0.021231 0.000000 0.000000 0.000000 0.008598 0.000000 0.000000 0.000000 0.020161 0.00000 0.00000 0.00000 CIS PROLINE - PRO 52 Ago, H. Kataoka, J. Tsuge, H. Habuka, N. Inagaki, E. Noma, M. Miyano, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 47.100 116.300 49.600 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking IX Eur.J.Biochem. EJBCAI 0262 0014-2956 225 369 374 10.1111/j.1432-1033.1994.00369.x 7925458 X-ray structure of a pokeweed antiviral protein, coded by a new genomic clone, at 0.23 nm resolution. A model structure provides a suitable electrostatic field for substrate binding. 1994 NE FEBS Lett. FEBLAL 0165 0014-5793 320 31 Expression of a Pokeweed Antiviral Protein in Escherichia Coli and its Characterization 1993 NE Plant Mol.Biol. PMBIDB 2006 0167-4412 20 879 Isolation and Analysis of a Genomic Clone Encoding a Pokeweed Antiviral Protein 1992 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 29766.078 POKEWEED ANTIVIRAL PROTEIN 1 man polymer 18.015 water 95 nat water no no APTLEINTITFDVGNATINKYATFMKSIHNQAKDPTLKCYGIPMLPNTNLTPKYLLVTLQDSSLKTITLMLKRNNLYVMG YADTYNGKCRYHIFKDISNTTERNDVMTTLCPNPSSRVGKNINYDSSYPALEKKVGRPRSQVQLGIQILNSGIGKIYGVD SFTEKTEAEFLLVAIQMVSEAARFKYIENQVKTNFNRAFYPNAKVLNLEESWGKISTAIHNAKNGALTSPLELKNANGSK WIVLRVDDIEPDVGLLKYVNGTCQAT APTLEINTITFDVGNATINKYATFMKSIHNQAKDPTLKCYGIPMLPNTNLTPKYLLVTLQDSSLKTITLMLKRNNLYVMG YADTYNGKCRYHIFKDISNTTERNDVMTTLCPNPSSRVGKNINYDSSYPALEKKVGRPRSQVQLGIQILNSGIGKIYGVD SFTEKTEAEFLLVAIQMVSEAARFKYIENQVKTNFNRAFYPNAKVLNLEESWGKISTAIHNAKNGALTSPLELKNANGSK WIVLRVDDIEPDVGLLKYVNGTCQAT A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n American pokeweed Phytolacca sample 3527 Phytolacca americana 2.28 46.08 pdbx_database_status struct_conf struct_conf_type repository Initial release Version format compliance Version format compliance Derived calculations Other 1 0 1994-01-31 1 1 2008-03-24 1 2 2011-07-13 1 3 2017-11-29 _pdbx_database_status.process_site Y BNL 1993-09-21 REL HOH water HOH 267 2 HOH HOH 267 A HOH 268 2 HOH HOH 268 A HOH 269 2 HOH HOH 269 A HOH 270 2 HOH HOH 270 A HOH 271 2 HOH HOH 271 A HOH 272 2 HOH HOH 272 A HOH 273 2 HOH HOH 273 A HOH 274 2 HOH HOH 274 A HOH 275 2 HOH HOH 275 A HOH 276 2 HOH HOH 276 A HOH 277 2 HOH HOH 277 A HOH 278 2 HOH HOH 278 A HOH 279 2 HOH HOH 279 A HOH 280 2 HOH HOH 280 A HOH 281 2 HOH HOH 281 A HOH 282 2 HOH HOH 282 A HOH 283 2 HOH HOH 283 A HOH 284 2 HOH HOH 284 A HOH 285 2 HOH HOH 285 A HOH 286 2 HOH HOH 286 A HOH 287 2 HOH HOH 287 A HOH 288 2 HOH HOH 288 A HOH 289 2 HOH HOH 289 A HOH 290 2 HOH HOH 290 A HOH 291 2 HOH HOH 291 A HOH 292 2 HOH HOH 292 A HOH 293 2 HOH HOH 293 A HOH 294 2 HOH HOH 294 A HOH 295 2 HOH HOH 295 A HOH 296 2 HOH HOH 296 A HOH 297 2 HOH HOH 297 A HOH 298 2 HOH HOH 298 A HOH 299 2 HOH HOH 299 A HOH 300 2 HOH HOH 300 A HOH 301 2 HOH HOH 301 A HOH 302 2 HOH HOH 302 A HOH 303 2 HOH HOH 303 A HOH 304 2 HOH HOH 304 A HOH 305 2 HOH HOH 305 A HOH 306 2 HOH HOH 306 A HOH 307 2 HOH HOH 307 A HOH 308 2 HOH HOH 308 A HOH 309 2 HOH HOH 309 A HOH 310 2 HOH HOH 310 A HOH 311 2 HOH HOH 311 A HOH 312 2 HOH HOH 312 A HOH 313 2 HOH HOH 313 A HOH 314 2 HOH HOH 314 A HOH 315 2 HOH HOH 315 A HOH 316 2 HOH HOH 316 A HOH 317 2 HOH HOH 317 A HOH 318 2 HOH HOH 318 A HOH 319 2 HOH HOH 319 A HOH 320 2 HOH HOH 320 A HOH 321 2 HOH HOH 321 A HOH 322 2 HOH HOH 322 A HOH 323 2 HOH HOH 323 A HOH 324 2 HOH HOH 324 A HOH 325 2 HOH HOH 325 A HOH 326 2 HOH HOH 326 A HOH 327 2 HOH HOH 327 A HOH 328 2 HOH HOH 328 A HOH 329 2 HOH HOH 329 A HOH 330 2 HOH HOH 330 A HOH 331 2 HOH HOH 331 A HOH 332 2 HOH HOH 332 A HOH 333 2 HOH HOH 333 A HOH 334 2 HOH HOH 334 A HOH 335 2 HOH HOH 335 A HOH 336 2 HOH HOH 336 A HOH 337 2 HOH HOH 337 A HOH 338 2 HOH HOH 338 A HOH 339 2 HOH HOH 339 A HOH 340 2 HOH HOH 340 A HOH 341 2 HOH HOH 341 A HOH 342 2 HOH HOH 342 A HOH 343 2 HOH HOH 343 A HOH 344 2 HOH HOH 344 A HOH 345 2 HOH HOH 345 A HOH 346 2 HOH HOH 346 A HOH 347 2 HOH HOH 347 A HOH 348 2 HOH HOH 348 A HOH 349 2 HOH HOH 349 A HOH 350 2 HOH HOH 350 A HOH 351 2 HOH HOH 351 A HOH 352 2 HOH HOH 352 A HOH 353 2 HOH HOH 353 A HOH 354 2 HOH HOH 354 A HOH 355 2 HOH HOH 355 A HOH 356 2 HOH HOH 356 A HOH 357 2 HOH HOH 357 A HOH 358 2 HOH HOH 358 A HOH 359 2 HOH HOH 359 A HOH 360 2 HOH HOH 360 A HOH 361 2 HOH HOH 361 A n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A ILE 6 n 6 ILE 6 A ASN 7 n 7 ASN 7 A THR 8 n 8 THR 8 A ILE 9 n 9 ILE 9 A THR 10 n 10 THR 10 A PHE 11 n 11 PHE 11 A ASP 12 n 12 ASP 12 A VAL 13 n 13 VAL 13 A GLY 14 n 14 GLY 14 A ASN 15 n 15 ASN 15 A ALA 16 n 16 ALA 16 A THR 17 n 17 THR 17 A ILE 18 n 18 ILE 18 A ASN 19 n 19 ASN 19 A LYS 20 n 20 LYS 20 A TYR 21 n 21 TYR 21 A ALA 22 n 22 ALA 22 A THR 23 n 23 THR 23 A PHE 24 n 24 PHE 24 A MET 25 n 25 MET 25 A LYS 26 n 26 LYS 26 A SER 27 n 27 SER 27 A ILE 28 n 28 ILE 28 A HIS 29 n 29 HIS 29 A ASN 30 n 30 ASN 30 A GLN 31 n 31 GLN 31 A ALA 32 n 32 ALA 32 A LYS 33 n 33 LYS 33 A ASP 34 n 34 ASP 34 A PRO 35 n 35 PRO 35 A THR 36 n 36 THR 36 A LEU 37 n 37 LEU 37 A LYS 38 n 38 LYS 38 A CYS 39 n 39 CYS 39 A TYR 40 n 40 TYR 40 A GLY 41 n 41 GLY 41 A ILE 42 n 42 ILE 42 A PRO 43 n 43 PRO 43 A MET 44 n 44 MET 44 A LEU 45 n 45 LEU 45 A PRO 46 n 46 PRO 46 A ASN 47 n 47 ASN 47 A THR 48 n 48 THR 48 A ASN 49 n 49 ASN 49 A LEU 50 n 50 LEU 50 A THR 51 n 51 THR 51 A PRO 52 n 52 PRO 52 A LYS 53 n 53 LYS 53 A TYR 54 n 54 TYR 54 A LEU 55 n 55 LEU 55 A LEU 56 n 56 LEU 56 A VAL 57 n 57 VAL 57 A THR 58 n 58 THR 58 A LEU 59 n 59 LEU 59 A GLN 60 n 60 GLN 60 A ASP 61 n 61 ASP 61 A SER 62 n 62 SER 62 A SER 63 n 63 SER 63 A LEU 64 n 64 LEU 64 A LYS 65 n 65 LYS 65 A THR 66 n 66 THR 66 A ILE 67 n 67 ILE 67 A THR 68 n 68 THR 68 A LEU 69 n 69 LEU 69 A MET 70 n 70 MET 70 A LEU 71 n 71 LEU 71 A LYS 72 n 72 LYS 72 A ARG 73 n 73 ARG 73 A ASN 74 n 74 ASN 74 A ASN 75 n 75 ASN 75 A LEU 76 n 76 LEU 76 A TYR 77 n 77 TYR 77 A VAL 78 n 78 VAL 78 A MET 79 n 79 MET 79 A GLY 80 n 80 GLY 80 A TYR 81 n 81 TYR 81 A ALA 82 n 82 ALA 82 A ASP 83 n 83 ASP 83 A THR 84 n 84 THR 84 A TYR 85 n 85 TYR 85 A ASN 86 n 86 ASN 86 A GLY 87 n 87 GLY 87 A LYS 88 n 88 LYS 88 A CYS 89 n 89 CYS 89 A ARG 90 n 90 ARG 90 A TYR 91 n 91 TYR 91 A HIS 92 n 92 HIS 92 A ILE 93 n 93 ILE 93 A PHE 94 n 94 PHE 94 A LYS 95 n 95 LYS 95 A ASP 96 n 96 ASP 96 A ILE 97 n 97 ILE 97 A SER 98 n 98 SER 98 A ASN 99 n 99 ASN 99 A THR 100 n 100 THR 100 A THR 101 n 101 THR 101 A GLU 102 n 102 GLU 102 A ARG 103 n 103 ARG 103 A ASN 104 n 104 ASN 104 A ASP 105 n 105 ASP 105 A VAL 106 n 106 VAL 106 A MET 107 n 107 MET 107 A THR 108 n 108 THR 108 A THR 109 n 109 THR 109 A LEU 110 n 110 LEU 110 A CYS 111 n 111 CYS 111 A PRO 112 n 112 PRO 112 A ASN 113 n 113 ASN 113 A PRO 114 n 114 PRO 114 A SER 115 n 115 SER 115 A SER 116 n 116 SER 116 A ARG 117 n 117 ARG 117 A VAL 118 n 118 VAL 118 A GLY 119 n 119 GLY 119 A LYS 120 n 120 LYS 120 A ASN 121 n 121 ASN 121 A ILE 122 n 122 ILE 122 A ASN 123 n 123 ASN 123 A TYR 124 n 124 TYR 124 A ASP 125 n 125 ASP 125 A SER 126 n 126 SER 126 A SER 127 n 127 SER 127 A TYR 128 n 128 TYR 128 A PRO 129 n 129 PRO 129 A ALA 130 n 130 ALA 130 A LEU 131 n 131 LEU 131 A GLU 132 n 132 GLU 132 A LYS 133 n 133 LYS 133 A LYS 134 n 134 LYS 134 A VAL 135 n 135 VAL 135 A GLY 136 n 136 GLY 136 A ARG 137 n 137 ARG 137 A PRO 138 n 138 PRO 138 A ARG 139 n 139 ARG 139 A SER 140 n 140 SER 140 A GLN 141 n 141 GLN 141 A VAL 142 n 142 VAL 142 A GLN 143 n 143 GLN 143 A LEU 144 n 144 LEU 144 A GLY 145 n 145 GLY 145 A ILE 146 n 146 ILE 146 A GLN 147 n 147 GLN 147 A ILE 148 n 148 ILE 148 A LEU 149 n 149 LEU 149 A ASN 150 n 150 ASN 150 A SER 151 n 151 SER 151 A GLY 152 n 152 GLY 152 A ILE 153 n 153 ILE 153 A GLY 154 n 154 GLY 154 A LYS 155 n 155 LYS 155 A ILE 156 n 156 ILE 156 A TYR 157 n 157 TYR 157 A GLY 158 n 158 GLY 158 A VAL 159 n 159 VAL 159 A ASP 160 n 160 ASP 160 A SER 161 n 161 SER 161 A PHE 162 n 162 PHE 162 A THR 163 n 163 THR 163 A GLU 164 n 164 GLU 164 A LYS 165 n 165 LYS 165 A THR 166 n 166 THR 166 A GLU 167 n 167 GLU 167 A ALA 168 n 168 ALA 168 A GLU 169 n 169 GLU 169 A PHE 170 n 170 PHE 170 A LEU 171 n 171 LEU 171 A LEU 172 n 172 LEU 172 A VAL 173 n 173 VAL 173 A ALA 174 n 174 ALA 174 A ILE 175 n 175 ILE 175 A GLN 176 n 176 GLN 176 A MET 177 n 177 MET 177 A VAL 178 n 178 VAL 178 A SER 179 n 179 SER 179 A GLU 180 n 180 GLU 180 A ALA 181 n 181 ALA 181 A ALA 182 n 182 ALA 182 A ARG 183 n 183 ARG 183 A PHE 184 n 184 PHE 184 A LYS 185 n 185 LYS 185 A TYR 186 n 186 TYR 186 A ILE 187 n 187 ILE 187 A GLU 188 n 188 GLU 188 A ASN 189 n 189 ASN 189 A GLN 190 n 190 GLN 190 A VAL 191 n 191 VAL 191 A LYS 192 n 192 LYS 192 A THR 193 n 193 THR 193 A ASN 194 n 194 ASN 194 A PHE 195 n 195 PHE 195 A ASN 196 n 196 ASN 196 A ARG 197 n 197 ARG 197 A ALA 198 n 198 ALA 198 A PHE 199 n 199 PHE 199 A TYR 200 n 200 TYR 200 A PRO 201 n 201 PRO 201 A ASN 202 n 202 ASN 202 A ALA 203 n 203 ALA 203 A LYS 204 n 204 LYS 204 A VAL 205 n 205 VAL 205 A LEU 206 n 206 LEU 206 A ASN 207 n 207 ASN 207 A LEU 208 n 208 LEU 208 A GLU 209 n 209 GLU 209 A GLU 210 n 210 GLU 210 A SER 211 n 211 SER 211 A TRP 212 n 212 TRP 212 A GLY 213 n 213 GLY 213 A LYS 214 n 214 LYS 214 A ILE 215 n 215 ILE 215 A SER 216 n 216 SER 216 A THR 217 n 217 THR 217 A ALA 218 n 218 ALA 218 A ILE 219 n 219 ILE 219 A HIS 220 n 220 HIS 220 A ASN 221 n 221 ASN 221 A ALA 222 n 222 ALA 222 A LYS 223 n 223 LYS 223 A ASN 224 n 224 ASN 224 A GLY 225 n 225 GLY 225 A ALA 226 n 226 ALA 226 A LEU 227 n 227 LEU 227 A THR 228 n 228 THR 228 A SER 229 n 229 SER 229 A PRO 230 n 230 PRO 230 A LEU 231 n 231 LEU 231 A GLU 232 n 232 GLU 232 A LEU 233 n 233 LEU 233 A LYS 234 n 234 LYS 234 A ASN 235 n 235 ASN 235 A ALA 236 n 236 ALA 236 A ASN 237 n 237 ASN 237 A GLY 238 n 238 GLY 238 A SER 239 n 239 SER 239 A LYS 240 n 240 LYS 240 A TRP 241 n 241 TRP 241 A ILE 242 n 242 ILE 242 A VAL 243 n 243 VAL 243 A LEU 244 n 244 LEU 244 A ARG 245 n 245 ARG 245 A VAL 246 n 246 VAL 246 A ASP 247 n 247 ASP 247 A ASP 248 n 248 ASP 248 A ILE 249 n 249 ILE 249 A GLU 250 n 250 GLU 250 A PRO 251 n 251 PRO 251 A ASP 252 n 252 ASP 252 A VAL 253 n 253 VAL 253 A GLY 254 n 254 GLY 254 A LEU 255 n 255 LEU 255 A LEU 256 n 256 LEU 256 A LYS 257 n 257 LYS 257 A TYR 258 n 258 TYR 258 A VAL 259 n 259 VAL 259 A ASN 260 n 260 ASN 260 A GLY 261 n 261 GLY 261 A THR 262 n 262 THR 262 A CYS 263 n 263 CYS 263 A GLN 264 n 264 GLN 264 A ALA 265 n 265 ALA 265 A THR 266 n 266 THR 266 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A ALA 1 A ALA 1 1 Y 1 A PRO 2 A PRO 2 1 Y 1 A THR 3 A THR 3 1 Y 1 A LEU 4 A LEU 4 1 Y 1 A GLU 5 A GLU 5 1 Y 1 -22.36 2.70 111.00 88.64 A A A N CA C ASN ASN ASN 7 7 7 N 1 15.52 2.30 115.30 130.82 A A A CA CB CG LEU LEU LEU 71 71 71 N 1 A LEU 64 58.39 9.85 1 A ASN 75 -146.46 -8.16 1 A ASN 86 74.73 -104.67 1 A PRO 114 -56.82 173.61 1 A SER 115 28.47 60.90 1 A SER 116 177.30 37.82 1 A ASN 121 -45.57 150.51 1 A ASN 123 -71.90 26.01 1 A SER 126 -91.59 58.89 1 A ARG 137 161.90 135.04 1 A THR 163 119.03 139.72 1 A VAL 178 -127.47 -64.21 1 A PRO 230 -41.07 155.07 0.172 0.172 2.3 1 2.3 95 2149 0 0 2054 0.019 2.2 model building X-PLOR refinement X-PLOR phasing X-PLOR POKEWEED ANTIVIRAL PROTEIN (ALPHA) X-RAY STRUCTURE OF A POKEWEED ANTIVIRAL PROTEIN, CODED BY A NEW GENOMIC CLONE, AT 0.23 NM RESOLUTION. A MODEL STRUCTURE PROVIDES A SUITABLE ELECTROSTATIC FIELD FOR SUBSTRATE BINDING. 1 N N 2 N N A ILE 18 A ILE 18 HELX_P A ALA 32 A ALA 32 1 H1 15 A THR 100 A THR 100 HELX_P A LEU 110 A LEU 110 1 H2 11 A TYR 128 A TYR 128 HELX_P A VAL 135 A VAL 135 1 H3 8 A ILE 146 A ILE 146 HELX_P A ILE 156 A ILE 156 1 H4 11 A GLU 164 A GLU 164 HELX_P A ARG 183 A ARG 183 1 H5 20 A TYR 186 A TYR 186 HELX_P A THR 193 A THR 193 1 H6 8 A ALA 203 A ALA 203 HELX_P A ASN 221 A ASN 221 1 H7 19 A VAL 246 A VAL 246 HELX_P A ASP 252 A ASP 252 1 H8 7 disulf 2.025 A CYS 39 A SG CYS 39 1_555 A CYS 263 A SG CYS 263 1_555 disulf 2.020 A CYS 89 A SG CYS 89 1_555 A CYS 111 A SG CYS 111 1_555 ANTIVIRAL PROTEIN ANTIVIRAL PROTEIN, GENOMIC CLONE A THR 51 A THR 51 1 A PRO 52 A PRO 52 0.49 RIPA_PHYAM UNP 1 1 Q03464 MKMMVVVVVMMLSWLILKPPSTWAINTITFDVGNATINKYATFMKSIHNQAKDPTLKCYGIPMLPNTNLTPKYLLVTLQD SSLKTITLMLKRNNLYVMGYADTYNGKCRYHIFKDISNTTERNDVMTTLCPNPSSRVGKNINYDSSYPALEKKVGRPRSQ VQLGIQILNSGIGKIYGVDSFTEKTEAEFLLVAIQMVSEAARFKYIENQVKTNFNRAFYPNAKVLNLEESWGKISTAIHN AKNGALTSPLELKNANGSKWIVLRVDDIEPDVGLLKYVNGTCQATYQSAMFPHL 22 285 1APA 3 266 Q03464 A 1 3 266 1 TRP CONFLICT LEU 4 1APA A Q03464 UNP 23 4 1 ALA CONFLICT GLU 5 1APA A Q03464 UNP 24 5 6 2 parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel A ILE 9 A ILE 9 A VAL 13 A VAL 13 A TYR 54 A TYR 54 A GLN 60 A GLN 60 A THR 66 A THR 66 A LYS 72 A LYS 72 A VAL 78 A VAL 78 A THR 84 A THR 84 A CYS 89 A CYS 89 A PHE 94 A PHE 94 A ARG 117 A ARG 117 A GLY 119 A GLY 119 A LEU 231 A LEU 231 A LYS 234 A LYS 234 A LYS 240 A LYS 240 A VAL 243 A VAL 243 18 P 21 21 2