0.013193
0.000000
0.000000
0.000000
0.013193
0.000000
0.000000
0.000000
0.009216
0.00000
0.00000
0.00000
Schreuder, H.A.
Metz, W.A.
Peet, N.P.
Pelton, J.T.
Tardif, C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
75.800
75.800
108.500
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C6 H12 O5
164.156
alpha-L-fucopyranose
alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose
L-saccharide, alpha linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C29 H37 F5 N4 O6
632.619
1-{3-METHYL-2-[4-(MORPHOLINE-4-CARBONYL)-BENZOYLAMINO]-BUTYRYL}-PYRROLIDINE-2-CARBOXYLIC ACID (3,3,4,4,4-PENTAFLUORO-1-ISOPROPYL-2-OXO-BUTYL)-AMIDE
MDL 101,146
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
R
C
N
89
S
C
N
90
R
C
N
91
S
C
N
92
S
C
N
93
N
C
N
94
N
O
N
95
N
O
N
96
N
O
N
97
N
O
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
N
N
112
S
C
N
113
N
C
N
114
N
O
N
115
N
C
N
116
N
C
N
117
N
C
N
118
N
O
N
119
N
N
N
120
N
O
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
N
N
132
S
C
N
133
N
C
N
134
N
O
N
135
N
C
N
136
N
C
N
137
N
C
N
138
N
O
N
139
N
O
N
140
N
O
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
N
N
151
N
C
N
152
N
C
N
153
N
O
N
154
N
O
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
N
N
161
S
C
N
162
N
C
N
163
N
O
N
164
N
C
Y
165
N
C
Y
166
N
N
Y
167
N
C
Y
168
N
C
Y
169
N
N
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
O
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
S
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
N
N
229
S
C
N
230
N
C
N
231
N
O
N
232
N
C
N
233
N
C
N
234
N
S
N
235
N
C
N
236
N
O
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
R
C
N
249
R
C
N
250
R
C
N
251
S
C
N
252
R
C
N
253
N
C
N
254
N
C
N
255
N
C
N
256
N
N
N
257
N
O
N
258
N
O
N
259
N
O
N
260
N
O
N
261
N
O
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
N
N
279
S
C
N
280
N
C
N
281
N
O
N
282
N
C
Y
283
N
C
Y
284
N
C
Y
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
N
289
N
O
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
N
C
N
306
N
C
N
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
C
N
319
N
C
N
320
N
C
Y
321
N
C
Y
322
N
C
Y
323
N
C
Y
324
N
C
N
325
N
C
N
326
N
C
N
327
N
C
N
328
N
C
N
329
N
O
N
330
N
N
N
331
N
C
N
332
N
C
N
333
N
O
Y
334
N
C
Y
335
N
C
N
336
N
N
N
337
S
C
N
338
N
C
N
339
N
O
N
340
S
C
N
341
N
C
N
342
N
C
N
343
N
C
N
344
N
C
N
345
N
N
N
346
N
N
N
347
N
O
N
348
S
C
N
349
N
C
N
350
N
C
N
351
N
C
N
352
N
C
N
353
N
C
N
354
N
O
N
355
N
F
N
356
N
F
N
357
N
C
N
358
N
F
N
359
N
F
N
360
N
F
N
361
N
O
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
N
N
400
S
C
N
401
N
C
N
402
N
O
N
403
N
C
N
404
N
O
N
405
N
O
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
N
N
414
S
C
N
415
N
C
N
416
N
O
N
417
R
C
N
418
N
O
N
419
N
C
N
420
N
O
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
N
N
431
S
C
N
432
N
C
N
433
N
O
N
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
N
Y
439
N
C
Y
440
N
C
Y
441
N
C
Y
442
N
C
Y
443
N
C
N
444
N
O
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
N
N
458
S
C
N
459
N
C
N
460
N
O
N
461
N
C
Y
462
N
C
Y
463
N
C
Y
464
N
C
Y
465
N
C
Y
466
N
C
Y
467
N
C
N
468
N
O
N
469
N
O
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
N
N
482
S
C
N
483
N
C
N
484
N
O
N
485
N
C
N
486
N
C
N
487
N
C
N
488
N
O
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
doub
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
Y
163
N
sing
Y
164
N
doub
Y
165
N
doub
N
166
N
sing
Y
167
N
sing
N
168
N
sing
Y
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
doub
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
doub
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
doub
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
Y
277
N
doub
Y
278
N
sing
Y
279
N
sing
N
280
N
sing
Y
281
N
doub
N
282
N
sing
Y
283
N
doub
N
284
N
sing
Y
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
doub
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
Y
316
N
doub
N
317
N
sing
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
N
322
N
sing
Y
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
Y
343
N
doub
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
doub
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
doub
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
doub
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
doub
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
doub
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
doub
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
Y
429
N
doub
Y
430
N
sing
Y
431
N
sing
N
432
N
sing
Y
433
N
doub
Y
434
N
sing
Y
435
N
sing
N
436
N
sing
Y
437
N
sing
Y
438
N
doub
N
439
N
sing
Y
440
N
doub
N
441
N
sing
Y
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
doub
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
Y
457
N
doub
Y
458
N
sing
Y
459
N
sing
N
460
N
sing
Y
461
N
doub
N
462
N
sing
Y
463
N
doub
N
464
N
sing
Y
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
doub
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
US
J.Med.Chem.
JMCMAR
0151
0022-2623
41
2461
2480
10.1021/jm970812e
9651152
Inhibition of human neutrophil elastase. 4. Design, synthesis, X-ray crystallographic analysis, and structure-activity relationships for a series of P2-modified, orally active peptidyl pentafluoroethyl ketones.
1998
10.2210/pdb1b0f/pdb
pdb_00001b0f
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
287.0
1
COLLIMATOR
AREA DETECTOR
1993-10-19
SIEMENS
GRAPHITE
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
SIEMENS
23233.850
PROTEIN (ELASTASE)
3.4.21.37
1
nat
polymer
570.542
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
2
man
branched
632.619
1-{3-METHYL-2-[4-(MORPHOLINE-4-CARBONYL)-BENZOYLAMINO]-BUTYRYL}-PYRROLIDINE-2-CARBOXYLIC ACID (3,3,4,4,4-PENTAFLUORO-1-ISOPROPYL-2-OXO-BUTYL)-AMIDE
1
syn
non-polymer
18.015
water
34
nat
water
HNE
no
no
IVGGRRARPHAWPFMVSLQLAGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFEDGY
DPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVVTSLCRRSNVCTL
VRGRQAGVCFGDSGSPLVCNGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSIIQ
IVGGRRARPHAWPFMVSLQLAGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFEDGY
DPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVVTSLCRRSNVCTL
VRGRQAGVCFGDSGSPLVCNGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSIIQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
NEUTROPHIL
9606
Homo sapiens
1
3.20
63.31
5.00
pH 5.00
pdbx_distant_solvent_atoms
pdbx_validate_close_contact
struct_conn
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
struct_asym
struct_conn
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Advisory
Data collection
Derived calculations
Atomic model
Data collection
Derived calculations
Structure summary
Data collection
Database references
Refinement description
Structure summary
1
0
1998-11-09
1
1
2008-04-26
1
2
2011-07-13
1
3
2018-11-14
2
0
2020-07-29
2
1
2023-08-09
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.name
_chem_comp.type
_pdbx_struct_assembly_gen.asym_id_list
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
B
NAG
401
n
B
NAG
1
B
NAG
403
n
B
NAG
2
B
FUC
402
n
B
FUC
3
C
NAG
411
n
C
NAG
1
C
NAG
413
n
C
NAG
2
C
FUC
412
n
C
FUC
3
LFucpa
a-L-fucopyranose
a-L-Fucp
Fuc
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
BNL
Y
RCSB
1998-11-09
REL
REL
1
A
O
HOH
14
7.22
1
A
O
HOH
425
10.21
oligosaccharide
DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-1-2/a4-b1_a6-c1
2
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}[(6+1)][a-L-Fucp]{}}}
2
PDB-CARE
LINUCS
C1
O4
NAG
NAG
2
1
2
O1
HO4
sing
C1
O6
FUC
NAG
3
1
2
O1
HO6
sing
n
n
n
SEI
1-{3-METHYL-2-[4-(MORPHOLINE-4-CARBONYL)-BENZOYLAMINO]-BUTYRYL}-PYRROLIDINE-2-CARBOXYLIC ACID (3,3,4,4,4-PENTAFLUORO-1-ISOPROPYL-2-OXO-BUTYL)-AMIDE
HOH
water
1HNE
PDB ENTRY 1HNE
PDB
experimental model
SEI
300
3
SEI
SEI
300
A
HOH
1
4
HOH
HOH
1
A
HOH
2
4
HOH
HOH
2
A
HOH
3
4
HOH
HOH
3
A
HOH
4
4
HOH
HOH
4
A
HOH
5
4
HOH
HOH
5
A
HOH
6
4
HOH
HOH
6
A
HOH
7
4
HOH
HOH
7
A
HOH
8
4
HOH
HOH
8
A
HOH
9
4
HOH
HOH
9
A
HOH
10
4
HOH
HOH
10
A
HOH
11
4
HOH
HOH
11
A
HOH
12
4
HOH
HOH
12
A
HOH
13
4
HOH
HOH
13
A
HOH
14
4
HOH
HOH
14
A
HOH
15
4
HOH
HOH
15
A
HOH
414
4
HOH
HOH
414
A
HOH
415
4
HOH
HOH
415
A
HOH
416
4
HOH
HOH
416
A
HOH
417
4
HOH
HOH
417
A
HOH
418
4
HOH
HOH
418
A
HOH
419
4
HOH
HOH
419
A
HOH
420
4
HOH
HOH
420
A
HOH
421
4
HOH
HOH
421
A
HOH
422
4
HOH
HOH
422
A
HOH
423
4
HOH
HOH
423
A
HOH
424
4
HOH
HOH
424
A
HOH
425
4
HOH
HOH
425
A
HOH
426
4
HOH
HOH
426
A
HOH
427
4
HOH
HOH
427
A
HOH
428
4
HOH
HOH
428
A
HOH
429
4
HOH
HOH
429
A
HOH
430
4
HOH
HOH
430
A
HOH
431
4
HOH
HOH
431
A
HOH
432
4
HOH
HOH
432
A
ILE
16
n
1
ILE
16
A
VAL
17
n
2
VAL
17
A
GLY
18
n
3
GLY
18
A
GLY
19
n
4
GLY
19
A
ARG
20
n
5
ARG
20
A
ARG
21
n
6
ARG
21
A
ALA
22
n
7
ALA
22
A
ARG
23
n
8
ARG
23
A
PRO
24
n
9
PRO
24
A
HIS
25
n
10
HIS
25
A
ALA
26
n
11
ALA
26
A
TRP
27
n
12
TRP
27
A
PRO
28
n
13
PRO
28
A
PHE
29
n
14
PHE
29
A
MET
30
n
15
MET
30
A
VAL
31
n
16
VAL
31
A
SER
32
n
17
SER
32
A
LEU
33
n
18
LEU
33
A
GLN
34
n
19
GLN
34
A
LEU
35
n
20
LEU
35
A
ALA
36
n
21
ALA
36
A
GLY
38
n
22
GLY
38
A
GLY
39
n
23
GLY
39
A
HIS
40
n
24
HIS
40
A
PHE
41
n
25
PHE
41
A
CYS
42
n
26
CYS
42
A
GLY
43
n
27
GLY
43
A
ALA
44
n
28
ALA
44
A
THR
45
n
29
THR
45
A
LEU
46
n
30
LEU
46
A
ILE
47
n
31
ILE
47
A
ALA
48
n
32
ALA
48
A
PRO
49
n
33
PRO
49
A
ASN
50
n
34
ASN
50
A
PHE
51
n
35
PHE
51
A
VAL
52
n
36
VAL
52
A
MET
53
n
37
MET
53
A
SER
54
n
38
SER
54
A
ALA
55
n
39
ALA
55
A
ALA
56
n
40
ALA
56
A
HIS
57
n
41
HIS
57
A
CYS
58
n
42
CYS
58
A
VAL
59
n
43
VAL
59
A
ALA
60
n
44
ALA
60
A
ASN
61
n
45
ASN
61
A
VAL
62
n
46
VAL
62
A
ASN
62
n
47
A
ASN
62
A
VAL
62
n
48
B
VAL
62
A
ARG
63
n
49
ARG
63
A
ALA
64
n
50
ALA
64
A
VAL
65
n
51
VAL
65
A
ARG
65
n
52
A
ARG
65
A
VAL
66
n
53
VAL
66
A
VAL
67
n
54
VAL
67
A
LEU
68
n
55
LEU
68
A
GLY
69
n
56
GLY
69
A
ALA
70
n
57
ALA
70
A
HIS
71
n
58
HIS
71
A
ASN
72
n
59
ASN
72
A
LEU
73
n
60
LEU
73
A
SER
74
n
61
SER
74
A
ARG
75
n
62
ARG
75
A
ARG
76
n
63
ARG
76
A
GLU
77
n
64
GLU
77
A
PRO
78
n
65
PRO
78
A
THR
79
n
66
THR
79
A
ARG
80
n
67
ARG
80
A
GLN
81
n
68
GLN
81
A
VAL
82
n
69
VAL
82
A
PHE
83
n
70
PHE
83
A
ALA
84
n
71
ALA
84
A
VAL
85
n
72
VAL
85
A
GLN
86
n
73
GLN
86
A
ARG
87
n
74
ARG
87
A
ILE
88
n
75
ILE
88
A
PHE
89
n
76
PHE
89
A
GLU
90
n
77
GLU
90
A
ASP
91
n
78
ASP
91
A
GLY
92
n
79
GLY
92
A
TYR
94
n
80
TYR
94
A
ASP
95
n
81
ASP
95
A
PRO
98
n
82
PRO
98
A
VAL
99
n
83
VAL
99
A
ASN
99
n
84
A
ASN
99
A
LEU
99
n
85
B
LEU
99
A
LEU
100
n
86
LEU
100
A
ASN
101
n
87
ASN
101
A
ASP
102
n
88
ASP
102
A
ILE
103
n
89
ILE
103
A
VAL
104
n
90
VAL
104
A
ILE
105
n
91
ILE
105
A
LEU
106
n
92
LEU
106
A
GLN
107
n
93
GLN
107
A
LEU
108
n
94
LEU
108
A
ASN
109
n
95
ASN
109
A
GLY
110
n
96
GLY
110
A
SER
111
n
97
SER
111
A
ALA
112
n
98
ALA
112
A
THR
113
n
99
THR
113
A
ILE
114
n
100
ILE
114
A
ASN
115
n
101
ASN
115
A
ALA
116
n
102
ALA
116
A
ASN
117
n
103
ASN
117
A
VAL
118
n
104
VAL
118
A
GLN
119
n
105
GLN
119
A
VAL
120
n
106
VAL
120
A
ALA
121
n
107
ALA
121
A
GLN
122
n
108
GLN
122
A
LEU
123
n
109
LEU
123
A
PRO
124
n
110
PRO
124
A
ALA
125
n
111
ALA
125
A
GLN
126
n
112
GLN
126
A
GLY
127
n
113
GLY
127
A
ARG
128
n
114
ARG
128
A
ARG
129
n
115
ARG
129
A
LEU
130
n
116
LEU
130
A
GLY
131
n
117
GLY
131
A
ASN
132
n
118
ASN
132
A
GLY
133
n
119
GLY
133
A
VAL
134
n
120
VAL
134
A
GLN
135
n
121
GLN
135
A
CYS
136
n
122
CYS
136
A
LEU
137
n
123
LEU
137
A
ALA
138
n
124
ALA
138
A
MET
139
n
125
MET
139
A
GLY
140
n
126
GLY
140
A
TRP
141
n
127
TRP
141
A
GLY
142
n
128
GLY
142
A
LEU
143
n
129
LEU
143
A
LEU
144
n
130
LEU
144
A
GLY
145
n
131
GLY
145
A
ARG
147
n
132
ARG
147
A
ASN
148
n
133
ASN
148
A
ARG
149
n
134
ARG
149
A
GLY
150
n
135
GLY
150
A
ILE
151
n
136
ILE
151
A
ALA
152
n
137
ALA
152
A
SER
153
n
138
SER
153
A
VAL
154
n
139
VAL
154
A
LEU
155
n
140
LEU
155
A
GLN
156
n
141
GLN
156
A
GLU
157
n
142
GLU
157
A
LEU
158
n
143
LEU
158
A
ASN
159
n
144
ASN
159
A
VAL
160
n
145
VAL
160
A
THR
162
n
146
THR
162
A
VAL
163
n
147
VAL
163
A
VAL
164
n
148
VAL
164
A
THR
165
n
149
THR
165
A
SER
166
n
150
SER
166
A
LEU
167
n
151
LEU
167
A
CYS
168
n
152
CYS
168
A
ARG
177
n
153
ARG
177
A
ARG
178
n
154
ARG
178
A
SER
179
n
155
SER
179
A
ASN
180
n
156
ASN
180
A
VAL
181
n
157
VAL
181
A
CYS
182
n
158
CYS
182
A
THR
183
n
159
THR
183
A
LEU
184
n
160
LEU
184
A
VAL
185
n
161
VAL
185
A
ARG
186
n
162
ARG
186
A
GLY
186
n
163
A
GLY
186
A
ARG
187
n
164
ARG
187
A
GLN
188
n
165
GLN
188
A
ALA
188
n
166
A
ALA
188
A
GLY
189
n
167
GLY
189
A
VAL
190
n
168
VAL
190
A
CYS
191
n
169
CYS
191
A
PHE
192
n
170
PHE
192
A
GLY
193
n
171
GLY
193
A
ASP
194
n
172
ASP
194
A
SER
195
n
173
SER
195
A
GLY
196
n
174
GLY
196
A
SER
197
n
175
SER
197
A
PRO
198
n
176
PRO
198
A
LEU
199
n
177
LEU
199
A
VAL
200
n
178
VAL
200
A
CYS
201
n
179
CYS
201
A
ASN
204
n
180
ASN
204
A
GLY
205
n
181
GLY
205
A
LEU
208
n
182
LEU
208
A
ILE
209
n
183
ILE
209
A
HIS
210
n
184
HIS
210
A
GLY
211
n
185
GLY
211
A
ILE
212
n
186
ILE
212
A
ALA
213
n
187
ALA
213
A
SER
214
n
188
SER
214
A
PHE
215
n
189
PHE
215
A
VAL
216
n
190
VAL
216
A
ARG
217
n
191
ARG
217
A
GLY
218
n
192
GLY
218
A
GLY
219
n
193
GLY
219
A
CYS
220
n
194
CYS
220
A
ALA
221
n
195
ALA
221
A
SER
222
n
196
SER
222
A
GLY
222
n
197
A
GLY
222
A
LEU
223
n
198
LEU
223
A
TYR
224
n
199
TYR
224
A
PRO
225
n
200
PRO
225
A
ASP
226
n
201
ASP
226
A
ALA
227
n
202
ALA
227
A
PHE
228
n
203
PHE
228
A
ALA
229
n
204
ALA
229
A
PRO
230
n
205
PRO
230
A
VAL
231
n
206
VAL
231
A
ALA
232
n
207
ALA
232
A
GLN
233
n
208
GLN
233
A
PHE
234
n
209
PHE
234
A
VAL
235
n
210
VAL
235
A
ASN
236
n
211
ASN
236
A
TRP
237
n
212
TRP
237
A
ILE
238
n
213
ILE
238
A
ASP
239
n
214
ASP
239
A
SER
240
n
215
SER
240
A
ILE
241
n
216
ILE
241
A
ILE
242
n
217
ILE
242
A
GLN
243
n
218
GLN
243
A
author_defined_assembly
1
monomeric
A
ASN
109
GLYCOSYLATION SITE
A
ASN
95
ASN
A
ASN
159
GLYCOSYLATION SITE
A
ASN
144
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLN
81
A
O
GLN
68
A
N
LEU
68
A
N
LEU
55
A
A
O
ARG
65
A
O
ARG
52
A
N
GLN
34
A
N
GLN
19
A
O
VAL
31
A
O
VAL
16
A
N
ALA
44
A
N
ALA
28
A
O
THR
45
A
O
THR
29
A
N
MET
53
A
N
MET
37
A
O
VAL
52
A
O
VAL
36
A
N
LEU
106
A
N
LEU
92
A
O
ILE
105
A
O
ILE
91
A
N
PHE
89
A
N
PHE
76
A
O
GLN
156
A
O
GLN
141
A
N
GLY
140
A
N
GLY
126
A
O
LEU
137
A
O
LEU
123
A
N
VAL
200
A
N
VAL
178
A
O
LEU
199
A
O
LEU
177
A
N
GLY
211
A
N
GLY
185
A
O
ILE
212
A
O
ILE
186
A
N
ALA
229
A
N
ALA
204
A
O
ASP
226
A
O
ASP
201
A
N
THR
183
A
N
THR
159
A
O
CYS
182
A
O
CYS
158
A
N
VAL
164
A
N
VAL
148
1
A
A
OG
O74
SER
SEI
195
300
1.96
1
A
ALA
60
-40.72
-80.86
1
A
HIS
71
-146.12
-52.15
1
A
ASN
115
-150.63
-158.99
1
A
ARG
147
-37.95
-33.77
1
A
ARG
186
-39.81
123.23
1
A
SER
214
-120.37
-70.35
1
A
ILE
242
-69.51
2.08
PARHCSDX.PRO
TOPHCSDX.PRO
INHIBITOR.PAR
103139.TOP
WAT.PAR
WAT.TOP
PARAM3_MOD.CHO
TOPH3.CHO
21.00
0.16
0.16
3.00
8.00
5799
91.2
100000.000
0.1000
1
RESTRAINED
2.000
MOLECULAR REPLACEMENT
PDB ENTRY 1HNE
0.25
3.00
8.00
34
1784
120
0
1630
0.012
1.80
26.40
1.43
2.84
1.500
4.46
2.000
8.45
3.000
13.50
5.000
0.206
3.13
576
8
75.20
3.000
20.000
1B0F
6729
0.099
1
7.200
99.1
3.00
3.10
0.371
1
5.20
95.9
data scaling
XDS
data scaling
XSCALE
phasing
AMoRE
refinement
X-PLOR
3.1
data reduction
XDS
CRYSTAL STRUCTURE OF HUMAN NEUTROPHIL ELASTASE WITH MDL 101, 146
1
N
N
2
N
N
2
N
N
3
N
N
4
N
N
A
ALA
56
A
ALA
40
HELX_P
A
VAL
59
A
VAL
43
1
1
4
A
VAL
62
A
VAL
48
HELX_P
A
ALA
64
A
ALA
50
5
2
3
B
A
VAL
231
A
VAL
206
HELX_P
A
ILE
241
A
ILE
216
5
3
11
disulf
2.024
A
CYS
42
A
SG
CYS
26
1_555
A
CYS
58
A
SG
CYS
42
1_555
disulf
2.035
A
CYS
136
A
SG
CYS
122
1_555
A
CYS
201
A
SG
CYS
179
1_555
disulf
2.022
A
CYS
168
A
SG
CYS
152
1_555
A
CYS
182
A
SG
CYS
158
1_555
disulf
2.021
A
CYS
191
A
SG
CYS
169
1_555
A
CYS
220
A
SG
CYS
194
1_555
covale
1.449
one
N-Glycosylation
A
ASN
109
A
ND2
ASN
95
1_555
B
NAG
1
B
C1
NAG
1_555
covale
1.447
one
N-Glycosylation
A
ASN
159
A
ND2
ASN
144
1_555
C
NAG
1
C
C1
NAG
1_555
covale
1.488
none
A
SER
195
A
OG
SER
173
1_555
A
SEI
300
D
C71
SEI
1_555
covale
1.391
both
B
NAG
1
B
O4
NAG
1_555
B
NAG
2
B
C1
NAG
1_555
covale
1.397
both
B
NAG
1
B
O6
NAG
1_555
B
FUC
3
B
C1
FUC
1_555
covale
1.387
both
C
NAG
1
C
O4
NAG
1_555
C
NAG
2
C
C1
NAG
1_555
covale
1.398
both
C
NAG
1
C
O6
NAG
1_555
C
FUC
3
C
C1
FUC
1_555
HYDROLASE
SERINE PROTEASE, FLUOROETHYL KETONES, HYDROLASE
ELNE_HUMAN
UNP
1
P08246
30
247
1B0F
16
243
P08246
A
1
1
218
7
7
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLN
81
A
GLN
68
A
ALA
84
A
ALA
71
A
VAL
65
A
VAL
51
A
LEU
68
A
LEU
55
A
MET
30
A
MET
15
A
LEU
35
A
LEU
20
A
GLY
39
A
GLY
23
A
ALA
48
A
ALA
32
A
PHE
51
A
PHE
35
A
SER
54
A
SER
38
A
VAL
104
A
VAL
90
A
LEU
108
A
LEU
94
A
VAL
85
A
VAL
72
A
GLU
90
A
GLU
77
A
GLN
156
A
GLN
141
A
THR
162
A
THR
146
A
GLN
135
A
GLN
121
A
GLY
140
A
GLY
126
A
PRO
198
A
PRO
176
A
CYS
201
A
CYS
179
A
LEU
208
A
LEU
182
A
PHE
215
A
PHE
189
A
ASP
226
A
ASP
201
A
ALA
229
A
ALA
204
A
ASN
180
A
ASN
156
A
LEU
184
A
LEU
160
A
THR
162
A
THR
146
A
VAL
164
A
VAL
148
95
P 43 2 2