1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Arnesano, F.
Banci, L.
Bertini, I.
Felli, I.C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C34 H32 Fe N4 O4
616.487
PROTOPORPHYRIN IX CONTAINING FE
HEME
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
37
173
184
10.1021/bi971896w
9425037
The solution structure of oxidized rat microsomal cytochrome b5.
1998
10.2210/pdb1axx/pdb
pdb_00001axx
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
FROM RAT MICROSOMAL MEMBRANE
10813.908
CYTOCHROME B5
SOLUBLE DOMAIN
1
man
polymer
616.487
PROTOPORPHYRIN IX CONTAINING FE
1
syn
non-polymer
no
no
DKDVKYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGELH
PDDRSKIAKPSETL
DKDVKYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGELH
PDDRSKIAKPSETL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Norway rat
Rattus
Escherichia
sample
10116
LIVER
MICROSOME
Rattus norvegicus
CYTOPLASM
562
Escherichia coli
NM522
PLASMID
PUC 13
database_2
pdbx_database_status
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Other
1
0
1998-03-04
1
1
2008-03-24
1
2
2011-07-13
1
3
2022-03-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_pdbx_nmr_software.name
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1997-10-22
REL
HEM
PROTOPORPHYRIN IX CONTAINING FE
FAMILY OF MINIMIZED STRUCTURES
40
19
NOESY
TOCSY
1D NOE
1 mM PHOSPHATE
7
1
atm
298
K
PSEUDOREM (BANCI,BERTINI, GORI SAVELLINI,ROMAGNOLI,TURANO,CREMONINI,LUCHINAT, GRAY) ALSO WAS USED.
TORSION ANGLE MOLECULAR DYNAMICS SIMULATED ANNEALING, RESTRAINED ENERGY MINIMIZATION; PSEUDOCONTACT SHIFTS WERE USED IN THE CALCULATION AND IN THE MINIMIZATION AS FURTHER NON-CLASSICAL CONSTRAINTS
PEARLMAN,CASE,CALDWELL,ROSS,CHEATHAM, FERGUSON,SEIBEL,SINGH,WEINER,KOLLMAN
refinement
Amber
structure solution
DYANA
structure solution
PSEUDYANA
structure solution
Amber
800
Bruker
AVANCE 800 MHZ
HEM
96
2
HEM
HEM
96
A
ASP
1
n
1
ASP
1
A
LYS
2
n
2
LYS
2
A
ASP
3
n
3
ASP
3
A
VAL
4
n
4
VAL
4
A
LYS
5
n
5
LYS
5
A
TYR
6
n
6
TYR
6
A
TYR
7
n
7
TYR
7
A
THR
8
n
8
THR
8
A
LEU
9
n
9
LEU
9
A
GLU
10
n
10
GLU
10
A
GLU
11
n
11
GLU
11
A
ILE
12
n
12
ILE
12
A
GLN
13
n
13
GLN
13
A
LYS
14
n
14
LYS
14
A
HIS
15
n
15
HIS
15
A
LYS
16
n
16
LYS
16
A
ASP
17
n
17
ASP
17
A
SER
18
n
18
SER
18
A
LYS
19
n
19
LYS
19
A
SER
20
n
20
SER
20
A
THR
21
n
21
THR
21
A
TRP
22
n
22
TRP
22
A
VAL
23
n
23
VAL
23
A
ILE
24
n
24
ILE
24
A
LEU
25
n
25
LEU
25
A
HIS
26
n
26
HIS
26
A
HIS
27
n
27
HIS
27
A
LYS
28
n
28
LYS
28
A
VAL
29
n
29
VAL
29
A
TYR
30
n
30
TYR
30
A
ASP
31
n
31
ASP
31
A
LEU
32
n
32
LEU
32
A
THR
33
n
33
THR
33
A
LYS
34
n
34
LYS
34
A
PHE
35
n
35
PHE
35
A
LEU
36
n
36
LEU
36
A
GLU
37
n
37
GLU
37
A
GLU
38
n
38
GLU
38
A
HIS
39
n
39
HIS
39
A
PRO
40
n
40
PRO
40
A
GLY
41
n
41
GLY
41
A
GLY
42
n
42
GLY
42
A
GLU
43
n
43
GLU
43
A
GLU
44
n
44
GLU
44
A
VAL
45
n
45
VAL
45
A
LEU
46
n
46
LEU
46
A
ARG
47
n
47
ARG
47
A
GLU
48
n
48
GLU
48
A
GLN
49
n
49
GLN
49
A
ALA
50
n
50
ALA
50
A
GLY
51
n
51
GLY
51
A
GLY
52
n
52
GLY
52
A
ASP
53
n
53
ASP
53
A
ALA
54
n
54
ALA
54
A
THR
55
n
55
THR
55
A
GLU
56
n
56
GLU
56
A
ASN
57
n
57
ASN
57
A
PHE
58
n
58
PHE
58
A
GLU
59
n
59
GLU
59
A
ASP
60
n
60
ASP
60
A
VAL
61
n
61
VAL
61
A
GLY
62
n
62
GLY
62
A
HIS
63
n
63
HIS
63
A
SER
64
n
64
SER
64
A
THR
65
n
65
THR
65
A
ASP
66
n
66
ASP
66
A
ALA
67
n
67
ALA
67
A
ARG
68
n
68
ARG
68
A
GLU
69
n
69
GLU
69
A
LEU
70
n
70
LEU
70
A
SER
71
n
71
SER
71
A
LYS
72
n
72
LYS
72
A
THR
73
n
73
THR
73
A
TYR
74
n
74
TYR
74
A
ILE
75
n
75
ILE
75
A
ILE
76
n
76
ILE
76
A
GLY
77
n
77
GLY
77
A
GLU
78
n
78
GLU
78
A
LEU
79
n
79
LEU
79
A
HIS
80
n
80
HIS
80
A
PRO
81
n
81
PRO
81
A
ASP
82
n
82
ASP
82
A
ASP
83
n
83
ASP
83
A
ARG
84
n
84
ARG
84
A
SER
85
n
85
SER
85
A
LYS
86
n
86
LYS
86
A
ILE
87
n
87
ILE
87
A
ALA
88
n
88
ALA
88
A
LYS
89
n
89
LYS
89
A
PRO
90
n
90
PRO
90
A
SER
91
n
91
SER
91
A
GLU
92
n
92
GLU
92
A
THR
93
n
93
THR
93
A
LEU
94
n
94
LEU
94
A
author_defined_assembly
1
monomeric
A
HIS
39
A
NE2
HIS
39
1_555
A
HEM
96
B
FE
HEM
1_555
A
HEM
96
B
NA
HEM
1_555
90.7
A
HIS
39
A
NE2
HIS
39
1_555
A
HEM
96
B
FE
HEM
1_555
A
HEM
96
B
NB
HEM
1_555
91.7
A
HEM
96
B
NA
HEM
1_555
A
HEM
96
B
FE
HEM
1_555
A
HEM
96
B
NB
HEM
1_555
88.8
A
HIS
39
A
NE2
HIS
39
1_555
A
HEM
96
B
FE
HEM
1_555
A
HEM
96
B
NC
HEM
1_555
89.5
A
HEM
96
B
NA
HEM
1_555
A
HEM
96
B
FE
HEM
1_555
A
HEM
96
B
NC
HEM
1_555
179.5
A
HEM
96
B
NB
HEM
1_555
A
HEM
96
B
FE
HEM
1_555
A
HEM
96
B
NC
HEM
1_555
90.7
A
HIS
39
A
NE2
HIS
39
1_555
A
HEM
96
B
FE
HEM
1_555
A
HEM
96
B
ND
HEM
1_555
88.2
A
HEM
96
B
NA
HEM
1_555
A
HEM
96
B
FE
HEM
1_555
A
HEM
96
B
ND
HEM
1_555
91.2
A
HEM
96
B
NB
HEM
1_555
A
HEM
96
B
FE
HEM
1_555
A
HEM
96
B
ND
HEM
1_555
179.9
A
HEM
96
B
NC
HEM
1_555
A
HEM
96
B
FE
HEM
1_555
A
HEM
96
B
ND
HEM
1_555
89.3
A
HIS
39
A
NE2
HIS
39
1_555
A
HEM
96
B
FE
HEM
1_555
A
HIS
63
A
NE2
HIS
63
1_555
175.2
A
HEM
96
B
NA
HEM
1_555
A
HEM
96
B
FE
HEM
1_555
A
HIS
63
A
NE2
HIS
63
1_555
92.2
A
HEM
96
B
NB
HEM
1_555
A
HEM
96
B
FE
HEM
1_555
A
HIS
63
A
NE2
HIS
63
1_555
92.2
A
HEM
96
B
NC
HEM
1_555
A
HEM
96
B
FE
HEM
1_555
A
HIS
63
A
NE2
HIS
63
1_555
87.6
A
HEM
96
B
ND
HEM
1_555
A
HEM
96
B
FE
HEM
1_555
A
HIS
63
A
NE2
HIS
63
1_555
87.9
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
VAL
23
A
O
VAL
23
A
N
TYR
30
A
N
TYR
30
A
O
VAL
29
A
O
VAL
29
A
N
GLY
77
A
N
GLY
77
A
O
GLU
78
A
O
GLU
78
A
N
TYR
7
A
N
TYR
7
1
A
CA
ASP
1
WRONG HAND
3
A
CA
ASP
1
WRONG HAND
7
A
CA
ASP
1
WRONG HAND
8
A
CA
ASP
1
WRONG HAND
10
A
CA
ASP
1
WRONG HAND
11
A
CA
ASP
1
WRONG HAND
12
A
CA
ASP
1
WRONG HAND
15
A
CA
ASP
1
WRONG HAND
1
A
TYR
30
0.119
SIDE CHAIN
1
A
TYR
74
0.100
SIDE CHAIN
2
A
TYR
74
0.082
SIDE CHAIN
3
A
TYR
74
0.089
SIDE CHAIN
4
A
TYR
6
0.074
SIDE CHAIN
6
A
TYR
74
0.104
SIDE CHAIN
7
A
TYR
30
0.075
SIDE CHAIN
7
A
TYR
74
0.092
SIDE CHAIN
8
A
TYR
74
0.089
SIDE CHAIN
9
A
TYR
6
0.104
SIDE CHAIN
9
A
TYR
74
0.090
SIDE CHAIN
10
A
TYR
6
0.103
SIDE CHAIN
11
A
TYR
30
0.112
SIDE CHAIN
11
A
TYR
74
0.089
SIDE CHAIN
12
A
TYR
30
0.081
SIDE CHAIN
13
A
TYR
6
0.087
SIDE CHAIN
14
A
TYR
6
0.089
SIDE CHAIN
14
A
TYR
74
0.082
SIDE CHAIN
15
A
TYR
30
0.069
SIDE CHAIN
16
A
TYR
74
0.077
SIDE CHAIN
17
A
TYR
7
0.072
SIDE CHAIN
17
A
TYR
30
0.078
SIDE CHAIN
17
A
TYR
74
0.092
SIDE CHAIN
18
A
TYR
30
0.064
SIDE CHAIN
19
A
TYR
74
0.075
SIDE CHAIN
4
21.91
1.80
110.60
132.51
A
A
A
N
CA
CB
ASP
ASP
ASP
1
1
1
N
9
15.95
2.00
110.40
126.35
A
A
A
CB
CA
C
ASP
ASP
ASP
1
1
1
N
9
-12.07
1.80
110.60
98.53
A
A
A
N
CA
CB
ASP
ASP
ASP
1
1
1
N
9
-18.54
2.70
111.00
92.46
A
A
A
N
CA
C
ASP
ASP
ASP
1
1
1
N
1
A
ASP
3
-58.81
177.57
1
A
VAL
4
-74.17
-125.18
1
A
LYS
16
-152.28
49.16
1
A
SER
18
56.50
-83.06
1
A
LYS
19
-159.54
42.39
1
A
HIS
26
58.70
-163.30
1
A
PRO
40
-69.12
78.00
1
A
GLN
49
-96.23
-68.90
1
A
ALA
50
59.20
153.90
1
A
HIS
63
65.22
150.07
1
A
ASP
83
-82.43
34.51
2
A
VAL
4
-101.77
-152.84
2
A
LYS
16
-154.58
44.84
2
A
SER
18
68.70
-77.04
2
A
LYS
19
-172.42
65.72
2
A
GLN
49
-94.21
-69.25
2
A
ALA
50
56.58
154.48
2
A
ASP
53
-64.44
72.64
2
A
LYS
86
-83.14
46.62
3
A
LYS
2
-78.15
-71.47
3
A
ASP
3
51.93
-145.29
3
A
VAL
4
-87.84
-100.20
3
A
LYS
5
-150.11
37.28
3
A
TYR
6
-37.06
114.07
3
A
SER
18
53.21
-150.39
3
A
GLN
49
-103.36
-63.88
3
A
ALA
50
58.91
165.77
3
A
ASP
53
-63.88
83.00
3
A
HIS
63
-47.08
155.24
3
A
ASP
82
-29.70
-56.91
4
A
LYS
2
66.86
161.12
4
A
ASP
3
61.46
-167.58
4
A
VAL
4
-92.05
-117.45
4
A
LYS
16
-143.53
58.12
4
A
SER
18
-67.77
70.12
4
A
LYS
19
-171.34
-46.48
4
A
HIS
26
58.27
-83.40
4
A
HIS
27
-147.64
31.78
4
A
ALA
50
-41.19
150.98
4
A
ASP
53
-68.26
94.81
4
A
LYS
86
-146.32
55.83
4
A
GLU
92
41.82
-158.49
5
A
ASP
3
47.43
-142.74
5
A
VAL
4
-75.77
-101.96
5
A
LYS
5
-143.73
43.67
5
A
LYS
16
-154.90
-45.70
5
A
SER
18
71.67
-61.38
5
A
LYS
19
171.49
-26.65
5
A
SER
20
-66.68
71.58
5
A
PRO
40
-69.93
79.16
5
A
GLN
49
-96.25
-67.32
5
A
ALA
50
58.62
160.32
5
A
ASP
53
-69.07
90.25
5
A
HIS
63
67.11
159.58
5
A
ILE
87
33.07
84.87
6
A
LYS
2
-112.50
-102.34
6
A
VAL
4
-105.34
-154.61
6
A
LYS
5
-112.69
65.37
6
A
LYS
16
-151.42
32.93
6
A
SER
20
-156.72
54.85
6
A
HIS
27
68.47
-52.11
6
A
HIS
63
65.94
160.68
6
A
LYS
86
-158.35
39.60
6
A
ALA
88
-119.41
-74.48
6
A
LYS
89
-162.27
118.46
6
A
SER
91
66.74
-74.38
6
A
GLU
92
-174.65
-52.45
6
A
THR
93
-154.49
65.85
7
A
VAL
4
-82.62
-141.38
7
A
LYS
5
-171.37
59.09
7
A
TYR
6
-31.54
113.27
7
A
LYS
19
-161.52
-63.91
7
A
GLN
49
-91.15
-74.57
7
A
ALA
50
62.25
154.48
7
A
ASP
53
-67.30
99.76
7
A
HIS
63
65.13
163.32
7
A
LYS
86
-176.66
-63.70
7
A
ILE
87
40.96
73.75
7
A
LYS
89
-29.72
97.51
7
A
GLU
92
-57.73
107.76
8
A
VAL
4
-83.22
-108.73
8
A
LYS
16
-154.30
32.44
8
A
ASP
17
-87.49
-90.14
8
A
SER
20
-166.48
91.26
8
A
HIS
26
61.32
-168.14
8
A
HIS
27
-65.87
78.63
8
A
LYS
28
175.62
161.77
8
A
PRO
40
-69.93
79.57
8
A
GLN
49
-97.60
-66.35
8
A
ALA
50
57.47
163.84
8
A
ASP
53
-67.05
74.72
8
A
HIS
63
65.92
142.66
8
A
SER
64
-173.93
-174.37
8
A
ASP
66
171.31
-76.38
8
A
ILE
76
-140.34
34.02
8
A
SER
85
-79.51
29.89
8
A
LYS
86
-169.71
34.24
9
A
LYS
2
-161.73
48.42
9
A
ASP
3
-165.28
-168.91
9
A
VAL
4
-75.14
-122.62
9
A
HIS
15
-66.53
77.08
9
A
LYS
16
-153.69
46.97
9
A
SER
18
-82.56
47.17
9
A
LYS
19
-169.63
-63.49
9
A
GLN
49
-98.47
-67.09
9
A
ALA
50
60.29
159.36
9
A
ASP
53
-62.98
78.11
9
A
HIS
63
67.84
142.26
9
A
ALA
88
57.43
-161.58
9
A
THR
93
63.37
-74.52
10
A
LYS
2
59.95
81.25
10
A
VAL
4
-75.70
-149.76
10
A
LYS
5
-166.51
74.29
10
A
LYS
16
-158.29
30.14
10
A
SER
18
63.52
-73.87
10
A
LYS
19
-161.61
-33.28
10
A
SER
20
-64.93
70.21
10
A
HIS
27
59.63
17.60
10
A
ALA
50
-38.55
139.85
10
A
SER
85
-80.64
44.31
10
A
LYS
86
-156.02
-61.40
10
A
ILE
87
43.09
77.78
10
A
SER
91
-164.84
-68.04
10
A
GLU
92
66.71
138.99
11
A
VAL
4
-79.09
-147.68
11
A
ILE
12
-85.28
43.69
11
A
HIS
15
-69.49
86.77
11
A
LYS
16
-157.93
-45.47
11
A
SER
18
59.91
-152.32
11
A
SER
20
-107.21
64.39
11
A
HIS
26
65.87
-165.44
11
A
LYS
28
177.36
134.23
11
A
GLN
49
-105.05
-64.80
11
A
ALA
50
57.15
170.50
11
A
HIS
63
64.69
157.02
11
A
ASP
83
-102.25
46.21
11
A
ILE
87
-36.03
106.56
12
A
ASP
3
-141.90
-69.76
12
A
VAL
4
-84.33
-140.67
12
A
LYS
5
-140.95
59.78
12
A
SER
18
63.38
-158.92
12
A
GLN
49
-95.53
-69.54
12
A
ALA
50
57.77
162.43
12
A
ASP
53
-63.50
80.80
12
A
HIS
63
64.94
154.64
12
A
LYS
86
-163.05
34.76
13
A
LYS
2
61.00
103.54
13
A
ASP
3
60.36
-84.23
13
A
VAL
4
-92.53
-138.07
13
A
LYS
16
-172.57
-41.24
13
A
SER
18
75.54
-147.34
13
A
HIS
26
59.66
-89.45
13
A
HIS
27
-146.37
20.87
13
A
GLN
49
-99.00
-64.75
13
A
ALA
50
56.27
173.53
13
A
ASP
53
-68.04
74.44
13
A
HIS
63
66.56
159.74
13
A
LYS
89
49.31
88.88
14
A
ASP
3
57.41
-162.41
14
A
HIS
15
-90.03
48.27
14
A
LYS
19
-85.13
34.91
14
A
HIS
26
63.24
-155.29
14
A
LYS
28
-174.37
138.50
14
A
PRO
40
-69.88
77.45
14
A
GLN
49
-90.63
-70.82
14
A
ALA
50
52.92
169.83
14
A
HIS
63
67.81
156.50
14
A
HIS
80
-37.93
130.91
14
A
LYS
86
-156.33
31.02
14
A
GLU
92
69.20
157.30
15
A
LYS
2
57.49
-176.44
15
A
ASP
3
69.17
98.52
15
A
VAL
4
-79.77
-156.59
15
A
HIS
15
-64.94
80.09
15
A
LYS
16
-136.67
-74.87
15
A
ASP
17
53.38
-155.25
15
A
LYS
19
-148.46
-56.33
15
A
SER
20
-69.26
63.89
15
A
HIS
26
63.31
-163.69
15
A
LYS
28
174.58
143.55
15
A
GLN
49
-93.48
-71.39
15
A
ALA
50
54.62
148.03
15
A
HIS
63
66.95
162.84
15
A
LYS
86
-157.48
71.03
16
A
ASP
3
-56.80
93.54
16
A
VAL
4
-134.93
-96.96
16
A
LYS
16
-165.86
-29.85
16
A
ASP
17
-55.81
174.15
16
A
LYS
19
-163.93
-49.06
16
A
GLN
49
-81.19
-74.28
16
A
ALA
50
55.63
175.74
16
A
HIS
63
67.66
161.44
17
A
ASP
3
-151.82
-84.26
17
A
VAL
4
-97.50
-141.91
17
A
LYS
16
-159.61
38.32
17
A
ASP
17
-102.03
-87.86
17
A
SER
20
-167.00
76.67
17
A
HIS
39
-49.44
108.84
17
A
GLN
49
-109.14
-65.33
17
A
ALA
50
54.78
163.70
17
A
HIS
63
-48.05
152.32
17
A
PRO
90
-75.34
-168.83
17
A
THR
93
50.30
-153.89
18
A
LYS
2
172.84
102.26
18
A
VAL
4
56.58
-81.18
18
A
LYS
5
173.53
50.91
18
A
LYS
16
-120.18
-55.81
18
A
SER
18
-59.17
77.29
18
A
LYS
19
-160.46
-65.08
18
A
ALA
50
-40.77
150.17
18
A
ASP
53
-164.22
49.69
18
A
LYS
86
-127.86
-62.71
18
A
ILE
87
39.63
85.00
19
A
LYS
2
176.97
158.14
19
A
ASP
3
-65.12
-177.36
19
A
VAL
4
-71.02
-95.57
19
A
LYS
16
-156.56
77.99
19
A
ASP
17
-139.22
-89.11
19
A
SER
20
-168.72
89.29
19
A
ILE
24
-108.60
57.57
19
A
HIS
26
64.89
-161.52
19
A
GLN
49
-77.97
-77.73
19
A
ALA
50
48.56
169.87
19
A
HIS
63
65.03
158.89
19
A
LYS
86
-142.36
-41.18
19
A
LYS
89
70.69
100.60
19
A
THR
93
-148.77
47.50
model building
DYANA
refinement
AMBER
refinement
DYANA
THE SOLUTION STRUCTURE OF OXIDIZED RAT MICROSOMAL CYTOCHROME B5, NMR, 19 STRUCTURES
1
Y
N
2
N
N
A
THR
8
A
THR
8
HELX_P
A
LYS
14
A
LYS
14
1
1
7
A
THR
33
A
THR
33
HELX_P
A
HIS
39
A
HIS
39
5
2
7
A
GLY
42
A
GLY
42
HELX_P
A
ALA
50
A
ALA
50
1
3
9
A
ALA
54
A
ALA
54
HELX_P
A
GLY
62
A
GLY
62
1
4
9
A
SER
64
A
SER
64
HELX_P
A
TYR
74
A
TYR
74
1
5
11
A
PRO
81
A
PRO
81
HELX_P
A
ILE
87
A
ILE
87
1
6
7
metalc
1.986
A
HIS
39
A
NE2
HIS
39
1_555
A
HEM
96
B
FE
HEM
1_555
metalc
2.001
A
HIS
63
A
NE2
HIS
63
1_555
A
HEM
96
B
FE
HEM
1_555
ELECTRON TRANSPORT
CYTOCHROME B5, PROTEIN RECOGNITION, ELECTRON TRANSPORT, SOLUTION STRUCTURE, PARAMAGNETIC NMR
CYB5_RAT
UNP
1
1
P00173
AEQSDKDVKYYTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYII
GELHPDDRSKIAKPSETLITTVESNSSWWTNWVIPAISALVVALMYRLYMAED
5
98
1AXX
1
94
P00173
A
1
1
94
4
anti-parallel
anti-parallel
parallel
A
THR
21
A
THR
21
A
LEU
25
A
LEU
25
A
LYS
28
A
LYS
28
A
LEU
32
A
LEU
32
A
ILE
75
A
ILE
75
A
GLU
78
A
GLU
78
A
LYS
5
A
LYS
5
A
TYR
7
A
TYR
7
HEME SITE
Unknown
2
BINDING SITE FOR RESIDUE HEM A 96
A
HEM
96
Software
13
A
HIS
39
A
HIS
39
2
1_555
A
HIS
63
A
HIS
63
2
1_555
A
LEU
25
A
LEU
25
13
1_555
A
LEU
32
A
LEU
32
13
1_555
A
PHE
35
A
PHE
35
13
1_555
A
HIS
39
A
HIS
39
13
1_555
A
PRO
40
A
PRO
40
13
1_555
A
GLY
41
A
GLY
41
13
1_555
A
VAL
45
A
VAL
45
13
1_555
A
LEU
46
A
LEU
46
13
1_555
A
ASN
57
A
ASN
57
13
1_555
A
HIS
63
A
HIS
63
13
1_555
A
SER
64
A
SER
64
13
1_555
A
ALA
67
A
ALA
67
13
1_555
A
SER
71
A
SER
71
13
1_555
1
P 1