0.00
9.787
-11.718
25.336
A
NA
PMY
1
HETATM
A
NA
PMY
1
1.00
1
N
0.00
11.082
-11.541
25.037
A
C1
PMY
1
HETATM
A
C1
PMY
1
1.00
1
C
0.00
11.969
-11.707
25.867
A
O1
PMY
1
HETATM
A
O1
PMY
1
1.00
1
O
0.00
11.472
-11.125
23.613
A
C2
PMY
1
HETATM
A
C2
PMY
1
1.00
1
C
0.00
12.867
-10.624
23.515
A
NB
PMY
1
HETATM
A
NB
PMY
1
1.00
1
N
0.00
11.531
-12.406
22.752
A
C3
PMY
1
HETATM
A
C3
PMY
1
1.00
1
C
0.00
11.907
-12.054
21.349
A
NC
PMY
1
HETATM
A
NC
PMY
1
1.00
1
N
0.00
8.048
-9.490
19.613
A
ND
PMY
1
HETATM
A
ND
PMY
1
1.00
1
N
0.00
8.912
-10.456
19.299
A
C4
PMY
1
HETATM
A
C4
PMY
1
1.00
1
C
0.00
9.243
-10.660
18.134
A
O4
PMY
1
HETATM
A
O4
PMY
1
1.00
1
O
0.00
9.501
-11.320
20.418
A
C5
PMY
1
HETATM
A
C5
PMY
1
1.00
1
C
0.00
11.068
-11.201
20.408
A
C6
PMY
1
HETATM
A
C6
PMY
1
1.00
1
C
0.00
11.606
-9.780
20.355
A
C7
PMY
1
HETATM
A
C7
PMY
1
1.00
1
C
0.00
11.105
-8.714
19.661
A
NE
PMY
1
HETATM
A
NE
PMY
1
1.00
1
N
0.00
11.788
-7.516
19.622
A
C8
PMY
1
HETATM
A
C8
PMY
1
1.00
1
C
0.00
12.762
-9.604
20.974
A
NG
PMY
1
HETATM
A
NG
PMY
1
1.00
1
N
0.00
13.467
-8.473
20.962
A
C10
PMY
1
HETATM
A
C10
PMY
1
1.00
1
C
0.00
12.999
-7.392
20.267
A
C9
PMY
1
HETATM
A
C9
PMY
1
1.00
1
C
0.00
11.206
-6.537
18.910
A
NF
PMY
1
HETATM
A
NF
PMY
1
1.00
1
N
0.00
13.817
-6.118
20.226
A
CA
PMY
1
HETATM
A
CA
PMY
1
1.00
1
C
0.00
14.767
-8.596
21.632
A
C12
PMY
1
HETATM
A
C12
PMY
1
1.00
1
C
0.00
15.522
-7.635
21.748
A
O12
PMY
1
HETATM
A
O12
PMY
1
1.00
1
O
0.00
15.093
-9.812
22.100
A
NH
PMY
1
HETATM
A
NH
PMY
1
1.00
1
N
0.00
16.360
-10.099
22.792
A
C13
PMY
1
HETATM
A
C13
PMY
1
1.00
1
C
0.00
16.113
-11.226
23.818
A
C14
PMY
1
HETATM
A
C14
PMY
1
1.00
1
C
0.00
15.187
-10.604
24.698
A
OH1
PMY
1
HETATM
A
OH1
PMY
1
1.00
1
O
0.00
15.530
-12.550
23.379
A
C27
PMY
1
HETATM
A
C27
PMY
1
1.00
1
C
0.00
14.352
-12.709
22.765
A
NJ
PMY
1
HETATM
A
NJ
PMY
1
1.00
1
N
0.00
16.081
-13.774
23.499
A
C28
PMY
1
HETATM
A
C28
PMY
1
1.00
1
C
0.00
14.182
-14.021
22.531
A
C29
PMY
1
HETATM
A
C29
PMY
1
1.00
1
C
0.00
15.252
-14.677
22.965
A
NI
PMY
1
HETATM
A
NI
PMY
1
1.00
1
N
0.00
17.501
-10.535
21.868
A
C30
PMY
1
HETATM
A
C30
PMY
1
1.00
1
C
0.00
18.603
-10.780
22.354
A
O30
PMY
1
HETATM
A
O30
PMY
1
1.00
1
O
0.00
17.245
-10.717
20.574
A
NK
PMY
1
HETATM
A
NK
PMY
1
1.00
1
N
0.00
18.138
-11.213
19.550
A
C31
PMY
1
HETATM
A
C31
PMY
1
1.00
1
C
0.00
18.594
-9.977
18.704
A
CB
PMY
1
HETATM
A
CB
PMY
1
1.00
1
C
0.00
17.271
-12.204
18.694
A
C33
PMY
1
HETATM
A
C33
PMY
1
1.00
1
C
0.00
18.026
-12.594
17.579
A
OH2
PMY
1
HETATM
A
OH2
PMY
1
1.00
1
O
0.00
16.886
-13.502
19.477
A
C34
PMY
1
HETATM
A
C34
PMY
1
1.00
1
C
0.00
18.161
-14.440
19.572
A
CC
PMY
1
HETATM
A
CC
PMY
1
1.00
1
C
0.00
15.717
-14.355
18.900
A
C36
PMY
1
HETATM
A
C36
PMY
1
1.00
1
C
0.00
15.767
-15.577
19.038
A
O36
PMY
1
HETATM
A
O36
PMY
1
1.00
1
O
0.00
14.664
-13.795
18.281
A
NL
PMY
1
HETATM
A
NL
PMY
1
1.00
1
N
0.00
13.496
-14.514
17.732
A
C37
PMY
1
HETATM
A
C37
PMY
1
1.00
1
C
0.00
12.538
-15.137
18.804
A
C38
PMY
1
HETATM
A
C38
PMY
1
1.00
1
C
0.00
12.287
-14.232
19.891
A
OH3
PMY
1
HETATM
A
OH3
PMY
1
1.00
1
O
0.00
12.989
-16.507
19.423
A
CD
PMY
1
HETATM
A
CD
PMY
1
1.00
1
C
0.00
12.627
-13.663
16.786
A
C40
PMY
1
HETATM
A
C40
PMY
1
1.00
1
C
0.00
12.062
-14.262
15.871
A
O40
PMY
1
HETATM
A
O40
PMY
1
1.00
1
O
0.00
12.474
-12.333
16.936
A
NM
PMY
1
HETATM
A
NM
PMY
1
1.00
1
N
0.00
11.661
-11.539
16.005
A
C41
PMY
1
HETATM
A
C41
PMY
1
1.00
1
C
0.00
12.515
-11.235
14.769
A
C42
PMY
1
HETATM
A
C42
PMY
1
1.00
1
C
0.00
13.577
-10.246
15.133
A
C43
PMY
1
HETATM
A
C43
PMY
1
1.00
1
C
0.00
15.327
-10.606
15.236
A
S43
PMY
1
HETATM
A
S43
PMY
1
1.00
1
S
0.00
15.545
-8.864
15.682
A
C44
PMY
1
HETATM
A
C44
PMY
1
1.00
1
C
0.00
13.296
-8.970
15.418
A
NN
PMY
1
HETATM
A
NN
PMY
1
1.00
1
N
0.00
14.360
-8.201
15.709
A
C45
PMY
1
HETATM
A
C45
PMY
1
1.00
1
C
0.00
14.215
-6.876
15.940
A
C46
PMY
1
HETATM
A
C46
PMY
1
1.00
1
C
0.00
12.621
-6.039
15.913
A
S46
PMY
1
HETATM
A
S46
PMY
1
1.00
1
S
0.00
13.502
-4.492
16.244
A
C47
PMY
1
HETATM
A
C47
PMY
1
1.00
1
C
0.00
15.213
-6.010
16.169
A
NO
PMY
1
HETATM
A
NO
PMY
1
1.00
1
N
0.00
14.836
-4.720
16.323
A
C48
PMY
1
HETATM
A
C48
PMY
1
1.00
1
C
0.00
15.868
-3.685
16.534
A
C49
PMY
1
HETATM
A
C49
PMY
1
1.00
1
C
0.00
17.034
-4.073
16.573
A
O49
PMY
1
HETATM
A
O49
PMY
1
1.00
1
O
0.00
15.596
-2.373
16.678
A
NP
PMY
1
HETATM
A
NP
PMY
1
1.00
1
N
0.00
16.658
-1.368
16.830
A
C51
PMY
1
HETATM
A
C51
PMY
1
1.00
1
C
0.00
16.914
-0.949
18.339
A
C52
PMY
1
HETATM
A
C52
PMY
1
1.00
1
C
0.00
16.860
-2.129
19.429
A
C53
PMY
1
HETATM
A
C53
PMY
1
1.00
1
C
0.00
17.832
-3.244
19.144
A
NQ
PMY
1
HETATM
A
NQ
PMY
1
1.00
1
N
0.00
19.307
-4.654
20.631
A
CE
PMY
1
HETATM
A
CE
PMY
1
1.00
1
C
0.00
19.254
-3.484
19.587
A
C54
PMY
1
HETATM
A
C54
PMY
1
1.00
1
C
0.00
20.126
-3.783
18.327
A
C56
PMY
1
HETATM
A
C56
PMY
1
1.00
1
C
0.00
19.712
-4.751
17.425
A
C57
PMY
1
HETATM
A
C57
PMY
1
1.00
1
C
0.00
20.442
-5.024
16.297
A
C58
PMY
1
HETATM
A
C58
PMY
1
1.00
1
C
0.00
21.602
-4.353
16.038
A
C59
PMY
1
HETATM
A
C59
PMY
1
1.00
1
C
0.00
22.027
-3.395
16.915
A
C60
PMY
1
HETATM
A
C60
PMY
1
1.00
1
C
0.00
21.304
-3.104
18.047
A
C61
PMY
1
HETATM
A
C61
PMY
1
1.00
1
C
0.00
9.480
-11.977
26.276
A
HA1
PMY
1
HETATM
A
HA1
PMY
1
1.00
1
H
0.00
9.088
-11.583
24.619
A
HA2
PMY
1
HETATM
A
HA2
PMY
1
1.00
1
H
0.00
10.822
-10.289
23.296
A
H2
PMY
1
HETATM
A
H2
PMY
1
1.00
1
H
0.00
13.441
-11.115
24.202
A
HB1
PMY
1
HETATM
A
HB1
PMY
1
1.00
1
H
0.00
12.864
-9.636
23.738
A
HB2
PMY
1
HETATM
A
HB2
PMY
1
1.00
1
H
0.00
10.743
-13.171
22.818
A
H3E
PMY
1
HETATM
A
H3E
PMY
1
1.00
1
H
0.00
12.355
-12.942
23.236
A
H3X
PMY
1
HETATM
A
H3X
PMY
1
1.00
1
H
0.00
12.043
-12.936
20.846
A
HNC
PMY
1
HETATM
A
HNC
PMY
1
1.00
1
H
0.00
7.632
-9.362
20.527
A
HD1
PMY
1
HETATM
A
HD1
PMY
1
1.00
1
H
0.00
7.710
-8.909
18.859
A
HD2
PMY
1
HETATM
A
HD2
PMY
1
1.00
1
H
0.00
9.128
-12.323
20.078
A
H5E
PMY
1
HETATM
A
H5E
PMY
1
1.00
1
H
0.00
9.082
-10.930
21.377
A
H5X
PMY
1
HETATM
A
H5X
PMY
1
1.00
1
H
0.00
11.374
-11.647
19.448
A
H6
PMY
1
HETATM
A
H6
PMY
1
1.00
1
H
0.00
11.622
-5.625
18.822
A
HF1
PMY
1
HETATM
A
HF1
PMY
1
1.00
1
H
0.00
10.320
-6.710
18.455
A
HF2
PMY
1
HETATM
A
HF2
PMY
1
1.00
1
H
0.00
14.814
-6.362
19.848
A
HAA
PMY
1
HETATM
A
HAA
PMY
1
1.00
1
H
0.00
13.931
-5.744
21.244
A
HAB
PMY
1
HETATM
A
HAB
PMY
1
1.00
1
H
0.00
13.409
-5.336
19.593
A
HAC
PMY
1
HETATM
A
HAC
PMY
1
1.00
1
H
0.00
16.685
-9.174
23.280
A
H13
PMY
1
HETATM
A
H13
PMY
1
1.00
1
H
0.00
17.062
-11.421
24.332
A
H14
PMY
1
HETATM
A
H14
PMY
1
1.00
1
H
0.00
15.550
-9.740
24.930
A
HO1
PMY
1
HETATM
A
HO1
PMY
1
1.00
1
H
0.00
17.016
-14.029
23.939
A
H28
PMY
1
HETATM
A
H28
PMY
1
1.00
1
H
0.00
13.360
-14.504
22.065
A
H29
PMY
1
HETATM
A
H29
PMY
1
1.00
1
H
0.00
15.400
-15.676
22.893
A
HNI
PMY
1
HETATM
A
HNI
PMY
1
1.00
1
H
0.00
16.327
-10.548
20.227
A
HNK
PMY
1
HETATM
A
HNK
PMY
1
1.00
1
H
0.00
18.978
-11.741
20.069
A
H31
PMY
1
HETATM
A
H31
PMY
1
1.00
1
H
0.00
17.726
-9.404
18.357
A
HBA
PMY
1
HETATM
A
HBA
PMY
1
1.00
1
H
0.00
19.152
-10.278
17.818
A
HBB
PMY
1
HETATM
A
HBB
PMY
1
1.00
1
H
0.00
19.217
-9.271
19.267
A
HBC
PMY
1
HETATM
A
HBC
PMY
1
1.00
1
H
0.00
16.400
-11.674
18.273
A
H33
PMY
1
HETATM
A
H33
PMY
1
1.00
1
H
0.00
17.514
-13.203
17.038
A
HO2
PMY
1
HETATM
A
HO2
PMY
1
1.00
1
H
0.00
16.433
-13.097
20.417
A
H34
PMY
1
HETATM
A
H34
PMY
1
1.00
1
H
0.00
18.497
-14.751
18.571
A
HCA
PMY
1
HETATM
A
HCA
PMY
1
1.00
1
H
0.00
17.999
-15.398
20.081
A
HCB
PMY
1
HETATM
A
HCB
PMY
1
1.00
1
H
0.00
19.049
-13.990
20.025
A
HCC
PMY
1
HETATM
A
HCC
PMY
1
1.00
1
H
0.00
14.676
-12.797
18.181
A
HNL
PMY
1
HETATM
A
HNL
PMY
1
1.00
1
H
0.00
13.889
-15.283
17.061
A
H37
PMY
1
HETATM
A
H37
PMY
1
1.00
1
H
0.00
11.549
-15.215
18.307
A
H38
PMY
1
HETATM
A
H38
PMY
1
1.00
1
H
0.00
11.624
-14.632
20.463
A
HO3
PMY
1
HETATM
A
HO3
PMY
1
1.00
1
H
0.00
13.833
-16.394
20.111
A
HDA
PMY
1
HETATM
A
HDA
PMY
1
1.00
1
H
0.00
13.298
-17.233
18.666
A
HDB
PMY
1
HETATM
A
HDB
PMY
1
1.00
1
H
0.00
12.196
-17.002
19.996
A
HDC
PMY
1
HETATM
A
HDC
PMY
1
1.00
1
H
0.00
12.956
-11.857
17.683
A
HNM
PMY
1
HETATM
A
HNM
PMY
1
1.00
1
H
0.00
11.343
-10.578
16.436
A
H1E
PMY
1
HETATM
A
H1E
PMY
1
1.00
1
H
0.00
10.777
-12.125
15.711
A
H1X
PMY
1
HETATM
A
H1X
PMY
1
1.00
1
H
0.00
11.945
-10.788
13.949
A
H2E
PMY
1
HETATM
A
H2E
PMY
1
1.00
1
H
0.00
12.951
-12.168
14.415
A
H2X
PMY
1
HETATM
A
H2X
PMY
1
1.00
1
H
0.00
16.513
-8.431
15.863
A
H44
PMY
1
HETATM
A
H44
PMY
1
1.00
1
H
0.00
12.994
-3.544
16.330
A
H47
PMY
1
HETATM
A
H47
PMY
1
1.00
1
H
0.00
14.640
-2.047
16.665
A
HNP
PMY
1
HETATM
A
HNP
PMY
1
1.00
1
H
0.00
16.359
-0.515
16.194
A
H6E
PMY
1
HETATM
A
H6E
PMY
1
1.00
1
H
0.00
17.552
-1.709
16.286
A
H6X
PMY
1
HETATM
A
H6X
PMY
1
1.00
1
H
0.00
16.181
-0.110
18.502
A
H7E
PMY
1
HETATM
A
H7E
PMY
1
1.00
1
H
0.00
17.934
-0.498
18.412
A
H7X
PMY
1
HETATM
A
H7X
PMY
1
1.00
1
H
0.00
15.891
-2.642
19.219
A
H8E
PMY
1
HETATM
A
H8E
PMY
1
1.00
1
H
0.00
16.889
-1.847
20.540
A
H8X
PMY
1
HETATM
A
H8X
PMY
1
1.00
1
H
0.00
17.635
-3.606
18.213
A
HNQ
PMY
1
HETATM
A
HNQ
PMY
1
1.00
1
H
0.00
18.952
-5.610
20.240
A
HEA
PMY
1
HETATM
A
HEA
PMY
1
1.00
1
H
0.00
18.706
-4.436
21.520
A
HEB
PMY
1
HETATM
A
HEB
PMY
1
1.00
1
H
0.00
20.323
-4.829
21.006
A
HEC
PMY
1
HETATM
A
HEC
PMY
1
1.00
1
H
0.00
19.600
-2.627
20.191
A
H54
PMY
1
HETATM
A
H54
PMY
1
1.00
1
H
0.00
18.782
-5.318
17.575
A
H57
PMY
1
HETATM
A
H57
PMY
1
1.00
1
H
0.00
20.104
-5.775
15.588
A
H58
PMY
1
HETATM
A
H58
PMY
1
1.00
1
H
0.00
22.185
-4.580
15.133
A
H59
PMY
1
HETATM
A
H59
PMY
1
1.00
1
H
0.00
22.952
-2.872
16.688
A
H60
PMY
1
HETATM
A
H60
PMY
1
1.00
1
H
0.00
21.710
-2.315
18.692
A
H61
PMY
1
HETATM
A
H61
PMY
1
1.00
1
H
0.00
13.615
-11.085
21.722
A
CO
3CO
2
HETATM
B
CO
3CO
2
1.00
1
CO
0.00
14.261
-11.497
19.888
A
O1
PEO
3
HETATM
C
O1
PEO
3
1.00
1
O
0.00
14.547
-10.382
19.008
A
O2
PEO
3
HETATM
C
O2
PEO
3
1.00
1
O
0.00
13.747
-9.919
18.776
A
HO2
PEO
3
HETATM
C
HO2
PEO
3
1.00
1
H
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Caceres-Cortes, J.
Sugiyama, H.
Ikudome, K.
Saito, I.
Wang, A.H.-J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
Co 3
58.933
COBALT (III) ION
non-polymer
H2 O2
34.015
HYDROGEN PEROXIDE
non-polymer
C48 H67 N17 O10 S2
1106.283
AGLYCON OF PEPLOMYCIN
AGLYCON OF (S)-N1-[3-[(1-PHENYLETHYL)AMINO]-PROPYL]BLEOMYCINAMIDE
non-polymer
N
1
N
CO
N
2
N
O
N
3
N
O
N
4
N
H
N
5
N
H
N
6
N
N
N
7
N
C
N
8
N
O
N
9
S
C
N
10
N
N
N
11
N
C
N
12
N
N
N
13
N
N
N
14
N
C
N
15
N
O
N
16
N
C
N
17
S
C
Y
18
N
C
Y
19
N
N
Y
20
N
C
Y
21
N
N
Y
22
N
C
Y
23
N
C
N
24
N
N
N
25
N
C
N
26
N
C
N
27
N
O
N
28
N
N
N
29
S
C
N
30
R
C
N
31
N
O
Y
32
N
C
Y
33
N
N
Y
34
N
C
Y
35
N
C
Y
36
N
N
N
37
N
C
N
38
N
O
N
39
N
N
N
40
R
C
N
41
N
C
N
42
S
C
N
43
N
O
N
44
S
C
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
S
C
N
50
R
C
N
51
N
O
N
52
N
C
N
53
N
C
N
54
N
O
N
55
N
N
N
56
N
C
N
57
N
C
Y
58
N
C
Y
59
N
S
Y
60
N
C
Y
61
N
N
Y
62
N
C
Y
63
N
C
Y
64
N
S
Y
65
N
C
Y
66
N
N
Y
67
N
C
N
68
N
C
N
69
N
O
N
70
N
N
N
71
N
C
N
72
N
C
N
73
N
C
N
74
N
N
N
75
N
C
N
76
S
C
Y
77
N
C
Y
78
N
C
Y
79
N
C
Y
80
N
C
Y
81
N
C
Y
82
N
C
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
doub
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
Y
29
N
doub
Y
30
N
sing
Y
31
N
sing
Y
32
N
doub
N
33
N
sing
Y
34
N
doub
Y
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
doub
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
Y
54
N
sing
Y
55
N
doub
Y
56
N
doub
Y
57
N
sing
N
58
N
sing
Y
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
doub
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
doub
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
doub
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
doub
Y
108
N
sing
Y
109
N
doub
N
110
N
sing
Y
111
N
sing
Y
112
N
sing
Y
113
N
sing
Y
114
N
doub
Y
115
N
sing
Y
116
N
doub
N
117
N
sing
Y
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
Y
141
N
doub
Y
142
N
sing
Y
143
N
sing
N
144
N
sing
Y
145
N
doub
N
146
N
sing
Y
147
N
sing
N
148
N
sing
Y
149
N
doub
N
150
N
sing
N
151
N
sing
IX
Eur.J.Biochem.
EJBCAI
0262
0014-2956
244
818
828
10.1111/j.1432-1033.1997.00818.x
9108252
Structures of cobalt(III)-pepleomycin and cobalt(III)-deglycopepleomycin (green forms) determined by NMR studies.
1997
10.2210/pdb1ao2/pdb
pdb_00001ao2
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1106.283
AGLYCON OF PEPLOMYCIN
1
syn
non-polymer
58.933
COBALT (III) ION
1
syn
non-polymer
a derivative of bleomycin from Streptomyces verticillus
34.015
HYDROGEN PEROXIDE
1
syn
non-polymer
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conn
struct_site
chem_comp_atom
chem_comp_bond
entity
pdbx_entity_src_syn
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Data collection
Source and taxonomy
Structure summary
1
0
1999-07-30
1
1
2008-04-26
1
2
2011-07-13
1
3
2022-03-23
1
4
2023-12-27
1
5
2024-03-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_entity.details
RCSB
Y
RCSB
1997-07-16
REL
REL
PMY
AGLYCON OF PEPLOMYCIN
3CO
COBALT (III) ION
PEO
HYDROGEN PEROXIDE
method used to determine the structure : NOE-RMD
minimal energy
1
1
2D NOESY
TOCSY
DQF-COSY
6.4
1
atm
275
K
Refinement details can be found in the JRNL citation
1
minimized average
50mM sodium phosphate, 0.15 M NaCl
H2O
A.T.Brunger
refinement
X-PLOR
3.1
refinement
SPEDREF
500
Varian
VXR 500
PMY
1
1
PMY
PMY
1
A
3CO
2
2
3CO
3CO
2
A
PEO
3
3
PEO
PEO
3
A
author_defined_assembly
1
monomeric
A
PMY
1
A
NB
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
A
PMY
1
A
NC
PMY
1_555
87.7
A
PMY
1
A
NB
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
A
PMY
1
A
NG
PMY
1_555
90.3
A
PMY
1
A
NC
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
A
PMY
1
A
NG
PMY
1_555
85.4
A
PMY
1
A
NB
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
A
PMY
1
A
NH
PMY
1_555
87.7
A
PMY
1
A
NC
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
A
PMY
1
A
NH
PMY
1_555
169.0
A
PMY
1
A
NG
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
A
PMY
1
A
NH
PMY
1_555
84.7
A
PMY
1
A
NB
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
A
PMY
1
A
NJ
PMY
1_555
82.1
A
PMY
1
A
NC
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
A
PMY
1
A
NJ
PMY
1_555
91.0
A
PMY
1
A
NG
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
A
PMY
1
A
NJ
PMY
1_555
171.7
A
PMY
1
A
NH
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
A
PMY
1
A
NJ
PMY
1_555
98.2
A
PMY
1
A
NB
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
A
PEO
3
C
O1
PEO
1_555
176.5
A
PMY
1
A
NC
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
A
PEO
3
C
O1
PEO
1_555
90.3
A
PMY
1
A
NG
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
A
PEO
3
C
O1
PEO
1_555
86.7
A
PMY
1
A
NH
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
A
PEO
3
C
O1
PEO
1_555
93.8
A
PMY
1
A
NJ
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
A
PEO
3
C
O1
PEO
1_555
100.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
cobalt(III)-deglycopepleomycin determined by NMR studies
1
N
N
2
N
N
3
N
N
metalc
1.997
A
PMY
1
A
NB
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
metalc
1.999
A
PMY
1
A
NC
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
metalc
1.866
A
PMY
1
A
NG
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
metalc
1.987
A
PMY
1
A
NH
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
metalc
2.066
A
PMY
1
A
NJ
PMY
1_555
A
3CO
2
B
CO
3CO
1_555
metalc
1.988
A
3CO
2
B
CO
3CO
1_555
A
PEO
3
C
O1
PEO
1_555
INHIBITOR
anticancer drugs, deglycosylated pepleomycin, peplomycin, bleomycin, DNA, two-dimensional NMR, solution structures, INHIBITOR
BINDING SITE FOR RESIDUE PMY A 1
A
PMY
1
Software
2
BINDING SITE FOR RESIDUE 3CO A 2
A
3CO
2
Software
2
BINDING SITE FOR RESIDUE PEO A 3
A
PEO
3
Software
2
A
3CO
2
B
3CO
2
1_555
A
PEO
3
C
PEO
2
1_555
A
PMY
1
A
PMY
2
1_555
A
PEO
3
C
PEO
2
1_555
A
PMY
1
A
PMY
2
1_555
A
3CO
2
B
3CO
2
1_555
1
P 1