0.009756 0.000000 0.000000 0.000000 0.009756 0.000000 0.000000 0.000000 0.005942 0.00000 0.00000 0.00000 Erskine, P.T. Cooper, J.B. Wood, S.P. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.00 90.00 90.00 102.500 102.500 168.300 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer US Nat.Struct.Biol. NSBIEW 2024 1072-8368 4 1025 1031 10.1038/nsb1297-1025 9406553 X-ray structure of 5-aminolaevulinate dehydratase, a hybrid aldolase. 1997 10.2210/pdb1aw5/pdb pdb_00001aw5 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 IMAGE PLATE 1996-09 MARRESEARCH M x-ray 1 0.97913 1.0 BM14 ESRF 0.97913 SYNCHROTRON ESRF BEAMLINE BM14 37620.199 5-AMINOLEVULINATE DEHYDRATASE 4.2.1.24 M272V 1 man polymer 65.409 ZINC ION 2 syn non-polymer 18.015 water 307 nat water PORPHOBILINOGEN SYNTHASE no yes (MSE)HTAEFLETEPTEISSVLAGGYNHPLLRQWQSERQLTKN(MSE)LIFPLFISDNPDDFTEIDSAPNINRIGVNRLK DYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIRFIREKFPELYIICDVCLCEYTSHGHCGVLYDDGTI NRERSVSRLAAVAVNYAKAGAHCVAPSD(MSE)IDGRIRDIKRGLINANLAHKTFVLSYAAKFSGNLYGPARDAACSAPS NGDRKCYQLPPAGRGLARRALERD(MSE)SEGADGIIVKPSTFYLDIVRDASEICKDLPICAYHVSGEYA(MSE)LHAAA EKGVVDLKTIAFESHQGFLRAGARLIITYLAPEFLDWLDE MHTAEFLETEPTEISSVLAGGYNHPLLRQWQSERQLTKNMLIFPLFISDNPDDFTEIDSAPNINRIGVNRLKDYLKPLVA KGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIRFIREKFPELYIICDVCLCEYTSHGHCGVLYDDGTINRERSVSR LAAVAVNYAKAGAHCVAPSDMIDGRIRDIKRGLINANLAHKTFVLSYAAKFSGNLYGPARDAACSAPSNGDRKCYQLPPA GRGLARRALERDMSEGADGIIVKPSTFYLDIVRDASEICKDLPICAYHVSGEYAMLHAAAEKGVVDLKTIAFESHQGFLR AGARLIITYLAPEFLDWLDE A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n baker's yeast Saccharomyces Escherichia sample B834 CYTOSOL HEM2 4932 Saccharomyces cerevisiae 562 Escherichia coli B834 (DE3) PLYSS PUC18 2 2.94 59.0 VAPOR DIFFUSION, HANGING DROP 8.0 ENZYME CONCENTRATION 1 MG/ML, PH 7.0 - 8.5, BUFFER 0.2 M TRIS-HCL, PRECIPITANT PEG 6000 (<10%), 70 MICROMOLAR ZINC SULPHATE, 6 MM BETA-MERCAPTOETHANOL, HANGING DROPS., pH 8.0, vapor diffusion - hanging drop 7.0-8.5 refine software atom_site database_2 struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Derived calculations Version format compliance Refinement description Atomic model Database references Derived calculations 1 0 1998-10-21 1 1 2008-03-24 1 2 2011-07-13 1 3 2017-09-13 2 0 2021-11-03 _refine.pdbx_ls_cross_valid_method _refine.pdbx_method_to_determine_struct _software.name _atom_site.occupancy _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1997-10-09 REL REL ZN ZINC ION HOH water ZN 400 2 ZN ZN 400 A ZN 401 2 ZN ZN 401 A HOH 500 3 HOH HOH 500 A HOH 501 3 HOH HOH 501 A HOH 502 3 HOH HOH 502 A HOH 503 3 HOH HOH 503 A HOH 504 3 HOH HOH 504 A HOH 505 3 HOH HOH 505 A HOH 506 3 HOH HOH 506 A HOH 507 3 HOH HOH 507 A HOH 508 3 HOH HOH 508 A HOH 509 3 HOH HOH 509 A HOH 510 3 HOH HOH 510 A HOH 511 3 HOH HOH 511 A HOH 512 3 HOH HOH 512 A HOH 513 3 HOH HOH 513 A HOH 514 3 HOH HOH 514 A HOH 515 3 HOH HOH 515 A HOH 516 3 HOH HOH 516 A HOH 517 3 HOH HOH 517 A HOH 518 3 HOH HOH 518 A HOH 519 3 HOH HOH 519 A HOH 520 3 HOH HOH 520 A HOH 521 3 HOH HOH 521 A HOH 522 3 HOH HOH 522 A HOH 523 3 HOH HOH 523 A HOH 524 3 HOH HOH 524 A HOH 525 3 HOH HOH 525 A HOH 526 3 HOH HOH 526 A HOH 527 3 HOH HOH 527 A HOH 528 3 HOH HOH 528 A HOH 529 3 HOH HOH 529 A HOH 530 3 HOH HOH 530 A HOH 531 3 HOH HOH 531 A HOH 532 3 HOH HOH 532 A HOH 533 3 HOH HOH 533 A HOH 534 3 HOH HOH 534 A HOH 535 3 HOH HOH 535 A HOH 536 3 HOH HOH 536 A HOH 537 3 HOH HOH 537 A HOH 538 3 HOH HOH 538 A HOH 539 3 HOH HOH 539 A HOH 540 3 HOH HOH 540 A HOH 541 3 HOH HOH 541 A HOH 542 3 HOH HOH 542 A HOH 543 3 HOH HOH 543 A HOH 544 3 HOH HOH 544 A HOH 545 3 HOH HOH 545 A HOH 546 3 HOH HOH 546 A HOH 547 3 HOH HOH 547 A HOH 548 3 HOH HOH 548 A HOH 549 3 HOH HOH 549 A HOH 550 3 HOH HOH 550 A HOH 551 3 HOH HOH 551 A HOH 552 3 HOH HOH 552 A HOH 553 3 HOH HOH 553 A HOH 554 3 HOH HOH 554 A HOH 555 3 HOH HOH 555 A HOH 556 3 HOH HOH 556 A HOH 557 3 HOH HOH 557 A HOH 558 3 HOH HOH 558 A HOH 559 3 HOH HOH 559 A HOH 560 3 HOH HOH 560 A HOH 561 3 HOH HOH 561 A HOH 562 3 HOH HOH 562 A HOH 563 3 HOH HOH 563 A HOH 564 3 HOH HOH 564 A HOH 565 3 HOH HOH 565 A HOH 566 3 HOH HOH 566 A HOH 567 3 HOH HOH 567 A HOH 568 3 HOH HOH 568 A HOH 569 3 HOH HOH 569 A HOH 570 3 HOH HOH 570 A HOH 571 3 HOH HOH 571 A HOH 572 3 HOH HOH 572 A HOH 573 3 HOH HOH 573 A HOH 574 3 HOH HOH 574 A HOH 575 3 HOH HOH 575 A HOH 576 3 HOH HOH 576 A HOH 577 3 HOH HOH 577 A HOH 578 3 HOH HOH 578 A HOH 579 3 HOH HOH 579 A HOH 580 3 HOH HOH 580 A HOH 581 3 HOH HOH 581 A HOH 582 3 HOH HOH 582 A HOH 583 3 HOH HOH 583 A HOH 584 3 HOH HOH 584 A HOH 585 3 HOH HOH 585 A HOH 586 3 HOH HOH 586 A HOH 587 3 HOH HOH 587 A HOH 588 3 HOH HOH 588 A HOH 589 3 HOH HOH 589 A HOH 590 3 HOH HOH 590 A HOH 591 3 HOH HOH 591 A HOH 592 3 HOH HOH 592 A HOH 593 3 HOH HOH 593 A HOH 594 3 HOH HOH 594 A HOH 595 3 HOH HOH 595 A HOH 596 3 HOH HOH 596 A HOH 597 3 HOH HOH 597 A HOH 598 3 HOH HOH 598 A HOH 599 3 HOH HOH 599 A HOH 600 3 HOH HOH 600 A HOH 601 3 HOH HOH 601 A HOH 602 3 HOH HOH 602 A HOH 603 3 HOH HOH 603 A HOH 604 3 HOH HOH 604 A HOH 605 3 HOH HOH 605 A HOH 606 3 HOH HOH 606 A HOH 607 3 HOH HOH 607 A HOH 608 3 HOH HOH 608 A HOH 609 3 HOH HOH 609 A HOH 610 3 HOH HOH 610 A HOH 611 3 HOH HOH 611 A HOH 612 3 HOH HOH 612 A HOH 613 3 HOH HOH 613 A HOH 614 3 HOH HOH 614 A HOH 615 3 HOH HOH 615 A HOH 616 3 HOH HOH 616 A HOH 617 3 HOH HOH 617 A HOH 618 3 HOH HOH 618 A HOH 619 3 HOH HOH 619 A HOH 620 3 HOH HOH 620 A HOH 621 3 HOH HOH 621 A HOH 622 3 HOH HOH 622 A HOH 623 3 HOH HOH 623 A HOH 624 3 HOH HOH 624 A HOH 625 3 HOH HOH 625 A HOH 626 3 HOH HOH 626 A HOH 627 3 HOH HOH 627 A HOH 628 3 HOH HOH 628 A HOH 629 3 HOH HOH 629 A HOH 630 3 HOH HOH 630 A HOH 631 3 HOH HOH 631 A HOH 632 3 HOH HOH 632 A HOH 633 3 HOH HOH 633 A HOH 634 3 HOH HOH 634 A HOH 635 3 HOH HOH 635 A HOH 636 3 HOH HOH 636 A HOH 637 3 HOH HOH 637 A HOH 638 3 HOH HOH 638 A HOH 639 3 HOH HOH 639 A HOH 640 3 HOH HOH 640 A HOH 641 3 HOH HOH 641 A HOH 642 3 HOH HOH 642 A HOH 643 3 HOH HOH 643 A HOH 644 3 HOH HOH 644 A HOH 645 3 HOH HOH 645 A HOH 646 3 HOH HOH 646 A HOH 647 3 HOH HOH 647 A HOH 648 3 HOH HOH 648 A HOH 649 3 HOH HOH 649 A HOH 650 3 HOH HOH 650 A HOH 651 3 HOH HOH 651 A HOH 652 3 HOH HOH 652 A HOH 653 3 HOH HOH 653 A HOH 654 3 HOH HOH 654 A HOH 655 3 HOH HOH 655 A HOH 656 3 HOH HOH 656 A HOH 657 3 HOH HOH 657 A HOH 658 3 HOH HOH 658 A HOH 659 3 HOH HOH 659 A HOH 660 3 HOH HOH 660 A HOH 661 3 HOH HOH 661 A HOH 662 3 HOH HOH 662 A HOH 663 3 HOH HOH 663 A HOH 664 3 HOH HOH 664 A HOH 665 3 HOH HOH 665 A HOH 666 3 HOH HOH 666 A HOH 667 3 HOH HOH 667 A HOH 668 3 HOH HOH 668 A HOH 669 3 HOH HOH 669 A HOH 670 3 HOH HOH 670 A HOH 671 3 HOH HOH 671 A HOH 672 3 HOH HOH 672 A HOH 673 3 HOH HOH 673 A HOH 674 3 HOH HOH 674 A HOH 675 3 HOH HOH 675 A HOH 676 3 HOH HOH 676 A HOH 677 3 HOH HOH 677 A HOH 678 3 HOH HOH 678 A HOH 679 3 HOH HOH 679 A HOH 680 3 HOH HOH 680 A HOH 681 3 HOH HOH 681 A HOH 682 3 HOH HOH 682 A HOH 683 3 HOH HOH 683 A HOH 684 3 HOH HOH 684 A HOH 685 3 HOH HOH 685 A HOH 686 3 HOH HOH 686 A HOH 687 3 HOH HOH 687 A HOH 688 3 HOH HOH 688 A HOH 689 3 HOH HOH 689 A HOH 690 3 HOH HOH 690 A HOH 691 3 HOH HOH 691 A HOH 692 3 HOH HOH 692 A HOH 693 3 HOH HOH 693 A HOH 694 3 HOH HOH 694 A HOH 695 3 HOH HOH 695 A HOH 696 3 HOH HOH 696 A HOH 697 3 HOH HOH 697 A HOH 698 3 HOH HOH 698 A HOH 699 3 HOH HOH 699 A HOH 700 3 HOH HOH 700 A HOH 701 3 HOH HOH 701 A HOH 702 3 HOH HOH 702 A HOH 703 3 HOH HOH 703 A HOH 704 3 HOH HOH 704 A HOH 705 3 HOH HOH 705 A HOH 706 3 HOH HOH 706 A HOH 707 3 HOH HOH 707 A HOH 708 3 HOH HOH 708 A HOH 709 3 HOH HOH 709 A HOH 710 3 HOH HOH 710 A HOH 711 3 HOH HOH 711 A HOH 712 3 HOH HOH 712 A HOH 713 3 HOH HOH 713 A HOH 714 3 HOH HOH 714 A HOH 715 3 HOH HOH 715 A HOH 716 3 HOH HOH 716 A HOH 717 3 HOH HOH 717 A HOH 718 3 HOH HOH 718 A HOH 719 3 HOH HOH 719 A HOH 720 3 HOH HOH 720 A HOH 721 3 HOH HOH 721 A HOH 722 3 HOH HOH 722 A HOH 723 3 HOH HOH 723 A HOH 724 3 HOH HOH 724 A HOH 725 3 HOH HOH 725 A HOH 726 3 HOH HOH 726 A HOH 727 3 HOH HOH 727 A HOH 728 3 HOH HOH 728 A HOH 729 3 HOH HOH 729 A HOH 730 3 HOH HOH 730 A HOH 731 3 HOH HOH 731 A HOH 732 3 HOH HOH 732 A HOH 733 3 HOH HOH 733 A HOH 734 3 HOH HOH 734 A HOH 735 3 HOH HOH 735 A HOH 736 3 HOH HOH 736 A HOH 737 3 HOH HOH 737 A HOH 738 3 HOH HOH 738 A HOH 739 3 HOH HOH 739 A HOH 740 3 HOH HOH 740 A HOH 741 3 HOH HOH 741 A HOH 742 3 HOH HOH 742 A HOH 743 3 HOH HOH 743 A HOH 744 3 HOH HOH 744 A HOH 745 3 HOH HOH 745 A HOH 746 3 HOH HOH 746 A HOH 747 3 HOH HOH 747 A HOH 748 3 HOH HOH 748 A HOH 749 3 HOH HOH 749 A HOH 750 3 HOH HOH 750 A HOH 751 3 HOH HOH 751 A HOH 752 3 HOH HOH 752 A HOH 753 3 HOH HOH 753 A HOH 754 3 HOH HOH 754 A HOH 755 3 HOH HOH 755 A HOH 756 3 HOH HOH 756 A HOH 757 3 HOH HOH 757 A HOH 758 3 HOH HOH 758 A HOH 759 3 HOH HOH 759 A HOH 760 3 HOH HOH 760 A HOH 761 3 HOH HOH 761 A HOH 762 3 HOH HOH 762 A HOH 763 3 HOH HOH 763 A HOH 764 3 HOH HOH 764 A HOH 765 3 HOH HOH 765 A HOH 766 3 HOH HOH 766 A HOH 767 3 HOH HOH 767 A HOH 768 3 HOH HOH 768 A HOH 769 3 HOH HOH 769 A HOH 770 3 HOH HOH 770 A HOH 771 3 HOH HOH 771 A HOH 772 3 HOH HOH 772 A HOH 773 3 HOH HOH 773 A HOH 774 3 HOH HOH 774 A HOH 775 3 HOH HOH 775 A HOH 776 3 HOH HOH 776 A HOH 777 3 HOH HOH 777 A HOH 778 3 HOH HOH 778 A HOH 779 3 HOH HOH 779 A HOH 780 3 HOH HOH 780 A HOH 781 3 HOH HOH 781 A HOH 782 3 HOH HOH 782 A HOH 783 3 HOH HOH 783 A HOH 784 3 HOH HOH 784 A HOH 785 3 HOH HOH 785 A HOH 786 3 HOH HOH 786 A HOH 787 3 HOH HOH 787 A HOH 788 3 HOH HOH 788 A HOH 789 3 HOH HOH 789 A HOH 790 3 HOH HOH 790 A HOH 791 3 HOH HOH 791 A HOH 792 3 HOH HOH 792 A HOH 793 3 HOH HOH 793 A HOH 794 3 HOH HOH 794 A HOH 795 3 HOH HOH 795 A HOH 796 3 HOH HOH 796 A HOH 797 3 HOH HOH 797 A HOH 798 3 HOH HOH 798 A HOH 799 3 HOH HOH 799 A HOH 800 3 HOH HOH 800 A HOH 801 3 HOH HOH 801 A HOH 802 3 HOH HOH 802 A HOH 803 3 HOH HOH 803 A HOH 804 3 HOH HOH 804 A HOH 805 3 HOH HOH 805 A HOH 806 3 HOH HOH 806 A MSE 1 n 1 MSE 1 A HIS 2 n 2 HIS 2 A THR 3 n 3 THR 3 A ALA 4 n 4 ALA 4 A GLU 5 n 5 GLU 5 A PHE 6 n 6 PHE 6 A LEU 7 n 7 LEU 7 A GLU 8 n 8 GLU 8 A THR 9 n 9 THR 9 A GLU 10 n 10 GLU 10 A PRO 11 n 11 PRO 11 A THR 12 n 12 THR 12 A GLU 13 n 13 GLU 13 A ILE 14 n 14 ILE 14 A SER 15 n 15 SER 15 A SER 16 n 16 SER 16 A VAL 17 n 17 VAL 17 A LEU 18 n 18 LEU 18 A ALA 19 n 19 ALA 19 A GLY 20 n 20 GLY 20 A GLY 21 n 21 GLY 21 A TYR 22 n 22 TYR 22 A ASN 23 n 23 ASN 23 A HIS 24 n 24 HIS 24 A PRO 25 n 25 PRO 25 A LEU 26 n 26 LEU 26 A LEU 27 n 27 LEU 27 A ARG 28 n 28 ARG 28 A GLN 29 n 29 GLN 29 A TRP 30 n 30 TRP 30 A GLN 31 n 31 GLN 31 A SER 32 n 32 SER 32 A GLU 33 n 33 GLU 33 A ARG 34 n 34 ARG 34 A GLN 35 n 35 GLN 35 A LEU 36 n 36 LEU 36 A THR 37 n 37 THR 37 A LYS 38 n 38 LYS 38 A ASN 39 n 39 ASN 39 A MSE 40 n 40 MSE 40 A LEU 41 n 41 LEU 41 A ILE 42 n 42 ILE 42 A PHE 43 n 43 PHE 43 A PRO 44 n 44 PRO 44 A LEU 45 n 45 LEU 45 A PHE 46 n 46 PHE 46 A ILE 47 n 47 ILE 47 A SER 48 n 48 SER 48 A ASP 49 n 49 ASP 49 A ASN 50 n 50 ASN 50 A PRO 51 n 51 PRO 51 A ASP 52 n 52 ASP 52 A ASP 53 n 53 ASP 53 A PHE 54 n 54 PHE 54 A THR 55 n 55 THR 55 A GLU 56 n 56 GLU 56 A ILE 57 n 57 ILE 57 A ASP 58 n 58 ASP 58 A SER 59 n 59 SER 59 A ALA 60 n 60 ALA 60 A PRO 61 n 61 PRO 61 A ASN 62 n 62 ASN 62 A ILE 63 n 63 ILE 63 A ASN 64 n 64 ASN 64 A ARG 65 n 65 ARG 65 A ILE 66 n 66 ILE 66 A GLY 67 n 67 GLY 67 A VAL 68 n 68 VAL 68 A ASN 69 n 69 ASN 69 A ARG 70 n 70 ARG 70 A LEU 71 n 71 LEU 71 A LYS 72 n 72 LYS 72 A ASP 73 n 73 ASP 73 A TYR 74 n 74 TYR 74 A LEU 75 n 75 LEU 75 A LYS 76 n 76 LYS 76 A PRO 77 n 77 PRO 77 A LEU 78 n 78 LEU 78 A VAL 79 n 79 VAL 79 A ALA 80 n 80 ALA 80 A LYS 81 n 81 LYS 81 A GLY 82 n 82 GLY 82 A LEU 83 n 83 LEU 83 A ARG 84 n 84 ARG 84 A SER 85 n 85 SER 85 A VAL 86 n 86 VAL 86 A ILE 87 n 87 ILE 87 A LEU 88 n 88 LEU 88 A PHE 89 n 89 PHE 89 A GLY 90 n 90 GLY 90 A VAL 91 n 91 VAL 91 A PRO 92 n 92 PRO 92 A LEU 93 n 93 LEU 93 A ILE 94 n 94 ILE 94 A PRO 95 n 95 PRO 95 A GLY 96 n 96 GLY 96 A THR 97 n 97 THR 97 A LYS 98 n 98 LYS 98 A ASP 99 n 99 ASP 99 A PRO 100 n 100 PRO 100 A VAL 101 n 101 VAL 101 A GLY 102 n 102 GLY 102 A THR 103 n 103 THR 103 A ALA 104 n 104 ALA 104 A ALA 105 n 105 ALA 105 A ASP 106 n 106 ASP 106 A ASP 107 n 107 ASP 107 A PRO 108 n 108 PRO 108 A ALA 109 n 109 ALA 109 A GLY 110 n 110 GLY 110 A PRO 111 n 111 PRO 111 A VAL 112 n 112 VAL 112 A ILE 113 n 113 ILE 113 A GLN 114 n 114 GLN 114 A GLY 115 n 115 GLY 115 A ILE 116 n 116 ILE 116 A ARG 117 n 117 ARG 117 A PHE 118 n 118 PHE 118 A ILE 119 n 119 ILE 119 A ARG 120 n 120 ARG 120 A GLU 121 n 121 GLU 121 A LYS 122 n 122 LYS 122 A PHE 123 n 123 PHE 123 A PRO 124 n 124 PRO 124 A GLU 125 n 125 GLU 125 A LEU 126 n 126 LEU 126 A TYR 127 n 127 TYR 127 A ILE 128 n 128 ILE 128 A ILE 129 n 129 ILE 129 A CYS 130 n 130 CYS 130 A ASP 131 n 131 ASP 131 A VAL 132 n 132 VAL 132 A CYS 133 n 133 CYS 133 A LEU 134 n 134 LEU 134 A CYS 135 n 135 CYS 135 A GLU 136 n 136 GLU 136 A TYR 137 n 137 TYR 137 A THR 138 n 138 THR 138 A SER 139 n 139 SER 139 A HIS 140 n 140 HIS 140 A GLY 141 n 141 GLY 141 A HIS 142 n 142 HIS 142 A CYS 143 n 143 CYS 143 A GLY 144 n 144 GLY 144 A VAL 145 n 145 VAL 145 A LEU 146 n 146 LEU 146 A TYR 147 n 147 TYR 147 A ASP 148 n 148 ASP 148 A ASP 149 n 149 ASP 149 A GLY 150 n 150 GLY 150 A THR 151 n 151 THR 151 A ILE 152 n 152 ILE 152 A ASN 153 n 153 ASN 153 A ARG 154 n 154 ARG 154 A GLU 155 n 155 GLU 155 A ARG 156 n 156 ARG 156 A SER 157 n 157 SER 157 A VAL 158 n 158 VAL 158 A SER 159 n 159 SER 159 A ARG 160 n 160 ARG 160 A LEU 161 n 161 LEU 161 A ALA 162 n 162 ALA 162 A ALA 163 n 163 ALA 163 A VAL 164 n 164 VAL 164 A ALA 165 n 165 ALA 165 A VAL 166 n 166 VAL 166 A ASN 167 n 167 ASN 167 A TYR 168 n 168 TYR 168 A ALA 169 n 169 ALA 169 A LYS 170 n 170 LYS 170 A ALA 171 n 171 ALA 171 A GLY 172 n 172 GLY 172 A ALA 173 n 173 ALA 173 A HIS 174 n 174 HIS 174 A CYS 175 n 175 CYS 175 A VAL 176 n 176 VAL 176 A ALA 177 n 177 ALA 177 A PRO 178 n 178 PRO 178 A SER 179 n 179 SER 179 A ASP 180 n 180 ASP 180 A MSE 181 n 181 MSE 181 A ILE 182 n 182 ILE 182 A ASP 183 n 183 ASP 183 A GLY 184 n 184 GLY 184 A ARG 185 n 185 ARG 185 A ILE 186 n 186 ILE 186 A ARG 187 n 187 ARG 187 A ASP 188 n 188 ASP 188 A ILE 189 n 189 ILE 189 A LYS 190 n 190 LYS 190 A ARG 191 n 191 ARG 191 A GLY 192 n 192 GLY 192 A LEU 193 n 193 LEU 193 A ILE 194 n 194 ILE 194 A ASN 195 n 195 ASN 195 A ALA 196 n 196 ALA 196 A ASN 197 n 197 ASN 197 A LEU 198 n 198 LEU 198 A ALA 199 n 199 ALA 199 A HIS 200 n 200 HIS 200 A LYS 201 n 201 LYS 201 A THR 202 n 202 THR 202 A PHE 203 n 203 PHE 203 A VAL 204 n 204 VAL 204 A LEU 205 n 205 LEU 205 A SER 206 n 206 SER 206 A TYR 207 n 207 TYR 207 A ALA 208 n 208 ALA 208 A ALA 209 n 209 ALA 209 A LYS 210 n 210 LYS 210 A PHE 211 n 211 PHE 211 A SER 212 n 212 SER 212 A GLY 213 n 213 GLY 213 A ASN 214 n 214 ASN 214 A LEU 215 n 215 LEU 215 A TYR 216 n 216 TYR 216 A GLY 217 n 217 GLY 217 A PRO 218 n 218 PRO 218 A ALA 219 n 219 ALA 219 A n 220 220 A n 221 221 A n 222 222 A n 223 223 A n 224 224 A n 225 225 A n 226 226 A n 227 227 A n 228 228 A n 229 229 A n 230 230 A n 231 231 A n 232 232 A n 233 233 A CYS 234 n 234 CYS 234 A TYR 235 n 235 TYR 235 A GLN 236 n 236 GLN 236 A LEU 237 n 237 LEU 237 A PRO 238 n 238 PRO 238 A PRO 239 n 239 PRO 239 A ALA 240 n 240 ALA 240 A GLY 241 n 241 GLY 241 A ARG 242 n 242 ARG 242 A GLY 243 n 243 GLY 243 A LEU 244 n 244 LEU 244 A ALA 245 n 245 ALA 245 A ARG 246 n 246 ARG 246 A ARG 247 n 247 ARG 247 A ALA 248 n 248 ALA 248 A LEU 249 n 249 LEU 249 A GLU 250 n 250 GLU 250 A ARG 251 n 251 ARG 251 A ASP 252 n 252 ASP 252 A MSE 253 n 253 MSE 253 A SER 254 n 254 SER 254 A GLU 255 n 255 GLU 255 A GLY 256 n 256 GLY 256 A ALA 257 n 257 ALA 257 A ASP 258 n 258 ASP 258 A GLY 259 n 259 GLY 259 A ILE 260 n 260 ILE 260 A ILE 261 n 261 ILE 261 A VAL 262 n 262 VAL 262 A LYS 263 n 263 LYS 263 A PRO 264 n 264 PRO 264 A SER 265 n 265 SER 265 A THR 266 n 266 THR 266 A PHE 267 n 267 PHE 267 A TYR 268 n 268 TYR 268 A LEU 269 n 269 LEU 269 A ASP 270 n 270 ASP 270 A ILE 271 n 271 ILE 271 A VAL 272 n 272 VAL 272 A ARG 273 n 273 ARG 273 A ASP 274 n 274 ASP 274 A ALA 275 n 275 ALA 275 A SER 276 n 276 SER 276 A GLU 277 n 277 GLU 277 A ILE 278 n 278 ILE 278 A CYS 279 n 279 CYS 279 A LYS 280 n 280 LYS 280 A ASP 281 n 281 ASP 281 A LEU 282 n 282 LEU 282 A PRO 283 n 283 PRO 283 A ILE 284 n 284 ILE 284 A CYS 285 n 285 CYS 285 A ALA 286 n 286 ALA 286 A TYR 287 n 287 TYR 287 A HIS 288 n 288 HIS 288 A VAL 289 n 289 VAL 289 A SER 290 n 290 SER 290 A GLY 291 n 291 GLY 291 A GLU 292 n 292 GLU 292 A TYR 293 n 293 TYR 293 A ALA 294 n 294 ALA 294 A MSE 295 n 295 MSE 295 A LEU 296 n 296 LEU 296 A HIS 297 n 297 HIS 297 A ALA 298 n 298 ALA 298 A ALA 299 n 299 ALA 299 A ALA 300 n 300 ALA 300 A GLU 301 n 301 GLU 301 A LYS 302 n 302 LYS 302 A GLY 303 n 303 GLY 303 A VAL 304 n 304 VAL 304 A VAL 305 n 305 VAL 305 A ASP 306 n 306 ASP 306 A LEU 307 n 307 LEU 307 A LYS 308 n 308 LYS 308 A THR 309 n 309 THR 309 A ILE 310 n 310 ILE 310 A ALA 311 n 311 ALA 311 A PHE 312 n 312 PHE 312 A GLU 313 n 313 GLU 313 A SER 314 n 314 SER 314 A HIS 315 n 315 HIS 315 A GLN 316 n 316 GLN 316 A GLY 317 n 317 GLY 317 A PHE 318 n 318 PHE 318 A LEU 319 n 319 LEU 319 A ARG 320 n 320 ARG 320 A ALA 321 n 321 ALA 321 A GLY 322 n 322 GLY 322 A ALA 323 n 323 ALA 323 A ARG 324 n 324 ARG 324 A LEU 325 n 325 LEU 325 A ILE 326 n 326 ILE 326 A ILE 327 n 327 ILE 327 A THR 328 n 328 THR 328 A TYR 329 n 329 TYR 329 A LEU 330 n 330 LEU 330 A ALA 331 n 331 ALA 331 A PRO 332 n 332 PRO 332 A GLU 333 n 333 GLU 333 A PHE 334 n 334 PHE 334 A LEU 335 n 335 LEU 335 A ASP 336 n 336 ASP 336 A TRP 337 n 337 TRP 337 A LEU 338 n 338 LEU 338 A ASP 339 n 339 ASP 339 A GLU 340 n 340 GLU 340 A author_and_software_defined_assembly PISA,PQS 8 octameric 53480 -721 79160 A CYS 133 A SG CYS 133 1_555 A ZN 400 B ZN ZN 1_555 A CYS 135 A SG CYS 135 1_555 117.8 A CYS 133 A SG CYS 133 1_555 A ZN 400 B ZN ZN 1_555 A CYS 143 A SG CYS 143 1_555 103.8 A CYS 135 A SG CYS 135 1_555 A ZN 400 B ZN ZN 1_555 A CYS 143 A SG CYS 143 1_555 121.2 A MSE 1 SELENOMETHIONINE A MSE 1 MET A MSE 40 SELENOMETHIONINE A MSE 40 MET A MSE 181 SELENOMETHIONINE A MSE 181 MET A MSE 253 SELENOMETHIONINE A MSE 253 MET A MSE 295 SELENOMETHIONINE A MSE 295 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_555 -x,-y,z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 3_555 -y,x,z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 4_555 y,-x,z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 5_555 -x,y,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 6_555 x,-y,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 7_555 y,x,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 8_555 -y,-x,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A O PHE 43 A O PHE 43 A N ILE 87 A N ILE 87 A O VAL 86 A O VAL 86 A N TYR 127 A N TYR 127 A O CYS 130 A O CYS 130 A N CYS 175 A N CYS 175 A O THR 55 A O THR 55 A N ARG 65 A N ARG 65 A O ILE 260 A O ILE 260 A N PRO 283 A N PRO 283 A O ALA 286 A O ALA 286 A N LEU 325 A N LEU 325 1 A ARG 220 A ARG 220 1 Y 1 A ASP 221 A ASP 221 1 Y 1 A ALA 222 A ALA 222 1 Y 1 A ALA 223 A ALA 223 1 Y 1 A CYS 224 A CYS 224 1 Y 1 A SER 225 A SER 225 1 Y 1 A ALA 226 A ALA 226 1 Y 1 A PRO 227 A PRO 227 1 Y 1 A SER 228 A SER 228 1 Y 1 A ASN 229 A ASN 229 1 Y 1 A GLY 230 A GLY 230 1 Y 1 A ASP 231 A ASP 231 1 Y 1 A ARG 232 A ARG 232 1 Y 1 A LYS 233 A LYS 233 1 Y 1 A A O O HOH HOH 550 617 1.98 1 A A O O HOH HOH 568 663 2.05 1 A A O O HOH HOH 614 621 2.17 1 -3.04 0.50 120.30 117.26 A A A NE CZ NH1 ARG ARG ARG 34 34 34 N 1 9.30 1.50 119.30 128.60 A A A C N CA ILE PRO PRO 94 95 95 Y 1 9.49 1.10 114.20 123.69 A A A CA CB SG CYS CYS CYS 175 175 175 N 1 13.37 2.20 98.90 112.27 A A A CG SE CE MSE MSE MSE 181 181 181 N 1 -3.60 0.50 120.30 116.70 A A A NE CZ NH1 ARG ARG ARG 242 242 242 N 1 -10.36 1.60 110.90 100.54 A A A CG1 CB CG2 VAL VAL VAL 262 262 262 N 1 6.77 1.10 114.20 120.97 A A A CA CB SG CYS CYS CYS 285 285 285 N 1 A A O O HOH HOH 797 797 0.37 1_555 6_555 1 A A O O HOH HOH 726 726 0.94 1_555 16_555 1 A A O O HOH HOH 675 675 1.52 1_555 5_555 1 A PRO 51 -49.59 -13.85 1 A ASP 53 -45.06 164.25 1 A PHE 54 164.33 62.86 1 A SER 59 -165.29 -67.77 1 A ALA 60 -161.34 -2.47 1 A ASN 62 -142.32 18.98 1 A PRO 95 -38.56 -6.65 1 A ASP 107 -56.32 108.62 1 A PRO 108 -47.93 -16.12 1 A PRO 124 -64.16 10.10 1 A ASP 148 -55.56 105.41 1 A MSE 181 84.24 7.00 1 A PRO 218 -42.87 156.72 1 A GLN 236 -161.36 118.62 1 A PRO 264 -66.89 -171.18 1 A CYS 279 -105.98 43.67 0.2700000 0.1980000 2.3 6 19072 99.9 1 THROUGHOUT 3.0 MAD 2.3 6 307 2836 2 0 2527 0.011 0.023 2.3 35.6 1AW5 459575 3.0 0.0880000 1 6.6 16.8 99.9 0.1780000 2.30 2.38 3.9 1 9.3 100.0 model building DM phasing MLPHARE model building VECSUM refinement RESTRAIN data reduction MOSFLM data scaling CCP4 (AGROVATA data scaling ROTAVATA phasing DM phasing VECSUM 5-AMINOLEVULINATE DEHYDRATASE FROM SACCHAROMYCES CEREVISIAE 1 N N 2 N N 2 N N 3 N N A ILE 14 A ILE 14 HELX_P A SER 16 A SER 16 5 1 3 A ALA 19 A ALA 19 HELX_P A GLY 21 A GLY 21 5 2 3 A PRO 25 A PRO 25 HELX_P A TRP 30 A TRP 30 5 3 6 A LYS 38 A LYS 38 HELX_P A MSE 40 A MSE 40 5 4 3 A LEU 71 A LEU 71 HELX_P A ALA 80 A ALA 80 1 5 10 A THR 103 A THR 103 HELX_P A ASP 106 A ASP 106 5 6 4 A PRO 111 A PRO 111 HELX_P A LYS 122 A LYS 122 1 7 12 A ARG 154 A ARG 154 HELX_P A ALA 171 A ALA 171 1 8 18 A ARG 185 A ARG 185 HELX_P A ASN 195 A ASN 195 1 9 11 A ARG 242 A ARG 242 HELX_P A SER 254 A SER 254 1 10 13 A THR 266 A THR 266 HELX_P A ILE 278 A ILE 278 5 11 13 A SER 290 A SER 290 HELX_P A GLU 301 A GLU 301 1 12 12 A LEU 307 A LEU 307 HELX_P A ALA 321 A ALA 321 1 13 15 A ALA 331 A ALA 331 HELX_P A TRP 337 A TRP 337 1 14 7 covale 1.329 both A MSE 1 A C MSE 1 1_555 A HIS 2 A N HIS 2 1_555 covale 1.332 both A ASN 39 A C ASN 39 1_555 A MSE 40 A N MSE 40 1_555 covale 1.325 both A MSE 40 A C MSE 40 1_555 A LEU 41 A N LEU 41 1_555 covale 1.322 both A ASP 180 A C ASP 180 1_555 A MSE 181 A N MSE 181 1_555 covale 1.325 both A MSE 181 A C MSE 181 1_555 A ILE 182 A N ILE 182 1_555 covale 1.330 both A ASP 252 A C ASP 252 1_555 A MSE 253 A N MSE 253 1_555 covale 1.329 both A MSE 253 A C MSE 253 1_555 A SER 254 A N SER 254 1_555 covale 1.330 both A ALA 294 A C ALA 294 1_555 A MSE 295 A N MSE 295 1_555 covale 1.328 both A MSE 295 A C MSE 295 1_555 A LEU 296 A N LEU 296 1_555 metalc 2.061 A CYS 133 A SG CYS 133 1_555 A ZN 400 B ZN ZN 1_555 metalc 2.282 A CYS 135 A SG CYS 135 1_555 A ZN 400 B ZN ZN 1_555 metalc 2.031 A CYS 143 A SG CYS 143 1_555 A ZN 400 B ZN ZN 1_555 metalc 2.274 A CYS 234 A SG CYS 234 1_555 A ZN 401 C ZN ZN 1_555 DEHYDRATASE DEHYDRATASE, TETRAPYRROLE BIOSYNTHESIS, ALDOLASE, TIM-BARREL OCTAMER A LYS 263 A LYS 263 1 A PRO 264 A PRO 264 -2.67 HEM2_YEAST UNP 1 1 P05373 1 340 1AW5 2 340 P05373 A 1 2 340 1 MET engineered mutation MSE 40 1AW5 A P05373 UNP 40 40 1 LEU conflict ALA 60 1AW5 A P05373 UNP 60 60 1 LYS conflict ARG 117 1AW5 A P05373 UNP 117 117 1 TYR conflict LYS 122 1AW5 A P05373 UNP 122 122 1 MET engineered mutation MSE 181 1AW5 A P05373 UNP 181 181 1 PHE conflict ALA 219 1AW5 A P05373 UNP 219 219 1 MET engineered mutation MSE 253 1AW5 A P05373 UNP 253 253 1 MET engineered mutation VAL 272 1AW5 A P05373 UNP 272 272 1 MET engineered mutation MSE 295 1AW5 A P05373 UNP 295 295 4 2 3 parallel parallel parallel anti-parallel parallel parallel A PHE 43 A PHE 43 A SER 48 A SER 48 A SER 85 A SER 85 A VAL 91 A VAL 91 A TYR 127 A TYR 127 A VAL 132 A VAL 132 A CYS 175 A CYS 175 A PRO 178 A PRO 178 A PHE 54 A PHE 54 A GLU 56 A GLU 56 A ASN 64 A ASN 64 A ILE 66 A ILE 66 A GLY 259 A GLY 259 A VAL 262 A VAL 262 A PRO 283 A PRO 283 A TYR 287 A TYR 287 A LEU 325 A LEU 325 A ILE 327 A ILE 327 LYS 263 FORMS SCHIFF BASE WITH SUBSTRATE. LYS 210 IS SPATIALLY ADJACENT AND IS ALSO IMPLICATED IN CATALYSIS. Unknown 2 BINDING SITE FOR RESIDUE ZN A 400 A ZN 400 Software 3 BINDING SITE FOR RESIDUE ZN A 401 A ZN 401 Software 2 A LYS 263 A LYS 263 2 1_555 A LYS 210 A LYS 210 2 1_555 A CYS 133 A CYS 133 3 1_555 A CYS 135 A CYS 135 3 1_555 A CYS 143 A CYS 143 3 1_555 A HIS 142 A HIS 142 2 1_555 A CYS 234 A CYS 234 2 1_555 97 I 4 2 2