0.012189 0.000000 0.000000 0.000000 0.007037 0.000000 0.000000 0.000000 0.012843 0.00000 0.00000 0.00000 Schormann, N. Benson, M.D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 24 90.00 90.00 90.00 82.040 142.110 77.860 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N O N 138 N H N 139 N H N 140 N N N 141 S C N 142 N C N 143 N O N 144 S C N 145 N C N 146 N C N 147 N C N 148 N O N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N N N 163 S C N 164 N C N 165 N O N 166 N C N 167 N C N 168 N C N 169 N C N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N N N 185 S C N 186 N C N 187 N O N 188 N C N 189 N C N 190 N C N 191 N C N 192 N N N 193 N O N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N N N 210 S C N 211 N C N 212 N O N 213 N C N 214 N C N 215 N S N 216 N C N 217 N O N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N N N 230 S C N 231 N C N 232 N O N 233 N C Y 234 N C Y 235 N C Y 236 N C Y 237 N C Y 238 N C Y 239 N C N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N N N 253 S C N 254 N C N 255 N O N 256 N C N 257 N C N 258 N C N 259 N O N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N N N 270 S C N 271 N C N 272 N O N 273 N C N 274 N O N 275 N O N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N N N 284 S C N 285 N C N 286 N O N 287 R C N 288 N O N 289 N C N 290 N O N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N N N 301 S C N 302 N C N 303 N O N 304 N C Y 305 N C Y 306 N C Y 307 N C Y 308 N N Y 309 N C Y 310 N C Y 311 N C Y 312 N C Y 313 N C N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N N N 328 S C N 329 N C N 330 N O N 331 N C Y 332 N C Y 333 N C Y 334 N C Y 335 N C Y 336 N C Y 337 N C N 338 N O N 339 N O N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N N N 352 S C N 353 N C N 354 N O N 355 N C N 356 N C N 357 N C N 358 N O N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N doub N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N doub N 223 N sing N 224 N sing N 225 N sing N 226 N sing Y 227 N doub Y 228 N sing Y 229 N sing N 230 N sing Y 231 N doub N 232 N sing Y 233 N doub N 234 N sing Y 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N doub N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N doub N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing Y 296 N doub Y 297 N sing Y 298 N sing N 299 N sing Y 300 N doub Y 301 N sing Y 302 N sing N 303 N sing Y 304 N sing Y 305 N doub N 306 N sing Y 307 N doub N 308 N sing Y 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N doub N 320 N sing N 321 N sing N 322 N sing N 323 N sing Y 324 N doub Y 325 N sing Y 326 N sing N 327 N sing Y 328 N doub N 329 N sing Y 330 N doub N 331 N sing Y 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N doub N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing US Amyloid 9999 1350-6129 5 175 187 9818054 Tertiary structures of amyloidogenic and non-amyloidogenic transthyretin variants: new model for amyloid fibril formation 1998 US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 92 9490 9494 Tertiary Structure of an Amyloid Immunoglobulin Light Chain Protein: A Proposed Model for Amyloid Fibril Formation 1995 10.2210/pdb1b0w/pdb pdb_00001b0w 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 287 1 COLLIMATOR IMAGE PLATE 1994-02-01 RIGAKU GRAPHITE SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 11945.124 BENCE-JONES KAPPA I PROTEIN BRE VARIABLE DOMAIN OF LIGHT CHAIN 3 man polymer 18.015 water 104 nat water BENCE-JONES no no DIQMTQSPSSLSASVGDRVTITCQASQDISDYLIWYQQKLGKAPNLLIYDASTLETGVPSRFSGSGSGTEYTFTISSLQP EDIATYYCQQYDDLPYTFGQGTKVEIKR DIQMTQSPSSLSASVGDRVTITCQASQDISDYLIWYQQKLGKAPNLLIYDASTLETGVPSRFSGSGSGTEYTFTISSLQP EDIATYYCQQYDDLPYTFGQGTKVEIKR A,B,C polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample PATIENT BRE 9606 Homo sapiens CDNA (GENBANK ACCESSION CODE U31344) 562 Escherichia coli HB101 PLASMID PCZ11 1 3.2 61.15 VAPOR DIFFUSION, HANGING DROP 6.5 CRYSTALS OF BRE (20MG/ML IN 0.1M TRIS BUFFER, PH 7) WERE GROWN AT RT IN HANGING-DROPS USING 2.5M AMMONIUM SULFATE IN 0.1M CITRATE BUFFER (PH 5.5)., pH 6.5, VAPOR DIFFUSION, HANGING DROP software pdbx_distant_solvent_atoms pdbx_struct_assembly pdbx_struct_assembly_gen pdbx_struct_oper_list struct_biol chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Refinement description Advisory Author supporting evidence Data collection Derived calculations Data collection Database references Refinement description 1 0 1998-11-16 1 1 2008-04-26 1 2 2011-07-13 1 3 2017-10-04 1 4 2018-05-30 1 5 2023-08-09 _software.name _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly_gen.oper_expression _struct_biol.details _database_2.pdbx_DOI _database_2.pdbx_database_accession different crystal form BNL Y RCSB 1998-11-13 REL REL 1 A O HOH 109 6.24 1 A O HOH 138 6.30 1 A O HOH 164 6.46 1 A O HOH 170 6.44 1 C O HOH 121 5.81 1 C O HOH 122 6.80 1 C O HOH 132 6.33 1 C O HOH 139 5.87 HOH water 1BRE PDB ENTRY 1BRE PDB experimental model HOH 1 2 HOH HOH 109 A HOH 2 2 HOH HOH 110 A HOH 3 2 HOH HOH 111 A HOH 4 2 HOH HOH 112 A HOH 5 2 HOH HOH 113 A HOH 6 2 HOH HOH 114 A HOH 8 2 HOH HOH 115 A HOH 9 2 HOH HOH 116 A HOH 10 2 HOH HOH 117 A HOH 11 2 HOH HOH 118 A HOH 12 2 HOH HOH 119 A HOH 13 2 HOH HOH 120 A HOH 15 2 HOH HOH 121 A HOH 17 2 HOH HOH 122 A HOH 18 2 HOH HOH 123 A HOH 19 2 HOH HOH 124 A HOH 20 2 HOH HOH 125 A HOH 21 2 HOH HOH 126 A HOH 22 2 HOH HOH 127 A HOH 23 2 HOH HOH 128 A HOH 25 2 HOH HOH 129 A HOH 27 2 HOH HOH 130 A HOH 29 2 HOH HOH 131 A HOH 31 2 HOH HOH 132 A HOH 107 2 HOH HOH 133 A HOH 109 2 HOH HOH 134 A HOH 112 2 HOH HOH 135 A HOH 114 2 HOH HOH 136 A HOH 115 2 HOH HOH 137 A HOH 116 2 HOH HOH 138 A HOH 122 2 HOH HOH 139 A HOH 128 2 HOH HOH 140 A HOH 134 2 HOH HOH 141 A HOH 141 2 HOH HOH 142 A HOH 148 2 HOH HOH 143 A HOH 151 2 HOH HOH 144 A HOH 153 2 HOH HOH 145 A HOH 208 2 HOH HOH 146 A HOH 212 2 HOH HOH 147 A HOH 213 2 HOH HOH 148 A HOH 215 2 HOH HOH 149 A HOH 224 2 HOH HOH 150 A HOH 228 2 HOH HOH 151 A HOH 234 2 HOH HOH 152 A HOH 235 2 HOH HOH 153 A HOH 236 2 HOH HOH 154 A HOH 241 2 HOH HOH 155 A HOH 242 2 HOH HOH 156 A HOH 244 2 HOH HOH 157 A HOH 245 2 HOH HOH 158 A HOH 246 2 HOH HOH 159 A HOH 248 2 HOH HOH 160 A HOH 256 2 HOH HOH 161 A HOH 258 2 HOH HOH 162 A HOH 259 2 HOH HOH 163 A HOH 262 2 HOH HOH 164 A HOH 264 2 HOH HOH 165 A HOH 265 2 HOH HOH 166 A HOH 267 2 HOH HOH 167 A HOH 270 2 HOH HOH 168 A HOH 277 2 HOH HOH 169 A HOH 280 2 HOH HOH 170 A HOH 281 2 HOH HOH 171 A HOH 285 2 HOH HOH 172 A HOH 287 2 HOH HOH 173 A HOH 120 2 HOH HOH 120 B HOH 139 2 HOH HOH 139 B HOH 216 2 HOH HOH 216 B HOH 223 2 HOH HOH 223 B HOH 226 2 HOH HOH 226 B HOH 261 2 HOH HOH 261 B HOH 263 2 HOH HOH 263 B HOH 282 2 HOH HOH 282 B HOH 32 2 HOH HOH 109 C HOH 132 2 HOH HOH 110 C HOH 152 2 HOH HOH 111 C HOH 218 2 HOH HOH 112 C HOH 219 2 HOH HOH 113 C HOH 222 2 HOH HOH 114 C HOH 225 2 HOH HOH 115 C HOH 227 2 HOH HOH 116 C HOH 230 2 HOH HOH 117 C HOH 231 2 HOH HOH 118 C HOH 232 2 HOH HOH 119 C HOH 237 2 HOH HOH 120 C HOH 238 2 HOH HOH 121 C HOH 239 2 HOH HOH 122 C HOH 240 2 HOH HOH 123 C HOH 243 2 HOH HOH 124 C HOH 247 2 HOH HOH 125 C HOH 251 2 HOH HOH 126 C HOH 255 2 HOH HOH 127 C HOH 260 2 HOH HOH 128 C HOH 266 2 HOH HOH 129 C HOH 271 2 HOH HOH 130 C HOH 273 2 HOH HOH 131 C HOH 274 2 HOH HOH 132 C HOH 275 2 HOH HOH 133 C HOH 276 2 HOH HOH 134 C HOH 278 2 HOH HOH 135 C HOH 279 2 HOH HOH 136 C HOH 283 2 HOH HOH 137 C HOH 284 2 HOH HOH 138 C HOH 286 2 HOH HOH 139 C ASP 1 n 1 ASP 1 A ILE 2 n 2 ILE 2 A GLN 3 n 3 GLN 3 A MET 4 n 4 MET 4 A THR 5 n 5 THR 5 A GLN 6 n 6 GLN 6 A SER 7 n 7 SER 7 A PRO 8 n 8 PRO 8 A SER 9 n 9 SER 9 A SER 10 n 10 SER 10 A LEU 11 n 11 LEU 11 A SER 12 n 12 SER 12 A ALA 13 n 13 ALA 13 A SER 14 n 14 SER 14 A VAL 15 n 15 VAL 15 A GLY 16 n 16 GLY 16 A ASP 17 n 17 ASP 17 A ARG 18 n 18 ARG 18 A VAL 19 n 19 VAL 19 A THR 20 n 20 THR 20 A ILE 21 n 21 ILE 21 A THR 22 n 22 THR 22 A CYS 23 n 23 CYS 23 A GLN 24 n 24 GLN 24 A ALA 25 n 25 ALA 25 A SER 26 n 26 SER 26 A GLN 27 n 27 GLN 27 A ASP 28 n 28 ASP 28 A ILE 29 n 29 ILE 29 A SER 30 n 30 SER 30 A ASP 31 n 31 ASP 31 A TYR 32 n 32 TYR 32 A LEU 33 n 33 LEU 33 A ILE 34 n 34 ILE 34 A TRP 35 n 35 TRP 35 A TYR 36 n 36 TYR 36 A GLN 37 n 37 GLN 37 A GLN 38 n 38 GLN 38 A LYS 39 n 39 LYS 39 A LEU 40 n 40 LEU 40 A GLY 41 n 41 GLY 41 A LYS 42 n 42 LYS 42 A ALA 43 n 43 ALA 43 A PRO 44 n 44 PRO 44 A ASN 45 n 45 ASN 45 A LEU 46 n 46 LEU 46 A LEU 47 n 47 LEU 47 A ILE 48 n 48 ILE 48 A TYR 49 n 49 TYR 49 A ASP 50 n 50 ASP 50 A ALA 51 n 51 ALA 51 A SER 52 n 52 SER 52 A THR 53 n 53 THR 53 A LEU 54 n 54 LEU 54 A GLU 55 n 55 GLU 55 A THR 56 n 56 THR 56 A GLY 57 n 57 GLY 57 A VAL 58 n 58 VAL 58 A PRO 59 n 59 PRO 59 A SER 60 n 60 SER 60 A ARG 61 n 61 ARG 61 A PHE 62 n 62 PHE 62 A SER 63 n 63 SER 63 A GLY 64 n 64 GLY 64 A SER 65 n 65 SER 65 A GLY 66 n 66 GLY 66 A SER 67 n 67 SER 67 A GLY 68 n 68 GLY 68 A THR 69 n 69 THR 69 A GLU 70 n 70 GLU 70 A TYR 71 n 71 TYR 71 A THR 72 n 72 THR 72 A PHE 73 n 73 PHE 73 A THR 74 n 74 THR 74 A ILE 75 n 75 ILE 75 A SER 76 n 76 SER 76 A SER 77 n 77 SER 77 A LEU 78 n 78 LEU 78 A GLN 79 n 79 GLN 79 A PRO 80 n 80 PRO 80 A GLU 81 n 81 GLU 81 A ASP 82 n 82 ASP 82 A ILE 83 n 83 ILE 83 A ALA 84 n 84 ALA 84 A THR 85 n 85 THR 85 A TYR 86 n 86 TYR 86 A TYR 87 n 87 TYR 87 A CYS 88 n 88 CYS 88 A GLN 89 n 89 GLN 89 A GLN 90 n 90 GLN 90 A TYR 91 n 91 TYR 91 A ASP 92 n 92 ASP 92 A ASP 93 n 93 ASP 93 A LEU 94 n 94 LEU 94 A PRO 95 n 95 PRO 95 A TYR 96 n 96 TYR 96 A THR 97 n 97 THR 97 A PHE 98 n 98 PHE 98 A GLY 99 n 99 GLY 99 A GLN 100 n 100 GLN 100 A GLY 101 n 101 GLY 101 A THR 102 n 102 THR 102 A LYS 103 n 103 LYS 103 A VAL 104 n 104 VAL 104 A GLU 105 n 105 GLU 105 A ILE 106 n 106 ILE 106 A LYS 107 n 107 LYS 107 A ARG 108 n 108 ARG 108 A ASP 1 n 1 ASP 1 B ILE 2 n 2 ILE 2 B GLN 3 n 3 GLN 3 B MET 4 n 4 MET 4 B THR 5 n 5 THR 5 B GLN 6 n 6 GLN 6 B SER 7 n 7 SER 7 B PRO 8 n 8 PRO 8 B SER 9 n 9 SER 9 B SER 10 n 10 SER 10 B LEU 11 n 11 LEU 11 B SER 12 n 12 SER 12 B ALA 13 n 13 ALA 13 B SER 14 n 14 SER 14 B VAL 15 n 15 VAL 15 B GLY 16 n 16 GLY 16 B ASP 17 n 17 ASP 17 B ARG 18 n 18 ARG 18 B VAL 19 n 19 VAL 19 B THR 20 n 20 THR 20 B ILE 21 n 21 ILE 21 B THR 22 n 22 THR 22 B CYS 23 n 23 CYS 23 B GLN 24 n 24 GLN 24 B ALA 25 n 25 ALA 25 B SER 26 n 26 SER 26 B GLN 27 n 27 GLN 27 B ASP 28 n 28 ASP 28 B ILE 29 n 29 ILE 29 B SER 30 n 30 SER 30 B ASP 31 n 31 ASP 31 B TYR 32 n 32 TYR 32 B LEU 33 n 33 LEU 33 B ILE 34 n 34 ILE 34 B TRP 35 n 35 TRP 35 B TYR 36 n 36 TYR 36 B GLN 37 n 37 GLN 37 B GLN 38 n 38 GLN 38 B LYS 39 n 39 LYS 39 B LEU 40 n 40 LEU 40 B GLY 41 n 41 GLY 41 B LYS 42 n 42 LYS 42 B ALA 43 n 43 ALA 43 B PRO 44 n 44 PRO 44 B ASN 45 n 45 ASN 45 B LEU 46 n 46 LEU 46 B LEU 47 n 47 LEU 47 B ILE 48 n 48 ILE 48 B TYR 49 n 49 TYR 49 B ASP 50 n 50 ASP 50 B ALA 51 n 51 ALA 51 B SER 52 n 52 SER 52 B THR 53 n 53 THR 53 B LEU 54 n 54 LEU 54 B GLU 55 n 55 GLU 55 B THR 56 n 56 THR 56 B GLY 57 n 57 GLY 57 B VAL 58 n 58 VAL 58 B PRO 59 n 59 PRO 59 B SER 60 n 60 SER 60 B ARG 61 n 61 ARG 61 B PHE 62 n 62 PHE 62 B SER 63 n 63 SER 63 B GLY 64 n 64 GLY 64 B SER 65 n 65 SER 65 B GLY 66 n 66 GLY 66 B SER 67 n 67 SER 67 B GLY 68 n 68 GLY 68 B THR 69 n 69 THR 69 B GLU 70 n 70 GLU 70 B TYR 71 n 71 TYR 71 B THR 72 n 72 THR 72 B PHE 73 n 73 PHE 73 B THR 74 n 74 THR 74 B ILE 75 n 75 ILE 75 B SER 76 n 76 SER 76 B SER 77 n 77 SER 77 B LEU 78 n 78 LEU 78 B GLN 79 n 79 GLN 79 B PRO 80 n 80 PRO 80 B GLU 81 n 81 GLU 81 B ASP 82 n 82 ASP 82 B ILE 83 n 83 ILE 83 B ALA 84 n 84 ALA 84 B THR 85 n 85 THR 85 B TYR 86 n 86 TYR 86 B TYR 87 n 87 TYR 87 B CYS 88 n 88 CYS 88 B GLN 89 n 89 GLN 89 B GLN 90 n 90 GLN 90 B TYR 91 n 91 TYR 91 B ASP 92 n 92 ASP 92 B ASP 93 n 93 ASP 93 B LEU 94 n 94 LEU 94 B PRO 95 n 95 PRO 95 B TYR 96 n 96 TYR 96 B THR 97 n 97 THR 97 B PHE 98 n 98 PHE 98 B GLY 99 n 99 GLY 99 B GLN 100 n 100 GLN 100 B GLY 101 n 101 GLY 101 B THR 102 n 102 THR 102 B LYS 103 n 103 LYS 103 B VAL 104 n 104 VAL 104 B GLU 105 n 105 GLU 105 B ILE 106 n 106 ILE 106 B LYS 107 n 107 LYS 107 B ARG 108 n 108 ARG 108 B ASP 1 n 1 ASP 1 C ILE 2 n 2 ILE 2 C GLN 3 n 3 GLN 3 C MET 4 n 4 MET 4 C THR 5 n 5 THR 5 C GLN 6 n 6 GLN 6 C SER 7 n 7 SER 7 C PRO 8 n 8 PRO 8 C SER 9 n 9 SER 9 C SER 10 n 10 SER 10 C LEU 11 n 11 LEU 11 C SER 12 n 12 SER 12 C ALA 13 n 13 ALA 13 C SER 14 n 14 SER 14 C VAL 15 n 15 VAL 15 C GLY 16 n 16 GLY 16 C ASP 17 n 17 ASP 17 C ARG 18 n 18 ARG 18 C VAL 19 n 19 VAL 19 C THR 20 n 20 THR 20 C ILE 21 n 21 ILE 21 C THR 22 n 22 THR 22 C CYS 23 n 23 CYS 23 C GLN 24 n 24 GLN 24 C ALA 25 n 25 ALA 25 C SER 26 n 26 SER 26 C GLN 27 n 27 GLN 27 C ASP 28 n 28 ASP 28 C ILE 29 n 29 ILE 29 C SER 30 n 30 SER 30 C ASP 31 n 31 ASP 31 C TYR 32 n 32 TYR 32 C LEU 33 n 33 LEU 33 C ILE 34 n 34 ILE 34 C TRP 35 n 35 TRP 35 C TYR 36 n 36 TYR 36 C GLN 37 n 37 GLN 37 C GLN 38 n 38 GLN 38 C LYS 39 n 39 LYS 39 C LEU 40 n 40 LEU 40 C GLY 41 n 41 GLY 41 C LYS 42 n 42 LYS 42 C ALA 43 n 43 ALA 43 C PRO 44 n 44 PRO 44 C ASN 45 n 45 ASN 45 C LEU 46 n 46 LEU 46 C LEU 47 n 47 LEU 47 C ILE 48 n 48 ILE 48 C TYR 49 n 49 TYR 49 C ASP 50 n 50 ASP 50 C ALA 51 n 51 ALA 51 C SER 52 n 52 SER 52 C THR 53 n 53 THR 53 C LEU 54 n 54 LEU 54 C GLU 55 n 55 GLU 55 C THR 56 n 56 THR 56 C GLY 57 n 57 GLY 57 C VAL 58 n 58 VAL 58 C PRO 59 n 59 PRO 59 C SER 60 n 60 SER 60 C ARG 61 n 61 ARG 61 C PHE 62 n 62 PHE 62 C SER 63 n 63 SER 63 C GLY 64 n 64 GLY 64 C SER 65 n 65 SER 65 C GLY 66 n 66 GLY 66 C SER 67 n 67 SER 67 C GLY 68 n 68 GLY 68 C THR 69 n 69 THR 69 C GLU 70 n 70 GLU 70 C TYR 71 n 71 TYR 71 C THR 72 n 72 THR 72 C PHE 73 n 73 PHE 73 C THR 74 n 74 THR 74 C ILE 75 n 75 ILE 75 C SER 76 n 76 SER 76 C SER 77 n 77 SER 77 C LEU 78 n 78 LEU 78 C GLN 79 n 79 GLN 79 C PRO 80 n 80 PRO 80 C GLU 81 n 81 GLU 81 C ASP 82 n 82 ASP 82 C ILE 83 n 83 ILE 83 C ALA 84 n 84 ALA 84 C THR 85 n 85 THR 85 C TYR 86 n 86 TYR 86 C TYR 87 n 87 TYR 87 C CYS 88 n 88 CYS 88 C GLN 89 n 89 GLN 89 C GLN 90 n 90 GLN 90 C TYR 91 n 91 TYR 91 C ASP 92 n 92 ASP 92 C ASP 93 n 93 ASP 93 C LEU 94 n 94 LEU 94 C PRO 95 n 95 PRO 95 C TYR 96 n 96 TYR 96 C THR 97 n 97 THR 97 C PHE 98 n 98 PHE 98 C GLY 99 n 99 GLY 99 C GLN 100 n 100 GLN 100 C GLY 101 n 101 GLY 101 C THR 102 n 102 THR 102 C LYS 103 n 103 LYS 103 C VAL 104 n 104 VAL 104 C GLU 105 n 105 GLU 105 C ILE 106 n 106 ILE 106 C LYS 107 n 107 LYS 107 C ARG 108 n 108 ARG 108 C author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O THR 5 A O THR 5 A N GLN 24 A N GLN 24 A O VAL 19 A O VAL 19 A N ILE 75 A N ILE 75 A O GLU 70 A O GLU 70 A N SER 67 A N SER 67 A O LEU 11 A O LEU 11 A N LYS 103 A N LYS 103 A O THR 102 A O THR 102 A N TYR 86 A N TYR 86 A O THR 85 A O THR 85 A N GLN 38 A N GLN 38 A O TRP 35 A O TRP 35 A N ILE 48 A N ILE 48 B O THR 5 B O THR 5 B N GLN 24 B N GLN 24 B O VAL 19 B O VAL 19 B N ILE 75 B N ILE 75 B O GLU 70 B O GLU 70 B N SER 67 B N SER 67 B O LEU 11 B O LEU 11 B N LYS 103 B N LYS 103 B O THR 102 B O THR 102 B N TYR 86 B N TYR 86 B O THR 85 B O THR 85 B N GLN 38 B N GLN 38 B O TRP 35 B O TRP 35 B N ILE 48 B N ILE 48 C O THR 5 C O THR 5 C N GLN 24 C N GLN 24 C O VAL 19 C O VAL 19 C N ILE 75 C N ILE 75 C O GLU 70 C O GLU 70 C N SER 67 C N SER 67 C O LEU 11 C O LEU 11 C N LYS 103 C N LYS 103 C O THR 102 C O THR 102 C N TYR 86 C N TYR 86 C O THR 85 C O THR 85 C N GLN 38 C N GLN 38 C O TRP 35 C O TRP 35 C N ILE 48 C N ILE 48 1 13.96 2.30 115.30 129.26 A A A CA CB CG LEU LEU LEU 11 11 11 N 1 13.88 2.30 115.30 129.18 C C C CA CB CG LEU LEU LEU 11 11 11 N 1 A ASP 31 74.04 -2.23 1 A ALA 51 63.51 -37.37 1 A ALA 84 -179.81 -168.02 1 B ALA 51 75.47 -34.41 1 B ALA 84 177.39 -171.79 1 C ALA 51 69.33 -43.78 PARHCSDX.PRO TOPHCSDX.PRO PARAM19.SOL TOPH19.SOL TOPH19.PEP 25.3 0.299 0.226 1.80 5.00 1568 31772 5.0 77.3 RANDOM 1 THROUGHOUT 2.0 MOLECULAR REPLACEMENT PDB ENTRY 1BRE 0.28 5.00 0.33 1.80 5.00 104 2624 0 0 2520 0.011 1.84 26.9 1.50 0.419 0.384 1.88 136 2535 8 5.4 53.8 17.7 1.75 52.5 1B0W 35142 1 0.071 0.047 1 7.5 2.3 76 0.218 1.75 2.00 1.92 0.255 1.8 56 data collection bioteX data reduction bioteX phasing AMoRE refinement X-PLOR 3.1 data scaling bioteX Structural comparison of amyloidogenic light chain dimer in two crystal forms with nonamyloidogenic counterparts 1 N N 1 N N 1 N N 2 N N 2 N N 2 N N monomer A PRO 80 A PRO 80 HELX_P A ASP 82 A ASP 82 5 1 3 B PRO 80 B PRO 80 HELX_P B ASP 82 B ASP 82 5 2 3 C PRO 80 C PRO 80 HELX_P C ASP 82 C ASP 82 5 3 3 disulf 2.031 A CYS 23 A SG CYS 23 1_555 A CYS 88 A SG CYS 88 1_555 disulf 2.017 B CYS 23 B SG CYS 23 1_555 B CYS 88 B SG CYS 88 1_555 disulf 2.033 C CYS 23 C SG CYS 23 1_555 C CYS 88 C SG CYS 88 1_555 IMMUNE SYSTEM IMMUNOGLOBULIN, AMYLOID, IMMUNE SYSTEM A SER 7 A SER 7 1 A PRO 8 A PRO 8 -0.33 A LEU 94 A LEU 94 1 A PRO 95 A PRO 95 -0.26 B SER 7 B SER 7 1 B PRO 8 B PRO 8 0.10 B LEU 94 B LEU 94 1 B PRO 95 B PRO 95 -0.26 C SER 7 C SER 7 1 C PRO 8 C PRO 8 -0.40 C LEU 94 C LEU 94 1 C PRO 95 C PRO 95 -0.13 given -0.498320 -0.866990 0.001570 0.866990 0.498310 -0.004420 0.003050 0.003570 0.999990 61.57912 35.67698 12.75636 given -0.498900 -0.866660 0.002470 0.866660 0.498900 0.000480 -0.000820 -0.002380 1.000000 -61.69847 35.61665 -12.67716 given -0.502790 0.864400 0.004440 -0.864400 -0.502800 0.001710 0.003710 -0.002980 0.999990 -61.54691 106.75963 -25.65269 KV1B_HUMAN UNP 1 P01594 1 108 1B0W 1 108 P01594 A 1 1 108 1 108 1B0W 1 108 P01594 B 1 1 108 1 108 1B0W 1 108 P01594 C 1 1 108 4 5 4 5 4 5 anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel A MET 4 A MET 4 A SER 7 A SER 7 A VAL 19 A VAL 19 A ALA 25 A ALA 25 A GLU 70 A GLU 70 A ILE 75 A ILE 75 A PHE 62 A PHE 62 A SER 67 A SER 67 A SER 10 A SER 10 A ALA 13 A ALA 13 A THR 102 A THR 102 A ILE 106 A ILE 106 A ALA 84 A ALA 84 A GLN 90 A GLN 90 A LEU 33 A LEU 33 A GLN 38 A GLN 38 A ASN 45 A ASN 45 A ILE 48 A ILE 48 B MET 4 B MET 4 B SER 7 B SER 7 B VAL 19 B VAL 19 B ALA 25 B ALA 25 B GLU 70 B GLU 70 B ILE 75 B ILE 75 B PHE 62 B PHE 62 B SER 67 B SER 67 B SER 10 B SER 10 B ALA 13 B ALA 13 B THR 102 B THR 102 B ILE 106 B ILE 106 B ALA 84 B ALA 84 B GLN 90 B GLN 90 B LEU 33 B LEU 33 B GLN 38 B GLN 38 B ASN 45 B ASN 45 B ILE 48 B ILE 48 C MET 4 C MET 4 C SER 7 C SER 7 C VAL 19 C VAL 19 C ALA 25 C ALA 25 C GLU 70 C GLU 70 C ILE 75 C ILE 75 C PHE 62 C PHE 62 C SER 67 C SER 67 C SER 10 C SER 10 C ALA 13 C ALA 13 C THR 102 C THR 102 C ILE 106 C ILE 106 C ALA 84 C ALA 84 C GLN 90 C GLN 90 C LEU 33 C LEU 33 C GLN 38 C GLN 38 C ASN 45 C ASN 45 C ILE 48 C ILE 48 20 C 2 2 21