0.007838
0.000000
0.000000
0.000000
0.008259
0.000000
0.000000
0.000000
0.037230
0.00000
0.00000
0.00000
Forest, K.T.
Parge, H.E.
Tainer, J.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
127.580
121.080
26.860
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C6 H12 O6
180.156
alpha-D-galactopyranose
alpha-D-galactose; D-galactose; galactose; ALPHA D-GALACTOSE
D-saccharide, alpha linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C7 H16 O3
148.200
HEPTANE-1,2,3-TRIOL
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
Pt 2
195.078
PLATINUM (II) ION
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Nature
NATUAS
0006
0028-0836
378
32
38
10.1038/378032a0
7477282
Structure of the fibre-forming protein pilin at 2.6 A resolution.
1995
10.2210/pdb1ay2/pdb
pdb_00001ay2
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
290
1
BENT MIRROR
IMAGE PLATE
1993-05
MARRESEARCH
SI(111)
M
x-ray
1
1.07
1.0
BL7-1
SSRL
1.07
SYNCHROTRON
SSRL BEAMLINE BL7-1
17192.477
TYPE 4 PILIN
1
nat
polymer
383.349
alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
branched
195.078
PLATINUM (II) ION
1
syn
non-polymer
148.200
HEPTANE-1,2,3-TRIOL
1
syn
non-polymer
18.015
water
129
nat
water
FIMBRIAE
no
no
FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASPPSDIKGKYVKE
VEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFDAK
FTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASPPSDIKGKYVKE
VEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRDNFDAK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
EXTRACELLULAR
485
PILUS
Neisseria gonorrhoeae
MS11
1
3.16
60.
8.0
PROTEIN WAS CRYSTALLIZED FROM 60% PEG400, 50 MM CHESS, PH 8.0, 1% BETA-OCTYL GLUCOSIDE, 0.6% 1,2,3-HEPTANETRIOL.
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_struct_conn_angle
pdbx_struct_special_symmetry
software
struct_asym
struct_conn
struct_site
struct_site_gen
atom_site
chem_comp
database_2
entity
entity_poly
entity_poly_seq
pdbx_poly_seq_scheme
pdbx_struct_mod_residue
pdbx_unobs_or_zero_occ_atoms
pdbx_validate_rmsd_angle
struct_conn
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Atomic model
Data collection
Derived calculations
Refinement description
Structure summary
Advisory
Atomic model
Data collection
Database references
Derived calculations
Non-polymer description
Polymer sequence
Structure summary
1
0
1998-04-29
1
1
2008-03-24
1
2
2011-07-13
2
0
2020-07-29
3
0
2023-02-15
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.occupancy
_atom_site.type_symbol
_chem_comp.name
_chem_comp.type
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_special_symmetry.label_asym_id
_software.name
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_symmetry
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.group_PDB
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.type_symbol
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.id
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.type
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_entity.formula_weight
_entity_poly.nstd_monomer
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
_entity_poly_seq.mon_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_struct_mod_residue.auth_comp_id
_pdbx_struct_mod_residue.label_comp_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_label_comp_id
NAG
161
n
B
NAG
1
GAL
160
n
B
GLA
2
DGalpa
a-D-galactopyranose
a-D-Galp
Gal
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
Y
BNL
1997-11-13
REL
REL
oligosaccharide
DGalpa1-3DGlcpNAcb1-
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/2,2,1/[a2122h-1b_1-5_2*NCC/3=O][a2112h-1a_1-5]/1-2/a3-b1
2
PDB2Glycan
1.1.0
WURCS
[]{[(3+1)][b-D-GlcpNAc]{[(3+1)][a-D-Galp]{}}}
2
PDB-CARE
LINUCS
C1
O3
GLA
NAG
2
1
2
O1
HO3
sing
n
n
PT
PLATINUM (II) ION
HTO
HEPTANE-1,2,3-TRIOL
HOH
water
PT
200
3
PT
PT
200
A
HTO
162
4
HTO
HTO
162
A
HOH
301
5
HOH
HOH
301
A
HOH
303
5
HOH
HOH
303
A
HOH
307
5
HOH
HOH
307
A
HOH
308
5
HOH
HOH
308
A
HOH
310
5
HOH
HOH
310
A
HOH
311
5
HOH
HOH
311
A
HOH
314
5
HOH
HOH
314
A
HOH
315
5
HOH
HOH
315
A
HOH
317
5
HOH
HOH
317
A
HOH
322
5
HOH
HOH
322
A
HOH
323
5
HOH
HOH
323
A
HOH
324
5
HOH
HOH
324
A
HOH
325
5
HOH
HOH
325
A
HOH
326
5
HOH
HOH
326
A
HOH
328
5
HOH
HOH
328
A
HOH
333
5
HOH
HOH
333
A
HOH
334
5
HOH
HOH
334
A
HOH
335
5
HOH
HOH
335
A
HOH
336
5
HOH
HOH
336
A
HOH
338
5
HOH
HOH
338
A
HOH
340
5
HOH
HOH
340
A
HOH
341
5
HOH
HOH
341
A
HOH
343
5
HOH
HOH
343
A
HOH
344
5
HOH
HOH
344
A
HOH
345
5
HOH
HOH
345
A
HOH
346
5
HOH
HOH
346
A
HOH
347
5
HOH
HOH
347
A
HOH
348
5
HOH
HOH
348
A
HOH
352
5
HOH
HOH
352
A
HOH
353
5
HOH
HOH
353
A
HOH
354
5
HOH
HOH
354
A
HOH
355
5
HOH
HOH
355
A
HOH
356
5
HOH
HOH
356
A
HOH
357
5
HOH
HOH
357
A
HOH
358
5
HOH
HOH
358
A
HOH
359
5
HOH
HOH
359
A
HOH
361
5
HOH
HOH
361
A
HOH
362
5
HOH
HOH
362
A
HOH
364
5
HOH
HOH
364
A
HOH
365
5
HOH
HOH
365
A
HOH
366
5
HOH
HOH
366
A
HOH
367
5
HOH
HOH
367
A
HOH
371
5
HOH
HOH
371
A
HOH
372
5
HOH
HOH
372
A
HOH
375
5
HOH
HOH
375
A
HOH
376
5
HOH
HOH
376
A
HOH
377
5
HOH
HOH
377
A
HOH
378
5
HOH
HOH
378
A
HOH
381
5
HOH
HOH
381
A
HOH
382
5
HOH
HOH
382
A
HOH
383
5
HOH
HOH
383
A
HOH
384
5
HOH
HOH
384
A
HOH
386
5
HOH
HOH
386
A
HOH
387
5
HOH
HOH
387
A
HOH
388
5
HOH
HOH
388
A
HOH
389
5
HOH
HOH
389
A
HOH
390
5
HOH
HOH
390
A
HOH
391
5
HOH
HOH
391
A
HOH
394
5
HOH
HOH
394
A
HOH
395
5
HOH
HOH
395
A
HOH
396
5
HOH
HOH
396
A
HOH
397
5
HOH
HOH
397
A
HOH
398
5
HOH
HOH
398
A
HOH
399
5
HOH
HOH
399
A
HOH
401
5
HOH
HOH
401
A
HOH
403
5
HOH
HOH
403
A
HOH
404
5
HOH
HOH
404
A
HOH
405
5
HOH
HOH
405
A
HOH
406
5
HOH
HOH
406
A
HOH
407
5
HOH
HOH
407
A
HOH
408
5
HOH
HOH
408
A
HOH
409
5
HOH
HOH
409
A
HOH
415
5
HOH
HOH
415
A
HOH
416
5
HOH
HOH
416
A
HOH
420
5
HOH
HOH
420
A
HOH
425
5
HOH
HOH
425
A
HOH
426
5
HOH
HOH
426
A
HOH
427
5
HOH
HOH
427
A
HOH
430
5
HOH
HOH
430
A
HOH
431
5
HOH
HOH
431
A
HOH
432
5
HOH
HOH
432
A
HOH
433
5
HOH
HOH
433
A
HOH
436
5
HOH
HOH
436
A
HOH
437
5
HOH
HOH
437
A
HOH
438
5
HOH
HOH
438
A
HOH
440
5
HOH
HOH
440
A
HOH
503
5
HOH
HOH
503
A
HOH
508
5
HOH
HOH
508
A
HOH
509
5
HOH
HOH
509
A
HOH
510
5
HOH
HOH
510
A
HOH
513
5
HOH
HOH
513
A
HOH
514
5
HOH
HOH
514
A
HOH
515
5
HOH
HOH
515
A
HOH
517
5
HOH
HOH
517
A
HOH
518
5
HOH
HOH
518
A
HOH
522
5
HOH
HOH
522
A
HOH
602
5
HOH
HOH
602
A
HOH
603
5
HOH
HOH
603
A
HOH
604
5
HOH
HOH
604
A
HOH
605
5
HOH
HOH
605
A
HOH
606
5
HOH
HOH
606
A
HOH
608
5
HOH
HOH
608
A
HOH
609
5
HOH
HOH
609
A
HOH
610
5
HOH
HOH
610
A
HOH
701
5
HOH
HOH
701
A
HOH
702
5
HOH
HOH
702
A
HOH
801
5
HOH
HOH
801
A
HOH
802
5
HOH
HOH
802
A
HOH
803
5
HOH
HOH
803
A
HOH
804
5
HOH
HOH
804
A
HOH
805
5
HOH
HOH
805
A
HOH
806
5
HOH
HOH
806
A
HOH
807
5
HOH
HOH
807
A
HOH
808
5
HOH
HOH
808
A
HOH
809
5
HOH
HOH
809
A
HOH
810
5
HOH
HOH
810
A
HOH
811
5
HOH
HOH
811
A
HOH
812
5
HOH
HOH
812
A
HOH
813
5
HOH
HOH
813
A
HOH
814
5
HOH
HOH
814
A
HOH
815
5
HOH
HOH
815
A
HOH
816
5
HOH
HOH
816
A
HOH
817
5
HOH
HOH
817
A
HOH
818
5
HOH
HOH
818
A
HOH
819
5
HOH
HOH
819
A
HOH
820
5
HOH
HOH
820
A
HOH
821
5
HOH
HOH
821
A
HOH
822
5
HOH
HOH
822
A
HOH
823
5
HOH
HOH
823
A
PHE
1
n
1
PHE
1
A
THR
2
n
2
THR
2
A
LEU
3
n
3
LEU
3
A
ILE
4
n
4
ILE
4
A
GLU
5
n
5
GLU
5
A
LEU
6
n
6
LEU
6
A
MET
7
n
7
MET
7
A
ILE
8
n
8
ILE
8
A
VAL
9
n
9
VAL
9
A
ILE
10
n
10
ILE
10
A
ALA
11
n
11
ALA
11
A
ILE
12
n
12
ILE
12
A
VAL
13
n
13
VAL
13
A
GLY
14
n
14
GLY
14
A
ILE
15
n
15
ILE
15
A
LEU
16
n
16
LEU
16
A
ALA
17
n
17
ALA
17
A
ALA
18
n
18
ALA
18
A
VAL
19
n
19
VAL
19
A
ALA
20
n
20
ALA
20
A
LEU
21
n
21
LEU
21
A
PRO
22
n
22
PRO
22
A
ALA
23
n
23
ALA
23
A
TYR
24
n
24
TYR
24
A
GLN
25
n
25
GLN
25
A
ASP
26
n
26
ASP
26
A
TYR
27
n
27
TYR
27
A
THR
28
n
28
THR
28
A
ALA
29
n
29
ALA
29
A
ARG
30
n
30
ARG
30
A
ALA
31
n
31
ALA
31
A
GLN
32
n
32
GLN
32
A
VAL
33
n
33
VAL
33
A
SER
34
n
34
SER
34
A
GLU
35
n
35
GLU
35
A
ALA
36
n
36
ALA
36
A
ILE
37
n
37
ILE
37
A
LEU
38
n
38
LEU
38
A
LEU
39
n
39
LEU
39
A
ALA
40
n
40
ALA
40
A
GLU
41
n
41
GLU
41
A
GLY
42
n
42
GLY
42
A
GLN
43
n
43
GLN
43
A
LYS
44
n
44
LYS
44
A
SER
45
n
45
SER
45
A
ALA
46
n
46
ALA
46
A
VAL
47
n
47
VAL
47
A
THR
48
n
48
THR
48
A
GLU
49
n
49
GLU
49
A
TYR
50
n
50
TYR
50
A
TYR
51
n
51
TYR
51
A
LEU
52
n
52
LEU
52
A
ASN
53
n
53
ASN
53
A
HIS
54
n
54
HIS
54
A
GLY
55
n
55
GLY
55
A
LYS
56
n
56
LYS
56
A
TRP
57
n
57
TRP
57
A
PRO
58
n
58
PRO
58
A
GLU
59
n
59
GLU
59
A
ASN
60
n
60
ASN
60
A
ASN
61
n
61
ASN
61
A
THR
62
n
62
THR
62
A
SER
63
n
63
SER
63
A
ALA
64
n
64
ALA
64
A
GLY
65
n
65
GLY
65
A
VAL
66
n
66
VAL
66
A
ALA
67
n
67
ALA
67
A
SER
68
n
68
SER
68
A
PRO
69
n
69
PRO
69
A
PRO
70
n
70
PRO
70
A
SER
71
n
71
SER
71
A
ASP
72
n
72
ASP
72
A
ILE
73
n
73
ILE
73
A
LYS
74
n
74
LYS
74
A
GLY
75
n
75
GLY
75
A
LYS
76
n
76
LYS
76
A
TYR
77
n
77
TYR
77
A
VAL
78
n
78
VAL
78
A
LYS
79
n
79
LYS
79
A
GLU
80
n
80
GLU
80
A
VAL
81
n
81
VAL
81
A
GLU
82
n
82
GLU
82
A
VAL
83
n
83
VAL
83
A
LYS
84
n
84
LYS
84
A
ASN
85
n
85
ASN
85
A
GLY
86
n
86
GLY
86
A
VAL
87
n
87
VAL
87
A
VAL
88
n
88
VAL
88
A
THR
89
n
89
THR
89
A
ALA
90
n
90
ALA
90
A
THR
91
n
91
THR
91
A
MET
92
n
92
MET
92
A
LEU
93
n
93
LEU
93
A
SER
94
n
94
SER
94
A
SER
95
n
95
SER
95
A
GLY
96
n
96
GLY
96
A
VAL
97
n
97
VAL
97
A
ASN
98
n
98
ASN
98
A
ASN
99
n
99
ASN
99
A
GLU
100
n
100
GLU
100
A
ILE
101
n
101
ILE
101
A
LYS
102
n
102
LYS
102
A
GLY
103
n
103
GLY
103
A
LYS
104
n
104
LYS
104
A
LYS
105
n
105
LYS
105
A
LEU
106
n
106
LEU
106
A
SER
107
n
107
SER
107
A
LEU
108
n
108
LEU
108
A
TRP
109
n
109
TRP
109
A
ALA
110
n
110
ALA
110
A
ARG
111
n
111
ARG
111
A
ARG
112
n
112
ARG
112
A
GLU
113
n
113
GLU
113
A
ASN
114
n
114
ASN
114
A
GLY
115
n
115
GLY
115
A
SER
116
n
116
SER
116
A
VAL
117
n
117
VAL
117
A
LYS
118
n
118
LYS
118
A
TRP
119
n
119
TRP
119
A
PHE
120
n
120
PHE
120
A
CYS
121
n
121
CYS
121
A
GLY
122
n
122
GLY
122
A
GLN
123
n
123
GLN
123
A
PRO
124
n
124
PRO
124
A
VAL
125
n
125
VAL
125
A
THR
126
n
126
THR
126
A
ARG
127
n
127
ARG
127
A
THR
128
n
128
THR
128
A
ASP
129
n
129
ASP
129
A
ASP
130
n
130
ASP
130
A
ASP
131
n
131
ASP
131
A
THR
132
n
132
THR
132
A
VAL
133
n
133
VAL
133
A
ALA
134
n
134
ALA
134
A
ASP
135
n
135
ASP
135
A
ALA
136
n
136
ALA
136
A
LYS
137
n
137
LYS
137
A
ASP
138
n
138
ASP
138
A
GLY
139
n
139
GLY
139
A
LYS
140
n
140
LYS
140
A
GLU
141
n
141
GLU
141
A
ILE
142
n
142
ILE
142
A
ASP
143
n
143
ASP
143
A
THR
144
n
144
THR
144
A
LYS
145
n
145
LYS
145
A
HIS
146
n
146
HIS
146
A
LEU
147
n
147
LEU
147
A
PRO
148
n
148
PRO
148
A
SER
149
n
149
SER
149
A
THR
150
n
150
THR
150
A
CYS
151
n
151
CYS
151
A
ARG
152
n
152
ARG
152
A
ASP
153
n
153
ASP
153
A
ASN
154
n
154
ASN
154
A
PHE
155
n
155
PHE
155
A
ASP
156
n
156
ASP
156
A
ALA
157
n
157
ALA
157
A
LYS
158
n
158
LYS
158
A
author_defined_assembly
2
dimeric
A
HIS
54
A
NE2
HIS
54
1_555
A
PT
200
C
PT
PT
1_555
A
HIS
54
A
NE2
HIS
54
4_566
97.4
A
HIS
54
A
NE2
HIS
54
1_555
A
PT
200
C
PT
PT
1_555
A
HOH
333
E
O
HOH
1_555
73.6
A
HIS
54
A
NE2
HIS
54
4_566
A
PT
200
C
PT
PT
1_555
A
HOH
333
E
O
HOH
1_555
60.2
A
HIS
54
A
NE2
HIS
54
1_555
A
PT
200
C
PT
PT
1_555
A
HOH
333
E
O
HOH
4_566
60.2
A
HIS
54
A
NE2
HIS
54
4_566
A
PT
200
C
PT
PT
1_555
A
HOH
333
E
O
HOH
4_566
73.6
A
HOH
333
E
O
HOH
1_555
A
PT
200
C
PT
PT
1_555
A
HOH
333
E
O
HOH
4_566
107.6
A
HIS
54
A
NE2
HIS
54
1_555
A
PT
200
C
PT
PT
1_555
A
HOH
348
E
O
HOH
1_555
173.0
A
HIS
54
A
NE2
HIS
54
4_566
A
PT
200
C
PT
PT
1_555
A
HOH
348
E
O
HOH
1_555
79.2
A
HOH
333
E
O
HOH
1_555
A
PT
200
C
PT
PT
1_555
A
HOH
348
E
O
HOH
1_555
109.3
A
HOH
333
E
O
HOH
4_566
A
PT
200
C
PT
PT
1_555
A
HOH
348
E
O
HOH
1_555
112.9
A
HIS
54
A
NE2
HIS
54
1_555
A
PT
200
C
PT
PT
1_555
A
HOH
348
E
O
HOH
4_566
79.2
A
HIS
54
A
NE2
HIS
54
4_566
A
PT
200
C
PT
PT
1_555
A
HOH
348
E
O
HOH
4_566
173.1
A
HOH
333
E
O
HOH
1_555
A
PT
200
C
PT
PT
1_555
A
HOH
348
E
O
HOH
4_566
113.0
A
HOH
333
E
O
HOH
4_566
A
PT
200
C
PT
PT
1_555
A
HOH
348
E
O
HOH
4_566
109.4
A
HOH
348
E
O
HOH
1_555
A
PT
200
C
PT
PT
1_555
A
HOH
348
E
O
HOH
4_566
104.9
A
SER
63
GLYCOSYLATION SITE
A
SER
63
SER
A
PHE
1
METHYL L-PHENYLALANINATE
A
PHE
1
PHE
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_555
x,-y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
O
SER
116
A
O
SER
116
A
N
GLU
113
A
N
GLU
113
A
O
LEU
106
A
O
LEU
106
A
N
ALA
90
A
N
ALA
90
A
O
VAL
87
A
O
VAL
87
A
N
LYS
84
A
N
LYS
84
A
O
THR
126
A
O
THR
126
A
N
ALA
134
A
N
ALA
134
1
A
PT
200
C
PT
1
A
TYR
50
0.096
SIDE CHAIN
1
-11.66
1.80
110.60
98.94
A
A
A
N
CA
CB
PHE
PHE
PHE
1
1
1
N
1
24.13
2.70
111.00
135.13
A
A
A
N
CA
C
THR
THR
THR
2
2
2
N
1
-10.23
1.50
110.90
100.67
A
A
A
CA
CB
CG2
VAL
VAL
VAL
19
19
19
N
1
-4.27
0.60
121.00
116.73
A
A
A
CB
CG
CD1
TYR
TYR
TYR
27
27
27
N
1
-3.35
0.50
120.30
116.95
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
30
30
30
N
1
6.33
0.80
106.30
112.63
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
57
57
57
N
1
-8.25
1.30
127.00
118.75
A
A
A
CB
CG
CD1
TRP
TRP
TRP
57
57
57
N
1
-6.01
0.80
107.30
101.29
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
57
57
57
N
1
6.34
0.90
133.90
140.24
A
A
A
CG
CD2
CE3
TRP
TRP
TRP
57
57
57
N
1
16.95
2.70
111.20
128.15
A
A
A
CA
CB
OG
SER
SER
SER
68
68
68
N
1
-5.10
0.60
121.00
115.90
A
A
A
CB
CG
CD2
TYR
TYR
TYR
77
77
77
N
1
21.52
2.30
115.30
136.82
A
A
A
CA
CB
CG
LEU
LEU
LEU
106
106
106
N
1
6.52
0.80
106.30
112.82
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
109
109
109
N
1
-5.75
0.80
107.30
101.55
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
109
109
109
N
1
6.50
0.80
106.30
112.80
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
119
119
119
N
1
-5.99
0.80
107.30
101.31
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
119
119
119
N
1
6.12
0.90
133.90
140.02
A
A
A
CG
CD2
CE3
TRP
TRP
TRP
119
119
119
N
1
-13.38
2.20
111.50
98.12
A
A
A
N
CA
CB
VAL
VAL
VAL
125
125
125
N
1
3.11
0.50
120.30
123.41
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
152
152
152
N
1
-3.93
0.50
120.30
116.37
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
152
152
152
N
1
A
A
NE2
CD2
HIS
HIS
146
146
-0.079
0.011
1.373
1.294
N
1
A
HIS
54
-147.14
-29.57
1
A
GLU
113
-109.63
77.08
1
A
ASN
114
-4.61
106.11
1
A
ALA
136
-118.03
62.29
PARAM19X.PRO
TOPH19X.PRO
PARAM_AUX.PRO
TOPH3.CHO
PARAM3_MOD.CHO
HEPT123.TOP
TOPH19.PEP
30.
-4.25
0.0
0.0
8.25
0.0
-4.00
SOLVENT FLATTENING (WITH 50%) SOLVENT) USING PHASES WAS USED TO IMPROVE PHASES (F.O.M. INCREASED FROM 0.75 - 0.86) FOR FITTING. DATA FROM A PT-SOAKED DERIVATIVE CRYSTAL WAS USED FOR REFINEMENT BECAUSE IT WAS STRONGER THAN "NATIVE" DATA.
THE EXPECTED N-TERMINAL METHYL-PHE WAS VERIFIED BY
N-TERMINAL SEQUENCING BUT WAS NOT INCLUDED IN THE MODEL
BECAUSE IT WAS NOT APPARENT IN ELECTRON DENSITY.
WATERS WERE NOT RESTRAINED DURING REFINEMENT AND TWO WATERS
(333 AND 348) MOVED CLOSE TO THE PT SITE.
0.194
0.194
2.6
10.0
6565
95.0
100000.0
0.1
1
RESTRAINED
2.0
MIR
10.0
2.6
10.0
129
1373
36
0
1208
0.017
3.5
1.359
1.5
2.0
2.0
2.5
0.324
2.72
723
8
2.6
24.0
1AY2
6494
2.0
0.081
1
6.7
4.0
95.
2.6
2.78
2.3
0.307
1
4.2
80.2
data reduction
MOSFLM
data reduction
ROTAVATA
data reduction
Agrovata
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
data scaling
CCP4
(AGROVATA
data scaling
ROTAVATA
phasing
X-PLOR
3.1
STRUCTURE OF THE FIBER-FORMING PROTEIN PILIN AT 2.6 ANGSTROMS RESOLUTION
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
A
THR
2
A
THR
2
HELX_P
A
HIS
54
A
HIS
54
1
1
53
A
ASN
60
A
ASN
60
HELX_P
A
ALA
64
A
ALA
64
1
2
5
A
PRO
69
A
PRO
69
HELX_P
A
ASP
72
A
ASP
72
5
3
4
A
ASN
99
A
ASN
99
HELX_P
A
LYS
102
A
LYS
102
5
4
4
A
THR
144
A
THR
144
HELX_P
A
HIS
146
A
HIS
146
5
5
3
disulf
2.010
A
CYS
121
A
SG
CYS
121
1_555
A
CYS
151
A
SG
CYS
151
1_555
covale
1.396
both
A
PHE
1
A
C
PHE
1
1_555
A
THR
2
A
N
THR
2
1_555
covale
1.397
one
O-Glycosylation
A
SER
63
A
OG
SER
63
1_555
B
NAG
1
B
C1
NAG
1_555
covale
1.396
both
B
NAG
1
B
O3
NAG
1_555
B
GLA
2
B
C1
GLA
1_555
metalc
3.381
A
HIS
54
A
NE2
HIS
54
1_555
A
PT
200
C
PT
PT
1_555
metalc
3.383
A
HIS
54
A
NE2
HIS
54
4_566
A
PT
200
C
PT
PT
1_555
metalc
1.651
A
PT
200
C
PT
PT
1_555
A
HOH
333
E
O
HOH
1_555
metalc
1.651
A
PT
200
C
PT
PT
1_555
A
HOH
333
E
O
HOH
4_566
metalc
1.630
A
PT
200
C
PT
PT
1_555
A
HOH
348
E
O
HOH
1_555
metalc
1.628
A
PT
200
C
PT
PT
1_555
A
HOH
348
E
O
HOH
4_566
CELL ADHESION
TYPE IV PILIN, FIBER-FORMING PROTEIN, MEMBRANE PROTEIN, DNA INDING PROTEIN, CONTRACTILE PROTEIN, CELL ADHESION
FMM1_NEIGO
UNP
1
1
P02974
MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWPENNTSAGVASPPSDI
KGKYVKEVEVKNGVVTATMLSSGVNNEIKGKKLSLWARRENGSVKWFCGQPVTRTDDDTVADAKDGKEIDTKHLPSTCRD
NFDAK
8
165
1AY2
1
158
P02974
A
1
1
158
4
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
SER
116
A
SER
116
A
GLN
123
A
GLN
123
A
LYS
105
A
LYS
105
A
GLU
113
A
GLU
113
A
VAL
87
A
VAL
87
A
MET
92
A
MET
92
A
VAL
78
A
VAL
78
A
LYS
84
A
LYS
84
A
VAL
125
A
VAL
125
A
ASP
129
A
ASP
129
A
THR
132
A
THR
132
A
ASP
135
A
ASP
135
21
C 2 2 2