1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Mao, B. Gorin, A.A. Gu, Z. Hingerty, B.E. Broyde, S. Patel, D.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C13 H11 N 181.233 2-AMINOFLUORENE non-polymer C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking US Biochemistry BICHAW 0033 0006-2960 36 14479 14490 10.1021/bi972205z 9398167 Solution structure of the aminofluorene-intercalated conformer of the syn [AF]-C8-dG adduct opposite a--2 deletion site in the NarI hot spot sequence context. 1997 10.2210/pdb1ax6/pdb pdb_00001ax6 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 N ATOM OF AF-GROUP LINKED TO C8 ATOM OF DG7 3599.343 DNA DUPLEX D(CTCGGC-[AF]G-CCATC)D(GATGGCCGAG) 1 syn polymer N ATOM OF AF-GROUP LINKED TO C8 ATOM OF DG7 3110.041 DNA DUPLEX D(CTCGGC-[AF]G-CCATC)D(GATGGCCGAG) 1 syn polymer 181.233 2-AMINOFLUORENE 1 syn non-polymer no no (DC)(DT)(DC)(DG)(DG)(DC)(DG)(DC)(DC)(DA)(DT)(DC) CTCGGCGCCATC A polydeoxyribonucleotide no no (DG)(DA)(DT)(DG)(DG)(DC)(DC)(DG)(DA)(DG) GATGGCCGAG B polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n 15.556 1 19 A 1 B 22 2.148 A_DC1:DG22_B 1 -9.159 0.440 -0.561 -0.142 -3.511 1 20 A 2 B 21 -2.449 A_DT2:DA21_B 2 -13.715 -0.413 0.075 -0.134 -14.063 1 19 A 3 B 20 0.318 A_DC3:DG20_B 3 -1.414 1.132 0.509 -0.455 12.300 1 19 A 4 B 19 -2.664 A_DG4:DC19_B 4 -26.007 -0.716 0.741 -0.472 -3.738 1 19 A 5 B 18 3.544 A_DG5:DC18_B 5 17.056 -0.306 0.367 -0.238 21.430 1 19 A 8 B 17 3.444 A_DC8:DG17_B 6 -26.958 1.159 -0.501 -0.438 -29.951 1 19 A 9 B 16 2.112 A_DC9:DG16_B 7 0.801 1.059 0.484 -0.211 -14.790 1 20 A 10 B 15 1.060 A_DA10:DT15_B 8 -17.769 -0.028 0.003 -0.141 1.081 1 20 A 11 B 14 6.663 A_DT11:DA14_B 9 -13.360 -0.042 0.278 -0.323 -4.647 1 19 A 12 B 13 1.838 A_DC12:DG13_B 10 -12.529 1.042 0.480 -0.369 3.212 36.027 A A 1 2 55.648 B B 22 21 4.134 29.558 -0.152 0.985 AA_DC1DT2:DA21DG22_BB 1 -2.148 4.044 20.719 -4.501 -0.197 4.151 45.761 A A 2 3 24.007 B B 21 20 3.754 18.195 -0.038 1.795 AA_DT2DC3:DG20DA21_BB 2 -2.426 3.201 42.100 0.303 -0.218 2.397 21.213 A A 3 4 10.318 B B 20 19 2.437 3.758 0.382 -0.173 AA_DC3DG4:DC19DG20_BB 3 3.854 -10.582 20.526 -1.639 0.160 3.612 54.097 A A 4 5 -35.095 B B 19 18 4.035 -30.305 1.402 -0.274 AA_DG4DG5:DC18DC19_BB 4 1.985 -2.299 45.309 2.114 -1.384 4.034 53.473 A A 5 8 43.096 B B 18 17 5.062 34.166 -0.658 1.773 AA_DG5DC8:DG17DC18_BB 5 25.064 -31.615 33.399 -1.857 3.539 4.517 58.716 A A 8 9 15.294 B B 17 16 4.304 14.780 1.017 0.951 AA_DC8DC9:DG16DG17_BB 6 11.284 -11.676 55.944 -0.093 -0.225 2.227 33.186 A A 9 10 19.751 B B 16 15 2.586 10.983 0.684 -0.938 AA_DC9DA10:DT15DG16_BB 7 7.408 -13.323 30.495 -3.059 -0.242 2.702 27.280 A A 10 11 -11.807 B B 15 14 2.714 -5.527 0.410 -0.388 AA_DA10DT11:DA14DT15_BB 8 -1.906 4.072 26.657 0.333 -1.268 3.131 46.076 A A 11 12 15.369 B B 14 13 3.253 11.906 -0.680 -0.033 AA_DT11DC12:DG13DA14_BB 9 1.026 -1.325 44.581 -1.058 0.957 database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list struct_conn struct_site repository Initial release Version format compliance Version format compliance Database references Derived calculations Other 1 0 1998-07-01 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-02-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1997-10-30 REL REL AF 2-AMINOFLUORENE ALL CONFORMERS PRESENTED 6 6 NOESY COSY TOCSY 7.0 322 K REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE. RELAXATION MATRIX REFINEMENT BRUNGER refinement X-PLOR 3.1 structure solution VNMR structure solution DUPLEX structure solution X-PLOR 500 Varian VARIAN UNITY PLUS 600 Varian VARIAN UNITY PLUS AF 23 3 AF AF 23 A C 1 n 1 DC 1 A T 2 n 2 DT 2 A C 3 n 3 DC 3 A G 4 n 4 DG 4 A G 5 n 5 DG 5 A C 6 n 6 DC 6 A G 7 n 7 DG 7 A C 8 n 8 DC 8 A C 9 n 9 DC 9 A A 10 n 10 DA 10 A T 11 n 11 DT 11 A C 12 n 12 DC 12 A G 13 n 1 DG 13 B A 14 n 2 DA 14 B T 15 n 3 DT 15 B G 16 n 4 DG 16 B G 17 n 5 DG 17 B C 18 n 6 DC 18 B C 19 n 7 DC 19 B G 20 n 8 DG 20 B A 21 n 9 DA 21 B G 22 n 10 DG 22 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A B H3 N1 DT DA 11 14 1.59 1 -6.67 0.80 105.90 99.23 A A A O4' C1' C2' DT DT DT 2 2 2 N 1 -5.60 0.70 108.00 102.40 A A A O4' C1' N1 DC DC DC 3 3 3 N 1 -6.84 0.70 102.20 95.36 A A A C4' C3' C2' DG DG DG 4 4 4 N 1 -5.21 0.80 105.90 100.69 A A A O4' C1' C2' DG DG DG 4 4 4 N 1 7.87 0.30 108.30 116.17 A A A O4' C1' N9 DG DG DG 4 4 4 N 1 12.48 1.20 119.70 132.18 A A A C3' O3' P DG DG DG 4 4 5 Y 1 -6.67 0.80 105.90 99.23 A A A O4' C1' C2' DG DG DG 5 5 5 N 1 2.52 0.30 108.30 110.82 A A A O4' C1' N1 DC DC DC 6 6 6 N 1 -5.66 0.70 108.00 102.34 A A A O4' C1' N9 DA DA DA 10 10 10 N 1 -3.67 0.60 122.90 119.23 A A A C6 C5 C7 DT DT DT 11 11 11 N 1 -6.17 0.70 108.00 101.83 A A A O4' C1' N1 DC DC DC 12 12 12 N 1 4.07 0.60 118.90 122.97 A A A N1 C2 O2 DC DC DC 12 12 12 N 1 -4.36 0.70 102.20 97.84 B B B C4' C3' C2' DT DT DT 15 15 15 N 1 -8.62 0.80 105.90 97.28 B B B O4' C1' C2' DT DT DT 15 15 15 N 1 14.56 0.30 108.30 122.86 B B B O4' C1' N1 DT DT DT 15 15 15 N 1 4.13 0.30 108.30 112.43 B B B O4' C1' N9 DG DG DG 16 16 16 N 1 -4.52 0.70 102.20 97.68 B B B C4' C3' C2' DG DG DG 17 17 17 N 1 10.70 1.40 114.30 125.00 B B B N9 C1' C2' DG DG DG 17 17 17 N 1 9.78 1.20 119.70 129.48 B B B C3' O3' P DG DG DC 17 17 18 Y 1 -5.09 0.80 102.40 97.31 B B B C3' C2' C1' DC DC DC 18 18 18 N 1 -4.84 0.70 108.00 103.16 B B B O4' C1' N1 DC DC DC 19 19 19 N 1 -5.09 0.70 108.00 102.91 B B B O4' C1' N9 DG DG DG 20 20 20 N 1 -4.70 0.70 108.00 103.30 B B B O4' C1' N9 DA DA DA 21 21 21 N 2 -4.55 0.70 102.20 97.65 A A A C4' C3' C2' DC DC DC 1 1 1 N 2 2.48 0.30 108.30 110.78 A A A O4' C1' N1 DC DC DC 1 1 1 N 2 -6.22 0.80 105.90 99.68 A A A O4' C1' C2' DT DT DT 2 2 2 N 2 -7.58 0.70 108.00 100.42 A A A O4' C1' N1 DC DC DC 3 3 3 N 2 -5.38 0.70 102.20 96.82 A A A C4' C3' C2' DG DG DG 4 4 4 N 2 -5.67 0.80 105.90 100.23 A A A O4' C1' C2' DG DG DG 4 4 4 N 2 4.58 0.30 108.30 112.88 A A A O4' C1' N9 DG DG DG 4 4 4 N 2 11.53 1.60 120.90 132.43 A A A P O5' C5' DG DG DG 5 5 5 N 2 -7.47 1.00 110.10 102.63 A A A C1' O4' C4' DG DG DG 5 5 5 N 2 12.49 2.00 112.30 124.79 A A A C4' C3' O3' DG DG DG 5 5 5 N 2 8.99 1.40 114.30 123.29 A A A N9 C1' C2' DG DG DG 7 7 7 N 2 -5.41 0.70 108.00 102.59 A A A O4' C1' N9 DA DA DA 10 10 10 N 2 -3.84 0.60 122.90 119.06 A A A C6 C5 C7 DT DT DT 11 11 11 N 2 -6.67 0.80 105.90 99.23 B B B O4' C1' C2' DG DG DG 13 13 13 N 2 -6.21 0.80 105.90 99.69 B B B O4' C1' C2' DA DA DA 14 14 14 N 2 -7.49 0.80 105.90 98.41 B B B O4' C1' C2' DT DT DT 15 15 15 N 2 5.34 0.30 108.30 113.64 B B B O4' C1' N1 DT DT DT 15 15 15 N 2 -5.77 0.70 102.20 96.43 B B B C4' C3' C2' DG DG DG 16 16 16 N 2 2.73 0.30 108.30 111.03 B B B O4' C1' N9 DG DG DG 16 16 16 N 2 3.11 0.30 108.30 111.41 B B B O4' C1' N9 DG DG DG 17 17 17 N 2 -6.99 1.00 110.10 103.11 B B B C1' O4' C4' DC DC DC 18 18 18 N 2 -4.88 0.80 105.90 101.02 B B B O4' C1' C2' DC DC DC 18 18 18 N 2 7.82 1.20 119.70 127.52 B B B C3' O3' P DC DC DC 18 18 19 Y 2 -6.89 0.80 105.90 99.01 B B B O4' C1' C2' DG DG DG 20 20 20 N 2 -8.40 0.70 108.00 99.60 B B B O4' C1' N9 DA DA DA 21 21 21 N 2 -5.84 0.80 105.90 100.06 B B B O4' C1' C2' DG DG DG 22 22 22 N 2 2.12 0.30 108.30 110.42 B B B O4' C1' N9 DG DG DG 22 22 22 N 3 -4.96 0.70 102.20 97.24 A A A C4' C3' C2' DC DC DC 1 1 1 N 3 -5.36 0.80 105.90 100.54 A A A O4' C1' C2' DC DC DC 1 1 1 N 3 4.80 0.30 108.30 113.10 A A A O4' C1' N1 DC DC DC 1 1 1 N 3 2.08 0.30 108.30 110.38 A A A O4' C1' N1 DT DT DT 2 2 2 N 3 4.63 0.70 124.90 129.53 A A A C5 C4 O4 DT DT DT 2 2 2 N 3 -4.00 0.60 122.90 118.90 A A A C6 C5 C7 DT DT DT 2 2 2 N 3 -6.35 0.70 108.00 101.65 A A A O4' C1' N1 DC DC DC 3 3 3 N 3 -6.06 0.70 102.20 96.14 A A A C4' C3' C2' DG DG DG 4 4 4 N 3 -6.04 0.80 105.90 99.86 A A A O4' C1' C2' DG DG DG 4 4 4 N 3 3.93 0.30 108.30 112.23 A A A O4' C1' N9 DG DG DG 4 4 4 N 3 -3.69 0.40 104.50 100.81 A A A O4' C4' C3' DG DG DG 5 5 5 N 3 -7.09 1.00 110.10 103.01 A A A C1' O4' C4' DG DG DG 5 5 5 N 3 -5.88 0.70 108.00 102.12 A A A O4' C1' N9 DA DA DA 10 10 10 N 3 3.20 0.30 108.30 111.50 A A A O4' C1' N1 DT DT DT 11 11 11 N 3 -5.42 0.70 108.00 102.58 A A A O4' C1' N1 DC DC DC 12 12 12 N 3 1.88 0.30 108.30 110.18 B B B O4' C1' N9 DG DG DG 13 13 13 N 3 -4.37 0.70 108.00 103.63 B B B O4' C1' N9 DA DA DA 14 14 14 N 3 -6.93 1.00 110.10 103.17 B B B C1' O4' C4' DT DT DT 15 15 15 N 3 5.36 0.30 108.30 113.66 B B B O4' C1' N1 DT DT DT 15 15 15 N 3 -8.66 0.80 105.90 97.24 B B B O4' C1' C2' DC DC DC 19 19 19 N 3 -6.72 0.80 102.40 95.68 B B B C3' C2' C1' DG DG DG 20 20 20 N 3 2.12 0.30 108.30 110.42 B B B O4' C1' N9 DG DG DG 20 20 20 N 3 7.59 1.20 119.70 127.29 B B B C3' O3' P DG DG DA 20 20 21 Y 3 -4.59 0.70 108.00 103.41 B B B O4' C1' N9 DA DA DA 21 21 21 N 4 -5.04 0.70 102.20 97.16 A A A C4' C3' C2' DC DC DC 1 1 1 N 4 3.65 0.30 108.30 111.95 A A A O4' C1' N1 DC DC DC 1 1 1 N 4 5.67 0.30 108.30 113.97 A A A O4' C1' N1 DT DT DT 2 2 2 N 4 -7.87 0.70 108.00 100.13 A A A O4' C1' N1 DC DC DC 3 3 3 N 4 3.73 0.60 118.90 122.63 A A A N1 C2 O2 DC DC DC 3 3 3 N 4 -5.71 0.70 102.20 96.49 A A A C4' C3' C2' DG DG DG 4 4 4 N 4 6.81 0.30 108.30 115.11 A A A O4' C1' N9 DG DG DG 4 4 4 N 4 -3.29 0.40 104.50 101.21 A A A O4' C4' C3' DG DG DG 5 5 5 N 4 10.58 1.60 120.90 131.48 A A A P O5' C5' DC DC DC 6 6 6 N 4 -3.79 0.40 104.50 100.71 A A A O4' C4' C3' DC DC DC 6 6 6 N 4 2.84 0.30 108.30 111.14 A A A O4' C1' N9 DG DG DG 7 7 7 N 4 -8.58 0.80 105.90 97.32 A A A O4' C1' C2' DC DC DC 9 9 9 N 4 2.58 0.30 108.30 110.88 A A A O4' C1' N1 DC DC DC 9 9 9 N 4 -6.09 0.80 105.90 99.81 A A A O4' C1' C2' DA DA DA 10 10 10 N 4 -5.68 0.70 108.00 102.32 A A A O4' C1' N9 DA DA DA 10 10 10 N 4 -5.46 0.60 122.90 117.44 A A A C6 C5 C7 DT DT DT 11 11 11 N 4 -4.94 0.80 102.40 97.46 B B B C3' C2' C1' DG DG DG 13 13 13 N 4 -5.17 0.70 102.20 97.03 B B B C4' C3' C2' DT DT DT 15 15 15 N 4 -8.11 0.80 105.90 97.79 B B B O4' C1' C2' DT DT DT 15 15 15 N 4 15.56 0.30 108.30 123.86 B B B O4' C1' N1 DT DT DT 15 15 15 N 4 -4.82 0.60 122.90 118.08 B B B C6 C5 C7 DT DT DT 15 15 15 N 4 3.53 0.30 108.30 111.83 B B B O4' C1' N9 DG DG DG 16 16 16 N 4 -3.74 0.40 104.50 100.76 B B B O4' C4' C3' DG DG DG 17 17 17 N 4 5.64 0.30 108.30 113.94 B B B O4' C1' N9 DG DG DG 17 17 17 N 4 -6.94 0.80 105.90 98.96 B B B O4' C1' C2' DC DC DC 18 18 18 N 4 -5.65 0.80 102.40 96.75 B B B C3' C2' C1' DG DG DG 20 20 20 N 4 7.91 1.20 119.70 127.61 B B B C3' O3' P DG DG DA 20 20 21 Y 5 -4.74 0.70 102.20 97.46 A A A C4' C3' C2' DC DC DC 1 1 1 N 5 -12.21 0.70 108.00 95.79 A A A O4' C1' N1 DC DC DC 3 3 3 N 5 8.76 1.20 119.70 128.46 A A A C3' O3' P DC DC DG 3 3 4 Y 5 -5.54 0.70 102.20 96.66 A A A C4' C3' C2' DG DG DG 4 4 4 N 5 8.87 0.30 108.30 117.17 A A A O4' C1' N9 DG DG DG 4 4 4 N 5 -4.64 0.70 108.00 103.36 A A A O4' C1' N9 DG DG DG 5 5 5 N 5 -2.72 0.40 104.50 101.78 A A A O4' C4' C3' DC DC DC 6 6 6 N 5 -4.21 0.70 102.20 97.99 A A A C4' C3' C2' DC DC DC 6 6 6 N 5 2.45 0.30 108.30 110.75 A A A O4' C1' N1 DC DC DC 6 6 6 N 5 9.73 1.20 119.70 129.43 A A A C3' O3' P DC DC DG 6 6 7 Y 5 3.66 0.30 108.30 111.96 A A A O4' C1' N9 DG DG DG 7 7 7 N 5 -5.06 0.80 105.90 100.84 A A A O4' C1' C2' DC DC DC 9 9 9 N 5 -5.74 0.70 108.00 102.26 A A A O4' C1' N1 DC DC DC 9 9 9 N 5 -5.49 0.80 105.90 100.41 A A A O4' C1' C2' DA DA DA 10 10 10 N 5 9.80 1.20 115.70 125.50 A A A C5' C4' C3' DT DT DT 11 11 11 N 5 -5.57 0.80 102.40 96.83 B B B C3' C2' C1' DG DG DG 13 13 13 N 5 2.86 0.30 108.30 111.16 B B B O4' C1' N9 DG DG DG 13 13 13 N 5 -5.31 0.80 105.90 100.59 B B B O4' C1' C2' DT DT DT 15 15 15 N 5 -2.68 0.40 104.50 101.82 B B B O4' C4' C3' DG DG DG 17 17 17 N 5 -5.09 0.80 102.40 97.31 B B B C3' C2' C1' DC DC DC 18 18 18 N 5 -5.89 0.80 105.90 100.01 B B B O4' C1' C2' DC DC DC 18 18 18 N 5 6.98 0.30 108.30 115.28 B B B O4' C1' N1 DC DC DC 18 18 18 N 5 3.73 0.60 118.90 122.63 B B B N1 C2 O2 DC DC DC 19 19 19 N 5 -7.18 0.80 105.90 98.72 B B B O4' C1' C2' DG DG DG 20 20 20 N 5 7.96 1.20 119.70 127.66 B B B C3' O3' P DA DA DG 21 21 22 Y 6 -4.49 0.70 102.20 97.71 A A A C4' C3' C2' DC DC DC 1 1 1 N 6 1.85 0.30 108.30 110.15 A A A O4' C1' N1 DC DC DC 1 1 1 N 6 2.22 0.30 108.30 110.52 A A A O4' C1' N1 DT DT DT 2 2 2 N 6 -4.64 0.60 122.90 118.26 A A A C6 C5 C7 DT DT DT 2 2 2 N 6 -11.31 0.70 108.00 96.69 A A A O4' C1' N1 DC DC DC 3 3 3 N 6 -6.17 0.70 102.20 96.03 A A A C4' C3' C2' DG DG DG 4 4 4 N 6 -6.16 0.80 105.90 99.74 A A A O4' C1' C2' DG DG DG 4 4 4 N 6 9.24 0.30 108.30 117.54 A A A O4' C1' N9 DG DG DG 4 4 4 N 6 9.31 1.20 115.70 125.01 A A A C5' C4' C3' DG DG DG 5 5 5 N 6 -5.20 0.70 102.20 97.00 A A A C4' C3' C2' DG DG DG 5 5 5 N 6 8.30 1.20 119.70 128.00 A A A C3' O3' P DG DG DC 5 5 6 Y 6 -4.44 0.70 102.20 97.76 A A A C4' C3' C2' DG DG DG 7 7 7 N 6 3.61 0.30 108.30 111.91 A A A O4' C1' N9 DG DG DG 7 7 7 N 6 -6.60 0.70 108.00 101.40 A A A O4' C1' N1 DC DC DC 8 8 8 N 6 3.72 0.60 118.90 122.62 A A A N1 C2 O2 DC DC DC 8 8 8 N 6 2.23 0.30 108.30 110.53 B B B O4' C1' N9 DG DG DG 13 13 13 N 6 -4.58 0.70 108.00 103.42 B B B O4' C1' N9 DA DA DA 14 14 14 N 6 -8.51 1.00 110.10 101.59 B B B C1' O4' C4' DT DT DT 15 15 15 N 6 5.35 0.30 108.30 113.65 B B B O4' C1' N1 DT DT DT 15 15 15 N 6 7.51 1.20 119.70 127.21 B B B C3' O3' P DG DG DG 16 16 17 Y 6 8.56 1.40 114.30 122.86 B B B N9 C1' C2' DG DG DG 17 17 17 N 6 -5.30 0.80 102.40 97.10 B B B C3' C2' C1' DC DC DC 18 18 18 N 6 -6.47 0.80 105.90 99.43 B B B O4' C1' C2' DC DC DC 18 18 18 N 6 3.46 0.30 108.30 111.76 B B B O4' C1' N1 DC DC DC 18 18 18 N 6 -8.09 1.00 110.10 102.01 B B B C1' O4' C4' DG DG DG 20 20 20 N 6 5.29 0.30 108.30 113.59 B B B O4' C1' N9 DG DG DG 20 20 20 N 6 2.43 0.40 105.40 107.83 B B B N9 C4 C5 DG DG DG 20 20 20 N 6 10.30 1.20 119.70 130.00 B B B C3' O3' P DG DG DA 20 20 21 Y 6 -5.22 0.80 102.40 97.18 B B B C3' C2' C1' DG DG DG 22 22 22 N 1 A A C5 C7 DT DT 2 2 0.038 0.006 1.496 1.534 N 1 A A C5' C4' DG DG 4 4 0.058 0.007 1.512 1.570 N 1 A A C5 C7 DT DT 11 11 0.039 0.006 1.496 1.535 N 1 B B C5 C7 DT DT 15 15 0.039 0.006 1.496 1.535 N 1 B B C5' C4' DG DG 17 17 0.045 0.007 1.512 1.557 N 2 A A C5 C7 DT DT 2 2 0.038 0.006 1.496 1.534 N 3 A A C5 C7 DT DT 2 2 0.041 0.006 1.496 1.537 N 3 A A C5 C7 DT DT 11 11 0.041 0.006 1.496 1.537 N 3 B B C5 C7 DT DT 15 15 0.040 0.006 1.496 1.536 N 4 A A C5 C7 DT DT 2 2 0.038 0.006 1.496 1.534 N 4 A A C5' C4' DC DC 6 6 0.048 0.007 1.512 1.560 N 5 A A C5 C7 DT DT 2 2 0.043 0.006 1.496 1.539 N 5 A A C5' C4' DT DT 11 11 0.059 0.007 1.512 1.571 N 5 A A C5 C7 DT DT 11 11 0.040 0.006 1.496 1.536 N 6 A A C5 C7 DT DT 2 2 0.037 0.006 1.496 1.533 N 6 A A C5' C4' DG DG 5 5 0.053 0.007 1.512 1.565 N 6 A A C5 C7 DT DT 11 11 0.042 0.006 1.496 1.538 N 6 B B C5 C7 DT DT 15 15 0.040 0.006 1.496 1.536 N model building X-PLOR 3.1 refinement X-PLOR 3.1 phasing X-PLOR 3.1 SOLUTION STRUCTURE OF THE [AF]-C8-DG ADDUCT OPPOSITE A-2 DELETION SITE IN THE NARI HOT SPOT SEQUENCE CONTEXT; NMR, 6 STRUCTURES 1 N N 2 N N 3 N N covale 1.479 none A DG 7 A C8 DG 7 1_555 A AF 23 C N AF 1_555 hydrog WATSON-CRICK A DC 1 A N3 DC 1 1_555 B DG 22 B N1 DG 10 1_555 hydrog WATSON-CRICK A DC 1 A N4 DC 1 1_555 B DG 22 B O6 DG 10 1_555 hydrog WATSON-CRICK A DC 1 A O2 DC 1 1_555 B DG 22 B N2 DG 10 1_555 hydrog WATSON-CRICK A DT 2 A N3 DT 2 1_555 B DA 21 B N1 DA 9 1_555 hydrog WATSON-CRICK A DT 2 A O4 DT 2 1_555 B DA 21 B N6 DA 9 1_555 hydrog WATSON-CRICK A DC 3 A N3 DC 3 1_555 B DG 20 B N1 DG 8 1_555 hydrog WATSON-CRICK A DC 3 A N4 DC 3 1_555 B DG 20 B O6 DG 8 1_555 hydrog WATSON-CRICK A DC 3 A O2 DC 3 1_555 B DG 20 B N2 DG 8 1_555 hydrog WATSON-CRICK A DG 4 A N1 DG 4 1_555 B DC 19 B N3 DC 7 1_555 hydrog WATSON-CRICK A DG 4 A N2 DG 4 1_555 B DC 19 B O2 DC 7 1_555 hydrog WATSON-CRICK A DG 4 A O6 DG 4 1_555 B DC 19 B N4 DC 7 1_555 hydrog WATSON-CRICK A DG 5 A N1 DG 5 1_555 B DC 18 B N3 DC 6 1_555 hydrog WATSON-CRICK A DG 5 A N2 DG 5 1_555 B DC 18 B O2 DC 6 1_555 hydrog WATSON-CRICK A DG 5 A O6 DG 5 1_555 B DC 18 B N4 DC 6 1_555 hydrog WATSON-CRICK A DC 8 A N3 DC 8 1_555 B DG 17 B N1 DG 5 1_555 hydrog WATSON-CRICK A DC 8 A N4 DC 8 1_555 B DG 17 B O6 DG 5 1_555 hydrog WATSON-CRICK A DC 8 A O2 DC 8 1_555 B DG 17 B N2 DG 5 1_555 hydrog WATSON-CRICK A DC 9 A N3 DC 9 1_555 B DG 16 B N1 DG 4 1_555 hydrog WATSON-CRICK A DC 9 A N4 DC 9 1_555 B DG 16 B O6 DG 4 1_555 hydrog WATSON-CRICK A DC 9 A O2 DC 9 1_555 B DG 16 B N2 DG 4 1_555 hydrog WATSON-CRICK A DA 10 A N1 DA 10 1_555 B DT 15 B N3 DT 3 1_555 hydrog WATSON-CRICK A DA 10 A N6 DA 10 1_555 B DT 15 B O4 DT 3 1_555 hydrog WATSON-CRICK A DT 11 A N3 DT 11 1_555 B DA 14 B N1 DA 2 1_555 hydrog WATSON-CRICK A DT 11 A O4 DT 11 1_555 B DA 14 B N6 DA 2 1_555 hydrog WATSON-CRICK A DC 12 A N3 DC 12 1_555 B DG 13 B N1 DG 1 1_555 hydrog WATSON-CRICK A DC 12 A N4 DC 12 1_555 B DG 13 B O6 DG 1 1_555 hydrog WATSON-CRICK A DC 12 A O2 DC 12 1_555 B DG 13 B N2 DG 1 1_555 DNA DNA DUPLEX, AMINOFLUORENE ADDUCT, CARCINOGEN ADDUCT, HOT SPOT SEQUENCE, DNA 1AX6 PDB 1 1AX6 1AX6 PDB 2 1AX6 1 12 1AX6 1 12 1AX6 A 1 1 12 13 22 1AX6 13 22 1AX6 B 2 1 10 BINDING SITE FOR RESIDUE AF A 23 A AF 23 Software 6 A DG 5 A DG 5 6 1_555 A DC 6 A DC 6 6 1_555 A DG 7 A DG 7 6 1_555 A DC 8 A DC 8 6 1_555 B DG 17 B DG 5 6 1_555 B DC 18 B DC 6 6 1_555 1 P 1