0.017188 0.000000 0.009488 0.000000 0.018587 0.000000 0.000000 0.000000 0.026626 0.00000 0.00000 0.00000 Ramasubbu, N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 118.90 90.00 58.180 53.800 42.900 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cu 2 63.546 COPPER (II) ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 94 9620 9625 10.1073/pnas.94.18.9620 9275172 Crystal structures of the copper and nickel complexes of RNase A: metal-induced interprotein interactions and identification of a novel copper binding motif. 1997 10.2210/pdb1aqp/pdb pdb_00001aqp 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 287 1 COLLIMATOR IMAGE PLATE 1996-10 MARRESEARCH NI M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU COPPER COMPLEX 13708.326 RIBONUCLEASE A 3.1.27.5 1 nat polymer 63.546 COPPER (II) ION 2 syn non-polymer 18.015 water 83 nat water RNASE A no no KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMS ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMS ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n cattle Bos sample 9913 PANCREAS Bos taurus 1 2.18 45. 5.5 ENZYME WAS CRYSTALLIZED FROM MPD WITH 6 MOLAR EXCESS OF COPPER, pH 5.5 database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_site repository Initial release Version format compliance Version format compliance Database references Derived calculations Refinement description 1 0 1998-05-27 1 1 2008-03-24 1 2 2011-07-13 1 3 2023-08-02 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_symmetry _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1997-07-31 REL REL CU COPPER (II) ION HOH water 7RSA PDB ENTRY 7RSA PDB experimental model CU 125 2 CU CU 125 A CU 147 2 CU CU 147 A HOH 126 3 HOH HOH 126 A HOH 127 3 HOH HOH 127 A HOH 128 3 HOH HOH 128 A HOH 129 3 HOH HOH 129 A HOH 130 3 HOH HOH 130 A HOH 131 3 HOH HOH 131 A HOH 132 3 HOH HOH 132 A HOH 133 3 HOH HOH 133 A HOH 134 3 HOH HOH 134 A HOH 135 3 HOH HOH 135 A HOH 136 3 HOH HOH 136 A HOH 137 3 HOH HOH 137 A HOH 138 3 HOH HOH 138 A HOH 139 3 HOH HOH 139 A HOH 140 3 HOH HOH 140 A HOH 141 3 HOH HOH 141 A HOH 142 3 HOH HOH 142 A HOH 143 3 HOH HOH 143 A HOH 144 3 HOH HOH 144 A HOH 145 3 HOH HOH 145 A HOH 146 3 HOH HOH 146 A HOH 148 3 HOH HOH 148 A HOH 149 3 HOH HOH 149 A HOH 150 3 HOH HOH 150 A HOH 151 3 HOH HOH 151 A HOH 152 3 HOH HOH 152 A HOH 153 3 HOH HOH 153 A HOH 154 3 HOH HOH 154 A HOH 155 3 HOH HOH 155 A HOH 156 3 HOH HOH 156 A HOH 157 3 HOH HOH 157 A HOH 158 3 HOH HOH 158 A HOH 159 3 HOH HOH 159 A HOH 160 3 HOH HOH 160 A HOH 161 3 HOH HOH 161 A HOH 162 3 HOH HOH 162 A HOH 163 3 HOH HOH 163 A HOH 164 3 HOH HOH 164 A HOH 165 3 HOH HOH 165 A HOH 166 3 HOH HOH 166 A HOH 167 3 HOH HOH 167 A HOH 168 3 HOH HOH 168 A HOH 169 3 HOH HOH 169 A HOH 170 3 HOH HOH 170 A HOH 171 3 HOH HOH 171 A HOH 172 3 HOH HOH 172 A HOH 173 3 HOH HOH 173 A HOH 174 3 HOH HOH 174 A HOH 175 3 HOH HOH 175 A HOH 176 3 HOH HOH 176 A HOH 177 3 HOH HOH 177 A HOH 178 3 HOH HOH 178 A HOH 179 3 HOH HOH 179 A HOH 180 3 HOH HOH 180 A HOH 181 3 HOH HOH 181 A HOH 182 3 HOH HOH 182 A HOH 183 3 HOH HOH 183 A HOH 184 3 HOH HOH 184 A HOH 185 3 HOH HOH 185 A HOH 186 3 HOH HOH 186 A HOH 187 3 HOH HOH 187 A HOH 188 3 HOH HOH 188 A HOH 189 3 HOH HOH 189 A HOH 190 3 HOH HOH 190 A HOH 191 3 HOH HOH 191 A HOH 192 3 HOH HOH 192 A HOH 193 3 HOH HOH 193 A HOH 194 3 HOH HOH 194 A HOH 195 3 HOH HOH 195 A HOH 196 3 HOH HOH 196 A HOH 197 3 HOH HOH 197 A HOH 198 3 HOH HOH 198 A HOH 199 3 HOH HOH 199 A HOH 200 3 HOH HOH 200 A HOH 201 3 HOH HOH 201 A HOH 202 3 HOH HOH 202 A HOH 203 3 HOH HOH 203 A HOH 204 3 HOH HOH 204 A HOH 205 3 HOH HOH 205 A HOH 206 3 HOH HOH 206 A HOH 207 3 HOH HOH 207 A HOH 208 3 HOH HOH 208 A HOH 209 3 HOH HOH 209 A LYS 1 n 1 LYS 1 A GLU 2 n 2 GLU 2 A THR 3 n 3 THR 3 A ALA 4 n 4 ALA 4 A ALA 5 n 5 ALA 5 A ALA 6 n 6 ALA 6 A LYS 7 n 7 LYS 7 A PHE 8 n 8 PHE 8 A GLU 9 n 9 GLU 9 A ARG 10 n 10 ARG 10 A GLN 11 n 11 GLN 11 A HIS 12 n 12 HIS 12 A MET 13 n 13 MET 13 A ASP 14 n 14 ASP 14 A SER 15 n 15 SER 15 A SER 16 n 16 SER 16 A THR 17 n 17 THR 17 A SER 18 n 18 SER 18 A ALA 19 n 19 ALA 19 A ALA 20 n 20 ALA 20 A SER 21 n 21 SER 21 A SER 22 n 22 SER 22 A SER 23 n 23 SER 23 A ASN 24 n 24 ASN 24 A TYR 25 n 25 TYR 25 A CYS 26 n 26 CYS 26 A ASN 27 n 27 ASN 27 A GLN 28 n 28 GLN 28 A MET 29 n 29 MET 29 A MET 30 n 30 MET 30 A LYS 31 n 31 LYS 31 A SER 32 n 32 SER 32 A ARG 33 n 33 ARG 33 A ASN 34 n 34 ASN 34 A LEU 35 n 35 LEU 35 A THR 36 n 36 THR 36 A LYS 37 n 37 LYS 37 A ASP 38 n 38 ASP 38 A ARG 39 n 39 ARG 39 A CYS 40 n 40 CYS 40 A LYS 41 n 41 LYS 41 A PRO 42 n 42 PRO 42 A VAL 43 n 43 VAL 43 A ASN 44 n 44 ASN 44 A THR 45 n 45 THR 45 A PHE 46 n 46 PHE 46 A VAL 47 n 47 VAL 47 A HIS 48 n 48 HIS 48 A GLU 49 n 49 GLU 49 A SER 50 n 50 SER 50 A LEU 51 n 51 LEU 51 A ALA 52 n 52 ALA 52 A ASP 53 n 53 ASP 53 A VAL 54 n 54 VAL 54 A GLN 55 n 55 GLN 55 A ALA 56 n 56 ALA 56 A VAL 57 n 57 VAL 57 A CYS 58 n 58 CYS 58 A SER 59 n 59 SER 59 A GLN 60 n 60 GLN 60 A LYS 61 n 61 LYS 61 A ASN 62 n 62 ASN 62 A VAL 63 n 63 VAL 63 A ALA 64 n 64 ALA 64 A CYS 65 n 65 CYS 65 A LYS 66 n 66 LYS 66 A ASN 67 n 67 ASN 67 A GLY 68 n 68 GLY 68 A GLN 69 n 69 GLN 69 A THR 70 n 70 THR 70 A ASN 71 n 71 ASN 71 A CYS 72 n 72 CYS 72 A TYR 73 n 73 TYR 73 A GLN 74 n 74 GLN 74 A SER 75 n 75 SER 75 A TYR 76 n 76 TYR 76 A SER 77 n 77 SER 77 A THR 78 n 78 THR 78 A MET 79 n 79 MET 79 A SER 80 n 80 SER 80 A ILE 81 n 81 ILE 81 A THR 82 n 82 THR 82 A ASP 83 n 83 ASP 83 A CYS 84 n 84 CYS 84 A ARG 85 n 85 ARG 85 A GLU 86 n 86 GLU 86 A THR 87 n 87 THR 87 A GLY 88 n 88 GLY 88 A SER 89 n 89 SER 89 A SER 90 n 90 SER 90 A LYS 91 n 91 LYS 91 A TYR 92 n 92 TYR 92 A PRO 93 n 93 PRO 93 A ASN 94 n 94 ASN 94 A CYS 95 n 95 CYS 95 A ALA 96 n 96 ALA 96 A TYR 97 n 97 TYR 97 A LYS 98 n 98 LYS 98 A THR 99 n 99 THR 99 A THR 100 n 100 THR 100 A GLN 101 n 101 GLN 101 A ALA 102 n 102 ALA 102 A ASN 103 n 103 ASN 103 A LYS 104 n 104 LYS 104 A HIS 105 n 105 HIS 105 A ILE 106 n 106 ILE 106 A ILE 107 n 107 ILE 107 A VAL 108 n 108 VAL 108 A ALA 109 n 109 ALA 109 A CYS 110 n 110 CYS 110 A GLU 111 n 111 GLU 111 A GLY 112 n 112 GLY 112 A ASN 113 n 113 ASN 113 A PRO 114 n 114 PRO 114 A TYR 115 n 115 TYR 115 A VAL 116 n 116 VAL 116 A PRO 117 n 117 PRO 117 A VAL 118 n 118 VAL 118 A HIS 119 n 119 HIS 119 A PHE 120 n 120 PHE 120 A ASP 121 n 121 ASP 121 A ALA 122 n 122 ALA 122 A SER 123 n 123 SER 123 A VAL 124 n 124 VAL 124 A author_defined_assembly 1 monomeric A LYS 1 A N LYS 1 4_546 A CU 125 B CU CU 1_555 A GLU 2 A O GLU 2 4_546 161.6 A LYS 1 A N LYS 1 4_546 A CU 125 B CU CU 1_555 A GLU 2 A N GLU 2 4_546 79.3 A GLU 2 A O GLU 2 4_546 A CU 125 B CU CU 1_555 A GLU 2 A N GLU 2 4_546 82.3 A LYS 1 A N LYS 1 4_546 A CU 125 B CU CU 1_555 A TYR 76 A O TYR 76 1_555 81.7 A GLU 2 A O GLU 2 4_546 A CU 125 B CU CU 1_555 A TYR 76 A O TYR 76 1_555 100.1 A GLU 2 A N GLU 2 4_546 A CU 125 B CU CU 1_555 A TYR 76 A O TYR 76 1_555 98.4 A LYS 1 A N LYS 1 4_546 A CU 125 B CU CU 1_555 A HIS 105 A NE2 HIS 105 1_555 104.8 A GLU 2 A O GLU 2 4_546 A CU 125 B CU CU 1_555 A HIS 105 A NE2 HIS 105 1_555 93.4 A GLU 2 A N GLU 2 4_546 A CU 125 B CU CU 1_555 A HIS 105 A NE2 HIS 105 1_555 169.1 A TYR 76 A O TYR 76 1_555 A CU 125 B CU CU 1_555 A HIS 105 A NE2 HIS 105 1_555 92.2 A GLU 111 A OE2 GLU 111 1_555 A CU 147 C CU CU 1_555 A HIS 119 A NE2 HIS 119 1_555 97.6 A GLU 111 A OE2 GLU 111 1_555 A CU 147 C CU CU 1_555 A HOH 128 D O HOH 1_555 78.8 A HIS 119 A NE2 HIS 119 1_555 A CU 147 C CU CU 1_555 A HOH 128 D O HOH 1_555 162.4 A GLU 111 A OE2 GLU 111 1_555 A CU 147 C CU CU 1_555 A HOH 146 D O HOH 1_555 93.7 A HIS 119 A NE2 HIS 119 1_555 A CU 147 C CU CU 1_555 A HOH 146 D O HOH 1_555 85.0 A HOH 128 D O HOH 1_555 A CU 147 C CU CU 1_555 A HOH 146 D O HOH 1_555 112.4 A GLU 111 A OE2 GLU 111 1_555 A CU 147 C CU CU 1_555 A HOH 180 D O HOH 1_555 100.7 A HIS 119 A NE2 HIS 119 1_555 A CU 147 C CU CU 1_555 A HOH 180 D O HOH 1_555 87.7 A HOH 128 D O HOH 1_555 A CU 147 C CU CU 1_555 A HOH 180 D O HOH 1_555 76.2 A HOH 146 D O HOH 1_555 A CU 147 C CU CU 1_555 A HOH 180 D O HOH 1_555 164.6 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O PRO 42 A O PRO 42 A N GLU 86 A N GLU 86 A N MET 79 A N MET 79 A O LYS 104 A O LYS 104 A N LYS 91 A N LYS 91 A O ASN 94 A O ASN 94 A N VAL 63 A N VAL 63 A O CYS 72 A O CYS 72 A N TYR 73 A N TYR 73 A O VAL 108 A O VAL 108 A N GLU 111 A N GLU 111 A O VAL 116 A O VAL 116 A N VAL 63 A N VAL 63 A O CYS 72 A O CYS 72 A N TYR 73 A N TYR 73 A O VAL 108 A O VAL 108 A O HIS 105 A O HIS 105 A N VAL 124 A N VAL 124 1 A A HE2 CU HIS CU 105 125 1.08 1 A A HE2 CU HIS CU 119 147 1.16 1 A A H2 H2 HOH HOH 175 189 1.16 1_555 4_546 1 A A H H2 SER HOH 77 177 1.22 1_555 4_546 1 A A H CU GLU CU 2 125 1.41 1_555 4_556 1 A HIS 48 -97.83 56.58 1 A GLN 60 -105.35 -128.92 18.5 0.2 0.2 2.0 8.0 6610 85. 100000. 0.001 1 2. MOLECULAR REPLACEMENT PDB ENTRY 7RSA 0.30 4.0 2.0 8.0 82 1280 2 0 1196 0.01 1.4 26.0 1.1 2.0 50.0 1AQP 6930 2. 0.038 0.041 1 13. 2.5 85. 0.08 2.00 2.11 9. 0.08 1.5 55. data reduction DENZO data scaling SCALEPACK model building X-PLOR 3.8 refinement X-PLOR 3.8 phasing X-PLOR 3.8 RIBONUCLEASE A COPPER COMPLEX 1 N N 2 N N 2 N N 3 N N A THR 3 A THR 3 HELX_P A MET 13 A MET 13 1 H1 11 A ASN 24 A ASN 24 HELX_P A ASN 34 A ASN 34 1 H2 11 A SER 50 A SER 50 HELX_P A GLN 60 A GLN 60 1 H3 11 disulf 2.305 A CYS 26 A SG CYS 26 1_555 A CYS 84 A SG CYS 84 1_555 disulf 2.217 A CYS 40 A SG CYS 40 1_555 A CYS 95 A SG CYS 95 1_555 disulf 2.259 A CYS 58 A SG CYS 58 1_555 A CYS 110 A SG CYS 110 1_555 disulf 2.362 A CYS 65 A SG CYS 65 1_555 A CYS 72 A SG CYS 72 1_555 metalc 2.346 A LYS 1 A N LYS 1 4_546 A CU 125 B CU CU 1_555 metalc 1.993 A GLU 2 A O GLU 2 4_546 A CU 125 B CU CU 1_555 metalc 2.048 A GLU 2 A N GLU 2 4_546 A CU 125 B CU CU 1_555 metalc 2.321 A TYR 76 A O TYR 76 1_555 A CU 125 B CU CU 1_555 metalc 2.016 A HIS 105 A NE2 HIS 105 1_555 A CU 125 B CU CU 1_555 metalc 2.123 A GLU 111 A OE2 GLU 111 1_555 A CU 147 C CU CU 1_555 metalc 2.114 A HIS 119 A NE2 HIS 119 1_555 A CU 147 C CU CU 1_555 metalc 2.612 A HOH 128 D O HOH 1_555 A CU 147 C CU CU 1_555 metalc 2.363 A HOH 146 D O HOH 1_555 A CU 147 C CU CU 1_555 metalc 2.134 A CU 147 C CU CU 1_555 A HOH 180 D O HOH 1_555 HYDROLASE (PHOSPHORIC DIESTER) HYDROLASE (PHOSPHORIC DIESTER) A TYR 92 A TYR 92 1 A PRO 93 A PRO 93 0.77 A ASN 113 A ASN 113 1 A PRO 114 A PRO 114 0.23 RNAS1_BOVIN UNP 1 1 P61823 MALKSLVLLSLLVLVLLLVRVQPSLGKETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADV QAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV 27 150 1AQP 1 124 P61823 A 1 1 124 3 3 4 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LYS 41 A LYS 41 A HIS 48 A HIS 48 A MET 79 A MET 79 A THR 87 A THR 87 A ASN 94 A ASN 94 A LYS 104 A LYS 104 A LYS 41 A LYS 41 A HIS 48 A HIS 48 A SER 90 A SER 90 A LYS 91 A LYS 91 A ASN 94 A ASN 94 A LYS 104 A LYS 104 A LYS 61 A LYS 61 A ALA 64 A ALA 64 A ASN 71 A ASN 71 A SER 75 A SER 75 A HIS 105 A HIS 105 A ASN 113 A ASN 113 A PRO 114 A PRO 114 A HIS 119 A HIS 119 A LYS 61 A LYS 61 A ALA 64 A ALA 64 A ASN 71 A ASN 71 A SER 75 A SER 75 A HIS 105 A HIS 105 A ASN 113 A ASN 113 A ASP 121 A ASP 121 A VAL 124 A VAL 124 COPPER BINDING SITE I. Unknown 4 COPPER BINDING SITE II. Unknown 2 BINDING SITE FOR RESIDUE CU A 125 A CU 125 Software 4 BINDING SITE FOR RESIDUE CU A 147 A CU 147 Software 5 A HIS 105 A HIS 105 4 1_555 A TYR 76 A TYR 76 4 1_555 A LYS 1 A LYS 1 4 1_555 A GLU 2 A GLU 2 4 1_555 A HIS 119 A HIS 119 2 1_555 A GLU 111 A GLU 111 2 1_555 A LYS 1 A LYS 1 4 4_546 A GLU 2 A GLU 2 4 4_546 A TYR 76 A TYR 76 4 1_555 A HIS 105 A HIS 105 4 1_555 A GLU 111 A GLU 111 5 1_555 A HIS 119 A HIS 119 5 1_555 A HOH 128 D HOH 5 1_555 A HOH 146 D HOH 5 1_555 A HOH 180 D HOH 5 1_555 5 C 1 2 1