0.021911
0.000000
0.000000
0.000000
0.014047
0.000000
0.000000
0.000000
0.013554
0.00000
0.00000
0.00000
Wang, X.
Zhang, X.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
45.640
71.190
73.780
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C34 H32 Fe N4 O4
616.487
PROTOPORPHYRIN IX CONTAINING FE
HEME
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
37
1485
1494
10.1021/bi972390g
9484218
The reduction potential of cytochrome b5 is modulated by its exposed heme edge.
1998
10.2210/pdb1awp/pdb
pdb_00001awp
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293
1
AREA DETECTOR
1997-06
SIEMENS
CRYSTAL
M
x-ray
1
1.5418
1.0
1.5418
10419.405
CYTOCHROME B5
WATER SOLUBLE DOMAIN
V45L, V61L
2
man
polymer
616.487
PROTOPORPHYRIN IX CONTAINING FE
2
syn
non-polymer
18.015
water
103
nat
water
no
no
DGQGSDPAVTYYRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEELLLEQAGADATESFEDLGHSPDAREMLKQYY
IGDVHPNDLKPK
DGQGSDPAVTYYRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEELLLEQAGADATESFEDLGHSPDAREMLKQYY
IGDVHPNDLKPK
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Norway rat
Rattus
Escherichia
Escherichia coli
sample
HEPATOCYTE
BL21
OUTER MITOCHONDRIAL MEMBRANE
POTENTIAL
10116
LIVER
MITOCHONDRION
Rattus norvegicus
PERIPLASMIC SPACE
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
PLASMID
PET 11A
1
2.7
54
database_2
pdbx_database_status
struct_conn
struct_ref_seq_dif
struct_site
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Other
Refinement description
1
0
1998-10-28
1
1
2008-03-24
1
2
2011-07-13
1
3
2021-11-03
1
4
2023-08-02
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1997-10-03
REL
HEM
PROTOPORPHYRIN IX CONTAINING FE
HOH
water
1B5M
PDB ENTRY 1B5M
PDB
experimental model
HEM
201
2
HEM
HEM
201
A
HEM
201
2
HEM
HEM
201
B
HOH
1
3
HOH
HOH
202
A
HOH
2
3
HOH
HOH
203
A
HOH
4
3
HOH
HOH
204
A
HOH
7
3
HOH
HOH
205
A
HOH
8
3
HOH
HOH
206
A
HOH
12
3
HOH
HOH
207
A
HOH
16
3
HOH
HOH
208
A
HOH
20
3
HOH
HOH
209
A
HOH
21
3
HOH
HOH
210
A
HOH
24
3
HOH
HOH
211
A
HOH
26
3
HOH
HOH
212
A
HOH
29
3
HOH
HOH
213
A
HOH
31
3
HOH
HOH
214
A
HOH
32
3
HOH
HOH
215
A
HOH
33
3
HOH
HOH
216
A
HOH
36
3
HOH
HOH
217
A
HOH
37
3
HOH
HOH
218
A
HOH
39
3
HOH
HOH
219
A
HOH
40
3
HOH
HOH
220
A
HOH
41
3
HOH
HOH
221
A
HOH
42
3
HOH
HOH
222
A
HOH
44
3
HOH
HOH
223
A
HOH
45
3
HOH
HOH
224
A
HOH
49
3
HOH
HOH
225
A
HOH
50
3
HOH
HOH
226
A
HOH
55
3
HOH
HOH
227
A
HOH
58
3
HOH
HOH
228
A
HOH
59
3
HOH
HOH
229
A
HOH
63
3
HOH
HOH
230
A
HOH
65
3
HOH
HOH
231
A
HOH
66
3
HOH
HOH
232
A
HOH
69
3
HOH
HOH
233
A
HOH
70
3
HOH
HOH
234
A
HOH
71
3
HOH
HOH
235
A
HOH
73
3
HOH
HOH
236
A
HOH
77
3
HOH
HOH
237
A
HOH
84
3
HOH
HOH
238
A
HOH
85
3
HOH
HOH
239
A
HOH
86
3
HOH
HOH
240
A
HOH
87
3
HOH
HOH
241
A
HOH
88
3
HOH
HOH
242
A
HOH
89
3
HOH
HOH
243
A
HOH
91
3
HOH
HOH
244
A
HOH
92
3
HOH
HOH
245
A
HOH
93
3
HOH
HOH
246
A
HOH
95
3
HOH
HOH
247
A
HOH
96
3
HOH
HOH
248
A
HOH
97
3
HOH
HOH
249
A
HOH
102
3
HOH
HOH
250
A
HOH
103
3
HOH
HOH
251
A
HOH
3
3
HOH
HOH
202
B
HOH
5
3
HOH
HOH
203
B
HOH
6
3
HOH
HOH
204
B
HOH
9
3
HOH
HOH
205
B
HOH
10
3
HOH
HOH
206
B
HOH
11
3
HOH
HOH
207
B
HOH
13
3
HOH
HOH
208
B
HOH
14
3
HOH
HOH
209
B
HOH
15
3
HOH
HOH
210
B
HOH
17
3
HOH
HOH
211
B
HOH
18
3
HOH
HOH
212
B
HOH
19
3
HOH
HOH
213
B
HOH
22
3
HOH
HOH
214
B
HOH
23
3
HOH
HOH
215
B
HOH
25
3
HOH
HOH
216
B
HOH
27
3
HOH
HOH
217
B
HOH
28
3
HOH
HOH
218
B
HOH
30
3
HOH
HOH
219
B
HOH
34
3
HOH
HOH
220
B
HOH
35
3
HOH
HOH
221
B
HOH
38
3
HOH
HOH
222
B
HOH
43
3
HOH
HOH
223
B
HOH
46
3
HOH
HOH
224
B
HOH
47
3
HOH
HOH
225
B
HOH
48
3
HOH
HOH
226
B
HOH
51
3
HOH
HOH
227
B
HOH
52
3
HOH
HOH
228
B
HOH
53
3
HOH
HOH
229
B
HOH
54
3
HOH
HOH
230
B
HOH
56
3
HOH
HOH
231
B
HOH
57
3
HOH
HOH
232
B
HOH
60
3
HOH
HOH
233
B
HOH
61
3
HOH
HOH
234
B
HOH
62
3
HOH
HOH
235
B
HOH
64
3
HOH
HOH
236
B
HOH
67
3
HOH
HOH
237
B
HOH
68
3
HOH
HOH
238
B
HOH
72
3
HOH
HOH
239
B
HOH
74
3
HOH
HOH
240
B
HOH
75
3
HOH
HOH
241
B
HOH
76
3
HOH
HOH
242
B
HOH
78
3
HOH
HOH
243
B
HOH
79
3
HOH
HOH
244
B
HOH
80
3
HOH
HOH
245
B
HOH
81
3
HOH
HOH
246
B
HOH
82
3
HOH
HOH
247
B
HOH
83
3
HOH
HOH
248
B
HOH
90
3
HOH
HOH
249
B
HOH
94
3
HOH
HOH
250
B
HOH
98
3
HOH
HOH
251
B
HOH
99
3
HOH
HOH
252
B
HOH
100
3
HOH
HOH
253
B
HOH
101
3
HOH
HOH
254
B
n
1
-4
A
n
2
-3
A
n
3
-2
A
n
4
-1
A
n
5
0
A
ASP
1
n
6
ASP
1
A
PRO
2
n
7
PRO
2
A
ALA
3
n
8
ALA
3
A
VAL
4
n
9
VAL
4
A
THR
5
n
10
THR
5
A
TYR
6
n
11
TYR
6
A
TYR
7
n
12
TYR
7
A
ARG
8
n
13
ARG
8
A
LEU
9
n
14
LEU
9
A
GLU
10
n
15
GLU
10
A
GLU
11
n
16
GLU
11
A
VAL
12
n
17
VAL
12
A
ALA
13
n
18
ALA
13
A
LYS
14
n
19
LYS
14
A
ARG
15
n
20
ARG
15
A
ASN
16
n
21
ASN
16
A
THR
17
n
22
THR
17
A
ALA
18
n
23
ALA
18
A
GLU
19
n
24
GLU
19
A
GLU
20
n
25
GLU
20
A
THR
21
n
26
THR
21
A
TRP
22
n
27
TRP
22
A
MET
23
n
28
MET
23
A
VAL
24
n
29
VAL
24
A
ILE
25
n
30
ILE
25
A
HIS
26
n
31
HIS
26
A
GLY
27
n
32
GLY
27
A
ARG
28
n
33
ARG
28
A
VAL
29
n
34
VAL
29
A
TYR
30
n
35
TYR
30
A
ASP
31
n
36
ASP
31
A
ILE
32
n
37
ILE
32
A
THR
33
n
38
THR
33
A
ARG
34
n
39
ARG
34
A
PHE
35
n
40
PHE
35
A
LEU
36
n
41
LEU
36
A
SER
37
n
42
SER
37
A
GLU
38
n
43
GLU
38
A
HIS
39
n
44
HIS
39
A
PRO
40
n
45
PRO
40
A
GLY
41
n
46
GLY
41
A
GLY
42
n
47
GLY
42
A
GLU
43
n
48
GLU
43
A
GLU
44
n
49
GLU
44
A
LEU
45
n
50
LEU
45
A
LEU
46
n
51
LEU
46
A
LEU
47
n
52
LEU
47
A
GLU
48
n
53
GLU
48
A
GLN
49
n
54
GLN
49
A
ALA
50
n
55
ALA
50
A
GLY
51
n
56
GLY
51
A
ALA
52
n
57
ALA
52
A
ASP
53
n
58
ASP
53
A
ALA
54
n
59
ALA
54
A
THR
55
n
60
THR
55
A
GLU
56
n
61
GLU
56
A
SER
57
n
62
SER
57
A
PHE
58
n
63
PHE
58
A
GLU
59
n
64
GLU
59
A
ASP
60
n
65
ASP
60
A
LEU
61
n
66
LEU
61
A
GLY
62
n
67
GLY
62
A
HIS
63
n
68
HIS
63
A
SER
64
n
69
SER
64
A
PRO
65
n
70
PRO
65
A
ASP
66
n
71
ASP
66
A
ALA
67
n
72
ALA
67
A
ARG
68
n
73
ARG
68
A
GLU
69
n
74
GLU
69
A
MET
70
n
75
MET
70
A
LEU
71
n
76
LEU
71
A
LYS
72
n
77
LYS
72
A
GLN
73
n
78
GLN
73
A
TYR
74
n
79
TYR
74
A
TYR
75
n
80
TYR
75
A
ILE
76
n
81
ILE
76
A
GLY
77
n
82
GLY
77
A
ASP
78
n
83
ASP
78
A
VAL
79
n
84
VAL
79
A
HIS
80
n
85
HIS
80
A
PRO
81
n
86
PRO
81
A
ASN
82
n
87
ASN
82
A
ASP
83
n
88
ASP
83
A
LEU
84
n
89
LEU
84
A
LYS
85
n
90
LYS
85
A
PRO
86
n
91
PRO
86
A
n
92
87
A
n
1
-4
B
n
2
-3
B
n
3
-2
B
n
4
-1
B
n
5
0
B
ASP
1
n
6
ASP
1
B
PRO
2
n
7
PRO
2
B
ALA
3
n
8
ALA
3
B
VAL
4
n
9
VAL
4
B
THR
5
n
10
THR
5
B
TYR
6
n
11
TYR
6
B
TYR
7
n
12
TYR
7
B
ARG
8
n
13
ARG
8
B
LEU
9
n
14
LEU
9
B
GLU
10
n
15
GLU
10
B
GLU
11
n
16
GLU
11
B
VAL
12
n
17
VAL
12
B
ALA
13
n
18
ALA
13
B
LYS
14
n
19
LYS
14
B
ARG
15
n
20
ARG
15
B
ASN
16
n
21
ASN
16
B
THR
17
n
22
THR
17
B
ALA
18
n
23
ALA
18
B
GLU
19
n
24
GLU
19
B
GLU
20
n
25
GLU
20
B
THR
21
n
26
THR
21
B
TRP
22
n
27
TRP
22
B
MET
23
n
28
MET
23
B
VAL
24
n
29
VAL
24
B
ILE
25
n
30
ILE
25
B
HIS
26
n
31
HIS
26
B
GLY
27
n
32
GLY
27
B
ARG
28
n
33
ARG
28
B
VAL
29
n
34
VAL
29
B
TYR
30
n
35
TYR
30
B
ASP
31
n
36
ASP
31
B
ILE
32
n
37
ILE
32
B
THR
33
n
38
THR
33
B
ARG
34
n
39
ARG
34
B
PHE
35
n
40
PHE
35
B
LEU
36
n
41
LEU
36
B
SER
37
n
42
SER
37
B
GLU
38
n
43
GLU
38
B
HIS
39
n
44
HIS
39
B
PRO
40
n
45
PRO
40
B
GLY
41
n
46
GLY
41
B
GLY
42
n
47
GLY
42
B
GLU
43
n
48
GLU
43
B
GLU
44
n
49
GLU
44
B
LEU
45
n
50
LEU
45
B
LEU
46
n
51
LEU
46
B
LEU
47
n
52
LEU
47
B
GLU
48
n
53
GLU
48
B
GLN
49
n
54
GLN
49
B
ALA
50
n
55
ALA
50
B
GLY
51
n
56
GLY
51
B
ALA
52
n
57
ALA
52
B
ASP
53
n
58
ASP
53
B
ALA
54
n
59
ALA
54
B
THR
55
n
60
THR
55
B
GLU
56
n
61
GLU
56
B
SER
57
n
62
SER
57
B
PHE
58
n
63
PHE
58
B
GLU
59
n
64
GLU
59
B
ASP
60
n
65
ASP
60
B
LEU
61
n
66
LEU
61
B
GLY
62
n
67
GLY
62
B
HIS
63
n
68
HIS
63
B
SER
64
n
69
SER
64
B
PRO
65
n
70
PRO
65
B
ASP
66
n
71
ASP
66
B
ALA
67
n
72
ALA
67
B
ARG
68
n
73
ARG
68
B
GLU
69
n
74
GLU
69
B
MET
70
n
75
MET
70
B
LEU
71
n
76
LEU
71
B
LYS
72
n
77
LYS
72
B
GLN
73
n
78
GLN
73
B
TYR
74
n
79
TYR
74
B
TYR
75
n
80
TYR
75
B
ILE
76
n
81
ILE
76
B
GLY
77
n
82
GLY
77
B
ASP
78
n
83
ASP
78
B
VAL
79
n
84
VAL
79
B
HIS
80
n
85
HIS
80
B
PRO
81
n
86
PRO
81
B
ASN
82
n
87
ASN
82
B
ASP
83
n
88
ASP
83
B
LEU
84
n
89
LEU
84
B
LYS
85
n
90
LYS
85
B
PRO
86
n
91
PRO
86
B
n
92
87
B
author_defined_assembly
2
dimeric
A
HIS
39
A
NE2
HIS
44
1_555
A
HEM
201
C
FE
HEM
1_555
A
HEM
201
C
NA
HEM
1_555
92.5
A
HIS
39
A
NE2
HIS
44
1_555
A
HEM
201
C
FE
HEM
1_555
A
HEM
201
C
NB
HEM
1_555
94.4
A
HEM
201
C
NA
HEM
1_555
A
HEM
201
C
FE
HEM
1_555
A
HEM
201
C
NB
HEM
1_555
89.9
A
HIS
39
A
NE2
HIS
44
1_555
A
HEM
201
C
FE
HEM
1_555
A
HEM
201
C
NC
HEM
1_555
88.1
A
HEM
201
C
NA
HEM
1_555
A
HEM
201
C
FE
HEM
1_555
A
HEM
201
C
NC
HEM
1_555
178.8
A
HEM
201
C
NB
HEM
1_555
A
HEM
201
C
FE
HEM
1_555
A
HEM
201
C
NC
HEM
1_555
89.1
A
HIS
39
A
NE2
HIS
44
1_555
A
HEM
201
C
FE
HEM
1_555
A
HEM
201
C
ND
HEM
1_555
84.9
A
HEM
201
C
NA
HEM
1_555
A
HEM
201
C
FE
HEM
1_555
A
HEM
201
C
ND
HEM
1_555
91.4
A
HEM
201
C
NB
HEM
1_555
A
HEM
201
C
FE
HEM
1_555
A
HEM
201
C
ND
HEM
1_555
178.5
A
HEM
201
C
NC
HEM
1_555
A
HEM
201
C
FE
HEM
1_555
A
HEM
201
C
ND
HEM
1_555
89.6
A
HIS
39
A
NE2
HIS
44
1_555
A
HEM
201
C
FE
HEM
1_555
A
HIS
63
A
NE2
HIS
68
1_555
170.6
A
HEM
201
C
NA
HEM
1_555
A
HEM
201
C
FE
HEM
1_555
A
HIS
63
A
NE2
HIS
68
1_555
94.8
A
HEM
201
C
NB
HEM
1_555
A
HEM
201
C
FE
HEM
1_555
A
HIS
63
A
NE2
HIS
68
1_555
91.6
A
HEM
201
C
NC
HEM
1_555
A
HEM
201
C
FE
HEM
1_555
A
HIS
63
A
NE2
HIS
68
1_555
84.7
A
HEM
201
C
ND
HEM
1_555
A
HEM
201
C
FE
HEM
1_555
A
HIS
63
A
NE2
HIS
68
1_555
89.0
B
HIS
39
B
NE2
HIS
44
1_555
B
HEM
201
D
FE
HEM
1_555
B
HEM
201
D
NA
HEM
1_555
90.4
B
HIS
39
B
NE2
HIS
44
1_555
B
HEM
201
D
FE
HEM
1_555
B
HEM
201
D
NB
HEM
1_555
88.3
B
HEM
201
D
NA
HEM
1_555
B
HEM
201
D
FE
HEM
1_555
B
HEM
201
D
NB
HEM
1_555
90.2
B
HIS
39
B
NE2
HIS
44
1_555
B
HEM
201
D
FE
HEM
1_555
B
HEM
201
D
NC
HEM
1_555
90.5
B
HEM
201
D
NA
HEM
1_555
B
HEM
201
D
FE
HEM
1_555
B
HEM
201
D
NC
HEM
1_555
179.0
B
HEM
201
D
NB
HEM
1_555
B
HEM
201
D
FE
HEM
1_555
B
HEM
201
D
NC
HEM
1_555
89.3
B
HIS
39
B
NE2
HIS
44
1_555
B
HEM
201
D
FE
HEM
1_555
B
HEM
201
D
ND
HEM
1_555
91.3
B
HEM
201
D
NA
HEM
1_555
B
HEM
201
D
FE
HEM
1_555
B
HEM
201
D
ND
HEM
1_555
90.9
B
HEM
201
D
NB
HEM
1_555
B
HEM
201
D
FE
HEM
1_555
B
HEM
201
D
ND
HEM
1_555
178.8
B
HEM
201
D
NC
HEM
1_555
B
HEM
201
D
FE
HEM
1_555
B
HEM
201
D
ND
HEM
1_555
89.6
B
HIS
39
B
NE2
HIS
44
1_555
B
HEM
201
D
FE
HEM
1_555
B
HIS
63
B
NE2
HIS
68
1_555
174.6
B
HEM
201
D
NA
HEM
1_555
B
HEM
201
D
FE
HEM
1_555
B
HIS
63
B
NE2
HIS
68
1_555
95.0
B
HEM
201
D
NB
HEM
1_555
B
HEM
201
D
FE
HEM
1_555
B
HIS
63
B
NE2
HIS
68
1_555
91.7
B
HEM
201
D
NC
HEM
1_555
B
HEM
201
D
FE
HEM
1_555
B
HIS
63
B
NE2
HIS
68
1_555
84.1
B
HEM
201
D
ND
HEM
1_555
B
HEM
201
D
FE
HEM
1_555
B
HIS
63
B
NE2
HIS
68
1_555
88.7
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
MET
23
A
O
MET
28
A
N
TYR
30
A
N
TYR
35
A
O
VAL
29
A
O
VAL
34
A
N
GLY
77
A
N
GLY
82
B
O
MET
23
B
O
MET
28
B
N
TYR
30
B
N
TYR
35
B
O
VAL
29
B
O
VAL
34
B
N
GLY
77
B
N
GLY
82
1
A
ASP
-4
A
ASP
1
1
Y
1
A
GLY
-3
A
GLY
2
1
Y
1
A
GLN
-2
A
GLN
3
1
Y
1
A
GLY
-1
A
GLY
4
1
Y
1
A
SER
0
A
SER
5
1
Y
1
A
LYS
87
A
LYS
92
1
Y
1
B
ASP
-4
B
ASP
1
1
Y
1
B
GLY
-3
B
GLY
2
1
Y
1
B
GLN
-2
B
GLN
3
1
Y
1
B
GLY
-1
B
GLY
4
1
Y
1
B
SER
0
B
SER
5
1
Y
1
B
LYS
87
B
LYS
92
1
Y
1
A
PRO
2
-57.89
-89.25
1
A
ALA
3
-78.54
29.07
PROTEIN_REP.PARAM
TOPHCSDX.PRO
HEM.PAR
HEM.TOP
37.3
NCS RESTRAINTS WERE USED IN INITIAL STEP OF REFINEMENT. BULK SOLVENT MODELING METHOD WAS USED.
0.2250000
0.1802000
0.1802000
2.0
8
16087
9.75
97.4
RANDOM
1000000.00
0.001
1
THROUGHOUT
0
MOLECULAR REPLACEMENT
PDB ENTRY 1B5M
0.24
8.0
2.0
8
103
1575
86
0
1386
0.007
1.156
24.20
0.565
0.3356000
0.3098000
2.09
1676
9.91
92.96
19.6
2.0
10.0
1AWP
16374
0
0.0750000
1
32.42
3.2
97.7
2.0
2.07
3.41
0.2740000
2.18
92.5
model building
X-PLOR
3.851
refinement
X-PLOR
3.851
data reduction
SAINT
data scaling
SAINT
phasing
X-PLOR
3.851
RAT OUTER MITOCHONDRIAL MEMBRANE CYTOCHROME B5
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
LEU
9
A
LEU
14
HELX_P
A
LYS
14
A
LYS
19
1
1
6
A
GLU
44
A
GLU
49
HELX_P
A
GLN
49
A
GLN
54
1
2
6
A
THR
55
A
THR
60
HELX_P
A
ASP
60
A
ASP
65
1
3
6
A
PRO
65
A
PRO
70
HELX_P
A
GLN
73
A
GLN
78
1
4
9
A
PRO
81
A
PRO
86
HELX_P
A
ASP
83
A
ASP
88
5
5
3
B
LEU
9
B
LEU
14
HELX_P
B
LYS
14
B
LYS
19
1
6
6
B
THR
33
B
THR
38
HELX_P
B
GLU
38
B
GLU
43
5
7
6
B
GLU
44
B
GLU
49
HELX_P
B
GLN
49
B
GLN
54
1
8
6
B
THR
55
B
THR
60
HELX_P
B
ASP
60
B
ASP
65
1
9
6
B
PRO
65
B
PRO
70
HELX_P
B
TYR
74
B
TYR
79
1
10
10
B
PRO
81
B
PRO
86
HELX_P
B
ASP
83
B
ASP
88
5
11
3
metalc
2.135
A
HIS
39
A
NE2
HIS
44
1_555
A
HEM
201
C
FE
HEM
1_555
metalc
2.245
A
HIS
63
A
NE2
HIS
68
1_555
A
HEM
201
C
FE
HEM
1_555
metalc
2.149
B
HIS
39
B
NE2
HIS
44
1_555
B
HEM
201
D
FE
HEM
1_555
metalc
2.245
B
HIS
63
B
NE2
HIS
68
1_555
B
HEM
201
D
FE
HEM
1_555
ELECTRON TRANSPORT
CYTOCHROME, ELECTRON TRANSPORT, HEME
given
-0.548130
0.599700
0.583020
-0.834430
-0.439820
-0.332090
0.057270
-0.668520
0.741490
-9.96452
88.53668
11.72105
CYM5_RAT
UNP
1
1
P04166
MATPEASGSGRNGQGSDPAVTYYRLEEVAKRNTAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHS
PDAREMLKQYYIGDVHPNDLKPKDGDKDPSKNNSCQSSWAYWIVPIVGAILIGFLYRHFWADSKSS
13
103
1AWP
-3
87
P04166
A
1
2
92
13
103
1AWP
-3
87
P04166
B
1
2
92
1
VAL
engineered mutation
LEU
45
1AWP
A
P04166
UNP
61
50
1
VAL
engineered mutation
LEU
61
1AWP
A
P04166
UNP
77
66
2
VAL
engineered mutation
LEU
45
1AWP
B
P04166
UNP
61
50
2
VAL
engineered mutation
LEU
61
1AWP
B
P04166
UNP
77
66
3
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TRP
22
A
TRP
27
A
ILE
25
A
ILE
30
A
ARG
28
A
ARG
33
A
ASP
31
A
ASP
36
A
TYR
75
A
TYR
80
A
ASP
78
A
ASP
83
B
TRP
22
B
TRP
27
B
ILE
25
B
ILE
30
B
ARG
28
B
ARG
33
B
ASP
31
B
ASP
36
B
TYR
75
B
TYR
80
B
ASP
78
B
ASP
83
BINDING SITE FOR RESIDUE HEM A 201
A
HEM
201
Software
12
BINDING SITE FOR RESIDUE HEM B 201
B
HEM
201
Software
14
A
ILE
32
A
ILE
37
12
1_555
A
PHE
35
A
PHE
40
12
1_555
A
HIS
39
A
HIS
44
12
1_555
A
PRO
40
A
PRO
45
12
1_555
A
LEU
46
A
LEU
51
12
1_555
A
SER
57
A
SER
62
12
1_555
A
LEU
61
A
LEU
66
12
1_555
A
HIS
63
A
HIS
68
12
1_555
A
SER
64
A
SER
69
12
1_555
A
HOH
233
E
HOH
12
1_555
B
PRO
65
B
PRO
70
12
2_665
B
ARG
68
B
ARG
73
12
2_665
B
ILE
25
B
ILE
30
14
1_555
B
ARG
34
B
ARG
39
14
4_556
B
PHE
35
B
PHE
40
14
1_555
B
HIS
39
B
HIS
44
14
1_555
B
PRO
40
B
PRO
45
14
1_555
B
LEU
45
B
LEU
50
14
1_555
B
LEU
46
B
LEU
51
14
1_555
B
PHE
58
B
PHE
63
14
1_555
B
LEU
61
B
LEU
66
14
1_555
B
HIS
63
B
HIS
68
14
1_555
B
SER
64
B
SER
69
14
1_555
B
ALA
67
B
ALA
72
14
1_555
B
MET
70
B
MET
75
14
1_555
B
LEU
71
B
LEU
76
14
1_555
19
P 21 21 21