0.007889
0.000000
0.000000
0.000000
0.007520
0.000000
0.000000
0.000000
0.006457
0.00000
0.00000
0.00000
Nissen, P.
Kjeldgaard, M.
Thirup, S.
Nyborg, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
126.750
132.980
154.880
C9 H13 N2 O8 P S
340.247
n
4-THIOURIDINE-5'-MONOPHOSPHATE
RNA linking
C10 H15 N2 O9 P
338.208
n
5-METHYLURIDINE 5'-MONOPHOSPHATE
RNA linking
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C9 H14 N3 O8 P
323.197
y
CYTIDINE-5'-MONOPHOSPHATE
RNA linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C10 H17 N6 O13 P3
522.196
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
non-polymer
C9 H15 N2 O9 P
326.197
n
5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
RNA linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C16 H24 N5 O7 P S
461.430
n
2-METHYLTHIO-N6-ISOPENTENYL-ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C9 H13 N2 O9 P
324.181
n
PSEUDOURIDINE-5'-MONOPHOSPHATE
RNA linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C9 H13 N2 O9 P
324.181
y
URIDINE-5'-MONOPHOSPHATE
RNA linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
N
C
N
3
N
N
N
4
N
C
N
5
N
C
N
6
N
C
N
7
N
O
N
8
N
S
N
9
R
C
N
10
R
C
N
11
N
O
N
12
S
C
N
13
R
C
N
14
N
O
N
15
N
O
N
16
N
C
N
17
N
O
N
18
N
P
N
19
N
O
N
20
N
O
N
21
N
O
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
N
N
36
N
C
N
37
N
N
N
38
N
C
N
39
N
C
N
40
N
C
N
41
N
C
N
42
N
O
N
43
N
O
N
44
R
C
N
45
R
C
N
46
N
O
N
47
S
C
N
48
R
C
N
49
N
O
N
50
N
O
N
51
N
C
N
52
N
O
N
53
N
P
N
54
N
O
N
55
N
O
N
56
N
O
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
O
N
73
N
P
N
74
N
O
N
75
N
O
N
76
N
O
N
77
N
C
N
78
R
C
N
79
N
O
N
80
S
C
N
81
N
O
N
82
R
C
N
83
N
O
N
84
R
C
Y
85
N
N
Y
86
N
C
Y
87
N
N
Y
88
N
C
Y
89
N
C
N
90
N
N
Y
91
N
N
Y
92
N
C
Y
93
N
N
Y
94
N
C
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
O
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
N
N
123
S
C
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
C
N
128
N
C
N
129
N
N
N
130
N
C
N
131
N
N
N
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
N
N
150
S
C
N
151
N
C
N
152
N
O
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
N
N
157
N
O
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
N
N
167
S
C
N
168
N
C
N
169
N
O
N
170
N
C
N
171
N
C
N
172
N
O
N
173
N
O
N
174
N
O
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
O
N
183
N
P
N
184
N
O
N
185
N
O
N
186
N
O
N
187
N
C
N
188
R
C
N
189
N
O
N
190
S
C
N
191
N
O
N
192
R
C
N
193
N
O
N
194
R
C
N
195
N
N
N
196
N
C
N
197
N
O
N
198
N
N
N
199
N
C
N
200
N
N
N
201
N
C
N
202
N
C
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
N
N
218
R
C
N
219
N
C
N
220
N
O
N
221
N
C
N
222
N
S
N
223
N
O
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
O
N
232
N
P
N
233
N
O
N
234
N
O
N
235
N
O
N
236
N
C
N
237
R
C
N
238
N
O
N
239
S
C
N
240
N
O
N
241
R
C
N
242
N
O
N
243
R
C
Y
244
N
N
Y
245
N
C
Y
246
N
N
Y
247
N
C
N
248
N
C
N
249
N
O
N
250
N
N
N
251
N
C
N
252
N
N
N
253
N
N
Y
254
N
C
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
N
N
270
S
C
N
271
N
C
N
272
N
O
N
273
N
C
N
274
N
C
N
275
N
C
N
276
N
O
N
277
N
N
N
278
N
O
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
N
N
290
S
C
N
291
N
C
N
292
N
O
N
293
N
C
N
294
N
C
N
295
N
C
N
296
N
O
N
297
N
O
N
298
N
O
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
N
N
309
N
C
N
310
N
C
N
311
N
O
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
P
N
319
N
O
N
320
N
O
N
321
N
O
N
322
N
N
N
323
R
P
N
324
N
O
N
325
N
O
N
326
N
O
N
327
S
P
N
328
N
O
N
329
N
O
N
330
N
O
N
331
N
C
N
332
R
C
N
333
N
O
N
334
S
C
N
335
N
O
N
336
R
C
N
337
N
O
N
338
R
C
Y
339
N
N
Y
340
N
C
Y
341
N
N
Y
342
N
C
Y
343
N
C
N
344
N
O
Y
345
N
N
Y
346
N
C
N
347
N
N
Y
348
N
N
Y
349
N
C
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
P
N
368
N
O
N
369
N
O
N
370
N
O
N
371
N
O
N
372
N
C
N
373
R
C
N
374
N
O
N
375
S
C
N
376
N
O
N
377
R
C
N
378
R
C
N
379
N
O
N
380
N
N
N
381
N
C
N
382
N
O
N
383
N
N
N
384
N
C
N
385
N
O
N
386
N
C
N
387
N
C
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
N
N
404
S
C
N
405
N
C
N
406
N
O
N
407
N
C
Y
408
N
C
Y
409
N
N
Y
410
N
C
Y
411
N
C
Y
412
N
N
N
413
N
O
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
O
N
425
N
H
N
426
N
H
N
427
N
N
N
428
S
C
N
429
N
C
N
430
N
O
N
431
S
C
N
432
N
C
N
433
N
C
N
434
N
C
N
435
N
O
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
N
N
450
S
C
N
451
N
C
N
452
N
O
N
453
N
C
N
454
N
C
N
455
N
C
N
456
N
C
N
457
N
O
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
N
N
472
S
C
N
473
N
C
N
474
N
O
N
475
N
C
N
476
N
C
N
477
N
C
N
478
N
C
N
479
N
N
N
480
N
O
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
N
N
497
S
C
N
498
N
C
N
499
N
O
N
500
N
C
N
501
N
C
N
502
N
S
N
503
N
C
N
504
N
O
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
H
N
516
N
MG
N
517
N
O
N
518
N
P
N
519
N
O
N
520
N
O
N
521
N
O
N
522
N
C
N
523
R
C
N
524
N
O
N
525
S
C
N
526
N
O
N
527
R
C
N
528
N
O
N
529
R
C
Y
530
N
N
Y
531
N
C
Y
532
N
N
Y
533
N
C
Y
534
N
C
N
535
N
N
Y
536
N
N
Y
537
N
C
Y
538
N
N
Y
539
N
C
N
540
N
S
N
541
N
C
N
542
N
C
N
543
N
C
N
544
N
C
N
545
N
C
N
546
N
C
N
547
N
H
N
548
N
H
N
549
N
H
N
550
N
H
N
551
N
H
N
552
N
H
N
553
N
H
N
554
N
H
N
555
N
H
N
556
N
H
N
557
N
H
N
558
N
H
N
559
N
H
N
560
N
H
N
561
N
H
N
562
N
H
N
563
N
H
N
564
N
H
N
565
N
H
N
566
N
H
N
567
N
H
N
568
N
H
N
569
N
H
N
570
N
H
N
571
N
N
N
572
S
C
N
573
N
C
N
574
N
O
N
575
N
C
Y
576
N
C
Y
577
N
C
Y
578
N
C
Y
579
N
C
Y
580
N
C
Y
581
N
C
N
582
N
O
N
583
N
H
N
584
N
H
N
585
N
H
N
586
N
H
N
587
N
H
N
588
N
H
N
589
N
H
N
590
N
H
N
591
N
H
N
592
N
H
N
593
N
H
N
594
N
N
N
595
S
C
N
596
N
C
N
597
N
O
N
598
N
C
N
599
N
C
N
600
N
C
N
601
N
O
N
602
N
H
N
603
N
H
N
604
N
H
N
605
N
H
N
606
N
H
N
607
N
H
N
608
N
H
N
609
N
H
N
610
N
H
N
611
N
N
N
612
N
C
N
613
N
N
N
614
N
C
N
615
N
C
N
616
N
C
N
617
N
O
N
618
N
O
N
619
S
C
N
620
R
C
N
621
N
O
N
622
S
C
N
623
R
C
N
624
N
O
N
625
N
O
N
626
N
C
N
627
N
O
N
628
N
P
N
629
N
O
N
630
N
O
N
631
N
O
N
632
N
H
N
633
N
H
N
634
N
H
N
635
N
H
N
636
N
H
N
637
N
H
N
638
N
H
N
639
N
H
N
640
N
H
N
641
N
H
N
642
N
H
N
643
N
H
N
644
N
H
N
645
N
N
N
646
S
C
N
647
N
C
N
648
N
O
N
649
N
C
N
650
N
O
N
651
N
O
N
652
N
H
N
653
N
H
N
654
N
H
N
655
N
H
N
656
N
H
N
657
N
H
N
658
N
H
N
659
N
S
N
660
N
O
N
661
N
O
N
662
N
O
N
663
N
O
N
664
N
N
N
665
S
C
N
666
N
C
N
667
N
O
N
668
R
C
N
669
N
O
N
670
N
C
N
671
N
O
N
672
N
H
N
673
N
H
N
674
N
H
N
675
N
H
N
676
N
H
N
677
N
H
N
678
N
H
N
679
N
H
N
680
N
H
N
681
N
N
N
682
S
C
N
683
N
C
N
684
N
O
N
685
N
C
Y
686
N
C
Y
687
N
C
Y
688
N
C
Y
689
N
N
Y
690
N
C
Y
691
N
C
Y
692
N
C
Y
693
N
C
Y
694
N
C
N
695
N
O
N
696
N
H
N
697
N
H
N
698
N
H
N
699
N
H
N
700
N
H
N
701
N
H
N
702
N
H
N
703
N
H
N
704
N
H
N
705
N
H
N
706
N
H
N
707
N
H
N
708
N
N
N
709
S
C
N
710
N
C
N
711
N
O
N
712
N
C
Y
713
N
C
Y
714
N
C
Y
715
N
C
Y
716
N
C
Y
717
N
C
Y
718
N
C
N
719
N
O
N
720
N
O
N
721
N
H
N
722
N
H
N
723
N
H
N
724
N
H
N
725
N
H
N
726
N
H
N
727
N
H
N
728
N
H
N
729
N
H
N
730
N
H
N
731
N
H
N
732
N
O
N
733
N
P
N
734
N
O
N
735
N
O
N
736
N
O
N
737
N
C
N
738
R
C
N
739
N
O
N
740
S
C
N
741
N
O
N
742
R
C
N
743
N
O
N
744
R
C
N
745
N
N
N
746
N
C
N
747
N
O
N
748
N
N
N
749
N
C
N
750
N
O
N
751
N
C
N
752
N
C
N
753
N
H
N
754
N
H
N
755
N
H
N
756
N
H
N
757
N
H
N
758
N
H
N
759
N
H
N
760
N
H
N
761
N
H
N
762
N
H
N
763
N
H
N
764
N
H
N
765
N
H
N
766
N
N
N
767
S
C
N
768
N
C
N
769
N
O
N
770
N
C
N
771
N
C
N
772
N
C
N
773
N
O
N
774
N
H
N
775
N
H
N
776
N
H
N
777
N
H
N
778
N
H
N
779
N
H
N
780
N
H
N
781
N
H
N
782
N
H
N
783
N
H
N
784
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
doub
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
doub
N
10
N
doub
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
doub
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
doub
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
doub
N
45
N
sing
N
46
N
doub
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
doub
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
Y
98
N
sing
Y
99
N
sing
Y
100
N
doub
N
101
N
sing
Y
102
N
sing
Y
103
N
sing
Y
104
N
doub
N
105
N
sing
Y
106
N
doub
N
107
N
sing
N
108
N
sing
Y
109
N
sing
Y
110
N
doub
N
111
N
sing
Y
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
doub
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
doub
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
doub
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
doub
N
209
N
sing
N
210
N
doub
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
doub
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
Y
255
N
sing
Y
256
N
sing
Y
257
N
doub
N
258
N
sing
Y
259
N
sing
N
260
N
sing
Y
261
N
doub
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
doub
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
doub
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
doub
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
doub
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
doub
N
315
N
sing
N
316
N
sing
N
317
N
doub
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
doub
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
Y
352
N
sing
Y
353
N
sing
Y
354
N
doub
N
355
N
sing
Y
356
N
sing
Y
357
N
sing
Y
358
N
doub
N
359
N
doub
Y
360
N
sing
Y
361
N
sing
N
362
N
sing
N
363
N
sing
Y
364
N
doub
N
365
N
sing
N
366
N
sing
Y
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
doub
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
doub
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
Y
416
N
sing
Y
417
N
doub
Y
418
N
doub
N
419
N
sing
Y
420
N
sing
N
421
N
sing
Y
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
doub
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
doub
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
doub
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
doub
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
doub
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
N
535
N
sing
N
536
N
sing
Y
537
N
sing
Y
538
N
sing
Y
539
N
doub
N
540
N
sing
Y
541
N
sing
Y
542
N
sing
Y
543
N
doub
N
544
N
sing
Y
545
N
doub
N
546
N
sing
N
547
N
sing
Y
548
N
sing
Y
549
N
doub
N
550
N
sing
Y
551
N
sing
N
552
N
sing
N
553
N
sing
N
554
N
sing
N
555
N
sing
N
556
N
sing
N
557
N
sing
N
558
N
sing
N
559
N
doub
N
560
N
sing
N
561
N
sing
N
562
N
sing
N
563
N
sing
N
564
N
sing
N
565
N
sing
N
566
N
sing
N
567
N
sing
N
568
N
sing
N
569
N
sing
N
570
N
sing
N
571
N
sing
N
572
N
sing
N
573
N
sing
N
574
N
sing
N
575
N
doub
N
576
N
sing
N
577
N
sing
N
578
N
sing
N
579
N
sing
Y
580
N
doub
Y
581
N
sing
Y
582
N
sing
N
583
N
sing
Y
584
N
doub
N
585
N
sing
Y
586
N
doub
N
587
N
sing
Y
588
N
sing
N
589
N
sing
N
590
N
sing
N
591
N
sing
N
592
N
sing
N
593
N
sing
N
594
N
sing
N
595
N
sing
N
596
N
sing
N
597
N
sing
N
598
N
doub
N
599
N
sing
N
600
N
sing
N
601
N
sing
N
602
N
sing
N
603
N
sing
N
604
N
sing
N
605
N
sing
N
606
N
sing
N
607
N
sing
N
608
N
sing
N
609
N
sing
N
610
N
sing
N
611
N
sing
N
612
N
sing
N
613
N
doub
N
614
N
sing
N
615
N
sing
N
616
N
sing
N
617
N
doub
N
618
N
doub
N
619
N
sing
N
620
N
sing
N
621
N
sing
N
622
N
sing
N
623
N
sing
N
624
N
sing
N
625
N
sing
N
626
N
sing
N
627
N
sing
N
628
N
sing
N
629
N
sing
N
630
N
sing
N
631
N
sing
N
632
N
sing
N
633
N
sing
N
634
N
sing
N
635
N
sing
N
636
N
sing
N
637
N
sing
N
638
N
sing
N
639
N
doub
N
640
N
sing
N
641
N
sing
N
642
N
sing
N
643
N
sing
N
644
N
sing
N
645
N
sing
N
646
N
sing
N
647
N
sing
N
648
N
sing
N
649
N
sing
N
650
N
doub
N
651
N
sing
N
652
N
sing
N
653
N
sing
N
654
N
sing
N
655
N
sing
N
656
N
sing
N
657
N
doub
N
658
N
doub
N
659
N
sing
N
660
N
sing
N
661
N
sing
N
662
N
sing
N
663
N
sing
N
664
N
sing
N
665
N
sing
N
666
N
sing
N
667
N
doub
N
668
N
sing
N
669
N
sing
N
670
N
sing
N
671
N
sing
N
672
N
sing
N
673
N
sing
N
674
N
sing
N
675
N
sing
N
676
N
sing
N
677
N
sing
N
678
N
sing
N
679
N
sing
N
680
N
sing
N
681
N
sing
N
682
N
sing
N
683
N
doub
N
684
N
sing
N
685
N
sing
N
686
N
sing
N
687
N
sing
Y
688
N
doub
Y
689
N
sing
Y
690
N
sing
N
691
N
sing
Y
692
N
doub
Y
693
N
sing
Y
694
N
sing
N
695
N
sing
Y
696
N
sing
Y
697
N
doub
N
698
N
sing
Y
699
N
doub
N
700
N
sing
Y
701
N
sing
N
702
N
sing
N
703
N
sing
N
704
N
sing
N
705
N
sing
N
706
N
sing
N
707
N
sing
N
708
N
sing
N
709
N
sing
N
710
N
sing
N
711
N
doub
N
712
N
sing
N
713
N
sing
N
714
N
sing
N
715
N
sing
Y
716
N
doub
Y
717
N
sing
Y
718
N
sing
N
719
N
sing
Y
720
N
doub
N
721
N
sing
Y
722
N
doub
N
723
N
sing
Y
724
N
sing
N
725
N
sing
N
726
N
sing
N
727
N
sing
N
728
N
sing
N
729
N
sing
N
730
N
sing
N
731
N
doub
N
732
N
sing
N
733
N
sing
N
734
N
sing
N
735
N
sing
N
736
N
sing
N
737
N
sing
N
738
N
sing
N
739
N
sing
N
740
N
sing
N
741
N
sing
N
742
N
sing
N
743
N
sing
N
744
N
sing
N
745
N
sing
N
746
N
sing
N
747
N
sing
N
748
N
sing
N
749
N
sing
N
750
N
sing
N
751
N
sing
N
752
N
sing
N
753
N
sing
N
754
N
sing
N
755
N
doub
N
756
N
sing
N
757
N
sing
N
758
N
sing
N
759
N
doub
N
760
N
sing
N
761
N
doub
N
762
N
sing
N
763
N
sing
N
764
N
sing
N
765
N
sing
N
766
N
sing
N
767
N
sing
N
768
N
sing
N
769
N
sing
N
770
N
doub
N
771
N
sing
N
772
N
sing
N
773
N
sing
N
774
N
sing
N
775
N
sing
N
776
N
sing
N
777
N
sing
N
778
N
sing
N
779
N
sing
N
780
N
sing
N
781
N
sing
UK
Structure Fold.Des.
FODEFH
1263
0969-2126
7
143
156
10.1016/S0969-2126(99)80021-5
10368282
The crystal structure of Cys-tRNACys-EF-Tu-GDPNP reveals general and specific features in the ternary complex and in tRNA.
1999
US
Science
SCIEAS
0038
0036-8075
270
1464
Crystal Structure of the Ternary Complex of Phe-tRNAphe, EF-TU, and a GTP Analog
1995
10.2210/pdb1b23/pdb
pdb_00001b23
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
1997-04-15
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
1.098
1.0
X11
EMBL/DESY, HAMBURG
1.098
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE X11
AMINOACYL LINK BETWEEN A76 AND CYS77
23927.459
CYSTEINYL TRNA
1
man
polymer
44742.980
ELONGATION FACTOR TU
1
man
polymer
24.305
MAGNESIUM ION
3
syn
non-polymer
121.158
CYSTEINE
1
syn
non-polymer
96.063
SULFATE ION
2
syn
non-polymer
522.196
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
1
syn
non-polymer
18.015
water
261
nat
water
CYS-TRNA
EF-TU
no
yes
GGCGCGU(4SU)AACAAAGCGG(H2U)(H2U)AUGUAGCGGA(PSU)UGCA(MIA)A(PSU)CCGUCUAGUCCGG(5MU)
(PSU)CGACUCCGGAACGCGCCUCCA
GGCGCGUUAACAAAGCGGUUAUGUAGCGGAUUGCAAAUCCGUCUAGUCCGGUUCGACUCCGGAACGCGCCUCCA
R
polyribonucleotide
no
no
AKGEFIRTKPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHV
DCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQ
YEFPGDEVPVIRGSALLALEEMHKNPKTKRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATG
RIERGKVKVGDEVEIVGLAPETRKTVVTGVEMHRKTLQEGIAGDNVGLLLRGVSREEVERGQVLAKPGSITPHTKFEASV
YILKKEEGGRHTGFFTGYRPQFYFRTTDVTGVVRLPQGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVV
TKILE
AKGEFIRTKPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHV
DCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQ
YEFPGDEVPVIRGSALLALEEMHKNPKTKRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATG
RIERGKVKVGDEVEIVGLAPETRKTVVTGVEMHRKTLQEGIAGDNVGLLLRGVSREEVERGQVLAKPGSITPHTKFEASV
YILKKEEGGRHTGFFTGYRPQFYFRTTDVTGVVRLPQGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVV
TKILE
P
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
sample
562
Escherichia coli
Thermus
YT-1
Escherichia
sample
TUFA
271
Thermus aquaticus
562
Escherichia coli
1
2.34
43
ANISOTROPIC DIFFRACTION
VAPOR DIFFUSION, HANGING DROP
6.7
2.1 M (NH4)2SO4, 30 MM TRIS, 5 MM MES, 10 MM MGCL2, 10 MM DTT, 1 MM GDPNP PH 6.7, 4 DEG. C, HANGING DROP, vapor diffusion - hanging drop, temperature 277K
277
(NH4)2SO4
1
TRIS
1
MES
1
MGCL2
1
DTT
1
GDPNP
1
-13.543
1
19
R
1
R
72
0.854
R_G1:C72_R
1
-22.116
-0.488
0.308
-0.354
-35.499
1
19
R
2
R
71
3.674
R_G2:C71_R
2
-16.944
-0.454
-1.387
0.071
-2.157
1
19
R
3
R
70
-2.525
R_C3:G70_R
3
-6.226
0.425
-0.410
0.098
-10.974
1
19
R
4
R
69
5.175
R_G4:C69_R
4
-13.961
-0.868
-0.521
-0.240
12.839
1
R
5
R
68
16.027
R_C5:G68_R
5
-18.605
0.801
-0.027
0.154
-3.521
1
19
R
6
R
67
12.308
R_G6:C67_R
6
-22.848
-0.791
-0.359
-0.047
15.969
1
20
R
7
R
66
8.258
R_U7:A66_R
7
-27.377
0.520
-0.495
-0.208
16.470
1
20
R
49
R
65
-5.006
R_U49:A65_R
8
-2.161
-0.591
0.375
-0.350
15.210
1
19
R
50
R
64
1.241
R_C50:G64_R
9
-16.681
0.893
-0.099
-0.131
-15.857
1
19
R
51
R
63
4.361
R_C51:G63_R
10
-0.137
0.803
1.126
-0.243
-18.839
1
19
R
52
R
62
-1.950
R_G52:C62_R
11
-7.140
-0.560
-0.789
-0.327
-29.484
1
19
R
53
R
61
5.408
R_G53:C61_R
12
-13.156
-0.645
-1.018
-0.201
-4.106
4
24
R
54
R
58
-97.814
R_5MU54:A58_R
13
13.601
4.571
-0.173
-2.298
20.056
2
R
55
R
18
-89.395
R_PSU55:G18_R
14
-7.892
0.629
0.177
-5.800
5.180
1
R
40
R
30
6.689
R_C40:G30_R
15
-12.671
-0.897
0.261
0.596
9.082
1
R
41
R
29
8.386
R_C41:G29_R
16
-13.153
0.001
0.012
0.265
-19.392
1
19
R
42
R
28
-0.803
R_G42:C28_R
17
-11.855
0.666
-0.696
-0.075
0.870
1
28
R
43
R
27
7.170
R_U43:G27_R
18
-17.642
1.960
0.003
-0.190
-6.435
R
44
R
26
-20.933
R_C44:A26_R
19
1.018
1.741
0.666
0.428
-0.853
1
R
10
R
25
6.335
R_A10:U25_R
20
-21.202
-1.692
0.811
-0.103
2.794
1
19
R
11
R
24
1.159
R_C11:G24_R
21
-15.751
0.649
0.671
-0.181
-3.785
1
R
12
R
23
18.912
R_A12:U23_R
22
2.542
0.310
-0.478
0.350
-27.404
4
5
R
13
R
9
-116.576
R_A13:A9_R
23
3.546
4.543
0.390
1.250
-5.737
R
14
R
46
115.099
R_A14:A46_R
24
-10.263
-2.614
-0.031
-1.034
-4.427
R
15
R
48
134.472
R_G15:G48_R
25
2.794
-2.213
0.367
-1.324
-3.379
2
15
R
16
R
59
176.699
R_C16:C59_R
26
16.542
1.763
0.600
1.213
-30.617
1
19
R
19
R
56
-0.617
R_G19:C56_R
27
-24.295
-0.024
0.182
-0.191
3.680
29.388
R
R
1
2
17.584
R
R
72
71
4.352
8.788
-0.723
-1.553
RR_G1G2:C71C72_RR
1
0.961
-1.923
28.055
-5.434
1.685
2.713
39.194
R
R
2
3
-2.868
R
R
71
70
2.636
-1.879
-0.624
-0.701
RR_G2C3:G70C71_RR
2
-14.680
22.400
36.394
-0.853
-0.564
2.319
25.121
R
R
3
4
27.920
R
R
70
69
3.477
11.673
0.244
-1.693
RR_C3G4:C69G70_RR
3
2.181
-5.217
22.177
-7.138
0.046
2.825
39.092
R
R
4
5
-5.646
R
R
69
68
2.825
-3.769
0.486
-0.651
RR_G4C5:G68C69_RR
4
-3.305
4.951
38.782
-0.581
-1.070
1.709
31.691
R
R
5
6
38.700
R
R
68
67
3.431
19.489
-0.168
-1.473
RR_C5G6:C67G68_RR
5
6.654
-13.212
24.219
-5.922
1.409
2.526
38.007
R
R
6
7
23.127
R
R
67
66
3.000
14.524
-0.222
-0.260
RR_G6U7:A66C67_RR
6
9.988
-15.905
33.807
-2.062
1.484
2.389
35.399
R
R
7
49
26.357
R
R
66
65
3.267
15.323
-0.535
-1.390
RR_U7U49:A65A66_RR
7
-9.382
16.139
30.627
-4.388
-0.408
3.299
40.896
R
R
49
50
-2.891
R
R
65
64
3.212
-2.019
0.021
-1.912
RR_U49C50:G64A65_RR
8
0.873
-1.250
40.839
-2.517
0.065
3.160
35.200
R
R
50
51
16.292
R
R
64
63
3.835
9.528
-0.641
-1.958
RR_C50C51:G63G64_RR
9
-12.393
21.190
31.637
-4.842
-1.027
2.290
26.012
R
R
51
52
4.923
R
R
63
62
3.067
2.148
-0.648
-2.822
RR_C51G52:C62G63_RR
10
10.834
-24.833
23.588
-6.777
4.000
3.272
37.049
R
R
52
53
13.589
R
R
62
61
3.766
8.561
0.513
-1.812
RR_G52G53:C61C62_RR
11
0.502
-0.796
36.077
-4.105
-0.734
2.964
94.014
R
R
53
54
-2.464
R
R
61
58
2.871
-3.604
-2.218
-1.383
RR_G535MU54:A58C61_RR
12
-3.038
2.077
93.924
-0.887
1.467
3.229
40.002
R
R
54
55
10.822
R
R
58
18
2.949
7.210
2.485
-2.021
RR_5MU54PSU55:G18A58_RR
13
14.380
-21.585
36.747
-3.773
-2.002
2.854
39.074
R
R
40
41
4.923
R
R
30
29
2.971
3.288
-0.739
-1.744
RR_C40C41:G29G30_RR
14
-2.067
3.095
38.888
-2.961
0.882
2.363
35.488
R
R
41
42
29.672
R
R
29
28
3.829
17.308
-0.269
-1.976
RR_C41G42:C28G29_RR
15
4.373
-7.497
30.796
-5.826
1.094
2.731
34.430
R
R
42
43
3.085
R
R
28
27
2.816
1.825
0.309
-1.548
RR_G42U43:G27C28_RR
16
-0.211
0.356
34.382
-2.856
-0.549
2.593
43.075
R
R
43
44
28.565
R
R
27
26
3.238
20.185
-0.527
-0.507
RR_U43C44:A26G27_RR
17
4.310
-6.099
38.016
-2.589
1.123
2.447
23.226
R
R
44
10
9.742
R
R
26
25
2.805
3.862
0.035
-1.350
RR_C44A10:U25A26_RR
18
-5.867
14.799
22.152
-4.449
-1.752
3.594
47.022
R
R
10
11
-7.237
R
R
25
24
3.426
-5.751
-0.619
-1.265
RR_A10C11:G24U25_RR
19
-5.117
6.440
46.423
-1.074
0.321
2.912
31.066
R
R
11
12
9.440
R
R
24
23
3.236
5.028
0.529
-2.010
RR_C11A12:U23G24_RR
20
2.816
-5.287
30.539
-4.668
-0.476
2.479
113.202
R
R
12
13
7.536
R
R
23
9
2.683
12.551
0.417
-3.076
RR_A12A13:A9U23_RR
21
16.876
-10.133
111.906
-1.955
-0.097
2.746
-124.893
R
R
13
14
-1.106
R
R
9
46
2.718
1.961
-3.144
-1.463
RR_A13A14:A46A9_RR
22
1.030
0.581
-124.881
0.811
-1.766
2.729
23.493
R
R
14
15
-10.678
R
R
46
48
3.106
-4.161
-0.015
-0.159
RR_A14G15:G48A46_RR
23
10.858
-27.865
20.449
0.950
3.538
2.705
17.267
R
R
15
16
-3.823
R
R
48
59
2.926
-1.104
-0.165
-0.575
RR_G15C16:C59G48_RR
24
-7.979
27.634
15.285
-1.282
-4.019
chem_comp
diffrn_source
entity
pdbx_unobs_or_zero_occ_atoms
struct_conn
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
pdbx_unobs_or_zero_occ_atoms
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Atomic model
Advisory
Data collection
Derived calculations
Non-polymer description
Structure summary
Advisory
Data collection
Database references
Derived calculations
Refinement description
1
0
1998-12-07
1
1
2008-04-26
1
2
2011-07-13
1
3
2011-11-16
2
0
2019-07-03
2
1
2023-08-09
_chem_comp.formula
_chem_comp.formula_weight
_diffrn_source.pdbx_synchrotron_site
_entity.formula_weight
_struct_conn.pdbx_leaving_atom_flag
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
BNL
Y
RCSB
1998-12-04
REL
REL
MG
MAGNESIUM ION
CYS
CYSTEINE
SO4
SULFATE ION
GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
HOH
water
1TTT
PDB ENTRY 1TTT
PDB
experimental model
MG
38
3
MG
MG
77
R
MG
179
3
MG
MG
179
R
CYS
976
4
CYS
CYS
976
R
MG
407
3
MG
MG
407
P
SO4
1
5
SO4
SO4
408
P
SO4
2
5
SO4
SO4
409
P
GNP
406
6
GNP
GNP
406
P
HOH
4
7
HOH
HOH
977
R
HOH
5
7
HOH
HOH
978
R
HOH
8
7
HOH
HOH
979
R
HOH
10
7
HOH
HOH
980
R
HOH
11
7
HOH
HOH
981
R
HOH
13
7
HOH
HOH
982
R
HOH
16
7
HOH
HOH
983
R
HOH
17
7
HOH
HOH
984
R
HOH
29
7
HOH
HOH
985
R
HOH
36
7
HOH
HOH
986
R
HOH
47
7
HOH
HOH
987
R
HOH
49
7
HOH
HOH
988
R
HOH
53
7
HOH
HOH
989
R
HOH
56
7
HOH
HOH
990
R
HOH
57
7
HOH
HOH
991
R
HOH
58
7
HOH
HOH
992
R
HOH
64
7
HOH
HOH
993
R
HOH
66
7
HOH
HOH
994
R
HOH
67
7
HOH
HOH
995
R
HOH
68
7
HOH
HOH
996
R
HOH
69
7
HOH
HOH
997
R
HOH
70
7
HOH
HOH
998
R
HOH
71
7
HOH
HOH
999
R
HOH
72
7
HOH
HOH
1000
R
HOH
75
7
HOH
HOH
1001
R
HOH
77
7
HOH
HOH
1002
R
HOH
78
7
HOH
HOH
1003
R
HOH
79
7
HOH
HOH
1004
R
HOH
80
7
HOH
HOH
1005
R
HOH
81
7
HOH
HOH
1006
R
HOH
98
7
HOH
HOH
1007
R
HOH
99
7
HOH
HOH
1008
R
HOH
100
7
HOH
HOH
1009
R
HOH
110
7
HOH
HOH
1010
R
HOH
115
7
HOH
HOH
1011
R
HOH
116
7
HOH
HOH
1012
R
HOH
117
7
HOH
HOH
1013
R
HOH
118
7
HOH
HOH
1014
R
HOH
119
7
HOH
HOH
1015
R
HOH
120
7
HOH
HOH
1016
R
HOH
127
7
HOH
HOH
1017
R
HOH
135
7
HOH
HOH
1018
R
HOH
136
7
HOH
HOH
1019
R
HOH
137
7
HOH
HOH
1020
R
HOH
138
7
HOH
HOH
1021
R
HOH
139
7
HOH
HOH
1022
R
HOH
145
7
HOH
HOH
1023
R
HOH
154
7
HOH
HOH
1024
R
HOH
155
7
HOH
HOH
1025
R
HOH
156
7
HOH
HOH
1026
R
HOH
157
7
HOH
HOH
1027
R
HOH
158
7
HOH
HOH
1028
R
HOH
159
7
HOH
HOH
1029
R
HOH
160
7
HOH
HOH
1030
R
HOH
161
7
HOH
HOH
1031
R
HOH
162
7
HOH
HOH
1032
R
HOH
163
7
HOH
HOH
1033
R
HOH
174
7
HOH
HOH
1034
R
HOH
182
7
HOH
HOH
1035
R
HOH
186
7
HOH
HOH
1036
R
HOH
191
7
HOH
HOH
1037
R
HOH
196
7
HOH
HOH
1038
R
HOH
198
7
HOH
HOH
1039
R
HOH
202
7
HOH
HOH
1040
R
HOH
203
7
HOH
HOH
1041
R
HOH
208
7
HOH
HOH
1042
R
HOH
209
7
HOH
HOH
1043
R
HOH
216
7
HOH
HOH
1044
R
HOH
217
7
HOH
HOH
1045
R
HOH
221
7
HOH
HOH
1046
R
HOH
223
7
HOH
HOH
1047
R
HOH
227
7
HOH
HOH
1048
R
HOH
230
7
HOH
HOH
1049
R
HOH
235
7
HOH
HOH
1050
R
HOH
237
7
HOH
HOH
1051
R
HOH
239
7
HOH
HOH
1052
R
HOH
241
7
HOH
HOH
1053
R
HOH
246
7
HOH
HOH
1054
R
HOH
255
7
HOH
HOH
1055
R
HOH
256
7
HOH
HOH
1056
R
HOH
259
7
HOH
HOH
1057
R
HOH
264
7
HOH
HOH
1058
R
HOH
272
7
HOH
HOH
1059
R
HOH
273
7
HOH
HOH
1060
R
HOH
278
7
HOH
HOH
1061
R
HOH
280
7
HOH
HOH
1062
R
HOH
283
7
HOH
HOH
1063
R
HOH
3
7
HOH
HOH
410
P
HOH
6
7
HOH
HOH
411
P
HOH
7
7
HOH
HOH
412
P
HOH
12
7
HOH
HOH
413
P
HOH
14
7
HOH
HOH
414
P
HOH
15
7
HOH
HOH
415
P
HOH
20
7
HOH
HOH
416
P
HOH
21
7
HOH
HOH
417
P
HOH
22
7
HOH
HOH
418
P
HOH
23
7
HOH
HOH
419
P
HOH
24
7
HOH
HOH
420
P
HOH
25
7
HOH
HOH
421
P
HOH
26
7
HOH
HOH
422
P
HOH
27
7
HOH
HOH
423
P
HOH
30
7
HOH
HOH
424
P
HOH
31
7
HOH
HOH
425
P
HOH
33
7
HOH
HOH
426
P
HOH
34
7
HOH
HOH
427
P
HOH
35
7
HOH
HOH
428
P
HOH
39
7
HOH
HOH
429
P
HOH
42
7
HOH
HOH
430
P
HOH
44
7
HOH
HOH
431
P
HOH
45
7
HOH
HOH
432
P
HOH
46
7
HOH
HOH
433
P
HOH
50
7
HOH
HOH
434
P
HOH
51
7
HOH
HOH
435
P
HOH
52
7
HOH
HOH
436
P
HOH
54
7
HOH
HOH
437
P
HOH
55
7
HOH
HOH
438
P
HOH
59
7
HOH
HOH
439
P
HOH
60
7
HOH
HOH
440
P
HOH
61
7
HOH
HOH
441
P
HOH
65
7
HOH
HOH
442
P
HOH
82
7
HOH
HOH
443
P
HOH
83
7
HOH
HOH
444
P
HOH
84
7
HOH
HOH
445
P
HOH
85
7
HOH
HOH
446
P
HOH
86
7
HOH
HOH
447
P
HOH
87
7
HOH
HOH
448
P
HOH
88
7
HOH
HOH
449
P
HOH
89
7
HOH
HOH
450
P
HOH
90
7
HOH
HOH
451
P
HOH
91
7
HOH
HOH
452
P
HOH
92
7
HOH
HOH
453
P
HOH
93
7
HOH
HOH
454
P
HOH
94
7
HOH
HOH
455
P
HOH
95
7
HOH
HOH
456
P
HOH
96
7
HOH
HOH
457
P
HOH
97
7
HOH
HOH
458
P
HOH
101
7
HOH
HOH
459
P
HOH
102
7
HOH
HOH
460
P
HOH
103
7
HOH
HOH
461
P
HOH
104
7
HOH
HOH
462
P
HOH
105
7
HOH
HOH
463
P
HOH
106
7
HOH
HOH
464
P
HOH
107
7
HOH
HOH
465
P
HOH
108
7
HOH
HOH
466
P
HOH
109
7
HOH
HOH
467
P
HOH
111
7
HOH
HOH
468
P
HOH
112
7
HOH
HOH
469
P
HOH
113
7
HOH
HOH
470
P
HOH
114
7
HOH
HOH
471
P
HOH
121
7
HOH
HOH
472
P
HOH
122
7
HOH
HOH
473
P
HOH
123
7
HOH
HOH
474
P
HOH
124
7
HOH
HOH
475
P
HOH
125
7
HOH
HOH
476
P
HOH
126
7
HOH
HOH
477
P
HOH
128
7
HOH
HOH
478
P
HOH
129
7
HOH
HOH
479
P
HOH
130
7
HOH
HOH
480
P
HOH
131
7
HOH
HOH
481
P
HOH
132
7
HOH
HOH
482
P
HOH
133
7
HOH
HOH
483
P
HOH
134
7
HOH
HOH
484
P
HOH
140
7
HOH
HOH
485
P
HOH
141
7
HOH
HOH
486
P
HOH
142
7
HOH
HOH
487
P
HOH
143
7
HOH
HOH
488
P
HOH
144
7
HOH
HOH
489
P
HOH
146
7
HOH
HOH
490
P
HOH
147
7
HOH
HOH
491
P
HOH
148
7
HOH
HOH
492
P
HOH
149
7
HOH
HOH
493
P
HOH
150
7
HOH
HOH
494
P
HOH
151
7
HOH
HOH
495
P
HOH
152
7
HOH
HOH
496
P
HOH
153
7
HOH
HOH
497
P
HOH
164
7
HOH
HOH
498
P
HOH
165
7
HOH
HOH
499
P
HOH
166
7
HOH
HOH
500
P
HOH
167
7
HOH
HOH
501
P
HOH
168
7
HOH
HOH
502
P
HOH
169
7
HOH
HOH
503
P
HOH
170
7
HOH
HOH
504
P
HOH
171
7
HOH
HOH
505
P
HOH
172
7
HOH
HOH
506
P
HOH
173
7
HOH
HOH
507
P
HOH
175
7
HOH
HOH
508
P
HOH
176
7
HOH
HOH
509
P
HOH
177
7
HOH
HOH
510
P
HOH
178
7
HOH
HOH
511
P
HOH
180
7
HOH
HOH
512
P
HOH
181
7
HOH
HOH
513
P
HOH
183
7
HOH
HOH
514
P
HOH
184
7
HOH
HOH
515
P
HOH
185
7
HOH
HOH
516
P
HOH
187
7
HOH
HOH
517
P
HOH
188
7
HOH
HOH
518
P
HOH
189
7
HOH
HOH
519
P
HOH
192
7
HOH
HOH
520
P
HOH
194
7
HOH
HOH
521
P
HOH
195
7
HOH
HOH
522
P
HOH
199
7
HOH
HOH
523
P
HOH
200
7
HOH
HOH
524
P
HOH
201
7
HOH
HOH
525
P
HOH
204
7
HOH
HOH
526
P
HOH
205
7
HOH
HOH
527
P
HOH
206
7
HOH
HOH
528
P
HOH
207
7
HOH
HOH
529
P
HOH
210
7
HOH
HOH
530
P
HOH
211
7
HOH
HOH
531
P
HOH
212
7
HOH
HOH
532
P
HOH
213
7
HOH
HOH
533
P
HOH
214
7
HOH
HOH
534
P
HOH
215
7
HOH
HOH
535
P
HOH
218
7
HOH
HOH
536
P
HOH
219
7
HOH
HOH
537
P
HOH
220
7
HOH
HOH
538
P
HOH
222
7
HOH
HOH
539
P
HOH
224
7
HOH
HOH
540
P
HOH
225
7
HOH
HOH
541
P
HOH
226
7
HOH
HOH
542
P
HOH
228
7
HOH
HOH
543
P
HOH
229
7
HOH
HOH
544
P
HOH
231
7
HOH
HOH
545
P
HOH
232
7
HOH
HOH
546
P
HOH
233
7
HOH
HOH
547
P
HOH
234
7
HOH
HOH
548
P
HOH
236
7
HOH
HOH
549
P
HOH
238
7
HOH
HOH
550
P
HOH
240
7
HOH
HOH
551
P
HOH
242
7
HOH
HOH
552
P
HOH
243
7
HOH
HOH
553
P
HOH
244
7
HOH
HOH
554
P
HOH
245
7
HOH
HOH
555
P
HOH
247
7
HOH
HOH
556
P
HOH
248
7
HOH
HOH
557
P
HOH
249
7
HOH
HOH
558
P
HOH
250
7
HOH
HOH
559
P
HOH
251
7
HOH
HOH
560
P
HOH
252
7
HOH
HOH
561
P
HOH
253
7
HOH
HOH
562
P
HOH
254
7
HOH
HOH
563
P
HOH
257
7
HOH
HOH
564
P
HOH
258
7
HOH
HOH
565
P
HOH
260
7
HOH
HOH
566
P
HOH
261
7
HOH
HOH
567
P
HOH
262
7
HOH
HOH
568
P
HOH
263
7
HOH
HOH
569
P
HOH
265
7
HOH
HOH
570
P
HOH
266
7
HOH
HOH
571
P
HOH
267
7
HOH
HOH
572
P
HOH
268
7
HOH
HOH
573
P
HOH
269
7
HOH
HOH
574
P
HOH
270
7
HOH
HOH
575
P
HOH
271
7
HOH
HOH
576
P
HOH
274
7
HOH
HOH
577
P
HOH
275
7
HOH
HOH
578
P
HOH
276
7
HOH
HOH
579
P
HOH
277
7
HOH
HOH
580
P
HOH
279
7
HOH
HOH
581
P
HOH
281
7
HOH
HOH
582
P
HOH
282
7
HOH
HOH
583
P
G
1
n
1
G
1
R
G
2
n
2
G
2
R
C
3
n
3
C
3
R
G
4
n
4
G
4
R
C
5
n
5
C
5
R
G
6
n
6
G
6
R
U
7
n
7
U
7
R
4SU
8
n
8
4SU
8
R
A
9
n
9
A
9
R
A
10
n
10
A
10
R
C
11
n
11
C
11
R
A
12
n
12
A
12
R
A
13
n
13
A
13
R
A
14
n
14
A
14
R
G
15
n
15
G
15
R
C
16
n
16
C
16
R
G
18
n
17
G
18
R
G
19
n
18
G
19
R
H2U
20
n
19
H2U
20
R
H2U
21
n
20
H2U
21
R
A
22
n
21
A
22
R
U
23
n
22
U
23
R
G
24
n
23
G
24
R
U
25
n
24
U
25
R
A
26
n
25
A
26
R
G
27
n
26
G
27
R
C
28
n
27
C
28
R
G
29
n
28
G
29
R
G
30
n
29
G
30
R
A
31
n
30
A
31
R
PSU
32
n
31
PSU
32
R
U
33
n
32
U
33
R
G
34
n
33
G
34
R
C
35
n
34
C
35
R
A
36
n
35
A
36
R
MIA
37
n
36
MIA
37
R
A
38
n
37
A
38
R
PSU
39
n
38
PSU
39
R
C
40
n
39
C
40
R
C
41
n
40
C
41
R
G
42
n
41
G
42
R
U
43
n
42
U
43
R
C
44
n
43
C
44
R
U
45
n
44
U
45
R
A
46
n
45
A
46
R
G
48
n
46
G
48
R
U
49
n
47
U
49
R
C
50
n
48
C
50
R
C
51
n
49
C
51
R
G
52
n
50
G
52
R
G
53
n
51
G
53
R
5MU
54
n
52
5MU
54
R
PSU
55
n
53
PSU
55
R
C
56
n
54
C
56
R
G
57
n
55
G
57
R
A
58
n
56
A
58
R
C
59
n
57
C
59
R
U
60
n
58
U
60
R
C
61
n
59
C
61
R
C
62
n
60
C
62
R
G
63
n
61
G
63
R
G
64
n
62
G
64
R
A
65
n
63
A
65
R
A
66
n
64
A
66
R
C
67
n
65
C
67
R
G
68
n
66
G
68
R
C
69
n
67
C
69
R
G
70
n
68
G
70
R
C
71
n
69
C
71
R
C
72
n
70
C
72
R
U
73
n
71
U
73
R
C
74
n
72
C
74
R
C
75
n
73
C
75
R
A
76
n
74
A
76
R
ALA
1
n
1
ALA
1
P
LYS
2
n
2
LYS
2
P
GLY
3
n
3
GLY
3
P
GLU
4
n
4
GLU
4
P
PHE
5
n
5
PHE
5
P
ILE
6
n
6
ILE
6
P
ARG
7
n
7
ARG
7
P
THR
8
n
8
THR
8
P
LYS
9
n
9
LYS
9
P
PRO
10
n
10
PRO
10
P
HIS
11
n
11
HIS
11
P
VAL
12
n
12
VAL
12
P
ASN
13
n
13
ASN
13
P
VAL
14
n
14
VAL
14
P
GLY
15
n
15
GLY
15
P
THR
16
n
16
THR
16
P
ILE
17
n
17
ILE
17
P
GLY
18
n
18
GLY
18
P
HIS
19
n
19
HIS
19
P
VAL
20
n
20
VAL
20
P
ASP
21
n
21
ASP
21
P
HIS
22
n
22
HIS
22
P
GLY
23
n
23
GLY
23
P
LYS
24
n
24
LYS
24
P
THR
25
n
25
THR
25
P
THR
26
n
26
THR
26
P
LEU
27
n
27
LEU
27
P
THR
28
n
28
THR
28
P
ALA
29
n
29
ALA
29
P
ALA
30
n
30
ALA
30
P
LEU
31
n
31
LEU
31
P
THR
32
n
32
THR
32
P
TYR
33
n
33
TYR
33
P
VAL
34
n
34
VAL
34
P
ALA
35
n
35
ALA
35
P
ALA
36
n
36
ALA
36
P
ALA
37
n
37
ALA
37
P
GLU
38
n
38
GLU
38
P
ASN
39
n
39
ASN
39
P
PRO
40
n
40
PRO
40
P
ASN
41
n
41
ASN
41
P
VAL
42
n
42
VAL
42
P
GLU
43
n
43
GLU
43
P
VAL
44
n
44
VAL
44
P
LYS
45
n
45
LYS
45
P
ASP
46
n
46
ASP
46
P
TYR
47
n
47
TYR
47
P
GLY
48
n
48
GLY
48
P
ASP
49
n
49
ASP
49
P
ILE
50
n
50
ILE
50
P
ASP
51
n
51
ASP
51
P
LYS
52
n
52
LYS
52
P
ALA
53
n
53
ALA
53
P
PRO
54
n
54
PRO
54
P
GLU
55
n
55
GLU
55
P
GLU
56
n
56
GLU
56
P
ARG
57
n
57
ARG
57
P
ALA
58
n
58
ALA
58
P
ARG
59
n
59
ARG
59
P
GLY
60
n
60
GLY
60
P
ILE
61
n
61
ILE
61
P
THR
62
n
62
THR
62
P
ILE
63
n
63
ILE
63
P
ASN
64
n
64
ASN
64
P
THR
65
n
65
THR
65
P
ALA
66
n
66
ALA
66
P
HIS
67
n
67
HIS
67
P
VAL
68
n
68
VAL
68
P
GLU
69
n
69
GLU
69
P
TYR
70
n
70
TYR
70
P
GLU
71
n
71
GLU
71
P
THR
72
n
72
THR
72
P
ALA
73
n
73
ALA
73
P
LYS
74
n
74
LYS
74
P
ARG
75
n
75
ARG
75
P
HIS
76
n
76
HIS
76
P
TYR
77
n
77
TYR
77
P
SER
78
n
78
SER
78
P
HIS
79
n
79
HIS
79
P
VAL
80
n
80
VAL
80
P
ASP
81
n
81
ASP
81
P
CYS
82
n
82
CYS
82
P
PRO
83
n
83
PRO
83
P
GLY
84
n
84
GLY
84
P
HIS
85
n
85
HIS
85
P
ALA
86
n
86
ALA
86
P
ASP
87
n
87
ASP
87
P
TYR
88
n
88
TYR
88
P
ILE
89
n
89
ILE
89
P
LYS
90
n
90
LYS
90
P
ASN
91
n
91
ASN
91
P
MET
92
n
92
MET
92
P
ILE
93
n
93
ILE
93
P
THR
94
n
94
THR
94
P
GLY
95
n
95
GLY
95
P
ALA
96
n
96
ALA
96
P
ALA
97
n
97
ALA
97
P
GLN
98
n
98
GLN
98
P
MET
99
n
99
MET
99
P
ASP
100
n
100
ASP
100
P
GLY
101
n
101
GLY
101
P
ALA
102
n
102
ALA
102
P
ILE
103
n
103
ILE
103
P
LEU
104
n
104
LEU
104
P
VAL
105
n
105
VAL
105
P
VAL
106
n
106
VAL
106
P
SER
107
n
107
SER
107
P
ALA
108
n
108
ALA
108
P
ALA
109
n
109
ALA
109
P
ASP
110
n
110
ASP
110
P
GLY
111
n
111
GLY
111
P
PRO
112
n
112
PRO
112
P
MET
113
n
113
MET
113
P
PRO
114
n
114
PRO
114
P
GLN
115
n
115
GLN
115
P
THR
116
n
116
THR
116
P
ARG
117
n
117
ARG
117
P
GLU
118
n
118
GLU
118
P
HIS
119
n
119
HIS
119
P
ILE
120
n
120
ILE
120
P
LEU
121
n
121
LEU
121
P
LEU
122
n
122
LEU
122
P
ALA
123
n
123
ALA
123
P
ARG
124
n
124
ARG
124
P
GLN
125
n
125
GLN
125
P
VAL
126
n
126
VAL
126
P
GLY
127
n
127
GLY
127
P
VAL
128
n
128
VAL
128
P
PRO
129
n
129
PRO
129
P
TYR
130
n
130
TYR
130
P
ILE
131
n
131
ILE
131
P
VAL
132
n
132
VAL
132
P
VAL
133
n
133
VAL
133
P
PHE
134
n
134
PHE
134
P
MET
135
n
135
MET
135
P
ASN
136
n
136
ASN
136
P
LYS
137
n
137
LYS
137
P
VAL
138
n
138
VAL
138
P
ASP
139
n
139
ASP
139
P
MET
140
n
140
MET
140
P
VAL
141
n
141
VAL
141
P
ASP
142
n
142
ASP
142
P
ASP
143
n
143
ASP
143
P
PRO
144
n
144
PRO
144
P
GLU
145
n
145
GLU
145
P
LEU
146
n
146
LEU
146
P
LEU
147
n
147
LEU
147
P
ASP
148
n
148
ASP
148
P
LEU
149
n
149
LEU
149
P
VAL
150
n
150
VAL
150
P
GLU
151
n
151
GLU
151
P
MET
152
n
152
MET
152
P
GLU
153
n
153
GLU
153
P
VAL
154
n
154
VAL
154
P
ARG
155
n
155
ARG
155
P
ASP
156
n
156
ASP
156
P
LEU
157
n
157
LEU
157
P
LEU
158
n
158
LEU
158
P
ASN
159
n
159
ASN
159
P
GLN
160
n
160
GLN
160
P
TYR
161
n
161
TYR
161
P
GLU
162
n
162
GLU
162
P
PHE
163
n
163
PHE
163
P
PRO
164
n
164
PRO
164
P
GLY
165
n
165
GLY
165
P
ASP
166
n
166
ASP
166
P
GLU
167
n
167
GLU
167
P
VAL
168
n
168
VAL
168
P
PRO
169
n
169
PRO
169
P
VAL
170
n
170
VAL
170
P
ILE
171
n
171
ILE
171
P
ARG
172
n
172
ARG
172
P
GLY
173
n
173
GLY
173
P
SER
174
n
174
SER
174
P
ALA
175
n
175
ALA
175
P
LEU
176
n
176
LEU
176
P
LEU
177
n
177
LEU
177
P
ALA
178
n
178
ALA
178
P
LEU
179
n
179
LEU
179
P
GLU
180
n
180
GLU
180
P
GLU
181
n
181
GLU
181
P
MET
182
n
182
MET
182
P
HIS
183
n
183
HIS
183
P
LYS
184
n
184
LYS
184
P
ASN
185
n
185
ASN
185
P
PRO
186
n
186
PRO
186
P
LYS
187
n
187
LYS
187
P
THR
188
n
188
THR
188
P
LYS
189
n
189
LYS
189
P
ARG
190
n
190
ARG
190
P
GLY
191
n
191
GLY
191
P
GLU
192
n
192
GLU
192
P
ASN
193
n
193
ASN
193
P
GLU
194
n
194
GLU
194
P
TRP
195
n
195
TRP
195
P
VAL
196
n
196
VAL
196
P
ASP
197
n
197
ASP
197
P
LYS
198
n
198
LYS
198
P
ILE
199
n
199
ILE
199
P
TRP
200
n
200
TRP
200
P
GLU
201
n
201
GLU
201
P
LEU
202
n
202
LEU
202
P
LEU
203
n
203
LEU
203
P
ASP
204
n
204
ASP
204
P
ALA
205
n
205
ALA
205
P
ILE
206
n
206
ILE
206
P
ASP
207
n
207
ASP
207
P
GLU
208
n
208
GLU
208
P
TYR
209
n
209
TYR
209
P
ILE
210
n
210
ILE
210
P
PRO
211
n
211
PRO
211
P
THR
212
n
212
THR
212
P
PRO
213
n
213
PRO
213
P
VAL
214
n
214
VAL
214
P
ARG
215
n
215
ARG
215
P
ASP
216
n
216
ASP
216
P
VAL
217
n
217
VAL
217
P
ASP
218
n
218
ASP
218
P
LYS
219
n
219
LYS
219
P
PRO
220
n
220
PRO
220
P
PHE
221
n
221
PHE
221
P
LEU
222
n
222
LEU
222
P
MET
223
n
223
MET
223
P
PRO
224
n
224
PRO
224
P
VAL
225
n
225
VAL
225
P
GLU
226
n
226
GLU
226
P
ASP
227
n
227
ASP
227
P
VAL
228
n
228
VAL
228
P
PHE
229
n
229
PHE
229
P
THR
230
n
230
THR
230
P
ILE
231
n
231
ILE
231
P
THR
232
n
232
THR
232
P
GLY
233
n
233
GLY
233
P
ARG
234
n
234
ARG
234
P
GLY
235
n
235
GLY
235
P
THR
236
n
236
THR
236
P
VAL
237
n
237
VAL
237
P
ALA
238
n
238
ALA
238
P
THR
239
n
239
THR
239
P
GLY
240
n
240
GLY
240
P
ARG
241
n
241
ARG
241
P
ILE
242
n
242
ILE
242
P
GLU
243
n
243
GLU
243
P
ARG
244
n
244
ARG
244
P
GLY
245
n
245
GLY
245
P
LYS
246
n
246
LYS
246
P
VAL
247
n
247
VAL
247
P
LYS
248
n
248
LYS
248
P
VAL
249
n
249
VAL
249
P
GLY
250
n
250
GLY
250
P
ASP
251
n
251
ASP
251
P
GLU
252
n
252
GLU
252
P
VAL
253
n
253
VAL
253
P
GLU
254
n
254
GLU
254
P
ILE
255
n
255
ILE
255
P
VAL
256
n
256
VAL
256
P
GLY
257
n
257
GLY
257
P
LEU
258
n
258
LEU
258
P
ALA
259
n
259
ALA
259
P
PRO
260
n
260
PRO
260
P
GLU
261
n
261
GLU
261
P
THR
262
n
262
THR
262
P
ARG
263
n
263
ARG
263
P
LYS
264
n
264
LYS
264
P
THR
265
n
265
THR
265
P
VAL
266
n
266
VAL
266
P
VAL
267
n
267
VAL
267
P
THR
268
n
268
THR
268
P
GLY
269
n
269
GLY
269
P
VAL
270
n
270
VAL
270
P
GLU
271
n
271
GLU
271
P
MET
272
n
272
MET
272
P
HIS
273
n
273
HIS
273
P
ARG
274
n
274
ARG
274
P
LYS
275
n
275
LYS
275
P
THR
276
n
276
THR
276
P
LEU
277
n
277
LEU
277
P
GLN
278
n
278
GLN
278
P
GLU
279
n
279
GLU
279
P
GLY
280
n
280
GLY
280
P
ILE
281
n
281
ILE
281
P
ALA
282
n
282
ALA
282
P
GLY
283
n
283
GLY
283
P
ASP
284
n
284
ASP
284
P
ASN
285
n
285
ASN
285
P
VAL
286
n
286
VAL
286
P
GLY
287
n
287
GLY
287
P
LEU
288
n
288
LEU
288
P
LEU
289
n
289
LEU
289
P
LEU
290
n
290
LEU
290
P
ARG
291
n
291
ARG
291
P
GLY
292
n
292
GLY
292
P
VAL
293
n
293
VAL
293
P
SER
294
n
294
SER
294
P
ARG
295
n
295
ARG
295
P
GLU
296
n
296
GLU
296
P
GLU
297
n
297
GLU
297
P
VAL
298
n
298
VAL
298
P
GLU
299
n
299
GLU
299
P
ARG
300
n
300
ARG
300
P
GLY
301
n
301
GLY
301
P
GLN
302
n
302
GLN
302
P
VAL
303
n
303
VAL
303
P
LEU
304
n
304
LEU
304
P
ALA
305
n
305
ALA
305
P
LYS
306
n
306
LYS
306
P
PRO
307
n
307
PRO
307
P
GLY
308
n
308
GLY
308
P
SER
309
n
309
SER
309
P
ILE
310
n
310
ILE
310
P
THR
311
n
311
THR
311
P
PRO
312
n
312
PRO
312
P
HIS
313
n
313
HIS
313
P
THR
314
n
314
THR
314
P
LYS
315
n
315
LYS
315
P
PHE
316
n
316
PHE
316
P
GLU
317
n
317
GLU
317
P
ALA
318
n
318
ALA
318
P
SER
319
n
319
SER
319
P
VAL
320
n
320
VAL
320
P
TYR
321
n
321
TYR
321
P
ILE
322
n
322
ILE
322
P
LEU
323
n
323
LEU
323
P
LYS
324
n
324
LYS
324
P
LYS
325
n
325
LYS
325
P
GLU
326
n
326
GLU
326
P
GLU
327
n
327
GLU
327
P
GLY
328
n
328
GLY
328
P
GLY
329
n
329
GLY
329
P
ARG
330
n
330
ARG
330
P
HIS
331
n
331
HIS
331
P
THR
332
n
332
THR
332
P
GLY
333
n
333
GLY
333
P
PHE
334
n
334
PHE
334
P
PHE
335
n
335
PHE
335
P
THR
336
n
336
THR
336
P
GLY
337
n
337
GLY
337
P
TYR
338
n
338
TYR
338
P
ARG
339
n
339
ARG
339
P
PRO
340
n
340
PRO
340
P
GLN
341
n
341
GLN
341
P
PHE
342
n
342
PHE
342
P
TYR
343
n
343
TYR
343
P
PHE
344
n
344
PHE
344
P
ARG
345
n
345
ARG
345
P
THR
346
n
346
THR
346
P
THR
347
n
347
THR
347
P
ASP
348
n
348
ASP
348
P
VAL
349
n
349
VAL
349
P
THR
350
n
350
THR
350
P
GLY
351
n
351
GLY
351
P
VAL
352
n
352
VAL
352
P
VAL
353
n
353
VAL
353
P
ARG
354
n
354
ARG
354
P
LEU
355
n
355
LEU
355
P
PRO
356
n
356
PRO
356
P
GLN
357
n
357
GLN
357
P
GLY
358
n
358
GLY
358
P
VAL
359
n
359
VAL
359
P
GLU
360
n
360
GLU
360
P
MET
361
n
361
MET
361
P
VAL
362
n
362
VAL
362
P
MET
363
n
363
MET
363
P
PRO
364
n
364
PRO
364
P
GLY
365
n
365
GLY
365
P
ASP
366
n
366
ASP
366
P
ASN
367
n
367
ASN
367
P
VAL
368
n
368
VAL
368
P
THR
369
n
369
THR
369
P
PHE
370
n
370
PHE
370
P
THR
371
n
371
THR
371
P
VAL
372
n
372
VAL
372
P
GLU
373
n
373
GLU
373
P
LEU
374
n
374
LEU
374
P
ILE
375
n
375
ILE
375
P
LYS
376
n
376
LYS
376
P
PRO
377
n
377
PRO
377
P
VAL
378
n
378
VAL
378
P
ALA
379
n
379
ALA
379
P
LEU
380
n
380
LEU
380
P
GLU
381
n
381
GLU
381
P
GLU
382
n
382
GLU
382
P
GLY
383
n
383
GLY
383
P
LEU
384
n
384
LEU
384
P
ARG
385
n
385
ARG
385
P
PHE
386
n
386
PHE
386
P
ALA
387
n
387
ALA
387
P
ILE
388
n
388
ILE
388
P
ARG
389
n
389
ARG
389
P
GLU
390
n
390
GLU
390
P
GLY
391
n
391
GLY
391
P
GLY
392
n
392
GLY
392
P
ARG
393
n
393
ARG
393
P
THR
394
n
394
THR
394
P
VAL
395
n
395
VAL
395
P
GLY
396
n
396
GLY
396
P
ALA
397
n
397
ALA
397
P
GLY
398
n
398
GLY
398
P
VAL
399
n
399
VAL
399
P
VAL
400
n
400
VAL
400
P
THR
401
n
401
THR
401
P
LYS
402
n
402
LYS
402
P
ILE
403
n
403
ILE
403
P
LEU
404
n
404
LEU
404
P
GLU
405
n
405
GLU
405
P
author_defined_assembly
2
dimeric
R
A
76
A
O5'
A
74
1_555
R
MG
77
C
MG
MG
1_555
R
A
76
A
OP2
A
74
1_555
52.5
P
THR
25
B
OG1
THR
25
1_555
P
MG
407
F
MG
MG
1_555
P
THR
62
B
OG1
THR
62
1_555
80.9
P
THR
25
B
OG1
THR
25
1_555
P
MG
407
F
MG
MG
1_555
P
GNP
406
I
O2B
GNP
1_555
80.4
P
THR
62
B
OG1
THR
62
1_555
P
MG
407
F
MG
MG
1_555
P
GNP
406
I
O2B
GNP
1_555
145.4
P
THR
25
B
OG1
THR
25
1_555
P
MG
407
F
MG
MG
1_555
P
GNP
406
I
N3B
GNP
1_555
120.1
P
THR
62
B
OG1
THR
62
1_555
P
MG
407
F
MG
MG
1_555
P
GNP
406
I
N3B
GNP
1_555
116.2
P
GNP
406
I
O2B
GNP
1_555
P
MG
407
F
MG
MG
1_555
P
GNP
406
I
N3B
GNP
1_555
52.5
P
THR
25
B
OG1
THR
25
1_555
P
MG
407
F
MG
MG
1_555
P
GNP
406
I
O3G
GNP
1_555
162.3
P
THR
62
B
OG1
THR
62
1_555
P
MG
407
F
MG
MG
1_555
P
GNP
406
I
O3G
GNP
1_555
88.0
P
GNP
406
I
O2B
GNP
1_555
P
MG
407
F
MG
MG
1_555
P
GNP
406
I
O3G
GNP
1_555
101.9
P
GNP
406
I
N3B
GNP
1_555
P
MG
407
F
MG
MG
1_555
P
GNP
406
I
O3G
GNP
1_555
53.4
P
THR
25
B
OG1
THR
25
1_555
P
MG
407
F
MG
MG
1_555
P
HOH
410
K
O
HOH
1_555
88.2
P
THR
62
B
OG1
THR
62
1_555
P
MG
407
F
MG
MG
1_555
P
HOH
410
K
O
HOH
1_555
109.4
P
GNP
406
I
O2B
GNP
1_555
P
MG
407
F
MG
MG
1_555
P
HOH
410
K
O
HOH
1_555
98.8
P
GNP
406
I
N3B
GNP
1_555
P
MG
407
F
MG
MG
1_555
P
HOH
410
K
O
HOH
1_555
128.7
P
GNP
406
I
O3G
GNP
1_555
P
MG
407
F
MG
MG
1_555
P
HOH
410
K
O
HOH
1_555
108.6
P
THR
25
B
OG1
THR
25
1_555
P
MG
407
F
MG
MG
1_555
P
HOH
419
K
O
HOH
1_555
74.6
P
THR
62
B
OG1
THR
62
1_555
P
MG
407
F
MG
MG
1_555
P
HOH
419
K
O
HOH
1_555
69.3
P
GNP
406
I
O2B
GNP
1_555
P
MG
407
F
MG
MG
1_555
P
HOH
419
K
O
HOH
1_555
77.8
P
GNP
406
I
N3B
GNP
1_555
P
MG
407
F
MG
MG
1_555
P
HOH
419
K
O
HOH
1_555
62.4
P
GNP
406
I
O3G
GNP
1_555
P
MG
407
F
MG
MG
1_555
P
HOH
419
K
O
HOH
1_555
88.6
P
HOH
410
K
O
HOH
1_555
P
MG
407
F
MG
MG
1_555
P
HOH
419
K
O
HOH
1_555
162.8
R
4SU
8
4-THIOURIDINE-5'-MONOPHOSPHATE
A
4SU
8
U
R
H2U
20
5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
A
H2U
19
U
R
H2U
21
5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
A
H2U
20
U
R
PSU
32
PSEUDOURIDINE-5'-MONOPHOSPHATE
A
PSU
31
U
R
MIA
37
A
MIA
36
A
R
PSU
39
PSEUDOURIDINE-5'-MONOPHOSPHATE
A
PSU
38
U
R
5MU
54
5-METHYLURIDINE 5'-MONOPHOSPHATE
A
5MU
52
U
R
PSU
55
PSEUDOURIDINE-5'-MONOPHOSPHATE
A
PSU
53
U
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
P
O
ILE
171
B
O
ILE
171
P
N
VAL
133
B
N
VAL
133
P
O
TYR
130
B
O
TYR
130
P
N
ALA
102
B
N
ALA
102
P
O
GLY
101
B
O
GLY
101
P
N
GLY
15
B
N
GLY
15
P
O
PRO
10
B
O
PRO
10
P
N
HIS
76
B
N
HIS
76
P
O
TYR
77
B
O
TYR
77
P
N
TYR
70
B
N
TYR
70
P
O
MET
223
B
O
MET
223
P
N
LEU
304
B
N
LEU
304
P
O
VAL
303
B
O
VAL
303
P
N
VAL
256
B
N
VAL
256
P
O
VAL
253
B
O
VAL
253
P
N
THR
265
B
N
THR
265
P
O
ASP
227
B
O
ASP
227
P
N
THR
239
B
N
THR
239
P
O
THR
236
B
O
THR
236
P
N
LEU
290
B
N
LEU
290
P
O
LEU
289
B
O
LEU
289
P
N
GLY
269
B
N
GLY
269
P
O
VAL
247
B
O
VAL
247
P
N
GLY
280
B
N
GLY
280
P
O
VAL
352
B
O
VAL
352
P
N
GLU
373
B
N
GLU
373
P
O
VAL
368
B
O
VAL
368
P
N
VAL
320
B
N
VAL
320
P
O
GLU
317
B
O
GLU
317
P
N
LYS
402
B
N
LYS
402
P
O
ARG
393
B
O
ARG
393
P
N
GLU
390
B
N
GLU
390
P
O
ALA
387
B
O
ALA
387
P
N
TYR
343
B
N
TYR
343
P
O
PHE
342
B
O
PHE
342
P
N
VAL
349
B
N
VAL
349
1
R
MG
179
D
MG
1
R
C12
MIA
37
A
C12
MIA
36
0
Y
1
R
C13
MIA
37
A
C13
MIA
36
0
Y
1
R
C14
MIA
37
A
C14
MIA
36
0
Y
1
R
C15
MIA
37
A
C15
MIA
36
0
Y
1
R
C16
MIA
37
A
C16
MIA
36
0
Y
1
R
R
N4
O4
C
U
72
73
1.57
1
R
P
N4
OG1
C
THR
75
232
1.70
1
R
R
N4
C4
C
U
72
73
1.77
1
P
P
ALA
LYS
1
2
96.61
1
R
C
72
0.056
SIDE CHAIN
1
P
P
C
N
ALA
LYS
1
2
1.16
1
23.42
1.30
114.00
137.42
R
R
R
N1
C1'
C2'
U
U
U
7
7
7
N
1
-22.85
1.40
121.20
98.35
R
R
R
C6
N1
C1'
U
U
U
7
7
7
N
1
22.33
1.20
117.70
140.03
R
R
R
C2
N1
C1'
U
U
U
7
7
7
N
1
2.73
0.40
105.80
108.53
R
R
R
C8
N9
C4
A
A
A
22
22
22
N
1
-7.27
1.10
112.00
104.73
R
R
R
N1
C1'
C2'
C
C
C
72
72
72
N
1
-43.90
0.80
109.40
65.50
R
R
R
O5'
C5'
C4'
C
C
C
75
75
75
N
1
-31.55
1.60
120.90
89.35
R
R
R
P
O5'
C5'
C
C
C
75
75
75
N
1
38.13
2.00
113.00
151.13
R
R
R
C4'
C3'
O3'
C
C
C
75
75
75
N
1
-22.60
2.20
109.50
86.90
R
R
R
C2'
C3'
O3'
C
C
C
75
75
75
N
1
19.68
0.70
108.50
128.18
R
R
R
O4'
C1'
N1
C
C
C
75
75
75
N
1
7.08
1.10
118.80
125.88
R
R
R
C2
N1
C1'
C
C
C
75
75
75
N
1
11.72
1.20
119.70
131.42
R
R
R
C3'
O3'
P
C
C
A
75
75
76
Y
1
38.91
2.50
121.70
160.61
P
P
P
C
N
CA
ALA
LYS
LYS
1
2
2
Y
1
R
R
P
OP3
G
G
1
1
-0.085
0.012
1.607
1.522
N
1
R
R
C1'
N1
U
U
7
7
-0.238
0.014
1.464
1.226
N
1
R
R
N9
C4
A
A
22
22
-0.065
0.006
1.374
1.309
N
1
R
R
C1'
N1
C
C
72
72
0.200
0.015
1.483
1.683
N
1
R
R
O5'
C5'
C
C
75
75
0.256
0.016
1.440
1.696
N
1
R
R
C1'
N1
C
C
75
75
0.360
0.015
1.483
1.843
N
1
P
P
C
N
ALA
LYS
1
2
-0.173
0.023
1.336
1.163
Y
1
P
LYS
2
140.11
-60.00
1
P
ILE
50
-83.03
-70.99
1
P
THR
72
-100.06
-162.35
1
P
ASP
216
-85.86
45.80
1
P
LEU
222
-165.12
119.43
1
P
ALA
259
177.35
141.93
1
P
HIS
273
55.87
70.06
1
P
ARG
274
56.37
10.92
1
P
GLN
302
-75.44
-168.56
1
P
THR
314
-131.24
-41.37
1
P
PHE
316
177.67
150.09
1
P
ARG
339
-117.40
78.11
1
P
ARG
345
54.24
-117.68
1
P
ALA
379
-54.51
109.84
PARHCSDX.PRO
TOPHCSDX.PRO
TRNA-MULTI-ENDO.PARAM
TRNA-MULTI-ENDO.TOP
GTP.PARAM
GTP.TOP
56.9
-31.5
0
0
-4.0
0
14.9
ANISOTROPIC SCALING WAS CRUCIAL FOR REFINEMENT. ANISOTROPIC SCALEFACTORS DERIVED FROM 4.0 - 2.6 A AMPLITUDES
THE ISOPENTENYL GROUP OF MIA R 37 AND THE N-TERMINAL ALA P
1 RESIDUE WERE STEREOCHEMICALLY MODELED
0.263
0.206
0.206
2.6
10.0
1424
18043
18043
6.0
89
RANDOM
1000000
0.001
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB ENTRY 1TTT
0.450
0.35
5.0
0.556
0.46
2.6
10.0
261
5046
51
1590
3144
0.007
0.88
5.41
1.5
2.0
2.5
3.0
2.5
4.0
5.3
5.0
0.398
0.362
2.72
107
1314
8
4.9
57.9
33.6
2.6
40.0
1B23
18435
-3.0
0.049
1
11.8
3.6
89
2.6
2.7
2.4
0.396
3.0
56
phasing
AMoRE
refinement
X-PLOR
3.851
data reduction
DENZO
data scaling
SCALEPACK
E. coli cysteinyl-tRNA and T. aquaticus elongation factor EF-TU:GTP ternary complex
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
3
N
N
5
N
N
5
N
N
6
N
N
7
N
N
7
N
N
P
LYS
24
B
LYS
24
HELX_P
P
GLU
38
B
GLU
38
1
1
15
P
TYR
47
B
TYR
47
HELX_P
P
ILE
50
B
ILE
50
1
2
4
P
PRO
54
B
PRO
54
HELX_P
P
ARG
59
B
ARG
59
1
3
6
P
ALA
86
B
ALA
86
HELX_P
P
GLN
98
B
GLN
98
5
4
13
P
PRO
114
B
PRO
114
HELX_P
P
VAL
126
B
VAL
126
1
5
13
P
VAL
138
B
VAL
138
HELX_P
P
MET
140
B
MET
140
5
6
3
P
PRO
144
B
PRO
144
HELX_P
P
TYR
161
B
TYR
161
1
7
18
P
ALA
175
B
ALA
175
HELX_P
P
LYS
184
B
LYS
184
1
8
10
P
GLU
194
B
GLU
194
HELX_P
P
TYR
209
B
TYR
209
1
9
16
P
LYS
325
B
LYS
325
HELX_P
P
GLU
327
B
GLU
327
5
10
3
covale
1.607
both
R
U
7
A
O3'
U
7
1_555
R
4SU
8
A
P
4SU
8
1_555
covale
1.608
both
R
4SU
8
A
O3'
4SU
8
1_555
R
A
9
A
P
A
9
1_555
covale
1.600
both
R
G
19
A
O3'
G
18
1_555
R
H2U
20
A
P
H2U
19
1_555
covale
1.605
both
R
H2U
20
A
O3'
H2U
19
1_555
R
H2U
21
A
P
H2U
20
1_555
covale
1.604
both
R
H2U
21
A
O3'
H2U
20
1_555
R
A
22
A
P
A
21
1_555
covale
1.604
both
R
A
31
A
O3'
A
30
1_555
R
PSU
32
A
P
PSU
31
1_555
covale
1.611
both
R
PSU
32
A
O3'
PSU
31
1_555
R
U
33
A
P
U
32
1_555
covale
1.613
both
R
A
36
A
O3'
A
35
1_555
R
MIA
37
A
P
MIA
36
1_555
covale
1.613
both
R
MIA
37
A
O3'
MIA
36
1_555
R
A
38
A
P
A
37
1_555
covale
1.615
both
R
A
38
A
O3'
A
37
1_555
R
PSU
39
A
P
PSU
38
1_555
covale
1.606
both
R
PSU
39
A
O3'
PSU
38
1_555
R
C
40
A
P
C
39
1_555
covale
1.603
both
R
G
53
A
O3'
G
51
1_555
R
5MU
54
A
P
5MU
52
1_555
covale
1.607
both
R
5MU
54
A
O3'
5MU
52
1_555
R
PSU
55
A
P
PSU
53
1_555
covale
1.608
both
R
PSU
55
A
O3'
PSU
53
1_555
R
C
56
A
P
C
54
1_555
covale
1.312
both
R
A
76
A
O3'
A
74
1_555
R
CYS
976
E
C
CYS
1_555
metalc
3.081
R
A
76
A
O5'
A
74
1_555
R
MG
77
C
MG
MG
1_555
metalc
1.625
R
A
76
A
OP2
A
74
1_555
R
MG
77
C
MG
MG
1_555
metalc
2.125
P
THR
25
B
OG1
THR
25
1_555
P
MG
407
F
MG
MG
1_555
metalc
2.251
P
THR
62
B
OG1
THR
62
1_555
P
MG
407
F
MG
MG
1_555
metalc
1.956
P
GNP
406
I
O2B
GNP
1_555
P
MG
407
F
MG
MG
1_555
metalc
3.149
P
GNP
406
I
N3B
GNP
1_555
P
MG
407
F
MG
MG
1_555
metalc
2.081
P
GNP
406
I
O3G
GNP
1_555
P
MG
407
F
MG
MG
1_555
metalc
1.940
P
MG
407
F
MG
MG
1_555
P
HOH
410
K
O
HOH
1_555
metalc
2.598
P
MG
407
F
MG
MG
1_555
P
HOH
419
K
O
HOH
1_555
hydrog
WATSON-CRICK
R
G
1
A
N1
G
1
1_555
R
C
72
A
N3
C
70
1_555
hydrog
WATSON-CRICK
R
G
1
A
N2
G
1
1_555
R
C
72
A
O2
C
70
1_555
hydrog
WATSON-CRICK
R
G
1
A
O6
G
1
1_555
R
C
72
A
N4
C
70
1_555
hydrog
WATSON-CRICK
R
G
2
A
N1
G
2
1_555
R
C
71
A
N3
C
69
1_555
hydrog
WATSON-CRICK
R
G
2
A
N2
G
2
1_555
R
C
71
A
O2
C
69
1_555
hydrog
WATSON-CRICK
R
G
2
A
O6
G
2
1_555
R
C
71
A
N4
C
69
1_555
hydrog
WATSON-CRICK
R
C
3
A
N3
C
3
1_555
R
G
70
A
N1
G
68
1_555
hydrog
WATSON-CRICK
R
C
3
A
N4
C
3
1_555
R
G
70
A
O6
G
68
1_555
hydrog
WATSON-CRICK
R
C
3
A
O2
C
3
1_555
R
G
70
A
N2
G
68
1_555
hydrog
WATSON-CRICK
R
G
4
A
N1
G
4
1_555
R
C
69
A
N3
C
67
1_555
hydrog
WATSON-CRICK
R
G
4
A
N2
G
4
1_555
R
C
69
A
O2
C
67
1_555
hydrog
WATSON-CRICK
R
G
4
A
O6
G
4
1_555
R
C
69
A
N4
C
67
1_555
hydrog
C-G PAIR
R
C
5
A
O2
C
5
1_555
R
G
68
A
N1
G
66
1_555
hydrog
WATSON-CRICK
R
G
6
A
N1
G
6
1_555
R
C
67
A
N3
C
65
1_555
hydrog
WATSON-CRICK
R
G
6
A
N2
G
6
1_555
R
C
67
A
O2
C
65
1_555
hydrog
WATSON-CRICK
R
G
6
A
O6
G
6
1_555
R
C
67
A
N4
C
65
1_555
hydrog
WATSON-CRICK
R
U
7
A
N3
U
7
1_555
R
A
66
A
N1
A
64
1_555
hydrog
WATSON-CRICK
R
U
7
A
O4
U
7
1_555
R
A
66
A
N6
A
64
1_555
hydrog
REVERSED HOOGSTEEN
R
4SU
8
A
N3
4SU
8
1_555
R
A
14
A
N7
A
14
1_555
hydrog
REVERSED HOOGSTEEN
R
4SU
8
A
O2
4SU
8
1_555
R
A
14
A
N6
A
14
1_555
hydrog
TYPE_5_PAIR
R
A
9
A
N6
A
9
1_555
R
A
13
A
N1
A
13
1_555
hydrog
TYPE_5_PAIR
R
A
9
A
N7
A
9
1_555
R
A
13
A
N6
A
13
1_555
hydrog
A-U PAIR
R
A
9
A
N6
A
9
1_555
R
U
23
A
O4
U
22
1_555
hydrog
A-G MISPAIR
R
A
10
A
N6
A
10
1_555
R
G
24
A
O6
G
23
1_555
hydrog
A-U PAIR
R
A
10
A
N1
A
10
1_555
R
U
25
A
N3
U
24
1_555
hydrog
WATSON-CRICK
R
C
11
A
N3
C
11
1_555
R
G
24
A
N1
G
23
1_555
hydrog
WATSON-CRICK
R
C
11
A
N4
C
11
1_555
R
G
24
A
O6
G
23
1_555
hydrog
WATSON-CRICK
R
C
11
A
O2
C
11
1_555
R
G
24
A
N2
G
23
1_555
hydrog
A-U PAIR
R
A
12
A
N1
A
12
1_555
R
U
23
A
N3
U
22
1_555
hydrog
A-A MISPAIR
R
A
13
A
N3
A
13
1_555
R
A
22
A
N6
A
21
1_555
hydrog
A-A MISPAIR
R
A
14
A
N6
A
14
1_555
R
A
46
A
N1
A
45
1_555
hydrog
G-G MISPAIR
R
G
15
A
O6
G
15
1_555
R
G
48
A
N1
G
46
1_555
hydrog
TYPE_15_PAIR
R
C
16
A
N4
C
16
1_555
R
C
59
A
O2
C
57
1_555
hydrog
TYPE_15_PAIR
R
C
16
A
O2
C
16
1_555
R
C
59
A
N4
C
57
1_555
hydrog
G-PSU MISPAIR
R
G
18
A
N1
G
17
1_555
R
PSU
55
A
O4
PSU
53
1_555
hydrog
WATSON-CRICK
R
G
19
A
N1
G
18
1_555
R
C
56
A
N3
C
54
1_555
hydrog
WATSON-CRICK
R
G
19
A
N2
G
18
1_555
R
C
56
A
O2
C
54
1_555
hydrog
WATSON-CRICK
R
G
19
A
O6
G
18
1_555
R
C
56
A
N4
C
54
1_555
hydrog
A-C MISPAIR
R
A
26
A
N6
A
25
1_555
R
C
44
A
N3
C
43
1_555
hydrog
TYPE_28_PAIR
R
G
27
A
N1
G
26
1_555
R
U
43
A
O2
U
42
1_555
hydrog
TYPE_28_PAIR
R
G
27
A
O6
G
26
1_555
R
U
43
A
N3
U
42
1_555
hydrog
WATSON-CRICK
R
C
28
A
N3
C
27
1_555
R
G
42
A
N1
G
41
1_555
hydrog
WATSON-CRICK
R
C
28
A
N4
C
27
1_555
R
G
42
A
O6
G
41
1_555
hydrog
WATSON-CRICK
R
C
28
A
O2
C
27
1_555
R
G
42
A
N2
G
41
1_555
hydrog
G-C PAIR
R
G
29
A
N1
G
28
1_555
R
C
41
A
N3
C
40
1_555
hydrog
G-C PAIR
R
G
30
A
N2
G
29
1_555
R
C
40
A
O2
C
39
1_555
hydrog
WATSON-CRICK
R
U
49
A
N3
U
47
1_555
R
A
65
A
N1
A
63
1_555
hydrog
WATSON-CRICK
R
U
49
A
O4
U
47
1_555
R
A
65
A
N6
A
63
1_555
hydrog
WATSON-CRICK
R
C
50
A
N3
C
48
1_555
R
G
64
A
N1
G
62
1_555
hydrog
WATSON-CRICK
R
C
50
A
N4
C
48
1_555
R
G
64
A
O6
G
62
1_555
hydrog
WATSON-CRICK
R
C
50
A
O2
C
48
1_555
R
G
64
A
N2
G
62
1_555
hydrog
WATSON-CRICK
R
C
51
A
N3
C
49
1_555
R
G
63
A
N1
G
61
1_555
hydrog
WATSON-CRICK
R
C
51
A
N4
C
49
1_555
R
G
63
A
O6
G
61
1_555
hydrog
WATSON-CRICK
R
C
51
A
O2
C
49
1_555
R
G
63
A
N2
G
61
1_555
hydrog
WATSON-CRICK
R
G
52
A
N1
G
50
1_555
R
C
62
A
N3
C
60
1_555
hydrog
WATSON-CRICK
R
G
52
A
N2
G
50
1_555
R
C
62
A
O2
C
60
1_555
hydrog
WATSON-CRICK
R
G
52
A
O6
G
50
1_555
R
C
62
A
N4
C
60
1_555
hydrog
WATSON-CRICK
R
G
53
A
N1
G
51
1_555
R
C
61
A
N3
C
59
1_555
hydrog
WATSON-CRICK
R
G
53
A
N2
G
51
1_555
R
C
61
A
O2
C
59
1_555
hydrog
WATSON-CRICK
R
G
53
A
O6
G
51
1_555
R
C
61
A
N4
C
59
1_555
hydrog
REVERSED HOOGSTEEN
R
5MU
54
A
N3
5MU
52
1_555
R
A
58
A
N7
A
56
1_555
hydrog
REVERSED HOOGSTEEN
R
5MU
54
A
O2
5MU
52
1_555
R
A
58
A
N6
A
56
1_555
GENE REGULATION/RNA
TRANSLATION ELONGATION FACTOR, TRANSFER RNA, PROTEIN SYNTHESIS, GENE REGULATION-RNA COMPLEX
EFTU_THEAQ
UNP
2
1
Q01698
1B23
PDB
1
1B23
1
405
1B23
1
405
Q01698
P
1
1
405
1
76
1B23
1
76
1B23
R
2
1
74
6
4
4
2
7
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
P
VAL
170
B
VAL
170
P
ARG
172
B
ARG
172
P
TYR
130
B
TYR
130
P
ASN
136
B
ASN
136
P
GLY
101
B
GLY
101
P
SER
107
B
SER
107
P
PRO
10
B
PRO
10
P
ILE
17
B
ILE
17
P
ARG
75
B
ARG
75
P
ASP
81
B
ASP
81
P
ALA
66
B
ALA
66
P
GLU
71
B
GLU
71
P
LEU
222
B
LEU
222
P
PRO
224
B
PRO
224
P
VAL
303
B
VAL
303
P
LYS
306
B
LYS
306
P
GLU
252
B
GLU
252
P
VAL
256
B
VAL
256
P
LYS
264
B
LYS
264
P
VAL
266
B
VAL
266
P
ASP
227
B
ASP
227
P
ILE
231
B
ILE
231
P
GLY
235
B
GLY
235
P
ARG
241
B
ARG
241
P
ASN
285
B
ASN
285
P
LEU
290
B
LEU
290
P
VAL
267
B
VAL
267
P
VAL
270
B
VAL
270
P
LYS
246
B
LYS
246
P
LYS
248
B
LYS
248
P
GLU
279
B
GLU
279
P
ILE
281
B
ILE
281
P
GLY
351
B
GLY
351
P
ARG
354
B
ARG
354
P
ASN
367
B
ASN
367
P
LEU
374
B
LEU
374
P
LYS
315
B
LYS
315
P
ILE
322
B
ILE
322
P
ARG
393
B
ARG
393
P
LYS
402
B
LYS
402
P
ARG
385
B
ARG
385
P
GLU
390
B
GLU
390
P
GLN
341
B
GLN
341
P
PHE
344
B
PHE
344
P
THR
347
B
THR
347
P
THR
350
B
THR
350
BINDING SITE FOR RESIDUE MG P 407
P
MG
407
Software
5
BINDING SITE FOR RESIDUE SO4 P 408
P
SO4
408
Software
6
BINDING SITE FOR RESIDUE SO4 P 409
P
SO4
409
Software
4
BINDING SITE FOR RESIDUE MG R 77
R
MG
77
Software
2
BINDING SITE FOR RESIDUE MG R 179
R
MG
179
Software
2
BINDING SITE FOR RESIDUE CYS R 976
R
CYS
976
Software
6
BINDING SITE FOR RESIDUE GNP P 406
P
GNP
406
Software
22
P
THR
25
B
THR
25
5
1_555
P
THR
62
B
THR
62
5
1_555
P
GNP
406
I
GNP
5
1_555
P
HOH
410
K
HOH
5
1_555
P
HOH
419
K
HOH
5
1_555
P
ARG
339
B
ARG
339
6
1_555
P
VAL
352
B
VAL
352
6
1_555
P
ARG
354
B
ARG
354
6
1_555
P
HOH
442
K
HOH
6
1_555
P
HOH
463
K
HOH
6
1_555
P
HOH
548
K
HOH
6
1_555
P
MET
113
B
MET
113
4
1_555
P
PRO
114
B
PRO
114
4
1_555
P
ARG
117
B
ARG
117
4
1_555
P
HOH
423
K
HOH
4
1_555
R
C
75
A
C
73
2
1_555
R
A
76
A
A
74
2
1_555
R
G
70
A
G
68
2
14_555
R
G
70
A
G
68
2
1_555
P
HIS
67
B
HIS
67
6
1_555
P
HIS
273
B
HIS
273
6
1_555
P
ARG
274
B
ARG
274
6
1_555
P
ASN
285
B
ASN
285
6
1_555
P
VAL
286
B
VAL
286
6
1_555
R
A
76
A
A
74
6
1_555
P
VAL
20
B
VAL
20
22
1_555
P
ASP
21
B
ASP
21
22
1_555
P
HIS
22
B
HIS
22
22
1_555
P
GLY
23
B
GLY
23
22
1_555
P
LYS
24
B
LYS
24
22
1_555
P
THR
25
B
THR
25
22
1_555
P
THR
26
B
THR
26
22
1_555
P
TYR
47
B
TYR
47
22
1_555
P
ILE
61
B
ILE
61
22
1_555
P
THR
62
B
THR
62
22
1_555
P
GLY
84
B
GLY
84
22
1_555
P
ASN
136
B
ASN
136
22
1_555
P
LYS
137
B
LYS
137
22
1_555
P
ASP
139
B
ASP
139
22
1_555
P
MET
140
B
MET
140
22
1_555
P
SER
174
B
SER
174
22
1_555
P
ALA
175
B
ALA
175
22
1_555
P
LEU
176
B
LEU
176
22
1_555
P
MG
407
F
MG
22
1_555
P
HOH
410
K
HOH
22
1_555
P
HOH
419
K
HOH
22
1_555
P
HOH
524
K
HOH
22
1_555
22
orthorhombic
F 2 2 2