER 187 H SER 188 n 189 SER 188 H LEU 189 n 190 LEU 189 H GLY 190 n 191 GLY 190 H THR 191 n 192 THR 191 H GLN 192 n 193 GLN 192 H THR 193 n 194 THR 193 H TYR 194 n 195 TYR 194 H ILE 195 n 196 ILE 195 H CYS 196 n 197 CYS 196 H ASN 197 n 198 ASN 197 H VAL 198 n 199 VAL 198 H ASN 199 n 200 ASN 199 H HIS 200 n 201 HIS 200 H LYS 201 n 202 LYS 201 H PRO 202 n 203 PRO 202 H SER 203 n 204 SER 203 H ASN 204 n 205 ASN 204 H THR 205 n 206 THR 205 H LYS 206 n 207 LYS 206 H VAL 207 n 208 VAL 207 H ASP 208 n 209 ASP 208 H LYS 209 n 210 LYS 209 H LYS 210 n 211 LYS 210 H VAL 211 n 212 VAL 211 H GLU 212 n 213 GLU 212 H PRO 213 n 214 PRO 213 H LYS 214 n 215 LYS 214 H SER 215 n 216 SER 215 H CYS 216 n 217 CYS 216 H author_and_software_defined_assembly PISA 2 dimeric 4310 -22 19270 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 L O THR 5 A O THR 5 L N ARG 24 A N ARG 24 L O VAL 19 A O VAL 19 L N ILE 75 A N ILE 75 L O ASP 70 A O ASP 70 L N SER 67 A N SER 67 L O LEU 11 A O LEU 11 L N LYS 103 A N LYS 103 L O THR 102 A O THR 102 L N TYR 86 A N TYR 86 L O ASP 85 A O ASP 85 L N GLN 38 A N GLN 38 L O TRP 35 A O TRP 35 L N ILE 48 A N ILE 48 L O SER 114 A O SER 114 L N ASN 137 A N ASN 137 L O ALA 130 A O ALA 130 L N LEU 181 A N LEU 181 L O SER 176 A O SER 176 L N SER 162 A N SER 162 L O LYS 145 A O LYS 145 L N THR 197 A N THR 197 L O TYR 192 A O TYR 192 L N PHE 209 A N PHE 209 H O GLN 3 B O GLN 3 H N SER 25 B N SER 25 H O VAL 18 B O VAL 18 H N LEU 82 B N LEU 83 H O THR 77 B O THR 78 H N ASP 72 B N ASP 73 H O GLU 10 B O GLU 10 H N THR 110 B N THR 111 H O THR 107 B O THR 108 H N TYR 93 B N TYR 94 H O VAL 92 B O VAL 93 H N GLN 39 B N GLN 39 H O MET 34 B O MET 34 H N ILE 51 B N ILE 51 H O ARG 50 B O ARG 50 H N LYS 58 B N LYS 59 H O SER 120 B O SER 121 H N LYS 143 B N LYS 144 H O ALA 136 B O ALA 137 H N VAL 184 B N VAL 185 H O VAL 181 B O VAL 182 H N HIS 164 B N HIS 165 H O THR 151 B O THR 152 H N ASN 199 B N ASN 200 H O CYS 196 B O CYS 197 H N LYS 209 B N LYS 210 1 H H OE2 CG GLU PRO 42 213 1.60 1_555 2_645 1 H H OE1 CB GLU PRO 42 213 1.93 1_555 2_645 1 L ALA 51 71.99 -41.17 1 L ASN 152 73.60 -6.89 1 L ARG 211 -68.20 93.77 1 H ILE 29 -37.00 -37.48 1 H THR 32 69.74 161.09 1 H TYR 33 62.78 104.21 1 H LYS 66 -131.78 -36.45 1 H ALA 91 -171.08 -175.17 1 H TYR 99 69.33 -3.04 1 H SER 128 -21.67 -72.16 1 H PRO 147 -94.29 -155.95 0.258 0.217 0.217 2.1 20. 23005 10. 99.5 1 2.0 MOLECULAR REPLACEMENT PDB ENTRY 1GAF 2.1 20. 0 4067 32 0 4035 0.008 1.542 0.286 0.233 2.11 35 339 60 10. 2.1 20. 1AJ7 23005 0.069 0.069 1 15. 3.5 99.5 0.204 2.1 2.17 5.2 0.204 3.5 98.1 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement X-PLOR 3.8 IMMUNOGLOBULIN 48G7 GERMLINE FAB ANTIBODY COMPLEXED WITH HAPTEN 5-(PARA-NITROPHENYL PHOSPHONATE)-PENTANOIC ACID. AFFINITY MATURATION OF AN ESTEROLYTIC ANTIBODY 1 N N 2 N N 3 N N L SER 80 A SER 80 HELX_P L ASP 82 A ASP 82 5 1 3 L ASP 122 A ASP 122 HELX_P L SER 127 A SER 127 1 2 6 L LYS 183 A LYS 183 HELX_P L GLU 187 A GLU 187 1 3 5 H ILE 29 B ILE 29 HELX_P H ASP 31 B ASP 31 5 4 3 H PRO 61 B PRO 62 HELX_P H PHE 63 B PHE 64 5 5 3 H SER 87 B SER 88 HELX_P H ASP 89 B ASP 90 5 6 3 H TYR 98 B TYR 99 HELX_P H GLY 100 B GLY 101 5 7 3 H ASN 155 B ASN 156 HELX_P H GLY 157 B GLY 158 5 8 3 H LYS 201 B LYS 202 HELX_P H SER 203 B SER 204 5 9 3 disulf 2.030 L CYS 23 A SG CYS 23 1_555 L CYS 88 A SG CYS 88 1_555 disulf 2.029 L CYS 134 A SG CYS 134 1_555 L CYS 194 A SG CYS 194 1_555 disulf 2.031 L CYS 214 A SG CYS 214 1_555 H CYS 216 B SG CYS 217 1_555 disulf 2.031 H CYS 22 B SG CYS 22 1_555 H CYS 95 B SG CYS 96 1_555 disulf 2.031 H CYS 140 B SG CYS 141 1_555 H CYS 196 B SG CYS 197 1_555 IMMUNOGLOBULIN GERMLINE ANTIBODY, FAB, CATALYTIC ANTIBODY, AFFINITY MATURATION, IMMUNOGLOBULIN L SER 7 A SER 7 1 L PRO 8 A PRO 8 -0.72 L TYR 94 A TYR 94 1 L PRO 95 A PRO 95 0.05 L TYR 140 A TYR 140 1 L PRO 141 A PRO 141 -0.30 H PHE 146 B PHE 147 1 H PRO 147 B PRO 148 -1.16 H GLU 148 B GLU 149 1 H PRO 149 B PRO 150 -0.32 AAD29608 GB 1 1 4768677 MDMRVSAQLLGLLLLWLSGARCDIQMTQSPSSLSASVGDRVTITCQASQDINNYLNWYQQKPGKTPKLLIYGASNLETGV PSRFSGSGSGTDFIFTISSLQPEDIATYYCQQYDNLPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNN FYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSNTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC IGHG1_HUMAN UNP 2 1 P01857 ASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQT YICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNW YVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDE LTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYT QKSLSLSPGK 23 236 1AJ7 1 214 4768677 L 1 1 214 1 103 1AJ7 114 216 P01857 H 2 115 217 1 VAL conflict LEU 15 1AJ7 L 4768677 GB 37 15 1 ASP conflict GLU 17 1AJ7 L 4768677 GB 39 17 1 THR conflict SER 20 1AJ7 L 4768677 GB 42 20 1 ILE conflict LEU 21 1AJ7 L 4768677 GB 43 21 1 GLN conflict ARG 24 1AJ7 L 4768677 GB 46 24 1 ASP conflict GLU 28 1AJ7 L 4768677 GB 50 28 1 ASN conflict SER 30 1AJ7 L 4768677 GB 52 30 1 ASN conflict GLY 31 1AJ7 L 4768677 GB 53 31 1 ASN conflict SER 34 1AJ7 L 4768677 GB 56 34 1 TYR conflict LEU 36 1AJ7 L 4768677 GB 58 36 1 GLY conflict ASP 41 1AJ7 L 4768677 GB 63 41 1 LYS conflict GLY 42 1AJ7 L 4768677 GB 64 42 1 PRO conflict ILE 44 1AJ7 L 4768677 GB 66 44 1 LEU conflict ARG 46 1AJ7 L 4768677 GB 68 46 1 GLY conflict ALA 50 1AJ7 L 4768677 GB 72 50 1 ASN conflict THR 53 1AJ7 L 4768677 GB 75 53 1 GLU conflict ASP 55 1AJ7 L 4768677 GB 77 55 1 THR conflict SER 56 1AJ7 L 4768677 GB 78 56 1 SER conflict LYS 60 1AJ7 L 4768677 GB 82 60 1 GLY conflict ARG 66 1AJ7 L 4768677 GB 88 66 1 THR conflict SER 69 1AJ7 L 4768677 GB 91 69 1 PHE conflict TYR 71 1AJ7 L 4768677 GB 93 71 1 ILE conflict SER 72 1AJ7 L 4768677 GB 94 72 1 PHE conflict LEU 73 1AJ7 L 4768677 GB 95 73 1 GLN conflict GLU 79 1AJ7 L 4768677 GB 101 79 1 PRO conflict SER 80 1AJ7 L 4768677 GB 102 80 1 ILE conflict PHE 83 1AJ7 L 4768677 GB 105 83 1 THR conflict ASP 85 1AJ7 L 4768677 GB 107 85 1 GLN conflict LEU 89 1AJ7 L 4768677 GB 111 89 1 ASP conflict ALA 92 1AJ7 L 4768677 GB 114 92 1 ASN conflict SER 93 1AJ7 L 4768677 GB 115 93 1 LEU conflict TYR 94 1AJ7 L 4768677 GB 116 94 1 LEU conflict ARG 96 1AJ7 L 4768677 GB 118 96 1 ASN conflict SER 177 1AJ7 L 4768677 GB 199 177 4 5 4 3 4 6 4 3 anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel L MET 4 A MET 4 L SER 7 A SER 7 L VAL 19 A VAL 19 L ALA 25 A ALA 25 L ASP 70 A ASP 70 L ILE 75 A ILE 75 L PHE 62 A PHE 62 L SER 67 A SER 67 L SER 10 A SER 10 L SER 14 A SER 14 L THR 102 A THR 102 L LYS 107 A LYS 107 L ALA 84 A ALA 84 L GLN 90 A GLN 90 L LEU 33 A LEU 33 L GLN 38 A GLN 38 L ILE 44 A ILE 44 L ILE 48 A ILE 48 L SER 114 A SER 114 L PHE 118 A PHE 118 L THR 129 A THR 129 L ASN 137 A ASN 137 L LEU 175 A LEU 175 L SER 182 A SER 182 L SER 159 A SER 159 L VAL 163 A VAL 163 L LYS 145 A LYS 145 L VAL 150 A VAL 150 L VAL 191 A VAL 191 L THR 197 A THR 197 L VAL 205 A VAL 205 L ASN 210 A ASN 210 H GLN 3 B GLN 3 H GLN 6 B GLN 6 H VAL 18 B VAL 18 H SER 25 B SER 25 H THR 77 B THR 78 H LEU 82 B LEU 83 H ALA 67 B ALA 68 H ASP 72 B ASP 73 H GLU 10 B GLU 10 H VAL 12 B VAL 12 H THR 107 B THR 108 H VAL 111 B VAL 112 H ALA 91 B ALA 92 H ALA 96 B ALA 97 H MET 34 B MET 34 H GLN 39 B GLN 39 H LEU 45 B LEU 45 H ASP 52 B ASP 52 H ASN 56 B ASN 57 H TYR 59 B TYR 60 H SER 120 B SER 121 H LEU 124 B LEU 125 H THR 135 B THR 136 H TYR 145 B TYR 146 H TYR 176 B TYR 177 H PRO 185 B PRO 186 H VAL 163 B VAL 164 H THR 165 B THR 166 H THR 151 B THR 152 H TRP 154 B TRP 155 H ILE 195 B ILE 196 H HIS 200 B HIS 201 H THR 205 B THR 206 H LYS 210 B LYS 211 BINDING SITE FOR RESIDUE NPE H 217 H NPE 217 Software 14 H TYR 33 B TYR 33 14 1_555 H HIS 35 B HIS 35 14 1_555 H TRP 47 B TRP 47 14 1_555 H ALA 96 B ALA 97 14 1_555 H TYR 98 B TYR 99 14 1_555 H TYR 99 B TYR 100 14 1_555 H GLY 100 B GLY 101 14 1_555 H TRP 103 B TRP 104 14 1_555 L LEU 89 A LEU 89 14 1_555 L TYR 94 A TYR 94 14 1_555 L ARG 96 A ARG 96 14 1_555 L PHE 98 A PHE 98 14 1_555 L ARG 211 A ARG 211 14 1_556 L GLU 213 A GLU 213 14 1_556 4 P 1 21 1