0.018709 0.010802 0.000000 0.000000 0.021603 0.000000 0.000000 0.000000 0.037369 0.00000 0.00000 0.00000 Fass, D. Blacklow, S.C. Kim, P.S. Berger, J.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 9 90.00 90.00 120.00 53.450 53.450 26.760 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Ca 2 40.078 CALCIUM ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking UK Nature NATUAS 0006 0028-0836 388 691 693 10.1038/41798 9262405 Molecular basis of familial hypercholesterolaemia from structure of LDL receptor module. 1997 US Nat.Struct.Biol. NSBIEW 2024 1072-8368 3 758 Protein Folding and Calcium Binding Defects Arising from Familial Hypercholesterolemia Mutations of the Ldl Receptor 1996 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 93 1 MIRRORS IMAGE PLATE 1996-11 RIGAKU NI FILTER M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RUH2R 4069.431 LOW-DENSITY LIPOPROTEIN RECEPTOR LIGAND-BINDING DOMAIN, FIFTH REPEAT 1 man polymer 96.063 SULFATE ION 1 syn non-polymer 40.078 CALCIUM ION 1 syn non-polymer 18.015 water 30 nat water LR5 no no PCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCA PCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCA A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia Escherichia coli sample 9606 Homo sapiens 511693 Escherichia coli BL21 BL21 PMM-LR5 1 1.81 28. 5.0 PROTEIN WAS CRYSTALLIZED FROM 2.1 M AMMONIUM SULFATE, PH 5.0, 25% SUCROSE repository Initial release Version format compliance Version format compliance 1 0 1997-07-07 1 1 2008-03-24 1 2 2011-07-13 Y BNL 1997-05-04 REL SO4 SULFATE ION CA CALCIUM ION HOH water SO4 72 2 SO4 SO4 72 A CA 73 3 CA CA 73 A HOH 42 4 HOH HOH 42 A HOH 43 4 HOH HOH 43 A HOH 44 4 HOH HOH 44 A HOH 45 4 HOH HOH 45 A HOH 46 4 HOH HOH 46 A HOH 47 4 HOH HOH 47 A HOH 48 4 HOH HOH 48 A HOH 49 4 HOH HOH 49 A HOH 50 4 HOH HOH 50 A HOH 51 4 HOH HOH 51 A HOH 52 4 HOH HOH 52 A HOH 53 4 HOH HOH 53 A HOH 54 4 HOH HOH 54 A HOH 55 4 HOH HOH 55 A HOH 56 4 HOH HOH 56 A HOH 57 4 HOH HOH 57 A HOH 58 4 HOH HOH 58 A HOH 59 4 HOH HOH 59 A HOH 60 4 HOH HOH 60 A HOH 61 4 HOH HOH 61 A HOH 62 4 HOH HOH 62 A HOH 63 4 HOH HOH 63 A HOH 64 4 HOH HOH 64 A HOH 65 4 HOH HOH 65 A HOH 66 4 HOH HOH 66 A HOH 67 4 HOH HOH 67 A HOH 68 4 HOH HOH 68 A HOH 69 4 HOH HOH 69 A HOH 70 4 HOH HOH 70 A HOH 71 4 HOH HOH 71 A PRO 4 n 1 PRO 4 A CYS 5 n 2 CYS 5 A SER 6 n 3 SER 6 A ALA 7 n 4 ALA 7 A PHE 8 n 5 PHE 8 A GLU 9 n 6 GLU 9 A PHE 10 n 7 PHE 10 A HIS 11 n 8 HIS 11 A CYS 12 n 9 CYS 12 A LEU 13 n 10 LEU 13 A SER 14 n 11 SER 14 A GLY 15 n 12 GLY 15 A GLU 16 n 13 GLU 16 A CYS 17 n 14 CYS 17 A ILE 18 n 15 ILE 18 A HIS 19 n 16 HIS 19 A SER 20 n 17 SER 20 A SER 21 n 18 SER 21 A TRP 22 n 19 TRP 22 A ARG 23 n 20 ARG 23 A CYS 24 n 21 CYS 24 A ASP 25 n 22 ASP 25 A GLY 26 n 23 GLY 26 A GLY 27 n 24 GLY 27 A PRO 28 n 25 PRO 28 A ASP 29 n 26 ASP 29 A CYS 30 n 27 CYS 30 A LYS 31 n 28 LYS 31 A ASP 32 n 29 ASP 32 A LYS 33 n 30 LYS 33 A SER 34 n 31 SER 34 A ASP 35 n 32 ASP 35 A GLU 36 n 33 GLU 36 A GLU 37 n 34 GLU 37 A ASN 38 n 35 ASN 38 A CYS 39 n 36 CYS 39 A ALA 40 n 37 ALA 40 A author_defined_assembly 1 monomeric A TRP 22 A O TRP 19 1_555 A CA 73 C CA CA 1_555 A GLY 27 A O GLY 24 1_555 170.3 A TRP 22 A O TRP 19 1_555 A CA 73 C CA CA 1_555 A ASP 35 A OD2 ASP 32 1_555 98.2 A GLY 27 A O GLY 24 1_555 A CA 73 C CA CA 1_555 A ASP 35 A OD2 ASP 32 1_555 91.3 A TRP 22 A O TRP 19 1_555 A CA 73 C CA CA 1_555 A ASP 25 A OD1 ASP 22 1_555 89.7 A GLY 27 A O GLY 24 1_555 A CA 73 C CA CA 1_555 A ASP 25 A OD1 ASP 22 1_555 80.6 A ASP 35 A OD2 ASP 32 1_555 A CA 73 C CA CA 1_555 A ASP 25 A OD1 ASP 22 1_555 168.6 A TRP 22 A O TRP 19 1_555 A CA 73 C CA CA 1_555 A ASP 29 A OD2 ASP 26 1_555 94.9 A GLY 27 A O GLY 24 1_555 A CA 73 C CA CA 1_555 A ASP 29 A OD2 ASP 26 1_555 87.2 A ASP 35 A OD2 ASP 32 1_555 A CA 73 C CA CA 1_555 A ASP 29 A OD2 ASP 26 1_555 87.6 A ASP 25 A OD1 ASP 22 1_555 A CA 73 C CA CA 1_555 A ASP 29 A OD2 ASP 26 1_555 100.1 A TRP 22 A O TRP 19 1_555 A CA 73 C CA CA 1_555 A GLU 36 A OE2 GLU 33 1_555 88.9 A GLY 27 A O GLY 24 1_555 A CA 73 C CA CA 1_555 A GLU 36 A OE2 GLU 33 1_555 88.7 A ASP 35 A OD2 ASP 32 1_555 A CA 73 C CA CA 1_555 A GLU 36 A OE2 GLU 33 1_555 93.7 A ASP 25 A OD1 ASP 22 1_555 A CA 73 C CA CA 1_555 A GLU 36 A OE2 GLU 33 1_555 78.1 A ASP 29 A OD2 ASP 26 1_555 A CA 73 C CA CA 1_555 A GLU 36 A OE2 GLU 33 1_555 175.8 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O PHE 10 A O PHE 7 A N ILE 18 A N ILE 15 1 5.47 0.80 106.30 111.77 A A A CD1 CG CD2 TRP TRP TRP 22 22 22 N 1 A A C O ALA ALA 40 40 -0.311 0.019 1.229 0.918 N 1 A A O O HOH HOH 49 69 2.17 1_555 9_554 1 A PHE 8 78.12 -21.18 0.24 0.209 0.209 1.7 15.0 227 2959 7.7 94.3 RANDOM 1 THROUGHOUT MIR 1.7 15.0 30 315 6 0 279 0.013 2.498 1.7 15.0 1AJJ 2959 1.5 0.054 1 20. 4.5 94.3 1.70 1.76 7. 0.169 3. 87.7 data reduction DENZO data scaling SCALEPACK model building X-PLOR 3.851 refinement X-PLOR 3.851 phasing X-PLOR 3.851 LOW-DENSITY LIPOPROTEIN RECEPTOR LDL RECEPTOR LIGAND-BINDING MODULE 5, CALCIUM-COORDINATING 1 N N 2 N N 3 N N 4 N N A SER 20 A SER 17 HELX_P A TRP 22 A TRP 19 5 1 3 A SER 34 A SER 31 HELX_P A GLU 36 A GLU 33 5 2 3 disulf 1.997 A CYS 5 A SG CYS 2 1_555 A CYS 17 A SG CYS 14 1_555 disulf 1.974 A CYS 12 A SG CYS 9 1_555 A CYS 30 A SG CYS 27 1_555 disulf 1.987 A CYS 24 A SG CYS 21 1_555 A CYS 39 A SG CYS 36 1_555 metalc 2.289 A CA 73 C CA CA 1_555 A TRP 22 A O TRP 19 1_555 metalc 2.317 A CA 73 C CA CA 1_555 A GLY 27 A O GLY 24 1_555 metalc 2.431 A CA 73 C CA CA 1_555 A ASP 35 A OD2 ASP 32 1_555 metalc 2.440 A CA 73 C CA CA 1_555 A ASP 25 A OD1 ASP 22 1_555 metalc 2.475 A CA 73 C CA CA 1_555 A ASP 29 A OD2 ASP 26 1_555 metalc 2.501 A CA 73 C CA CA 1_555 A GLU 36 A OE2 GLU 33 1_555 RECEPTOR RECEPTOR, LDL RECEPTOR, CYSTEINE-RICH MODULE, CALCIUM LDLR_HUMAN UNP 1 1 P01130 MGPWGWKLRWTVALLLAAAGTAVGDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVN RCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTC IPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCAVATCRPDE FQCSDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKECGTNECLD NNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAY LFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVN LLAENLLSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLTEAEAAVA TQETSTVRLKVSSTAVRTQHTTTRPVPDTSRLPGATPGLTTVEIVTMSHQALGDVAGRGNEKKPSSVRALSIVLPIVLLV FLCLGVFLLWKNWRLKNINSINFDNPVYQKTTEDEVHICHNQDGYSYPSRQMVSLEDDVA 196 232 1AJJ 4 40 P01130 A 1 1 37 2 anti-parallel A PHE 10 A PHE 7 A HIS 11 A HIS 8 A CYS 17 A CYS 14 A ILE 18 A ILE 15 BINDING SITE FOR RESIDUE SO4 A 72 Software 6 BINDING SITE FOR RESIDUE CA A 73 Software 6 A GLU 9 A GLU 6 6 1_555 A HIS 19 A HIS 16 6 1_555 A SER 20 A SER 17 6 1_555 A HOH 43 D HOH 6 5_555 A HOH 47 D HOH 6 5_555 A HOH 70 D HOH 6 1_555 A TRP 22 A TRP 19 6 1_555 A ASP 25 A ASP 22 6 1_555 A GLY 27 A GLY 24 6 1_555 A ASP 29 A ASP 26 6 1_555 A ASP 35 A ASP 32 6 1_555 A GLU 36 A GLU 33 6 1_555 146 H 3