0.012514 0.007225 0.000000 0.000000 0.014450 0.000000 0.000000 0.000000 0.014235 0.00000 0.00000 0.00000 Klumpp, M. Baumeister, W. Essen, L.-O. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 79.910 79.910 70.250 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking O4 P -3 94.971 PHOSPHATE ION non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Cell(Cambridge,Mass.) CELLB5 0998 0092-8674 91 263 270 10.1016/S0092-8674(00)80408-0 9346243 Structure of the substrate binding domain of the thermosome, an archaeal group II chaperonin. 1997 10.2210/pdb1asx/pdb pdb_00001asx 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 IMAGE PLATE 1997-03 MARRESEARCH GRAPHITE(002) M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RUH2R 17822.625 THERMOSOME ALPHA SUBUNIT, APICAL DOMAIN, SUBSTRATE-BINDING DOMAIN 1 man polymer 94.971 PHOSPHATE ION 1 syn non-polymer 18.015 water 6 nat water no no MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQK GIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNHHHHHH MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQK GIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNHHHHHH A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Thermoplasma Escherichia Escherichia coli sample 25905 BL21 CYTOPLASM THSA 2303 Thermoplasma acidophilum THSA 469008 Escherichia coli BL21(DE3) BL21 (DE3) PLASMID PRSET6A 1 3.63 70. 3.5 pH 3.5 database_2 pdbx_initial_refinement_model struct_site repository Initial release Version format compliance Derived calculations Version format compliance Database references Derived calculations Refinement description 1 0 1997-12-03 1 1 2008-03-24 1 2 2011-07-13 1 3 2023-08-02 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 1ASX CRYSTAL FORM EXHIBITS SEGMENTAL MOVEMENT OF A REGION, CALLED HELICAL PROTRUSION, IN COMPARISON TO PDB ENTRY 1ASS Y BNL 1997-08-11 REL REL PO4 PHOSPHATE ION HOH water 1ASS GLOBULAR DOMAIN PORTION OF CRYSTAL FORM A (PDB ENTRY 1ASS) PDB experimental model PO4 7 2 PO4 PO4 160 A HOH 1 3 HOH HOH 161 A HOH 2 3 HOH HOH 162 A HOH 3 3 HOH HOH 163 A HOH 4 3 HOH HOH 164 A HOH 5 3 HOH HOH 165 A HOH 6 3 HOH HOH 166 A MET 1 n 1 MET 1 A SER 2 n 2 SER 2 A GLY 3 n 3 GLY 3 A ILE 4 n 4 ILE 4 A VAL 5 n 5 VAL 5 A ILE 6 n 6 ILE 6 A ASP 7 n 7 ASP 7 A LYS 8 n 8 LYS 8 A GLU 9 n 9 GLU 9 A LYS 10 n 10 LYS 10 A VAL 11 n 11 VAL 11 A HIS 12 n 12 HIS 12 A SER 13 n 13 SER 13 A LYS 14 n 14 LYS 14 A MET 15 n 15 MET 15 A PRO 16 n 16 PRO 16 A ASP 17 n 17 ASP 17 A VAL 18 n 18 VAL 18 A VAL 19 n 19 VAL 19 A LYS 20 n 20 LYS 20 A ASN 21 n 21 ASN 21 A ALA 22 n 22 ALA 22 A LYS 23 n 23 LYS 23 A ILE 24 n 24 ILE 24 A ALA 25 n 25 ALA 25 A LEU 26 n 26 LEU 26 A ILE 27 n 27 ILE 27 A ASP 28 n 28 ASP 28 A SER 29 n 29 SER 29 A ALA 30 n 30 ALA 30 A LEU 31 n 31 LEU 31 A GLU 32 n 32 GLU 32 A ILE 33 n 33 ILE 33 A LYS 34 n 34 LYS 34 A LYS 35 n 35 LYS 35 A THR 36 n 36 THR 36 A GLU 37 n 37 GLU 37 A ILE 38 n 38 ILE 38 A GLU 39 n 39 GLU 39 A ALA 40 n 40 ALA 40 A LYS 41 n 41 LYS 41 A VAL 42 n 42 VAL 42 A GLN 43 n 43 GLN 43 A ILE 44 n 44 ILE 44 A SER 45 n 45 SER 45 A ASP 46 n 46 ASP 46 A PRO 47 n 47 PRO 47 A SER 48 n 48 SER 48 A LYS 49 n 49 LYS 49 A ILE 50 n 50 ILE 50 A GLN 51 n 51 GLN 51 A ASP 52 n 52 ASP 52 A PHE 53 n 53 PHE 53 A LEU 54 n 54 LEU 54 A ASN 55 n 55 ASN 55 A GLN 56 n 56 GLN 56 A GLU 57 n 57 GLU 57 A THR 58 n 58 THR 58 A ASN 59 n 59 ASN 59 A THR 60 n 60 THR 60 A PHE 61 n 61 PHE 61 A LYS 62 n 62 LYS 62 A GLN 63 n 63 GLN 63 A MET 64 n 64 MET 64 A VAL 65 n 65 VAL 65 A GLU 66 n 66 GLU 66 A LYS 67 n 67 LYS 67 A ILE 68 n 68 ILE 68 A LYS 69 n 69 LYS 69 A LYS 70 n 70 LYS 70 A SER 71 n 71 SER 71 A GLY 72 n 72 GLY 72 A ALA 73 n 73 ALA 73 A ASN 74 n 74 ASN 74 A VAL 75 n 75 VAL 75 A VAL 76 n 76 VAL 76 A LEU 77 n 77 LEU 77 A CYS 78 n 78 CYS 78 A GLN 79 n 79 GLN 79 A LYS 80 n 80 LYS 80 A GLY 81 n 81 GLY 81 A ILE 82 n 82 ILE 82 A ASP 83 n 83 ASP 83 A ASP 84 n 84 ASP 84 A VAL 85 n 85 VAL 85 A ALA 86 n 86 ALA 86 A GLN 87 n 87 GLN 87 A HIS 88 n 88 HIS 88 A TYR 89 n 89 TYR 89 A LEU 90 n 90 LEU 90 A ALA 91 n 91 ALA 91 A LYS 92 n 92 LYS 92 A GLU 93 n 93 GLU 93 A GLY 94 n 94 GLY 94 A ILE 95 n 95 ILE 95 A TYR 96 n 96 TYR 96 A ALA 97 n 97 ALA 97 A VAL 98 n 98 VAL 98 A ARG 99 n 99 ARG 99 A ARG 100 n 100 ARG 100 A VAL 101 n 101 VAL 101 A LYS 102 n 102 LYS 102 A LYS 103 n 103 LYS 103 A SER 104 n 104 SER 104 A ASP 105 n 105 ASP 105 A MET 106 n 106 MET 106 A GLU 107 n 107 GLU 107 A LYS 108 n 108 LYS 108 A LEU 109 n 109 LEU 109 A ALA 110 n 110 ALA 110 A LYS 111 n 111 LYS 111 A ALA 112 n 112 ALA 112 A THR 113 n 113 THR 113 A GLY 114 n 114 GLY 114 A ALA 115 n 115 ALA 115 A LYS 116 n 116 LYS 116 A ILE 117 n 117 ILE 117 A VAL 118 n 118 VAL 118 A THR 119 n 119 THR 119 A ASP 120 n 120 ASP 120 A LEU 121 n 121 LEU 121 A ASP 122 n 122 ASP 122 A ASP 123 n 123 ASP 123 A LEU 124 n 124 LEU 124 A THR 125 n 125 THR 125 A PRO 126 n 126 PRO 126 A SER 127 n 127 SER 127 A VAL 128 n 128 VAL 128 A LEU 129 n 129 LEU 129 A GLY 130 n 130 GLY 130 A GLU 131 n 131 GLU 131 A ALA 132 n 132 ALA 132 A GLU 133 n 133 GLU 133 A THR 134 n 134 THR 134 A VAL 135 n 135 VAL 135 A GLU 136 n 136 GLU 136 A GLU 137 n 137 GLU 137 A ARG 138 n 138 ARG 138 A LYS 139 n 139 LYS 139 A ILE 140 n 140 ILE 140 A GLY 141 n 141 GLY 141 A ASP 142 n 142 ASP 142 A ASP 143 n 143 ASP 143 A ARG 144 n 144 ARG 144 A MET 145 n 145 MET 145 A THR 146 n 146 THR 146 A PHE 147 n 147 PHE 147 A VAL 148 n 148 VAL 148 A MET 149 n 149 MET 149 A GLY 150 n 150 GLY 150 A CYS 151 n 151 CYS 151 A LYS 152 n 152 LYS 152 A n 153 153 A n 154 154 A n 155 155 A n 156 156 A n 157 157 A n 158 158 A n 159 159 A author_and_software_defined_assembly PISA,PQS 2 dimeric 2610 -27 15140 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_556 y,x,-z+1 crystal symmetry operation 0.0000000000 0.0000000000 70.2500000000 A O ILE 4 A O ILE 4 A N VAL 148 A N VAL 148 A O ASP 143 A O ASP 143 A N ILE 140 A N ILE 140 A O VAL 135 A O VAL 135 A N VAL 19 A N VAL 19 A O GLY 130 A O GLY 130 A N ILE 24 A N ILE 24 A O ALA 25 A O ALA 25 A N VAL 75 A N VAL 75 A O VAL 76 A O VAL 76 A N TYR 96 A N TYR 96 1 A CD LYS 34 A CD LYS 34 0 Y 1 A CE LYS 34 A CE LYS 34 0 Y 1 A NZ LYS 34 A NZ LYS 34 0 Y 1 A CD GLN 56 A CD GLN 56 0 Y 1 A OE1 GLN 56 A OE1 GLN 56 0 Y 1 A NE2 GLN 56 A NE2 GLN 56 0 Y 1 A CD LYS 69 A CD LYS 69 0 Y 1 A CE LYS 69 A CE LYS 69 0 Y 1 A NZ LYS 69 A NZ LYS 69 0 Y 1 A CG LYS 70 A CG LYS 70 0 Y 1 A CD LYS 70 A CD LYS 70 0 Y 1 A CE LYS 70 A CE LYS 70 0 Y 1 A NZ LYS 70 A NZ LYS 70 0 Y 1 A CD LYS 103 A CD LYS 103 0 Y 1 A CE LYS 103 A CE LYS 103 0 Y 1 A NZ LYS 103 A NZ LYS 103 0 Y 1 A CD LYS 116 A CD LYS 116 0 Y 1 A CE LYS 116 A CE LYS 116 0 Y 1 A NZ LYS 116 A NZ LYS 116 0 Y 1 A CD LYS 139 A CD LYS 139 0 Y 1 A CE LYS 139 A CE LYS 139 0 Y 1 A NZ LYS 139 A NZ LYS 139 0 Y 1 A ASN 153 A ASN 153 1 Y 1 A HIS 154 A HIS 154 1 Y 1 A HIS 155 A HIS 155 1 Y 1 A HIS 156 A HIS 156 1 Y 1 A HIS 157 A HIS 157 1 Y 1 A HIS 158 A HIS 158 1 Y 1 A HIS 159 A HIS 159 1 Y 1 17.39 2.50 113.10 130.49 A A A N CA C GLY GLY GLY 3 3 3 N 1 A ASP 7 -71.69 26.10 1 A SER 13 -56.95 -90.05 1 A LYS 14 -65.96 27.25 1 A ASN 21 62.54 62.43 1 A LEU 31 -97.76 52.66 1 A LYS 80 -106.19 -166.91 1 A CYS 151 -59.82 106.27 PARHCSDX.PRO TOPHCSDX.PRO 36.0 20.55 14.18 0.0 20.55 0.0 34.00 0.2720000 0.2220000 0.2220000 2.8 10. 390 6205 6.3 94.8 CONCENTRIC SHELLS 1000000. 0.001 1 RESTRAINED RFREE 0.0 MOLECULAR REPLACEMENT GLOBULAR DOMAIN PORTION OF CRYSTAL FORM A (PDB ENTRY 1ASS) 0.44 0.35 5.0 0.41 0.39 2.8 10. 6 1186 5 0 1175 0.011 1.575 23.93 1.351 2.90 71.8 39.9 2.8 19. 1ASX 6335 -3. 0.0640000 1 20.6 2.7 94.8 0.1450000 2.8 6.9 1 71.8 phasing SOLOMON model building X-PLOR 3.851 refinement X-PLOR 3.851 data reduction DENZO data scaling SCALEPACK phasing X-PLOR 3.851 APICAL DOMAIN OF THE CHAPERONIN FROM THERMOPLASMA ACIDOPHILUM 1 N N 2 N N 3 N N A LYS 35 A LYS 35 HELX_P A GLN 43 A GLN 43 1 1 9 A PRO 47 A PRO 47 HELX_P A LYS 67 A LYS 67 5 2 21 A LYS 69 A LYS 69 HELX_P A SER 71 A SER 71 5 3 3 A ASP 84 A ASP 84 HELX_P A LYS 92 A LYS 92 1 4 9 A LYS 103 A LYS 103 HELX_P A THR 113 A THR 113 1 5 11 A LEU 121 A LEU 121 HELX_P A ASP 123 A ASP 123 5 6 3 A PRO 126 A PRO 126 HELX_P A VAL 128 A VAL 128 5 7 3 CHAPERONIN CHAPERONIN, HSP60, THERMOSOME, TCP1, GROEL, THERMOPLASMA ACIDOPHILUM, ATP-BINDING THSA_THEAC UNP 1 1 P48424 MMTGQVPILVLKEGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKM IVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEKSTDDATLRKIALTALS GKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALID SALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEK LAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKE DGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKAEHEKGRISVGVDLDN NGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKKSTPPSGQGGQGQGMPGGGMPEY 214 365 1ASX 2 153 P48424 A 1 2 153 4 4 anti-parallel anti-parallel anti-parallel anti-parallel parallel parallel A ILE 4 A ILE 4 A ILE 6 A ILE 6 A ASP 143 A ASP 143 A MET 149 A MET 149 A THR 134 A THR 134 A ILE 140 A ILE 140 A VAL 18 A VAL 18 A LYS 20 A LYS 20 A GLY 130 A GLY 130 A ALA 132 A ALA 132 A ALA 22 A ALA 22 A ILE 27 A ILE 27 A VAL 75 A VAL 75 A CYS 78 A CYS 78 A TYR 96 A TYR 96 A VAL 98 A VAL 98 BINDING SITE FOR RESIDUE PO4 A 160 A PO4 160 Software 7 A GLU 32 A GLU 32 7 1_555 A ILE 33 A ILE 33 7 1_555 A PRO 47 A PRO 47 7 4_556 A SER 48 A SER 48 7 4_556 A ILE 50 A ILE 50 7 4_556 A GLN 51 A GLN 51 7 4_556 A ASP 83 A ASP 83 7 1_555 152 P 31 2 1