0.004960
0.000000
0.000859
0.000000
0.028944
0.000000
0.000000
0.000000
0.017126
0.00000
0.00000
0.00000
Batchelor, A.H.
Wolberger, C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
99.83
90.00
201.600
34.550
59.260
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C9 H12 Br N2 O8 P
387.078
n
5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
DNA linking
C9 H13 Br N3 O7 P
386.093
n
5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE
DNA linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
N
C
N
76
N
N
N
77
N
C
N
78
N
C
N
79
N
C
N
80
N
O
N
81
N
O
N
82
N
BR
N
83
R
C
N
84
N
C
N
85
S
C
N
86
R
C
N
87
N
O
N
88
N
O
N
89
N
C
N
90
N
O
N
91
N
P
N
92
N
O
N
93
N
O
N
94
N
O
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
BR
N
108
N
P
N
109
N
O
N
110
N
O
N
111
N
O
N
112
N
N
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
N
N
117
N
C
N
118
N
N
N
119
N
C
N
120
N
C
N
121
N
C
N
122
R
C
N
123
N
O
N
124
R
C
N
125
S
C
N
126
N
O
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
N
N
142
R
C
N
143
N
C
N
144
N
O
N
145
N
C
N
146
N
S
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
O
N
156
N
P
N
157
N
O
N
158
N
O
N
159
N
O
N
160
N
C
N
161
R
C
N
162
N
O
N
163
S
C
N
164
N
O
N
165
N
C
N
166
R
C
Y
167
N
N
Y
168
N
C
Y
169
N
N
Y
170
N
C
Y
171
N
C
N
172
N
N
Y
173
N
N
Y
174
N
C
Y
175
N
N
Y
176
N
C
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
O
N
192
N
P
N
193
N
O
N
194
N
O
N
195
N
O
N
196
N
C
N
197
R
C
N
198
N
O
N
199
S
C
N
200
N
O
N
201
N
C
N
202
R
C
N
203
N
N
N
204
N
C
N
205
N
O
N
206
N
N
N
207
N
C
N
208
N
N
N
209
N
C
N
210
N
C
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
O
N
226
N
P
N
227
N
O
N
228
N
O
N
229
N
O
N
230
N
C
N
231
R
C
N
232
N
O
N
233
S
C
N
234
N
O
N
235
N
C
N
236
R
C
Y
237
N
N
Y
238
N
C
Y
239
N
N
Y
240
N
C
N
241
N
C
N
242
N
O
N
243
N
N
N
244
N
C
N
245
N
N
N
246
N
N
Y
247
N
C
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
O
N
263
N
P
N
264
N
O
N
265
N
O
N
266
N
O
N
267
N
C
N
268
R
C
N
269
N
O
N
270
S
C
N
271
N
O
N
272
N
C
N
273
R
C
N
274
N
N
N
275
N
C
N
276
N
O
N
277
N
N
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
C
N
282
N
C
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
N
N
299
S
C
N
300
N
C
N
301
N
O
N
302
N
C
N
303
N
C
N
304
N
C
N
305
N
O
N
306
N
N
N
307
N
O
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
N
323
N
C
N
324
N
C
N
325
N
O
N
326
N
O
N
327
N
O
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
N
N
338
N
C
N
339
N
C
N
340
N
O
N
341
N
O
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
N
N
348
S
C
N
349
N
C
N
350
N
O
N
351
N
C
Y
352
N
C
Y
353
N
N
Y
354
N
C
Y
355
N
C
Y
356
N
N
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
O
N
369
N
H
N
370
N
H
N
371
N
N
N
372
S
C
N
373
N
C
N
374
N
O
N
375
S
C
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
N
N
394
S
C
N
395
N
C
N
396
N
O
N
397
N
C
N
398
N
C
N
399
N
C
N
400
N
C
N
401
N
O
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
N
N
416
S
C
N
417
N
C
N
418
N
O
N
419
N
C
N
420
N
C
N
421
N
C
N
422
N
C
N
423
N
N
N
424
N
O
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
N
N
441
S
C
N
442
N
C
N
443
N
O
N
444
N
C
N
445
N
C
N
446
N
S
N
447
N
C
N
448
N
O
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
N
N
461
S
C
N
462
N
C
N
463
N
O
N
464
N
C
Y
465
N
C
Y
466
N
C
Y
467
N
C
Y
468
N
C
Y
469
N
C
Y
470
N
C
N
471
N
O
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
N
N
484
S
C
N
485
N
C
N
486
N
O
N
487
N
C
N
488
N
C
N
489
N
C
N
490
N
O
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
N
N
501
S
C
N
502
N
C
N
503
N
O
N
504
N
C
N
505
N
O
N
506
N
O
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
N
N
515
S
C
N
516
N
C
N
517
N
O
N
518
R
C
N
519
N
O
N
520
N
C
N
521
N
O
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
529
N
H
N
530
N
H
N
531
N
N
N
532
S
C
N
533
N
C
N
534
N
O
N
535
N
C
Y
536
N
C
Y
537
N
C
Y
538
N
C
Y
539
N
N
Y
540
N
C
Y
541
N
C
Y
542
N
C
Y
543
N
C
Y
544
N
C
N
545
N
O
N
546
N
H
N
547
N
H
N
548
N
H
N
549
N
H
N
550
N
H
N
551
N
H
N
552
N
H
N
553
N
H
N
554
N
H
N
555
N
H
N
556
N
H
N
557
N
H
N
558
N
N
N
559
S
C
N
560
N
C
N
561
N
O
N
562
N
C
Y
563
N
C
Y
564
N
C
Y
565
N
C
Y
566
N
C
Y
567
N
C
Y
568
N
C
N
569
N
O
N
570
N
O
N
571
N
H
N
572
N
H
N
573
N
H
N
574
N
H
N
575
N
H
N
576
N
H
N
577
N
H
N
578
N
H
N
579
N
H
N
580
N
H
N
581
N
H
N
582
N
N
N
583
S
C
N
584
N
C
N
585
N
O
N
586
N
C
N
587
N
C
N
588
N
C
N
589
N
O
N
590
N
H
N
591
N
H
N
592
N
H
N
593
N
H
N
594
N
H
N
595
N
H
N
596
N
H
N
597
N
H
N
598
N
H
N
599
N
H
N
600
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
doub
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
doub
N
79
N
doub
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
doub
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
doub
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
doub
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
doub
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
Y
175
N
sing
Y
176
N
sing
Y
177
N
doub
N
178
N
sing
Y
179
N
sing
Y
180
N
sing
Y
181
N
doub
N
182
N
sing
Y
183
N
doub
N
184
N
sing
N
185
N
sing
Y
186
N
sing
Y
187
N
doub
N
188
N
sing
Y
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
doub
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
sing
Y
249
N
sing
Y
250
N
doub
N
251
N
sing
Y
252
N
sing
N
253
N
sing
Y
254
N
doub
N
255
N
doub
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
doub
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
doub
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
doub
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
doub
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
Y
358
N
sing
Y
359
N
doub
Y
360
N
doub
N
361
N
sing
Y
362
N
sing
N
363
N
sing
Y
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
doub
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
doub
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
doub
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
doub
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
doub
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
Y
466
N
doub
Y
467
N
sing
Y
468
N
sing
N
469
N
sing
Y
470
N
doub
N
471
N
sing
Y
472
N
doub
N
473
N
sing
Y
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
doub
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
doub
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
doub
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
doub
N
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
Y
535
N
doub
Y
536
N
sing
Y
537
N
sing
N
538
N
sing
Y
539
N
doub
Y
540
N
sing
Y
541
N
sing
N
542
N
sing
Y
543
N
sing
Y
544
N
doub
N
545
N
sing
Y
546
N
doub
N
547
N
sing
Y
548
N
sing
N
549
N
sing
N
550
N
sing
N
551
N
sing
N
552
N
sing
N
553
N
sing
N
554
N
sing
N
555
N
sing
N
556
N
sing
N
557
N
sing
N
558
N
doub
N
559
N
sing
N
560
N
sing
N
561
N
sing
N
562
N
sing
Y
563
N
doub
Y
564
N
sing
Y
565
N
sing
N
566
N
sing
Y
567
N
doub
N
568
N
sing
Y
569
N
doub
N
570
N
sing
Y
571
N
sing
N
572
N
sing
N
573
N
sing
N
574
N
sing
N
575
N
sing
N
576
N
sing
N
577
N
sing
N
578
N
sing
N
579
N
sing
N
580
N
sing
N
581
N
sing
N
582
N
doub
N
583
N
sing
N
584
N
sing
N
585
N
sing
N
586
N
sing
N
587
N
sing
N
588
N
sing
N
589
N
sing
N
590
N
sing
N
591
N
sing
N
592
N
sing
N
593
N
sing
US
Science
SCIEAS
0038
0036-8075
279
1037
1041
10.1126/science.279.5353.1037
9461436
The structure of GABPalpha/beta: an ETS domain- ankyrin repeat heterodimer bound to DNA.
1998
10.2210/pdb1awc/pdb
pdb_00001awc
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.00
1
SPHERICAL RH COATED
IMAGE PLATE
1996-05-15
FUJI
SAGITALLY FOCUSED SI(111)
SINGLE WAVELENGTH
M
x-ray
1
1.0
X4A
NSLS
SYNCHROTRON
NSLS BEAMLINE X4A
6712.888
DNA (5'-D(*AP*AP*(BRU)P*GP*AP*CP*CP*GP*GP*AP*AP*GP*TP*AP*(CBR)P*AP*CP*(CBR)P*GP*GP*A)-3')
1
syn
polymer
6525.857
DNA (5'-D(*TP*TP*CP*CP*GP*GP*(BRU)P*GP*(BRU)P*AP*CP*TP*TP*CP*CP*GP*GP*TP*CP*AP*T)-3')
1
syn
polymer
13065.230
PROTEIN (GA BINDING PROTEIN ALPHA)
ETS DOMAIN PLUS 30 C-TERMINAL RESIDUES
1
man
polymer
16834.010
PROTEIN (GA BINDING PROTEIN BETA 1)
ANKYRIN REPEAT DOMAIN
1
man
polymer
18.015
water
46
nat
water
GABPALPHA, GABP-ALPHA SUBUNIT
GABPBETA1, GABP-BETA-1 SUBUNIT, GABPB1
no
yes
(DA)(DA)(BRU)(DG)(DA)(DC)(DC)(DG)(DG)(DA)(DA)(DG)(DT)(DA)(CBR)(DA)(DC)(CBR)(DG)
(DG)(DA)
AAUGACCGGAAGTACACCGGA
D
polydeoxyribonucleotide
no
yes
(DT)(DT)(DC)(DC)(DG)(DG)(BRU)(DG)(BRU)(DA)(DC)(DT)(DT)(DC)(DC)(DG)(DG)(DT)(DC)
(DA)(DT)
TTCCGGUGUACTTCCGGTCAT
E
polydeoxyribonucleotide
no
no
IQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKF
VCDLKTLIGYSAAELNRLVIECEQKKLARM
IQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKF
VCDLKTLIGYSAAELNRLVIECEQKKLARM
A
polypeptide(L)
no
no
DLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA
NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQ
DLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA
NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQ
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
Escherichia
Escherichia coli
sample
GABP ALPHA
10090
Mus musculus
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
T7 PROMOTER
PALPHA8A
house mouse
Mus
Escherichia
Escherichia coli
sample
GABP BETA 1
10090
Mus musculus
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
T7 PROMOTER
PBB-79
1
2.40
49.0000
9.0
100 MM BIS-TRIS PROPANE PH 9, 12 % PEG 1000, 5 MM COBALTIC HEXAMINE CHLORIDE, 1 MM DTT, 20 MM TRIS, 1 MM EDTA, 0.001 % SODIUM AZIDE, pH 9.0
BIS-TRIS PROPANE
1
PEG 1000
1
[CO(NH3)6]Cl3
1
DTT
1
TRIS
1
EDTA
1
SODIUM AZIDE
1
PEG 1000
2
5.888
1
20
D
2
E
42
-1.773
D_DA2:DT42_E
1
-2.363
0.206
0.116
-0.395
0.397
1
20
D
3
E
41
3.429
D_BRU3:DA41_E
2
-4.135
-0.066
0.312
-0.497
1.618
1
19
D
4
E
40
-2.029
D_DG4:DC40_E
3
-6.582
0.457
-0.020
-0.281
10.878
1
20
D
5
E
39
-11.337
D_DA5:DT39_E
4
-4.745
0.262
0.063
0.247
6.129
1
19
D
6
E
38
-10.288
D_DC6:DG38_E
5
-8.434
1.285
-0.738
-0.555
-13.874
1
19
D
7
E
37
-0.782
D_DC7:DG37_E
6
-3.491
0.242
0.630
-0.252
7.766
1
19
D
8
E
36
1.317
D_DG8:DC36_E
7
3.518
-0.116
0.245
-0.336
6.434
1
19
D
9
E
35
-2.208
D_DG9:DC35_E
8
-8.032
-0.047
0.257
-0.120
4.148
1
20
D
10
E
34
-0.477
D_DA10:DT34_E
9
-15.509
-0.592
-0.188
0.009
0.377
1
20
D
11
E
33
1.383
D_DA11:DT33_E
10
-8.591
0.187
0.147
-0.027
-2.429
1
19
D
12
E
32
1.393
D_DG12:DC32_E
11
-13.135
-0.041
0.000
-0.147
-2.316
1
20
D
13
E
31
3.040
D_DT13:DA31_E
12
0.257
-0.005
0.114
-0.120
-0.192
1
20
D
14
E
30
4.979
D_DA14:BRU30_E
13
-0.628
0.238
0.144
-0.371
8.259
1
19
D
15
E
29
-0.436
D_CBR15:DG29_E
14
-8.568
0.178
0.053
-0.491
3.587
1
20
D
16
E
28
-0.987
D_DA16:BRU28_E
15
-8.778
0.465
-0.009
-0.420
1.697
1
19
D
17
E
27
0.468
D_DC17:DG27_E
16
-0.765
-0.340
0.127
-0.087
-0.152
1
19
D
18
E
26
-0.377
D_CBR18:DG26_E
17
0.278
1.233
-0.405
-0.623
0.153
1
19
D
19
E
25
-7.155
D_DG19:DC25_E
18
7.118
-0.701
-0.002
-0.417
6.118
1
19
D
20
E
24
1.934
D_DG20:DC24_E
19
-5.759
-0.423
0.166
-0.479
7.356
1
20
D
21
E
23
-5.599
D_DA21:DT23_E
20
-6.361
0.873
-0.115
-0.335
3.448
35.507
D
D
2
3
2.421
E
E
42
41
3.482
1.476
0.419
-0.532
DD_DA2BRU3:DA41DT42_EE
1
-0.796
1.305
35.469
-1.101
-0.810
3.324
38.918
D
D
3
4
4.967
E
E
41
40
3.309
3.304
-0.682
0.851
DD_BRU3DG4:DC40DA41_EE
2
2.241
-3.370
38.720
0.870
1.300
3.203
30.460
D
D
4
5
0.555
E
E
40
39
3.221
0.291
-0.603
-0.376
DD_DG4DA5:DT39DC40_EE
3
0.692
-1.316
30.451
-0.772
1.283
3.227
39.965
D
D
5
6
12.962
E
E
39
38
3.348
8.720
0.992
-0.859
DD_DA5DC6:DG38DT39_EE
4
9.068
-13.479
38.011
-2.292
-0.375
2.695
31.278
D
D
6
7
23.176
E
E
38
37
3.774
11.944
0.252
-1.332
DD_DC6DC7:DG37DG38_EE
5
-10.376
20.134
27.068
-4.877
-2.558
2.963
30.985
D
D
7
8
1.986
E
E
37
36
2.913
1.059
0.506
0.502
DD_DC7DG8:DC36DG37_EE
6
3.026
-5.673
30.823
0.757
-0.421
3.513
34.682
D
D
8
9
1.343
E
E
36
35
3.441
0.800
-1.286
-0.507
DD_DG8DG9:DC35DC36_EE
7
-2.600
4.366
34.579
-0.981
1.732
2.994
29.532
D
D
9
10
15.369
E
E
35
34
3.291
7.739
-0.290
-0.601
DD_DG9DA10:DT34DC35_EE
8
2.314
-4.595
28.430
-2.790
1.051
2.889
36.588
D
D
10
11
19.947
E
E
34
33
3.217
12.265
0.072
-0.372
DD_DA10DA11:DT33DT34_EE
9
-4.441
7.223
34.259
-2.224
-0.705
3.351
40.178
D
D
11
12
0.455
E
E
33
32
3.353
0.312
-0.166
-0.619
DD_DA11DG12:DC32DT33_EE
10
-3.379
4.925
40.040
-0.938
-0.153
3.454
26.902
D
D
12
13
-3.869
E
E
32
31
3.380
-1.798
-0.598
-0.793
DD_DG12DT13:DA31DC32_EE
11
-1.635
3.520
26.794
-1.221
0.847
3.188
34.397
D
D
13
14
14.978
E
E
31
30
3.179
8.747
-0.262
0.400
DD_DT13DA14:BRU30DA31_EE
12
-3.897
6.673
33.076
-0.680
-0.160
3.219
33.772
D
D
14
15
-7.724
E
E
30
29
3.216
-4.474
-0.131
-0.282
DD_DA14CBR15:DG29BRU30_EE
13
1.269
-2.192
33.459
0.231
0.428
3.356
38.768
D
D
15
16
4.582
E
E
29
28
3.370
3.038
-0.798
-0.355
DD_CBR15DA16:BRU28DG29_EE
14
-1.166
1.758
38.637
-0.918
1.055
3.326
29.390
D
D
16
17
0.949
E
E
28
27
3.367
0.481
0.289
-1.202
DD_DA16DC17:DG27BRU28_EE
15
-1.682
3.317
29.339
-2.474
-0.940
3.400
44.894
D
D
17
18
-4.051
E
E
27
26
3.427
-3.083
-0.003
-0.129
DD_DC17CBR18:DG26DG27_EE
16
6.048
-7.948
44.404
0.124
0.578
3.455
29.867
D
D
18
19
9.231
E
E
26
25
3.326
4.730
-0.067
1.154
DD_CBR18DG19:DC25DG26_EE
17
-2.983
5.820
29.350
1.211
-0.518
3.216
30.912
D
D
19
20
5.262
E
E
25
24
3.327
2.796
0.153
-0.754
DD_DG19DG20:DC24DC25_EE
18
-3.126
5.883
30.633
-1.959
-0.896
3.218
45.212
D
D
20
21
-1.728
E
E
24
23
3.297
-1.328
-1.204
0.102
DD_DG20DA21:DT23DC24_EE
19
2.740
-3.567
45.115
0.251
1.810
chem_comp_atom
chem_comp_bond
database_2
struct_conn
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
1998-03-18
1
1
2008-05-22
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
BNL
Y
NDB
1997-10-01
REL
REL
HOH
water
HOH
9
5
HOH
HOH
22
D
HOH
8
5
HOH
HOH
8
E
HOH
1
5
HOH
HOH
1
A
HOH
5
5
HOH
HOH
5
A
HOH
7
5
HOH
HOH
7
A
HOH
13
5
HOH
HOH
13
A
HOH
14
5
HOH
HOH
14
A
HOH
18
5
HOH
HOH
18
A
HOH
19
5
HOH
HOH
19
A
HOH
21
5
HOH
HOH
21
A
HOH
22
5
HOH
HOH
22
A
HOH
26
5
HOH
HOH
26
A
HOH
28
5
HOH
HOH
28
A
HOH
32
5
HOH
HOH
32
A
HOH
39
5
HOH
HOH
39
A
HOH
41
5
HOH
HOH
41
A
HOH
43
5
HOH
HOH
43
A
HOH
45
5
HOH
HOH
45
A
HOH
46
5
HOH
HOH
46
A
HOH
2
5
HOH
HOH
158
B
HOH
3
5
HOH
HOH
159
B
HOH
4
5
HOH
HOH
160
B
HOH
6
5
HOH
HOH
161
B
HOH
11
5
HOH
HOH
162
B
HOH
10
5
HOH
HOH
163
B
HOH
12
5
HOH
HOH
164
B
HOH
15
5
HOH
HOH
165
B
HOH
16
5
HOH
HOH
166
B
HOH
17
5
HOH
HOH
167
B
HOH
20
5
HOH
HOH
168
B
HOH
23
5
HOH
HOH
169
B
HOH
24
5
HOH
HOH
170
B
HOH
25
5
HOH
HOH
171
B
HOH
27
5
HOH
HOH
172
B
HOH
29
5
HOH
HOH
173
B
HOH
30
5
HOH
HOH
174
B
HOH
31
5
HOH
HOH
175
B
HOH
33
5
HOH
HOH
176
B
HOH
34
5
HOH
HOH
177
B
HOH
35
5
HOH
HOH
178
B
HOH
36
5
HOH
HOH
179
B
HOH
37
5
HOH
HOH
180
B
HOH
38
5
HOH
HOH
181
B
HOH
40
5
HOH
HOH
182
B
HOH
42
5
HOH
HOH
183
B
HOH
44
5
HOH
HOH
184
B
A
1
n
1
DA
1
D
A
2
n
2
DA
2
D
+U
3
n
3
BRU
3
D
G
4
n
4
DG
4
D
A
5
n
5
DA
5
D
C
6
n
6
DC
6
D
C
7
n
7
DC
7
D
G
8
n
8
DG
8
D
G
9
n
9
DG
9
D
A
10
n
10
DA
10
D
A
11
n
11
DA
11
D
G
12
n
12
DG
12
D
T
13
n
13
DT
13
D
A
14
n
14
DA
14
D
BRO
15
n
15
CBR
15
D
A
16
n
16
DA
16
D
C
17
n
17
DC
17
D
BRO
18
n
18
CBR
18
D
G
19
n
19
DG
19
D
G
20
n
20
DG
20
D
A
21
n
21
DA
21
D
T
22
n
1
DT
22
E
T
23
n
2
DT
23
E
C
24
n
3
DC
24
E
C
25
n
4
DC
25
E
G
26
n
5
DG
26
E
G
27
n
6
DG
27
E
+U
28
n
7
BRU
28
E
G
29
n
8
DG
29
E
+U
30
n
9
BRU
30
E
A
31
n
10
DA
31
E
C
32
n
11
DC
32
E
T
33
n
12
DT
33
E
T
34
n
13
DT
34
E
C
35
n
14
DC
35
E
C
36
n
15
DC
36
E
G
37
n
16
DG
37
E
G
38
n
17
DG
38
E
T
39
n
18
DT
39
E
C
40
n
19
DC
40
E
A
41
n
20
DA
41
E
T
42
n
21
DT
42
E
ILE
320
n
1
ILE
320
A
GLN
321
n
2
GLN
321
A
LEU
322
n
3
LEU
322
A
TRP
323
n
4
TRP
323
A
GLN
324
n
5
GLN
324
A
PHE
325
n
6
PHE
325
A
LEU
326
n
7
LEU
326
A
LEU
327
n
8
LEU
327
A
GLU
328
n
9
GLU
328
A
LEU
329
n
10
LEU
329
A
LEU
330
n
11
LEU
330
A
THR
331
n
12
THR
331
A
ASP
332
n
13
ASP
332
A
LYS
333
n
14
LYS
333
A
ASP
334
n
15
ASP
334
A
ALA
335
n
16
ALA
335
A
ARG
336
n
17
ARG
336
A
ASP
337
n
18
ASP
337
A
CYS
338
n
19
CYS
338
A
ILE
339
n
20
ILE
339
A
SER
340
n
21
SER
340
A
TRP
341
n
22
TRP
341
A
VAL
342
n
23
VAL
342
A
GLY
343
n
24
GLY
343
A
ASP
344
n
25
ASP
344
A
GLU
345
n
26
GLU
345
A
GLY
346
n
27
GLY
346
A
GLU
347
n
28
GLU
347
A
PHE
348
n
29
PHE
348
A
LYS
349
n
30
LYS
349
A
LEU
350
n
31
LEU
350
A
ASN
351
n
32
ASN
351
A
GLN
352
n
33
GLN
352
A
PRO
353
n
34
PRO
353
A
GLU
354
n
35
GLU
354
A
LEU
355
n
36
LEU
355
A
VAL
356
n
37
VAL
356
A
ALA
357
n
38
ALA
357
A
GLN
358
n
39
GLN
358
A
LYS
359
n
40
LYS
359
A
TRP
360
n
41
TRP
360
A
GLY
361
n
42
GLY
361
A
GLN
362
n
43
GLN
362
A
ARG
363
n
44
ARG
363
A
LYS
364
n
45
LYS
364
A
ASN
365
n
46
ASN
365
A
LYS
366
n
47
LYS
366
A
PRO
367
n
48
PRO
367
A
THR
368
n
49
THR
368
A
MET
369
n
50
MET
369
A
ASN
370
n
51
ASN
370
A
TYR
371
n
52
TYR
371
A
GLU
372
n
53
GLU
372
A
LYS
373
n
54
LYS
373
A
LEU
374
n
55
LEU
374
A
SER
375
n
56
SER
375
A
ARG
376
n
57
ARG
376
A
ALA
377
n
58
ALA
377
A
LEU
378
n
59
LEU
378
A
ARG
379
n
60
ARG
379
A
TYR
380
n
61
TYR
380
A
TYR
381
n
62
TYR
381
A
TYR
382
n
63
TYR
382
A
ASP
383
n
64
ASP
383
A
GLY
384
n
65
GLY
384
A
ASP
385
n
66
ASP
385
A
MET
386
n
67
MET
386
A
ILE
387
n
68
ILE
387
A
CYS
388
n
69
CYS
388
A
LYS
389
n
70
LYS
389
A
VAL
390
n
71
VAL
390
A
GLN
391
n
72
GLN
391
A
GLY
392
n
73
GLY
392
A
LYS
393
n
74
LYS
393
A
ARG
394
n
75
ARG
394
A
PHE
395
n
76
PHE
395
A
VAL
396
n
77
VAL
396
A
TYR
397
n
78
TYR
397
A
LYS
398
n
79
LYS
398
A
PHE
399
n
80
PHE
399
A
VAL
400
n
81
VAL
400
A
CYS
401
n
82
CYS
401
A
ASP
402
n
83
ASP
402
A
LEU
403
n
84
LEU
403
A
LYS
404
n
85
LYS
404
A
THR
405
n
86
THR
405
A
LEU
406
n
87
LEU
406
A
ILE
407
n
88
ILE
407
A
GLY
408
n
89
GLY
408
A
TYR
409
n
90
TYR
409
A
SER
410
n
91
SER
410
A
ALA
411
n
92
ALA
411
A
ALA
412
n
93
ALA
412
A
GLU
413
n
94
GLU
413
A
LEU
414
n
95
LEU
414
A
ASN
415
n
96
ASN
415
A
ARG
416
n
97
ARG
416
A
LEU
417
n
98
LEU
417
A
VAL
418
n
99
VAL
418
A
ILE
419
n
100
ILE
419
A
GLU
420
n
101
GLU
420
A
CYS
421
n
102
CYS
421
A
GLU
422
n
103
GLU
422
A
GLN
423
n
104
GLN
423
A
LYS
424
n
105
LYS
424
A
LYS
425
n
106
LYS
425
A
LEU
426
n
107
LEU
426
A
ALA
427
n
108
ALA
427
A
ARG
428
n
109
ARG
428
A
MET
429
n
110
MET
429
A
ASP
5
n
1
ASP
5
B
LEU
6
n
2
LEU
6
B
GLY
7
n
3
GLY
7
B
LYS
8
n
4
LYS
8
B
LYS
9
n
5
LYS
9
B
LEU
10
n
6
LEU
10
B
LEU
11
n
7
LEU
11
B
GLU
12
n
8
GLU
12
B
ALA
13
n
9
ALA
13
B
ALA
14
n
10
ALA
14
B
ARG
15
n
11
ARG
15
B
ALA
16
n
12
ALA
16
B
GLY
17
n
13
GLY
17
B
GLN
18
n
14
GLN
18
B
ASP
19
n
15
ASP
19
B
ASP
20
n
16
ASP
20
B
GLU
21
n
17
GLU
21
B
VAL
22
n
18
VAL
22
B
ARG
23
n
19
ARG
23
B
ILE
24
n
20
ILE
24
B
LEU
25
n
21
LEU
25
B
MET
26
n
22
MET
26
B
ALA
27
n
23
ALA
27
B
ASN
28
n
24
ASN
28
B
GLY
29
n
25
GLY
29
B
ALA
30
n
26
ALA
30
B
PRO
31
n
27
PRO
31
B
PHE
32
n
28
PHE
32
B
THR
33
n
29
THR
33
B
THR
34
n
30
THR
34
B
ASP
35
n
31
ASP
35
B
TRP
36
n
32
TRP
36
B
LEU
37
n
33
LEU
37
B
GLY
38
n
34
GLY
38
B
THR
39
n
35
THR
39
B
SER
40
n
36
SER
40
B
PRO
41
n
37
PRO
41
B
LEU
42
n
38
LEU
42
B
HIS
43
n
39
HIS
43
B
LEU
44
n
40
LEU
44
B
ALA
45
n
41
ALA
45
B
ALA
46
n
42
ALA
46
B
GLN
47
n
43
GLN
47
B
TYR
48
n
44
TYR
48
B
GLY
49
n
45
GLY
49
B
HIS
50
n
46
HIS
50
B
PHE
51
n
47
PHE
51
B
SER
52
n
48
SER
52
B
THR
53
n
49
THR
53
B
THR
54
n
50
THR
54
B
GLU
55
n
51
GLU
55
B
VAL
56
n
52
VAL
56
B
LEU
57
n
53
LEU
57
B
LEU
58
n
54
LEU
58
B
ARG
59
n
55
ARG
59
B
ALA
60
n
56
ALA
60
B
GLY
61
n
57
GLY
61
B
VAL
62
n
58
VAL
62
B
SER
63
n
59
SER
63
B
ARG
64
n
60
ARG
64
B
ASP
65
n
61
ASP
65
B
ALA
66
n
62
ALA
66
B
ARG
67
n
63
ARG
67
B
THR
68
n
64
THR
68
B
LYS
69
n
65
LYS
69
B
VAL
70
n
66
VAL
70
B
ASP
71
n
67
ASP
71
B
ARG
72
n
68
ARG
72
B
THR
73
n
69
THR
73
B
PRO
74
n
70
PRO
74
B
LEU
75
n
71
LEU
75
B
HIS
76
n
72
HIS
76
B
MET
77
n
73
MET
77
B
ALA
78
n
74
ALA
78
B
ALA
79
n
75
ALA
79
B
SER
80
n
76
SER
80
B
GLU
81
n
77
GLU
81
B
GLY
82
n
78
GLY
82
B
HIS
83
n
79
HIS
83
B
ALA
84
n
80
ALA
84
B
ASN
85
n
81
ASN
85
B
ILE
86
n
82
ILE
86
B
VAL
87
n
83
VAL
87
B
GLU
88
n
84
GLU
88
B
VAL
89
n
85
VAL
89
B
LEU
90
n
86
LEU
90
B
LEU
91
n
87
LEU
91
B
LYS
92
n
88
LYS
92
B
HIS
93
n
89
HIS
93
B
GLY
94
n
90
GLY
94
B
ALA
95
n
91
ALA
95
B
ASP
96
n
92
ASP
96
B
VAL
97
n
93
VAL
97
B
ASN
98
n
94
ASN
98
B
ALA
99
n
95
ALA
99
B
LYS
100
n
96
LYS
100
B
ASP
101
n
97
ASP
101
B
MET
102
n
98
MET
102
B
LEU
103
n
99
LEU
103
B
LYS
104
n
100
LYS
104
B
MET
105
n
101
MET
105
B
THR
106
n
102
THR
106
B
ALA
107
n
103
ALA
107
B
LEU
108
n
104
LEU
108
B
HIS
109
n
105
HIS
109
B
TRP
110
n
106
TRP
110
B
ALA
111
n
107
ALA
111
B
THR
112
n
108
THR
112
B
GLU
113
n
109
GLU
113
B
HIS
114
n
110
HIS
114
B
ASN
115
n
111
ASN
115
B
HIS
116
n
112
HIS
116
B
GLN
117
n
113
GLN
117
B
GLU
118
n
114
GLU
118
B
VAL
119
n
115
VAL
119
B
VAL
120
n
116
VAL
120
B
GLU
121
n
117
GLU
121
B
LEU
122
n
118
LEU
122
B
LEU
123
n
119
LEU
123
B
ILE
124
n
120
ILE
124
B
LYS
125
n
121
LYS
125
B
TYR
126
n
122
TYR
126
B
GLY
127
n
123
GLY
127
B
ALA
128
n
124
ALA
128
B
ASP
129
n
125
ASP
129
B
VAL
130
n
126
VAL
130
B
HIS
131
n
127
HIS
131
B
THR
132
n
128
THR
132
B
GLN
133
n
129
GLN
133
B
SER
134
n
130
SER
134
B
LYS
135
n
131
LYS
135
B
PHE
136
n
132
PHE
136
B
CYS
137
n
133
CYS
137
B
LYS
138
n
134
LYS
138
B
THR
139
n
135
THR
139
B
ALA
140
n
136
ALA
140
B
PHE
141
n
137
PHE
141
B
ASP
142
n
138
ASP
142
B
ILE
143
n
139
ILE
143
B
SER
144
n
140
SER
144
B
ILE
145
n
141
ILE
145
B
ASP
146
n
142
ASP
146
B
ASN
147
n
143
ASN
147
B
GLY
148
n
144
GLY
148
B
ASN
149
n
145
ASN
149
B
GLU
150
n
146
GLU
150
B
ASP
151
n
147
ASP
151
B
LEU
152
n
148
LEU
152
B
ALA
153
n
149
ALA
153
B
GLU
154
n
150
GLU
154
B
ILE
155
n
151
ILE
155
B
LEU
156
n
152
LEU
156
B
GLN
157
n
153
GLN
157
B
author_defined_assembly
4
tetrameric
D
BRU
3
A
BRU
3
DU
D
CBR
15
A
CBR
15
DC
D
CBR
18
A
CBR
18
DC
E
BRU
28
B
BRU
7
DU
E
BRU
30
B
BRU
9
DU
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
SER
340
C
O
SER
21
A
N
LYS
349
C
N
LYS
30
A
O
PHE
348
C
O
PHE
29
A
N
TYR
397
C
N
TYR
78
A
N
LYS
398
C
N
LYS
79
A
O
CYS
388
C
O
CYS
69
1
A
CG
LYS
366
C
CG
LYS
47
1
Y
1
A
CD
LYS
366
C
CD
LYS
47
1
Y
1
A
CE
LYS
366
C
CE
LYS
47
1
Y
1
A
NZ
LYS
366
C
NZ
LYS
47
1
Y
1
A
CG
GLU
372
C
CG
GLU
53
1
Y
1
A
CD
GLU
372
C
CD
GLU
53
1
Y
1
A
OE1
GLU
372
C
OE1
GLU
53
1
Y
1
A
OE2
GLU
372
C
OE2
GLU
53
1
Y
1
B
CG
ASP
5
D
CG
ASP
1
1
Y
1
B
OD1
ASP
5
D
OD1
ASP
1
1
Y
1
B
OD2
ASP
5
D
OD2
ASP
1
1
Y
1
B
CG
LEU
6
D
CG
LEU
2
1
Y
1
B
CD1
LEU
6
D
CD1
LEU
2
1
Y
1
B
CD2
LEU
6
D
CD2
LEU
2
1
Y
1
B
CG
LYS
9
D
CG
LYS
5
1
Y
1
B
CD
LYS
9
D
CD
LYS
5
1
Y
1
B
CE
LYS
9
D
CE
LYS
5
1
Y
1
B
NZ
LYS
9
D
NZ
LYS
5
1
Y
1
B
CG
ARG
15
D
CG
ARG
11
1
Y
1
B
CD
ARG
15
D
CD
ARG
11
1
Y
1
B
NE
ARG
15
D
NE
ARG
11
1
Y
1
B
CZ
ARG
15
D
CZ
ARG
11
1
Y
1
B
NH1
ARG
15
D
NH1
ARG
11
1
Y
1
B
NH2
ARG
15
D
NH2
ARG
11
1
Y
1
B
CG
ARG
64
D
CG
ARG
60
1
Y
1
B
CD
ARG
64
D
CD
ARG
60
1
Y
1
B
NE
ARG
64
D
NE
ARG
60
1
Y
1
B
CZ
ARG
64
D
CZ
ARG
60
1
Y
1
B
NH1
ARG
64
D
NH1
ARG
60
1
Y
1
B
NH2
ARG
64
D
NH2
ARG
60
1
Y
1
B
CG
GLU
150
D
CG
GLU
146
1
Y
1
B
CD
GLU
150
D
CD
GLU
146
1
Y
1
B
OE1
GLU
150
D
OE1
GLU
146
1
Y
1
B
OE2
GLU
150
D
OE2
GLU
146
1
Y
1
A
PHE
395
59.61
15.65
1
B
GLN
18
-102.30
78.09
1
B
THR
33
-110.06
-166.03
1
B
ASP
65
-99.87
50.29
1
B
TYR
126
-82.93
38.19
PARHCSDX.PRO
TOPHCSDX.PRO
TOM_BR_RNA-DNA.PARM
TOM_BR_RNA-DNA.TOP
PARAM19_MOD.SOL
TOPH19.SOL
35.30
-3.680
0.0000
-4.440
-0.800
0.0000
9.2690
0.282
0.700
0.211
2.150
6.000
1714
17217
10.000
88.000
RANDOM
100000.000
0.1000
1
RESTRAINED
THROUGHOUT
MIR
0.32
0.27
2.150
6.000
46
2966
5
852
2063
0.007
1.17
19.9
1.22
0.291
0.02
0.282
2.22
152
1477
10
10.00
69.80
2.150
30.000
1AWC
18368
1.500
0.072
1
21.0000
8.700
88.000
2.150
2.230
5.300
0.22
7.900
88.00
phasing
MLPHARE
refinement
X-PLOR
3.8
data reduction
DENZO
data scaling
SCALEPACK
MOUSE GABP ALPHA/BETA DOMAIN BOUND TO DNA
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
A
LEU
322
C
LEU
3
HELX_P
A
THR
331
C
THR
12
1
1
10
A
PRO
353
C
PRO
34
HELX_P
A
LYS
364
C
LYS
45
1
2
12
A
TYR
371
C
TYR
52
HELX_P
A
ASP
383
C
ASP
64
1
3
13
A
LEU
403
C
LEU
84
HELX_P
A
LEU
406
C
LEU
87
1
4
4
A
ALA
411
C
ALA
92
HELX_P
A
ALA
427
C
ALA
108
1
5
17
B
LEU
6
D
LEU
2
HELX_P
B
ALA
16
D
ALA
12
1
6
11
B
ASP
19
D
ASP
15
HELX_P
B
ASN
28
D
ASN
24
1
7
10
B
PRO
41
D
PRO
37
HELX_P
B
TYR
48
D
TYR
44
1
8
8
B
PHE
51
D
PHE
47
HELX_P
B
ALA
60
D
ALA
56
1
9
10
B
PRO
74
D
PRO
70
HELX_P
B
GLU
81
D
GLU
77
1
10
8
B
ALA
84
D
ALA
80
HELX_P
B
HIS
93
D
HIS
89
1
11
10
B
ALA
107
D
ALA
103
HELX_P
B
GLU
113
D
GLU
109
1
12
7
B
GLN
117
D
GLN
113
HELX_P
B
LYS
125
D
LYS
121
1
13
9
B
ALA
140
D
ALA
136
HELX_P
B
ASP
146
D
ASP
142
1
14
7
B
GLU
150
D
GLU
146
HELX_P
B
ILE
155
D
ILE
151
1
15
6
covale
1.596
both
D
DA
2
A
O3'
DA
2
1_555
D
BRU
3
A
P
BRU
3
1_555
covale
1.600
both
D
BRU
3
A
O3'
BRU
3
1_555
D
DG
4
A
P
DG
4
1_555
covale
1.608
both
D
DA
14
A
O3'
DA
14
1_555
D
CBR
15
A
P
CBR
15
1_555
covale
1.600
both
D
CBR
15
A
O3'
CBR
15
1_555
D
DA
16
A
P
DA
16
1_555
covale
1.600
both
D
DC
17
A
O3'
DC
17
1_555
D
CBR
18
A
P
CBR
18
1_555
covale
1.601
both
D
CBR
18
A
O3'
CBR
18
1_555
D
DG
19
A
P
DG
19
1_555
covale
1.604
both
E
DG
27
B
O3'
DG
6
1_555
E
BRU
28
B
P
BRU
7
1_555
covale
1.605
both
E
BRU
28
B
O3'
BRU
7
1_555
E
DG
29
B
P
DG
8
1_555
covale
1.597
both
E
DG
29
B
O3'
DG
8
1_555
E
BRU
30
B
P
BRU
9
1_555
covale
1.594
both
E
BRU
30
B
O3'
BRU
9
1_555
E
DA
31
B
P
DA
10
1_555
hydrog
WATSON-CRICK
D
DA
2
A
N1
DA
2
1_555
E
DT
42
B
N3
DT
21
1_555
hydrog
WATSON-CRICK
D
DA
2
A
N6
DA
2
1_555
E
DT
42
B
O4
DT
21
1_555
hydrog
WATSON-CRICK
D
BRU
3
A
N3
BRU
3
1_555
E
DA
41
B
N1
DA
20
1_555
hydrog
WATSON-CRICK
D
BRU
3
A
O4
BRU
3
1_555
E
DA
41
B
N6
DA
20
1_555
hydrog
WATSON-CRICK
D
DG
4
A
N1
DG
4
1_555
E
DC
40
B
N3
DC
19
1_555
hydrog
WATSON-CRICK
D
DG
4
A
N2
DG
4
1_555
E
DC
40
B
O2
DC
19
1_555
hydrog
WATSON-CRICK
D
DG
4
A
O6
DG
4
1_555
E
DC
40
B
N4
DC
19
1_555
hydrog
WATSON-CRICK
D
DA
5
A
N1
DA
5
1_555
E
DT
39
B
N3
DT
18
1_555
hydrog
WATSON-CRICK
D
DA
5
A
N6
DA
5
1_555
E
DT
39
B
O4
DT
18
1_555
hydrog
WATSON-CRICK
D
DC
6
A
N3
DC
6
1_555
E
DG
38
B
N1
DG
17
1_555
hydrog
WATSON-CRICK
D
DC
6
A
N4
DC
6
1_555
E
DG
38
B
O6
DG
17
1_555
hydrog
WATSON-CRICK
D
DC
6
A
O2
DC
6
1_555
E
DG
38
B
N2
DG
17
1_555
hydrog
WATSON-CRICK
D
DC
7
A
N3
DC
7
1_555
E
DG
37
B
N1
DG
16
1_555
hydrog
WATSON-CRICK
D
DC
7
A
N4
DC
7
1_555
E
DG
37
B
O6
DG
16
1_555
hydrog
WATSON-CRICK
D
DC
7
A
O2
DC
7
1_555
E
DG
37
B
N2
DG
16
1_555
hydrog
WATSON-CRICK
D
DG
8
A
N1
DG
8
1_555
E
DC
36
B
N3
DC
15
1_555
hydrog
WATSON-CRICK
D
DG
8
A
N2
DG
8
1_555
E
DC
36
B
O2
DC
15
1_555
hydrog
WATSON-CRICK
D
DG
8
A
O6
DG
8
1_555
E
DC
36
B
N4
DC
15
1_555
hydrog
WATSON-CRICK
D
DG
9
A
N1
DG
9
1_555
E
DC
35
B
N3
DC
14
1_555
hydrog
WATSON-CRICK
D
DG
9
A
N2
DG
9
1_555
E
DC
35
B
O2
DC
14
1_555
hydrog
WATSON-CRICK
D
DG
9
A
O6
DG
9
1_555
E
DC
35
B
N4
DC
14
1_555
hydrog
WATSON-CRICK
D
DA
10
A
N1
DA
10
1_555
E
DT
34
B
N3
DT
13
1_555
hydrog
WATSON-CRICK
D
DA
10
A
N6
DA
10
1_555
E
DT
34
B
O4
DT
13
1_555
hydrog
WATSON-CRICK
D
DA
11
A
N1
DA
11
1_555
E
DT
33
B
N3
DT
12
1_555
hydrog
WATSON-CRICK
D
DA
11
A
N6
DA
11
1_555
E
DT
33
B
O4
DT
12
1_555
hydrog
WATSON-CRICK
D
DG
12
A
N1
DG
12
1_555
E
DC
32
B
N3
DC
11
1_555
hydrog
WATSON-CRICK
D
DG
12
A
N2
DG
12
1_555
E
DC
32
B
O2
DC
11
1_555
hydrog
WATSON-CRICK
D
DG
12
A
O6
DG
12
1_555
E
DC
32
B
N4
DC
11
1_555
hydrog
WATSON-CRICK
D
DT
13
A
N3
DT
13
1_555
E
DA
31
B
N1
DA
10
1_555
hydrog
WATSON-CRICK
D
DT
13
A
O4
DT
13
1_555
E
DA
31
B
N6
DA
10
1_555
hydrog
WATSON-CRICK
D
DA
14
A
N1
DA
14
1_555
E
BRU
30
B
N3
BRU
9
1_555
hydrog
WATSON-CRICK
D
DA
14
A
N6
DA
14
1_555
E
BRU
30
B
O4
BRU
9
1_555
hydrog
WATSON-CRICK
D
CBR
15
A
N3
CBR
15
1_555
E
DG
29
B
N1
DG
8
1_555
hydrog
WATSON-CRICK
D
CBR
15
A
N4
CBR
15
1_555
E
DG
29
B
O6
DG
8
1_555
hydrog
WATSON-CRICK
D
CBR
15
A
O2
CBR
15
1_555
E
DG
29
B
N2
DG
8
1_555
hydrog
WATSON-CRICK
D
DA
16
A
N1
DA
16
1_555
E
BRU
28
B
N3
BRU
7
1_555
hydrog
WATSON-CRICK
D
DA
16
A
N6
DA
16
1_555
E
BRU
28
B
O4
BRU
7
1_555
hydrog
WATSON-CRICK
D
DC
17
A
N3
DC
17
1_555
E
DG
27
B
N1
DG
6
1_555
hydrog
WATSON-CRICK
D
DC
17
A
N4
DC
17
1_555
E
DG
27
B
O6
DG
6
1_555
hydrog
WATSON-CRICK
D
DC
17
A
O2
DC
17
1_555
E
DG
27
B
N2
DG
6
1_555
hydrog
WATSON-CRICK
D
CBR
18
A
N3
CBR
18
1_555
E
DG
26
B
N1
DG
5
1_555
hydrog
WATSON-CRICK
D
CBR
18
A
N4
CBR
18
1_555
E
DG
26
B
O6
DG
5
1_555
hydrog
WATSON-CRICK
D
CBR
18
A
O2
CBR
18
1_555
E
DG
26
B
N2
DG
5
1_555
hydrog
WATSON-CRICK
D
DG
19
A
N1
DG
19
1_555
E
DC
25
B
N3
DC
4
1_555
hydrog
WATSON-CRICK
D
DG
19
A
N2
DG
19
1_555
E
DC
25
B
O2
DC
4
1_555
hydrog
WATSON-CRICK
D
DG
19
A
O6
DG
19
1_555
E
DC
25
B
N4
DC
4
1_555
hydrog
WATSON-CRICK
D
DG
20
A
N1
DG
20
1_555
E
DC
24
B
N3
DC
3
1_555
hydrog
WATSON-CRICK
D
DG
20
A
N2
DG
20
1_555
E
DC
24
B
O2
DC
3
1_555
hydrog
WATSON-CRICK
D
DG
20
A
O6
DG
20
1_555
E
DC
24
B
N4
DC
3
1_555
hydrog
WATSON-CRICK
D
DA
21
A
N1
DA
21
1_555
E
DT
23
B
N3
DT
2
1_555
hydrog
WATSON-CRICK
D
DA
21
A
N6
DA
21
1_555
E
DT
23
B
O4
DT
2
1_555
TRANSCRIPTION/DNA
COMPLEX (TRANSCRIPTION REGULATION-DNA), DNA-BINDING, NUCLEAR PROTEIN, ETS DOMAIN, ANKYRIN REPEATS, TRANSCRIPTION FACTOR, TRANSCRIPTION-DNA COMPLEX
GABPA_MOUSE
UNP
3
Q00422
GABP2_MOUSE
UNP
4
Q00420
1AWC
PDB
1
1AWC
1AWC
PDB
2
1AWC
320
429
1AWC
320
429
Q00422
A
1
1
110
5
157
1AWC
5
157
Q00420
B
2
1
153
1
21
1AWC
1
21
1AWC
D
3
1
21
22
42
1AWC
22
42
1AWC
E
4
1
21
4
anti-parallel
anti-parallel
anti-parallel
A
SER
340
C
SER
21
A
TRP
341
C
TRP
22
A
GLU
347
C
GLU
28
A
LYS
349
C
LYS
30
A
VAL
396
C
VAL
77
A
PHE
399
C
PHE
80
A
ILE
387
C
ILE
68
A
LYS
389
C
LYS
70
5
monoclinic
C 1 2 1