1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Gu, Z.
Gorin, A.A.
Krishnasami, R.
Hingerty, B.E.
Basu, A.K.
Broyde, S.
Patel, D.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C16 H11 N
217.265
N-1-AMINOPYRENE
non-polymer
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
N
1
N
N
Y
2
N
C
Y
3
N
C
Y
4
N
C
Y
5
N
C
Y
6
N
C
Y
7
N
C
Y
8
N
C
Y
9
N
C
Y
10
N
C
Y
11
N
C
Y
12
N
C
Y
13
N
C
Y
14
N
C
Y
15
N
C
Y
16
N
C
Y
17
N
C
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
H
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
O
N
30
N
P
N
31
N
O
N
32
N
O
N
33
N
O
N
34
N
C
N
35
R
C
N
36
N
O
N
37
S
C
N
38
N
O
N
39
N
C
N
40
R
C
Y
41
N
N
Y
42
N
C
Y
43
N
N
Y
44
N
C
Y
45
N
C
N
46
N
N
Y
47
N
N
Y
48
N
C
Y
49
N
N
Y
50
N
C
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
O
N
66
N
P
N
67
N
O
N
68
N
O
N
69
N
O
N
70
N
C
N
71
R
C
N
72
N
O
N
73
S
C
N
74
N
O
N
75
N
C
N
76
R
C
N
77
N
N
N
78
N
C
N
79
N
O
N
80
N
N
N
81
N
C
N
82
N
N
N
83
N
C
N
84
N
C
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
O
N
100
N
P
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
C
N
105
R
C
N
106
N
O
N
107
S
C
N
108
N
O
N
109
N
C
N
110
R
C
Y
111
N
N
Y
112
N
C
Y
113
N
N
Y
114
N
C
N
115
N
C
N
116
N
O
N
117
N
N
N
118
N
C
N
119
N
N
N
120
N
N
Y
121
N
C
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
O
N
137
N
P
N
138
N
O
N
139
N
O
N
140
N
O
N
141
N
C
N
142
R
C
N
143
N
O
N
144
S
C
N
145
N
O
N
146
N
C
N
147
R
C
N
148
N
N
N
149
N
C
N
150
N
O
N
151
N
N
N
152
N
C
N
153
N
O
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
Y
4
N
doub
Y
5
N
sing
Y
6
N
sing
N
7
N
sing
Y
8
N
doub
N
9
N
sing
Y
10
N
sing
Y
11
N
sing
Y
12
N
doub
N
13
N
sing
Y
14
N
sing
N
15
N
sing
Y
16
N
doub
Y
17
N
sing
Y
18
N
sing
N
19
N
sing
Y
20
N
doub
N
21
N
sing
Y
22
N
sing
N
23
N
sing
Y
24
N
doub
Y
25
N
sing
Y
26
N
sing
N
27
N
sing
Y
28
N
doub
N
29
N
sing
Y
30
N
sing
Y
31
N
doub
N
32
N
sing
N
33
N
sing
N
34
N
doub
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
Y
55
N
sing
Y
56
N
sing
Y
57
N
doub
N
58
N
sing
Y
59
N
sing
Y
60
N
sing
Y
61
N
doub
N
62
N
sing
Y
63
N
doub
N
64
N
sing
N
65
N
sing
Y
66
N
sing
Y
67
N
doub
N
68
N
sing
Y
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
doub
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
doub
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
Y
128
N
sing
Y
129
N
sing
Y
130
N
doub
N
131
N
sing
Y
132
N
sing
N
133
N
sing
Y
134
N
doub
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
doub
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
doub
N
174
N
sing
N
175
N
sing
N
176
N
doub
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
38
10843
10854
10.1021/bi9912138
10451381
Solution structure of the N-(deoxyguanosin-8-yl)-1-aminopyrene ([AP]dG) adduct opposite dA in a DNA duplex.
1999
10.2210/pdb1axu/pdb
pdb_00001axu
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
N1 ATOM OF AP LINKED TO C8 ATOM OF DG6
3254.138
DNA DUPLEX D(CCATC-[AP]G-CTACC)D(GGTAGAGATGG)
1
syn
polymer
N1 ATOM OF AP LINKED TO C8 ATOM OF DG6
3478.283
DNA DUPLEX D(CCATC-[AP]G-CTACC)D(GGTAGAGATGG)
1
syn
polymer
217.265
N-1-AMINOPYRENE
1
syn
non-polymer
no
no
(DC)(DC)(DA)(DT)(DC)(DG)(DC)(DT)(DA)(DC)(DC)
CCATCGCTACC
A
polydeoxyribonucleotide
no
no
(DG)(DG)(DT)(DA)(DG)(DA)(DG)(DA)(DT)(DG)(DG)
GGTAGAGATGG
B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
-6.265
1
19
A
1
B
22
-2.157
A_DC1:DG22_B
1
1.689
0.815
0.575
-0.464
9.562
1
19
A
2
B
21
2.015
A_DC2:DG21_B
2
0.832
1.050
-0.098
-0.378
-12.041
1
20
A
3
B
20
2.878
A_DA3:DT20_B
3
-12.482
0.397
-0.525
-0.111
3.353
1
20
A
4
B
19
2.565
A_DT4:DA19_B
4
-20.272
0.192
-0.762
-0.236
-29.350
1
19
A
5
B
18
3.134
A_DC5:DG18_B
5
-2.758
0.865
0.081
-0.217
-33.970
1
19
A
7
B
16
-0.259
A_DC7:DG16_B
6
-8.341
1.006
0.677
-0.389
-2.704
1
20
A
8
B
15
11.115
A_DT8:DA15_B
7
-3.647
-0.468
0.604
-0.109
17.635
1
20
A
9
B
14
6.904
A_DA9:DT14_B
8
-2.016
0.158
0.111
-0.068
17.458
1
19
A
10
B
13
-0.405
A_DC10:DG13_B
9
-15.915
0.900
-0.424
-0.359
-1.514
1
19
A
11
B
12
0.100
A_DC11:DG12_B
10
14.229
0.954
-0.086
-0.417
2.838
44.158
A
A
1
2
-9.872
B
B
22
21
2.837
-7.386
0.766
-0.004
AA_DC1DC2:DG21DG22_BB
1
2.524
-3.373
43.496
0.600
-0.813
2.583
41.621
A
A
2
3
27.484
B
B
21
20
3.513
18.715
-0.500
-0.884
AA_DC2DA3:DT20DG21_BB
2
9.209
-13.524
36.219
-3.233
1.681
2.614
36.691
A
A
3
4
7.869
B
B
20
19
2.588
4.937
0.059
0.370
AA_DA3DT4:DA19DT20_BB
3
2.029
-3.234
36.314
0.048
0.128
5.341
36.953
A
A
4
5
12.478
B
B
19
18
5.942
7.740
0.738
-0.043
AA_DT4DC5:DG18DA19_BB
4
-10.958
17.665
34.512
-1.935
-3.808
6.613
50.834
A
A
5
7
-2.104
B
B
18
16
6.757
-1.800
-1.233
-2.623
AA_DC5DC7:DG16DG18_BB
5
7.331
-8.568
50.308
-2.796
2.491
2.567
31.025
A
A
7
8
-2.723
B
B
16
15
2.506
-1.456
2.094
-0.084
AA_DC7DT8:DA15DG16_BB
6
0.921
-1.723
30.979
0.060
-3.777
2.317
26.975
A
A
8
9
6.513
B
B
15
14
2.517
3.028
-0.954
-0.878
AA_DT8DA9:DT14DA15_BB
7
2.292
-4.930
26.711
-2.457
2.480
3.409
40.110
A
A
9
10
-6.874
B
B
14
13
3.447
-4.699
-0.152
-0.069
AA_DA9DC10:DG13DT14_BB
8
3.453
-5.051
39.701
0.464
0.637
3.387
37.927
A
A
10
11
16.740
B
B
13
12
3.964
10.741
0.399
-1.580
AA_DC10DC11:DG12DG13_BB
9
0.650
-1.012
36.422
-4.009
-0.519
database_2
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conn
struct_site
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Other
Data collection
1
0
1998-07-01
1
1
2008-03-24
1
2
2011-07-13
1
3
2022-02-16
1
4
2024-05-22
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1997-10-21
REL
REL
AP
N-1-AMINOPYRENE
THE BEST TOTAL ENERGY
24
9
NOESY
COSY
TOCSY
DQF-COSY
7.0
322
K
REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE.
RELAXATION MATRIX REFINEMENT
BRUNGER
refinement
X-PLOR
3.1
structure solution
VNMR
structure solution
DUPLEX
structure solution
X-PLOR
500
Varian
VARIAN UNITY PLUS
600
Varian
VARIAN UNITY PLUS
AP
23
3
AP
AP
23
A
C
1
n
1
DC
1
A
C
2
n
2
DC
2
A
A
3
n
3
DA
3
A
T
4
n
4
DT
4
A
C
5
n
5
DC
5
A
G
6
n
6
DG
6
A
C
7
n
7
DC
7
A
T
8
n
8
DT
8
A
A
9
n
9
DA
9
A
C
10
n
10
DC
10
A
C
11
n
11
DC
11
A
G
12
n
1
DG
12
B
G
13
n
2
DG
13
B
T
14
n
3
DT
14
B
A
15
n
4
DA
15
B
G
16
n
5
DG
16
B
A
17
n
6
DA
17
B
G
18
n
7
DG
18
B
A
19
n
8
DA
19
B
T
20
n
9
DT
20
B
G
21
n
10
DG
21
B
G
22
n
11
DG
22
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
-7.15
0.80
105.90
98.75
A
A
A
O4'
C1'
C2'
DC
DC
DC
1
1
1
N
1
-5.07
0.80
102.40
97.33
A
A
A
C3'
C2'
C1'
DC
DC
DC
2
2
2
N
1
-6.93
0.80
105.90
98.97
A
A
A
O4'
C1'
C2'
DT
DT
DT
4
4
4
N
1
-4.92
0.80
102.40
97.48
A
A
A
C3'
C2'
C1'
DC
DC
DC
5
5
5
N
1
-5.34
0.80
105.90
100.56
A
A
A
O4'
C1'
C2'
DC
DC
DC
5
5
5
N
1
7.38
1.10
109.80
117.18
A
A
A
C5'
C4'
O4'
DG
DG
DG
6
6
6
N
1
-6.29
0.80
105.90
99.61
A
A
A
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
1
3.83
0.30
108.30
112.13
A
A
A
O4'
C1'
N9
DG
DG
DG
6
6
6
N
1
-4.26
0.70
108.00
103.74
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
1
-6.86
1.00
110.10
103.24
A
A
A
C1'
O4'
C4'
DT
DT
DT
8
8
8
N
1
-8.60
0.70
108.00
99.40
A
A
A
O4'
C1'
N9
DA
DA
DA
9
9
9
N
1
5.57
0.30
108.30
113.87
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
1
-5.91
0.70
102.20
96.29
B
B
B
C4'
C3'
C2'
DG
DG
DG
12
12
12
N
1
-5.41
0.80
102.40
96.99
B
B
B
C3'
C2'
C1'
DG
DG
DG
12
12
12
N
1
4.26
0.30
108.30
112.56
B
B
B
O4'
C1'
N9
DG
DG
DG
13
13
13
N
1
-6.95
1.00
110.10
103.15
B
B
B
C1'
O4'
C4'
DA
DA
DA
15
15
15
N
1
5.00
0.30
108.30
113.30
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
1
13.39
2.00
112.30
125.69
B
B
B
C4'
C3'
O3'
DG
DG
DG
16
16
16
N
1
-6.57
0.70
108.00
101.43
B
B
B
O4'
C1'
N9
DA
DA
DA
17
17
17
N
1
3.25
0.30
108.30
111.55
B
B
B
O4'
C1'
N9
DG
DG
DG
18
18
18
N
1
8.87
1.20
119.70
128.57
B
B
B
C3'
O3'
P
DG
DG
DA
18
18
19
Y
1
-4.81
0.60
122.90
118.09
B
B
B
C6
C5
C7
DT
DT
DT
20
20
20
N
1
10.20
1.20
119.70
129.90
B
B
B
C3'
O3'
P
DG
DG
DG
21
21
22
Y
1
-6.34
0.70
108.00
101.66
B
B
B
O4'
C1'
N9
DG
DG
DG
22
22
22
N
2
-4.55
0.70
102.20
97.65
A
A
A
C4'
C3'
C2'
DC
DC
DC
1
1
1
N
2
-6.58
0.70
108.00
101.42
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
N
2
4.20
0.60
118.90
123.10
A
A
A
N1
C2
O2
DC
DC
DC
1
1
1
N
2
2.91
0.30
108.30
111.21
A
A
A
O4'
C1'
N1
DC
DC
DC
2
2
2
N
2
-5.20
0.80
105.90
100.70
A
A
A
O4'
C1'
C2'
DC
DC
DC
5
5
5
N
2
3.21
0.30
108.30
111.51
A
A
A
O4'
C1'
N1
DC
DC
DC
5
5
5
N
2
-5.48
0.80
105.90
100.42
A
A
A
O4'
C1'
C2'
DC
DC
DC
7
7
7
N
2
-6.13
0.70
108.00
101.87
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
2
-6.47
0.80
105.90
99.43
A
A
A
O4'
C1'
C2'
DT
DT
DT
8
8
8
N
2
3.54
0.30
108.30
111.84
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
2
3.75
0.60
118.90
122.65
A
A
A
N1
C2
O2
DC
DC
DC
10
10
10
N
2
-6.32
0.70
102.20
95.88
B
B
B
C4'
C3'
C2'
DG
DG
DG
12
12
12
N
2
2.52
0.30
108.30
110.82
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
2
-9.59
1.00
110.10
100.51
B
B
B
C1'
O4'
C4'
DA
DA
DA
15
15
15
N
2
3.72
0.30
108.30
112.02
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
2
-6.36
0.40
104.50
98.14
B
B
B
O4'
C4'
C3'
DG
DG
DG
16
16
16
N
2
-8.11
1.00
110.10
101.99
B
B
B
C1'
O4'
C4'
DG
DG
DG
16
16
16
N
2
7.76
1.20
115.70
123.46
B
B
B
C5'
C4'
C3'
DA
DA
DA
17
17
17
N
2
-5.70
0.70
102.20
96.50
B
B
B
C4'
C3'
C2'
DG
DG
DG
18
18
18
N
2
3.67
0.30
108.30
111.97
B
B
B
O4'
C1'
N9
DG
DG
DG
18
18
18
N
2
-4.32
0.70
108.00
103.68
B
B
B
O4'
C1'
N1
DT
DT
DT
20
20
20
N
2
3.74
0.60
119.00
122.74
B
B
B
C4
C5
C7
DT
DT
DT
20
20
20
N
2
-6.03
0.60
122.90
116.87
B
B
B
C6
C5
C7
DT
DT
DT
20
20
20
N
2
-5.93
0.70
108.00
102.07
B
B
B
O4'
C1'
N9
DG
DG
DG
21
21
21
N
2
-5.52
0.70
108.00
102.48
B
B
B
O4'
C1'
N9
DG
DG
DG
22
22
22
N
3
-4.55
0.70
102.20
97.65
A
A
A
C4'
C3'
C2'
DC
DC
DC
1
1
1
N
3
-5.22
0.80
102.40
97.18
A
A
A
C3'
C2'
C1'
DC
DC
DC
1
1
1
N
3
-5.84
0.70
108.00
102.16
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
N
3
10.84
1.20
115.70
126.54
A
A
A
C5'
C4'
C3'
DT
DT
DT
4
4
4
N
3
1.80
0.30
108.30
110.10
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
3
7.76
1.20
119.70
127.46
A
A
A
C3'
O3'
P
DT
DT
DC
4
4
5
Y
3
3.80
0.30
108.30
112.10
A
A
A
O4'
C1'
N9
DG
DG
DG
6
6
6
N
3
-6.22
0.80
105.90
99.68
A
A
A
O4'
C1'
C2'
DC
DC
DC
7
7
7
N
3
-6.39
0.80
105.90
99.51
A
A
A
O4'
C1'
C2'
DT
DT
DT
8
8
8
N
3
-5.12
0.80
102.40
97.28
A
A
A
C3'
C2'
C1'
DC
DC
DC
10
10
10
N
3
2.44
0.30
108.30
110.74
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
3
-5.64
0.70
102.20
96.56
B
B
B
C4'
C3'
C2'
DG
DG
DG
12
12
12
N
3
-5.31
0.80
102.40
97.09
B
B
B
C3'
C2'
C1'
DG
DG
DG
12
12
12
N
3
4.71
0.30
108.30
113.01
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
3
4.63
0.30
108.30
112.93
B
B
B
O4'
C1'
N9
DG
DG
DG
13
13
13
N
3
-7.94
1.00
110.10
102.16
B
B
B
C1'
O4'
C4'
DA
DA
DA
15
15
15
N
3
6.77
0.30
108.30
115.07
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
3
11.19
1.60
120.90
132.09
B
B
B
P
O5'
C5'
DG
DG
DG
16
16
16
N
3
-5.55
0.40
104.50
98.95
B
B
B
O4'
C4'
C3'
DG
DG
DG
16
16
16
N
3
-7.72
1.00
110.10
102.38
B
B
B
C1'
O4'
C4'
DG
DG
DG
16
16
16
N
3
1.82
0.30
108.30
110.12
B
B
B
O4'
C1'
N9
DG
DG
DG
16
16
16
N
3
8.33
1.20
119.70
128.03
B
B
B
C3'
O3'
P
DG
DG
DA
16
16
17
Y
3
7.68
1.20
119.70
127.38
B
B
B
C3'
O3'
P
DA
DA
DG
17
17
18
Y
3
3.43
0.30
108.30
111.73
B
B
B
O4'
C1'
N9
DG
DG
DG
18
18
18
N
3
-5.31
0.80
105.90
100.59
B
B
B
O4'
C1'
C2'
DA
DA
DA
19
19
19
N
3
-4.40
0.70
102.20
97.80
B
B
B
C4'
C3'
C2'
DT
DT
DT
20
20
20
N
3
-4.39
0.60
122.90
118.51
B
B
B
C6
C5
C7
DT
DT
DT
20
20
20
N
3
-5.34
0.80
105.90
100.56
B
B
B
O4'
C1'
C2'
DG
DG
DG
21
21
21
N
3
7.82
1.20
119.70
127.52
B
B
B
C3'
O3'
P
DG
DG
DG
21
21
22
Y
3
-4.87
0.80
102.40
97.53
B
B
B
C3'
C2'
C1'
DG
DG
DG
22
22
22
N
4
-4.73
0.70
102.20
97.47
A
A
A
C4'
C3'
C2'
DC
DC
DC
1
1
1
N
4
-5.96
0.80
102.40
96.44
A
A
A
C3'
C2'
C1'
DC
DC
DC
1
1
1
N
4
-4.47
0.70
102.20
97.73
A
A
A
C4'
C3'
C2'
DC
DC
DC
2
2
2
N
4
-6.72
0.80
105.90
99.18
A
A
A
O4'
C1'
C2'
DT
DT
DT
4
4
4
N
4
3.91
0.60
119.00
122.91
A
A
A
C4
C5
C7
DT
DT
DT
4
4
4
N
4
-5.54
0.60
122.90
117.36
A
A
A
C6
C5
C7
DT
DT
DT
4
4
4
N
4
6.74
1.10
109.80
116.54
A
A
A
C5'
C4'
O4'
DC
DC
DC
5
5
5
N
4
-6.55
0.80
105.90
99.35
A
A
A
O4'
C1'
C2'
DC
DC
DC
5
5
5
N
4
-9.38
0.80
105.90
96.52
A
A
A
O4'
C1'
C2'
DT
DT
DT
8
8
8
N
4
-5.61
0.70
108.00
102.39
A
A
A
O4'
C1'
N9
DA
DA
DA
9
9
9
N
4
3.41
0.30
108.30
111.71
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
4
4.27
0.60
118.90
123.17
A
A
A
N1
C2
O2
DC
DC
DC
10
10
10
N
4
2.52
0.40
120.30
122.82
A
A
A
C6
N1
C2
DC
DC
DC
11
11
11
N
4
-4.31
0.70
102.20
97.89
B
B
B
C4'
C3'
C2'
DG
DG
DG
12
12
12
N
4
-5.33
0.80
102.40
97.07
B
B
B
C3'
C2'
C1'
DG
DG
DG
12
12
12
N
4
2.34
0.30
108.30
110.64
B
B
B
O4'
C1'
N9
DG
DG
DG
13
13
13
N
4
-7.45
1.00
110.10
102.65
B
B
B
C1'
O4'
C4'
DA
DA
DA
15
15
15
N
4
8.03
1.20
119.70
127.73
B
B
B
C3'
O3'
P
DA
DA
DG
15
15
16
Y
4
-6.92
1.00
110.10
103.18
B
B
B
C1'
O4'
C4'
DG
DG
DG
16
16
16
N
4
-7.13
0.80
102.40
95.27
B
B
B
C3'
C2'
C1'
DA
DA
DA
17
17
17
N
4
7.70
1.20
119.70
127.40
B
B
B
C3'
O3'
P
DA
DA
DG
17
17
18
Y
4
7.70
1.20
115.70
123.40
B
B
B
C5'
C4'
C3'
DG
DG
DG
18
18
18
N
4
-4.84
0.70
102.20
97.36
B
B
B
C4'
C3'
C2'
DG
DG
DG
18
18
18
N
4
1.87
0.30
108.30
110.17
B
B
B
O4'
C1'
N9
DG
DG
DG
18
18
18
N
4
4.43
0.30
108.30
112.73
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
4
-3.77
0.60
122.90
119.13
B
B
B
C6
C5
C7
DT
DT
DT
20
20
20
N
4
-4.86
0.80
102.40
97.54
B
B
B
C3'
C2'
C1'
DG
DG
DG
21
21
21
N
5
-6.06
0.80
105.90
99.84
A
A
A
O4'
C1'
C2'
DC
DC
DC
1
1
1
N
5
8.72
1.20
119.70
128.42
A
A
A
C3'
O3'
P
DC
DC
DC
1
1
2
Y
5
-5.85
0.70
108.00
102.15
A
A
A
O4'
C1'
N9
DA
DA
DA
3
3
3
N
5
10.47
1.20
115.70
126.17
A
A
A
C5'
C4'
C3'
DT
DT
DT
4
4
4
N
5
-4.92
0.80
102.40
97.48
A
A
A
C3'
C2'
C1'
DT
DT
DT
4
4
4
N
5
7.23
1.20
119.70
126.93
A
A
A
C3'
O3'
P
DT
DT
DC
4
4
5
Y
5
-7.04
1.00
110.10
103.06
A
A
A
C1'
O4'
C4'
DC
DC
DC
5
5
5
N
5
-8.30
0.80
105.90
97.60
A
A
A
O4'
C1'
C2'
DC
DC
DC
5
5
5
N
5
4.23
0.60
118.90
123.13
A
A
A
N1
C2
O2
DC
DC
DC
5
5
5
N
5
-5.29
0.80
105.90
100.61
A
A
A
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
5
7.59
0.30
108.30
115.89
A
A
A
O4'
C1'
N9
DG
DG
DG
6
6
6
N
5
3.65
0.60
118.90
122.55
A
A
A
N1
C2
O2
DC
DC
DC
7
7
7
N
5
-7.74
0.80
105.90
98.16
A
A
A
O4'
C1'
C2'
DT
DT
DT
8
8
8
N
5
-4.82
0.80
102.40
97.58
A
A
A
C3'
C2'
C1'
DA
DA
DA
9
9
9
N
5
-4.56
0.70
108.00
103.44
A
A
A
O4'
C1'
N9
DA
DA
DA
9
9
9
N
5
2.26
0.30
108.30
110.56
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
5
3.72
0.60
118.90
122.62
A
A
A
N1
C2
O2
DC
DC
DC
11
11
11
N
5
-5.79
0.70
102.20
96.41
B
B
B
C4'
C3'
C2'
DG
DG
DG
12
12
12
N
5
4.45
0.30
108.30
112.75
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
5
-5.28
0.80
105.90
100.62
B
B
B
O4'
C1'
C2'
DT
DT
DT
14
14
14
N
5
4.51
0.70
124.90
129.41
B
B
B
C5
C4
O4
DT
DT
DT
14
14
14
N
5
4.92
0.60
119.00
123.92
B
B
B
C4
C5
C7
DT
DT
DT
14
14
14
N
5
-7.02
0.60
122.90
115.88
B
B
B
C6
C5
C7
DT
DT
DT
14
14
14
N
5
-6.89
1.00
110.10
103.21
B
B
B
C1'
O4'
C4'
DA
DA
DA
15
15
15
N
5
-6.15
1.00
110.10
103.95
B
B
B
C1'
O4'
C4'
DG
DG
DG
16
16
16
N
5
-6.01
0.80
105.90
99.89
B
B
B
O4'
C1'
C2'
DG
DG
DG
16
16
16
N
5
-5.70
0.80
102.40
96.70
B
B
B
C3'
C2'
C1'
DA
DA
DA
17
17
17
N
5
-4.93
0.70
108.00
103.07
B
B
B
O4'
C1'
N9
DA
DA
DA
17
17
17
N
5
-4.71
0.40
104.50
99.79
B
B
B
O4'
C4'
C3'
DG
DG
DG
18
18
18
N
5
-4.85
0.80
102.40
97.55
B
B
B
C3'
C2'
C1'
DG
DG
DG
18
18
18
N
5
3.27
0.30
108.30
111.57
B
B
B
O4'
C1'
N9
DG
DG
DG
18
18
18
N
5
12.49
1.60
120.90
133.39
B
B
B
P
O5'
C5'
DA
DA
DA
19
19
19
N
5
7.22
1.20
119.70
126.92
B
B
B
C3'
O3'
P
DA
DA
DT
19
19
20
Y
5
4.31
0.30
108.30
112.61
B
B
B
O4'
C1'
N9
DG
DG
DG
21
21
21
N
6
-4.40
0.70
102.20
97.80
A
A
A
C4'
C3'
C2'
DC
DC
DC
1
1
1
N
6
-5.32
0.70
108.00
102.68
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
N
6
2.57
0.30
108.30
110.87
A
A
A
O4'
C1'
N1
DC
DC
DC
2
2
2
N
6
-4.25
0.70
108.00
103.75
A
A
A
O4'
C1'
N9
DA
DA
DA
3
3
3
N
6
10.96
1.20
115.70
126.66
A
A
A
C5'
C4'
C3'
DT
DT
DT
4
4
4
N
6
-7.23
1.00
110.10
102.87
A
A
A
C1'
O4'
C4'
DC
DC
DC
5
5
5
N
6
-8.84
0.80
105.90
97.06
A
A
A
O4'
C1'
C2'
DC
DC
DC
5
5
5
N
6
5.27
0.30
108.30
113.57
A
A
A
O4'
C1'
N1
DC
DC
DC
5
5
5
N
6
-5.78
0.80
105.90
100.12
A
A
A
O4'
C1'
C2'
DC
DC
DC
7
7
7
N
6
-7.74
0.80
105.90
98.16
A
A
A
O4'
C1'
C2'
DT
DT
DT
8
8
8
N
6
3.43
0.30
108.30
111.73
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
6
-6.10
0.70
102.20
96.10
B
B
B
C4'
C3'
C2'
DG
DG
DG
12
12
12
N
6
3.43
0.30
108.30
111.73
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
6
4.13
0.30
108.30
112.43
B
B
B
O4'
C1'
N9
DG
DG
DG
13
13
13
N
6
2.24
0.30
108.30
110.54
B
B
B
O4'
C1'
N1
DT
DT
DT
14
14
14
N
6
-6.68
1.00
110.10
103.42
B
B
B
C1'
O4'
C4'
DA
DA
DA
15
15
15
N
6
-6.84
0.80
105.90
99.06
B
B
B
O4'
C1'
C2'
DG
DG
DG
16
16
16
N
6
-6.49
0.80
102.40
95.91
B
B
B
C3'
C2'
C1'
DA
DA
DA
17
17
17
N
6
4.28
0.30
108.30
112.58
B
B
B
O4'
C1'
N9
DG
DG
DG
18
18
18
N
6
-4.94
0.60
122.90
117.96
B
B
B
C6
C5
C7
DT
DT
DT
20
20
20
N
7
-5.41
0.80
105.90
100.49
A
A
A
O4'
C1'
C2'
DC
DC
DC
1
1
1
N
7
2.63
0.30
108.30
110.93
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
N
7
-4.99
0.70
102.20
97.21
A
A
A
C4'
C3'
C2'
DC
DC
DC
2
2
2
N
7
3.97
0.60
118.90
122.87
A
A
A
N1
C2
O2
DC
DC
DC
2
2
2
N
7
10.84
1.20
119.70
130.54
A
A
A
C3'
O3'
P
DC
DC
DA
2
2
3
Y
7
-6.27
0.80
102.40
96.13
A
A
A
C3'
C2'
C1'
DT
DT
DT
4
4
4
N
7
-5.29
0.80
105.90
100.61
A
A
A
O4'
C1'
C2'
DC
DC
DC
5
5
5
N
7
-7.74
0.80
105.90
98.16
A
A
A
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
7
4.02
0.30
108.30
112.32
A
A
A
O4'
C1'
N9
DG
DG
DG
6
6
6
N
7
3.91
0.60
118.90
122.81
A
A
A
N1
C2
O2
DC
DC
DC
7
7
7
N
7
-6.06
1.00
110.10
104.04
A
A
A
C1'
O4'
C4'
DT
DT
DT
8
8
8
N
7
-7.69
0.80
105.90
98.21
A
A
A
O4'
C1'
C2'
DT
DT
DT
8
8
8
N
7
2.32
0.30
108.30
110.62
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
7
-4.29
0.70
108.00
103.71
A
A
A
O4'
C1'
N9
DA
DA
DA
9
9
9
N
7
3.11
0.30
108.30
111.41
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
7
3.77
0.60
118.90
122.67
A
A
A
N1
C2
O2
DC
DC
DC
10
10
10
N
7
-5.35
0.80
105.90
100.55
B
B
B
O4'
C1'
C2'
DG
DG
DG
12
12
12
N
7
6.53
0.30
108.30
114.83
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
7
-4.17
0.60
122.90
118.73
B
B
B
C6
C5
C7
DT
DT
DT
14
14
14
N
7
-5.59
0.70
108.00
102.41
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
7
-3.80
0.40
104.50
100.70
B
B
B
O4'
C4'
C3'
DG
DG
DG
16
16
16
N
7
-7.56
1.00
110.10
102.54
B
B
B
C1'
O4'
C4'
DG
DG
DG
16
16
16
N
7
-5.20
0.80
102.40
97.20
B
B
B
C3'
C2'
C1'
DA
DA
DA
17
17
17
N
7
-5.49
0.70
102.20
96.71
B
B
B
C4'
C3'
C2'
DG
DG
DG
18
18
18
N
7
1.92
0.30
108.30
110.22
B
B
B
O4'
C1'
N9
DG
DG
DG
18
18
18
N
7
7.25
1.20
119.70
126.95
B
B
B
C3'
O3'
P
DG
DG
DA
18
18
19
Y
7
9.66
1.20
115.70
125.36
B
B
B
C5'
C4'
C3'
DT
DT
DT
20
20
20
N
7
-5.12
0.70
102.20
97.08
B
B
B
C4'
C3'
C2'
DT
DT
DT
20
20
20
N
7
-5.33
0.80
102.40
97.07
B
B
B
C3'
C2'
C1'
DT
DT
DT
20
20
20
N
7
-4.86
0.60
122.90
118.04
B
B
B
C6
C5
C7
DT
DT
DT
20
20
20
N
7
9.64
1.20
119.70
129.34
B
B
B
C3'
O3'
P
DT
DT
DG
20
20
21
Y
7
10.07
1.20
119.70
129.77
B
B
B
C3'
O3'
P
DG
DG
DG
21
21
22
Y
8
-5.67
0.70
102.20
96.53
A
A
A
C4'
C3'
C2'
DC
DC
DC
1
1
1
N
8
-5.91
0.80
102.40
96.49
A
A
A
C3'
C2'
C1'
DC
DC
DC
1
1
1
N
8
-4.83
0.80
105.90
101.07
A
A
A
O4'
C1'
C2'
DC
DC
DC
2
2
2
N
8
-9.95
1.00
110.10
100.15
A
A
A
C1'
O4'
C4'
DC
DC
DC
5
5
5
N
8
-4.95
0.80
102.40
97.45
A
A
A
C3'
C2'
C1'
DC
DC
DC
5
5
5
N
8
-5.49
0.80
105.90
100.41
A
A
A
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
8
5.16
0.30
108.30
113.46
A
A
A
O4'
C1'
N9
DG
DG
DG
6
6
6
N
8
-6.86
0.80
105.90
99.04
A
A
A
O4'
C1'
C2'
DC
DC
DC
7
7
7
N
8
-7.54
0.80
105.90
98.36
A
A
A
O4'
C1'
C2'
DT
DT
DT
8
8
8
N
8
-4.45
0.70
108.00
103.55
A
A
A
O4'
C1'
N9
DA
DA
DA
9
9
9
N
8
4.56
0.30
108.30
112.86
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
8
-2.49
0.40
104.50
102.01
B
B
B
O4'
C4'
C3'
DG
DG
DG
12
12
12
N
8
-5.52
0.80
102.40
96.88
B
B
B
C3'
C2'
C1'
DG
DG
DG
12
12
12
N
8
-5.75
0.80
105.90
100.15
B
B
B
O4'
C1'
C2'
DG
DG
DG
13
13
13
N
8
-7.45
1.00
110.10
102.65
B
B
B
C1'
O4'
C4'
DA
DA
DA
15
15
15
N
8
8.42
1.20
119.70
128.12
B
B
B
C3'
O3'
P
DA
DA
DG
15
15
16
Y
8
-5.19
0.40
104.50
99.31
B
B
B
O4'
C4'
C3'
DG
DG
DG
16
16
16
N
8
3.55
0.30
108.30
111.85
B
B
B
O4'
C1'
N9
DG
DG
DG
16
16
16
N
8
-5.02
0.80
102.40
97.38
B
B
B
C3'
C2'
C1'
DA
DA
DA
17
17
17
N
8
7.65
1.20
119.70
127.35
B
B
B
C3'
O3'
P
DA
DA
DT
19
19
20
Y
8
-4.49
0.70
102.20
97.71
B
B
B
C4'
C3'
C2'
DT
DT
DT
20
20
20
N
8
-4.06
0.60
122.30
118.24
B
B
B
N3
C2
O2
DT
DT
DT
20
20
20
N
8
-5.66
0.80
102.40
96.74
B
B
B
C3'
C2'
C1'
DG
DG
DG
21
21
21
N
8
-5.52
0.80
102.40
96.88
B
B
B
C3'
C2'
C1'
DG
DG
DG
22
22
22
N
8
-4.14
0.60
119.90
115.76
B
B
B
N1
C6
O6
DG
DG
DG
22
22
22
N
8
4.14
0.60
128.60
132.74
B
B
B
C5
C6
O6
DG
DG
DG
22
22
22
N
9
-4.63
0.70
108.00
103.37
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
N
9
10.12
1.20
119.70
129.82
A
A
A
C3'
O3'
P
DC
DC
DC
1
1
2
Y
9
3.28
0.30
108.30
111.58
A
A
A
O4'
C1'
N1
DC
DC
DC
2
2
2
N
9
-5.81
0.70
108.00
102.19
A
A
A
O4'
C1'
N9
DA
DA
DA
3
3
3
N
9
-5.02
0.80
105.90
100.88
A
A
A
O4'
C1'
C2'
DC
DC
DC
5
5
5
N
9
3.00
0.30
108.30
111.30
A
A
A
O4'
C1'
N1
DC
DC
DC
5
5
5
N
9
10.77
1.60
120.90
131.67
A
A
A
P
O5'
C5'
DC
DC
DC
7
7
7
N
9
-8.65
0.70
108.00
99.35
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
9
-4.85
0.80
105.90
101.05
A
A
A
O4'
C1'
C2'
DT
DT
DT
8
8
8
N
9
-6.13
0.70
108.00
101.87
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
9
4.37
0.70
124.90
129.27
A
A
A
C5
C4
O4
DT
DT
DT
8
8
8
N
9
-5.79
0.70
108.00
102.21
A
A
A
O4'
C1'
N9
DA
DA
DA
9
9
9
N
9
-5.53
0.80
102.40
96.87
A
A
A
C3'
C2'
C1'
DC
DC
DC
10
10
10
N
9
-5.57
0.70
102.20
96.63
B
B
B
C4'
C3'
C2'
DG
DG
DG
12
12
12
N
9
-7.08
0.80
102.40
95.32
B
B
B
C3'
C2'
C1'
DG
DG
DG
12
12
12
N
9
2.06
0.30
108.30
110.36
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
9
-7.52
0.40
104.50
96.98
B
B
B
O4'
C4'
C3'
DG
DG
DG
16
16
16
N
9
-7.28
1.00
110.10
102.82
B
B
B
C1'
O4'
C4'
DG
DG
DG
16
16
16
N
9
7.25
1.20
119.70
126.95
B
B
B
C3'
O3'
P
DG
DG
DA
16
16
17
Y
9
-5.96
0.70
108.00
102.04
B
B
B
O4'
C1'
N9
DA
DA
DA
17
17
17
N
9
2.13
0.30
108.30
110.43
B
B
B
O4'
C1'
N9
DG
DG
DG
18
18
18
N
9
8.21
1.20
119.70
127.91
B
B
B
C3'
O3'
P
DG
DG
DA
18
18
19
Y
9
10.19
1.60
120.90
131.09
B
B
B
P
O5'
C5'
DA
DA
DA
19
19
19
N
9
-6.59
0.70
108.00
101.41
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
9
-6.09
0.80
105.90
99.81
B
B
B
O4'
C1'
C2'
DG
DG
DG
21
21
21
N
1
A
A
C5
C7
DT
DT
4
4
0.063
0.006
1.496
1.559
N
1
B
B
C5'
C4'
DG
DG
12
12
0.042
0.007
1.512
1.554
N
1
B
B
C2'
C1'
DA
DA
17
17
0.069
0.010
1.519
1.588
N
1
B
B
C5
C7
DT
DT
20
20
0.041
0.006
1.496
1.537
N
2
A
A
C5
C7
DT
DT
4
4
0.064
0.006
1.496
1.560
N
2
A
A
C5
C7
DT
DT
8
8
0.062
0.006
1.496
1.558
N
2
B
B
C5
C7
DT
DT
14
14
0.067
0.006
1.496
1.563
N
2
B
B
C5
C7
DT
DT
20
20
0.053
0.006
1.496
1.549
N
3
A
A
C5'
C4'
DT
DT
4
4
0.044
0.007
1.512
1.556
N
3
A
A
C5
C7
DT
DT
4
4
0.049
0.006
1.496
1.545
N
3
A
A
C5
C7
DT
DT
8
8
0.052
0.006
1.496
1.548
N
3
B
B
C5
C7
DT
DT
14
14
0.042
0.006
1.496
1.538
N
4
A
A
C5
C7
DT
DT
4
4
0.057
0.006
1.496
1.553
N
4
A
A
C5
C7
DT
DT
8
8
0.052
0.006
1.496
1.548
N
4
A
A
C5'
C4'
DC
DC
11
11
0.043
0.007
1.512
1.555
N
4
B
B
C5
C7
DT
DT
20
20
0.060
0.006
1.496
1.556
N
5
A
A
C5
C7
DT
DT
4
4
0.048
0.006
1.496
1.544
N
5
A
A
C5
C7
DT
DT
8
8
0.050
0.006
1.496
1.546
N
5
B
B
C5'
C4'
DA
DA
19
19
0.046
0.007
1.512
1.558
N
5
B
B
C5
C7
DT
DT
20
20
0.052
0.006
1.496
1.548
N
6
A
A
C5'
C4'
DT
DT
4
4
0.052
0.007
1.512
1.564
N
6
A
A
C5
C7
DT
DT
4
4
0.053
0.006
1.496
1.549
N
6
A
A
C5
C7
DT
DT
8
8
0.046
0.006
1.496
1.542
N
6
B
B
C5
C7
DT
DT
20
20
0.042
0.006
1.496
1.538
N
7
A
A
C5'
C4'
DC
DC
2
2
0.052
0.007
1.512
1.564
N
7
A
A
C5
C7
DT
DT
4
4
0.055
0.006
1.496
1.551
N
7
B
B
C5'
C4'
DT
DT
20
20
0.045
0.007
1.512
1.557
N
8
A
A
C5
C7
DT
DT
4
4
0.056
0.006
1.496
1.552
N
8
A
A
C5
C7
DT
DT
8
8
0.037
0.006
1.496
1.533
N
8
B
B
C5
C7
DT
DT
20
20
0.051
0.006
1.496
1.547
N
9
A
A
C5
C7
DT
DT
4
4
0.041
0.006
1.496
1.537
N
9
A
A
C5
C7
DT
DT
8
8
0.037
0.006
1.496
1.533
N
9
B
B
C5
C7
DT
DT
14
14
0.051
0.006
1.496
1.547
N
9
B
B
C5
C7
DT
DT
20
20
0.072
0.006
1.496
1.568
N
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
phasing
X-PLOR
3.1
SOLUTION NMR STRUCTURE OF THE [AP]DG ADDUCT OPPOSITE DA IN A DNA DUPLEX, NMR, 9 STRUCTURES
1
N
N
2
N
N
3
N
N
covale
1.481
none
A
DG
6
A
C8
DG
6
1_555
A
AP
23
C
N1
AP
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
B
DG
22
B
N1
DG
11
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
B
DG
22
B
O6
DG
11
1_555
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
B
DG
22
B
N2
DG
11
1_555
hydrog
WATSON-CRICK
A
DC
2
A
N3
DC
2
1_555
B
DG
21
B
N1
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
2
A
N4
DC
2
1_555
B
DG
21
B
O6
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
2
A
O2
DC
2
1_555
B
DG
21
B
N2
DG
10
1_555
hydrog
WATSON-CRICK
A
DA
3
A
N1
DA
3
1_555
B
DT
20
B
N3
DT
9
1_555
hydrog
WATSON-CRICK
A
DA
3
A
N6
DA
3
1_555
B
DT
20
B
O4
DT
9
1_555
hydrog
WATSON-CRICK
A
DT
4
A
N3
DT
4
1_555
B
DA
19
B
N1
DA
8
1_555
hydrog
WATSON-CRICK
A
DT
4
A
O4
DT
4
1_555
B
DA
19
B
N6
DA
8
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N3
DC
5
1_555
B
DG
18
B
N1
DG
7
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N4
DC
5
1_555
B
DG
18
B
O6
DG
7
1_555
hydrog
WATSON-CRICK
A
DC
5
A
O2
DC
5
1_555
B
DG
18
B
N2
DG
7
1_555
hydrog
DC-DA MISPAIR
A
DC
7
A
N4
DC
7
1_555
B
DA
15
B
N1
DA
4
1_555
hydrog
WATSON-CRICK
A
DC
7
A
N3
DC
7
1_555
B
DG
16
B
N1
DG
5
1_555
hydrog
WATSON-CRICK
A
DC
7
A
N4
DC
7
1_555
B
DG
16
B
O6
DG
5
1_555
hydrog
WATSON-CRICK
A
DC
7
A
O2
DC
7
1_555
B
DG
16
B
N2
DG
5
1_555
hydrog
WATSON-CRICK
A
DT
8
A
N3
DT
8
1_555
B
DA
15
B
N1
DA
4
1_555
hydrog
WATSON-CRICK
A
DT
8
A
O4
DT
8
1_555
B
DA
15
B
N6
DA
4
1_555
hydrog
WATSON-CRICK
A
DA
9
A
N1
DA
9
1_555
B
DT
14
B
N3
DT
3
1_555
hydrog
WATSON-CRICK
A
DA
9
A
N6
DA
9
1_555
B
DT
14
B
O4
DT
3
1_555
hydrog
WATSON-CRICK
A
DC
10
A
N3
DC
10
1_555
B
DG
13
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
10
A
N4
DC
10
1_555
B
DG
13
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
10
A
O2
DC
10
1_555
B
DG
13
B
N2
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N3
DC
11
1_555
B
DG
12
B
N1
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N4
DC
11
1_555
B
DG
12
B
O6
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
11
A
O2
DC
11
1_555
B
DG
12
B
N2
DG
1
1_555
DNA
DNA DUPLEX, AMINOPYRENE ADDUCT, CARCINOGEN ADDUCT, DNA
1AXU
PDB
1
1AXU
1AXU
PDB
2
1AXU
1
11
1AXU
1
11
1AXU
A
1
1
11
12
22
1AXU
12
22
1AXU
B
2
1
11
BINDING SITE FOR RESIDUE AP A 23
A
AP
23
Software
5
A
DG
6
A
DG
6
5
1_555
A
DC
7
A
DC
7
5
1_555
B
DG
16
B
DG
5
5
1_555
B
DA
17
B
DA
6
5
1_555
B
DG
18
B
DG
7
5
1_555
1
P 1