1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Bycroft, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK EMBO J. EMJODG 0897 0261-4189 18 297 305 10.1093/emboj/18.2.297 9889186 The structure of a PKD domain from polycystin-1: implications for polycystic kidney disease. 1999 10.2210/pdb1b4r/pdb pdb_00001b4r 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 7963.906 PROTEIN (PKD1_HUMAN) PKD DOMAIN 1 man polymer no no ATLVGPHGPLASGQLAAFHIAAPLPVTATRWDFGDGSAEVDAAGPAASHRYVLPGRYHVTAVLALGAGSALLGTDVQVEA ATLVGPHGPLASGQLAAFHIAAPLPVTATRWDFGDGSAEVDAAGPAASHRYVLPGRYHVTAVLALGAGSALLGTDVQVEA A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia Escherichia coli sample 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) BL21(DE3) PRSETA database_2 pdbx_struct_assembly pdbx_struct_oper_list struct_ref_seq_dif repository Initial release Version format compliance Version format compliance Database references Derived calculations 1 0 1999-01-06 1 1 2008-04-27 1 2 2011-07-13 1 3 2022-02-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details BNL Y RCSB 1998-12-28 REL REL LEAST RESTRAINT VIOLATION 50 20 3.0 298 K SA 1 BRUNGER refinement X-PLOR 3.1 structure solution XPLOR 500 Bruker AMX 500 ALA 8 n 1 ALA 8 A THR 9 n 2 THR 9 A LEU 10 n 3 LEU 10 A VAL 11 n 4 VAL 11 A GLY 12 n 5 GLY 12 A PRO 13 n 6 PRO 13 A HIS 14 n 7 HIS 14 A GLY 15 n 8 GLY 15 A PRO 16 n 9 PRO 16 A LEU 17 n 10 LEU 17 A ALA 18 n 11 ALA 18 A SER 19 n 12 SER 19 A GLY 20 n 13 GLY 20 A GLN 21 n 14 GLN 21 A LEU 22 n 15 LEU 22 A ALA 23 n 16 ALA 23 A ALA 24 n 17 ALA 24 A PHE 25 n 18 PHE 25 A HIS 26 n 19 HIS 26 A ILE 27 n 20 ILE 27 A ALA 28 n 21 ALA 28 A ALA 29 n 22 ALA 29 A PRO 30 n 23 PRO 30 A LEU 31 n 24 LEU 31 A PRO 32 n 25 PRO 32 A VAL 33 n 26 VAL 33 A THR 34 n 27 THR 34 A ALA 35 n 28 ALA 35 A THR 36 n 29 THR 36 A ARG 37 n 30 ARG 37 A TRP 38 n 31 TRP 38 A ASP 39 n 32 ASP 39 A PHE 40 n 33 PHE 40 A GLY 41 n 34 GLY 41 A ASP 42 n 35 ASP 42 A GLY 43 n 36 GLY 43 A SER 44 n 37 SER 44 A ALA 45 n 38 ALA 45 A GLU 46 n 39 GLU 46 A VAL 47 n 40 VAL 47 A ASP 48 n 41 ASP 48 A ALA 49 n 42 ALA 49 A ALA 50 n 43 ALA 50 A GLY 51 n 44 GLY 51 A PRO 52 n 45 PRO 52 A ALA 53 n 46 ALA 53 A ALA 54 n 47 ALA 54 A SER 55 n 48 SER 55 A HIS 56 n 49 HIS 56 A ARG 57 n 50 ARG 57 A TYR 58 n 51 TYR 58 A VAL 59 n 52 VAL 59 A LEU 60 n 53 LEU 60 A PRO 61 n 54 PRO 61 A GLY 62 n 55 GLY 62 A ARG 63 n 56 ARG 63 A TYR 64 n 57 TYR 64 A HIS 65 n 58 HIS 65 A VAL 66 n 59 VAL 66 A THR 67 n 60 THR 67 A ALA 68 n 61 ALA 68 A VAL 69 n 62 VAL 69 A LEU 70 n 63 LEU 70 A ALA 71 n 64 ALA 71 A LEU 72 n 65 LEU 72 A GLY 73 n 66 GLY 73 A ALA 74 n 67 ALA 74 A GLY 75 n 68 GLY 75 A SER 76 n 69 SER 76 A ALA 77 n 70 ALA 77 A LEU 78 n 71 LEU 78 A LEU 79 n 72 LEU 79 A GLY 80 n 73 GLY 80 A THR 81 n 74 THR 81 A ASP 82 n 75 ASP 82 A VAL 83 n 76 VAL 83 A GLN 84 n 77 GLN 84 A VAL 85 n 78 VAL 85 A GLU 86 n 79 GLU 86 A ALA 87 n 80 ALA 87 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O THR 9 A O THR 2 A N ALA 28 A N ALA 21 A O GLN 21 A O GLN 14 A N TYR 58 A N TYR 51 A O VAL 47 A O VAL 40 A N TRP 38 A N TRP 31 A O ALA 35 A O ALA 28 A N ALA 71 A N ALA 64 A O GLY 62 A O GLY 55 A N VAL 85 A N VAL 78 1 A ARG 37 0.316 SIDE CHAIN 1 A ARG 57 0.221 SIDE CHAIN 1 A ARG 63 0.151 SIDE CHAIN 2 A ARG 37 0.210 SIDE CHAIN 2 A ARG 57 0.306 SIDE CHAIN 2 A ARG 63 0.297 SIDE CHAIN 3 A ARG 37 0.316 SIDE CHAIN 3 A ARG 57 0.315 SIDE CHAIN 3 A ARG 63 0.239 SIDE CHAIN 4 A ARG 37 0.262 SIDE CHAIN 4 A ARG 57 0.193 SIDE CHAIN 4 A ARG 63 0.317 SIDE CHAIN 5 A ARG 37 0.190 SIDE CHAIN 5 A ARG 57 0.144 SIDE CHAIN 5 A ARG 63 0.249 SIDE CHAIN 6 A ARG 37 0.316 SIDE CHAIN 6 A ARG 57 0.243 SIDE CHAIN 6 A ARG 63 0.279 SIDE CHAIN 7 A ARG 37 0.160 SIDE CHAIN 7 A ARG 57 0.168 SIDE CHAIN 7 A ARG 63 0.249 SIDE CHAIN 8 A ARG 37 0.211 SIDE CHAIN 8 A ARG 57 0.162 SIDE CHAIN 8 A ARG 63 0.233 SIDE CHAIN 9 A ARG 37 0.312 SIDE CHAIN 9 A ARG 57 0.260 SIDE CHAIN 9 A ARG 63 0.262 SIDE CHAIN 10 A ARG 37 0.244 SIDE CHAIN 10 A ARG 57 0.199 SIDE CHAIN 10 A ARG 63 0.311 SIDE CHAIN 11 A ARG 37 0.232 SIDE CHAIN 11 A ARG 57 0.167 SIDE CHAIN 11 A ARG 63 0.308 SIDE CHAIN 12 A ARG 37 0.317 SIDE CHAIN 12 A ARG 57 0.158 SIDE CHAIN 12 A ARG 63 0.304 SIDE CHAIN 13 A ARG 37 0.283 SIDE CHAIN 13 A ARG 57 0.183 SIDE CHAIN 13 A ARG 63 0.315 SIDE CHAIN 14 A ARG 37 0.306 SIDE CHAIN 14 A ARG 57 0.189 SIDE CHAIN 14 A ARG 63 0.238 SIDE CHAIN 15 A ARG 37 0.316 SIDE CHAIN 15 A ARG 57 0.315 SIDE CHAIN 15 A ARG 63 0.239 SIDE CHAIN 16 A ARG 37 0.238 SIDE CHAIN 16 A ARG 57 0.207 SIDE CHAIN 16 A ARG 63 0.287 SIDE CHAIN 17 A ARG 37 0.305 SIDE CHAIN 17 A ARG 57 0.174 SIDE CHAIN 17 A ARG 63 0.313 SIDE CHAIN 18 A ARG 57 0.257 SIDE CHAIN 18 A ARG 63 0.304 SIDE CHAIN 19 A ARG 37 0.271 SIDE CHAIN 19 A ARG 57 0.212 SIDE CHAIN 19 A ARG 63 0.310 SIDE CHAIN 20 A ARG 37 0.261 SIDE CHAIN 20 A ARG 57 0.207 SIDE CHAIN 20 A ARG 63 0.254 SIDE CHAIN 1 A HIS 14 174.51 164.17 1 A ALA 29 176.56 -62.26 1 A LEU 31 -13.13 -64.58 1 A ASP 42 -98.49 35.70 1 A ALA 45 -71.20 -90.70 1 A PRO 52 -88.43 40.09 1 A ALA 54 -165.88 -168.86 1 A GLU 86 -110.59 -159.41 2 A HIS 14 161.94 -36.82 2 A HIS 26 -172.47 147.61 2 A ALA 29 172.80 -70.06 2 A ASP 42 -97.04 33.07 2 A ALA 45 -75.30 -86.96 2 A PRO 52 -88.50 38.91 2 A ALA 54 -165.18 -169.64 2 A GLU 86 -102.45 -160.98 3 A HIS 14 168.90 -38.87 3 A ALA 29 175.25 -61.86 3 A LEU 31 -15.42 -64.03 3 A ALA 35 -178.60 149.43 3 A ALA 45 -71.38 -98.28 3 A PRO 52 -88.43 42.63 4 A HIS 14 159.11 -35.63 4 A ALA 29 172.56 -71.85 4 A ASP 42 -109.06 -104.71 4 A ALA 45 -81.20 -85.01 4 A PRO 52 -88.45 41.75 4 A GLU 86 -126.58 -154.87 5 A HIS 14 152.25 175.28 5 A HIS 26 -174.93 149.52 5 A ALA 29 170.88 -72.36 5 A ASP 42 -105.42 -103.32 5 A ALA 45 -81.49 -85.37 5 A PRO 52 -88.83 40.79 5 A ALA 54 -171.59 -167.67 6 A HIS 14 163.16 -37.50 6 A ALA 29 169.18 -69.60 6 A ASP 42 -104.25 -104.48 6 A ALA 45 -80.74 -85.40 6 A PRO 52 -88.96 38.99 6 A ALA 54 -163.61 -166.79 6 A ALA 74 71.53 -0.38 6 A GLU 86 -107.66 -157.32 7 A HIS 14 158.87 -33.98 7 A HIS 26 -173.95 148.51 7 A ALA 29 172.31 -71.54 7 A ASP 42 -98.34 35.60 7 A ALA 45 -75.58 -89.99 7 A PRO 52 -88.97 40.99 7 A ALA 54 -171.55 -167.05 8 A HIS 14 158.52 -39.78 8 A HIS 26 -174.30 143.41 8 A ALA 29 173.30 -68.56 8 A ASP 42 -105.35 -102.95 8 A ALA 45 -80.43 -85.91 8 A PRO 52 -88.93 40.44 8 A ALA 54 -167.41 -168.34 9 A HIS 14 163.74 -37.99 9 A HIS 26 -171.27 144.51 9 A ALA 29 172.01 -68.24 9 A ASP 42 -104.35 -103.75 9 A ALA 45 -81.25 -84.22 9 A PRO 52 -89.53 40.74 9 A ALA 54 -168.06 -167.69 9 A GLU 86 -103.56 -147.97 10 A HIS 14 165.84 -38.77 10 A ALA 29 173.43 -68.67 10 A ASP 42 -98.79 31.15 10 A ALA 45 -76.21 -89.84 10 A PRO 52 -89.08 40.14 10 A ALA 54 -170.64 -171.76 11 A HIS 14 151.58 170.76 11 A ALA 29 -178.39 -61.70 11 A LEU 31 -12.96 -64.32 11 A ASP 42 -104.63 -105.72 11 A ALA 45 -81.24 -84.59 11 A PRO 52 -87.43 41.20 11 A ALA 54 -160.02 -168.32 12 A HIS 14 145.74 179.04 12 A ALA 29 -178.80 -66.00 12 A LEU 31 -9.93 -66.56 12 A ASP 42 -98.03 31.47 12 A ALA 45 -77.98 -88.97 12 A PRO 52 -87.92 39.75 13 A HIS 14 161.13 -37.19 13 A ALA 29 174.24 -68.87 13 A ASP 42 -101.25 -104.22 13 A ALA 45 -81.11 -83.91 13 A PRO 52 -89.77 40.48 13 A GLU 86 -121.21 -156.61 14 A HIS 14 150.29 -39.52 14 A ALA 29 174.05 -71.40 14 A LEU 31 -13.81 -63.79 14 A ALA 35 -176.48 139.27 14 A ASP 42 -95.57 34.97 14 A ALA 45 -71.49 -95.60 14 A PRO 52 -88.05 39.33 14 A GLU 86 -114.14 -162.96 15 A HIS 14 168.90 -38.87 15 A ALA 29 175.25 -61.86 15 A LEU 31 -15.42 -64.03 15 A ALA 35 -178.60 149.43 15 A ALA 45 -71.38 -98.28 15 A PRO 52 -88.43 42.63 16 A HIS 14 162.61 -36.36 16 A ALA 29 -179.80 -67.30 16 A LEU 31 -11.82 -66.21 16 A ASP 42 -101.06 -103.05 16 A ALA 45 -81.34 -87.66 16 A PRO 52 -87.69 41.00 17 A HIS 14 164.62 171.09 17 A ALA 29 176.44 -72.10 17 A ASP 42 -106.96 -104.87 17 A ALA 45 -81.17 -85.48 17 A PRO 52 -89.52 39.00 18 A HIS 14 157.52 -33.86 18 A ALA 29 -177.72 -66.34 18 A LEU 31 -8.81 -67.09 18 A ASP 42 -107.15 -104.52 18 A ALA 45 -81.36 -86.65 18 A PRO 52 -88.37 40.03 19 A HIS 14 174.35 162.01 19 A SER 19 -56.71 108.52 19 A ALA 29 179.15 -66.38 19 A LEU 31 -10.81 -66.52 19 A ALA 35 -174.20 146.82 19 A ASP 42 -93.47 -101.72 19 A ALA 45 -81.30 -85.02 19 A PRO 52 -86.55 41.60 20 A HIS 14 166.96 -39.13 20 A ALA 29 171.45 -69.22 20 A ASP 42 -102.27 -104.52 20 A ALA 45 -80.89 -85.96 20 A PRO 52 -89.06 41.63 PKD DOMAIN 1 FROM HUMAN POLYCYSTEIN-1 1 N N MEMBRANE PROTEIN PKD DOMAIN 1 FROM HUMAN POLYCYSTEIN-1, POLYCYSTIN (PRECURSOR), MEMBRANE PROTEIN PKD1_HUMAN UNP 1 P98161 275 354 1B4R 8 87 P98161 A 1 1 80 1 ASP conflict ALA 28 1B4R A P98161 UNP 302 21 3 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A THR 9 A THR 2 A VAL 11 A VAL 4 A GLN 21 A GLN 14 A ALA 28 A ALA 21 A ALA 53 A ALA 46 A TYR 58 A TYR 51 A GLU 46 A GLU 39 A ALA 50 A ALA 43 A ALA 35 A ALA 28 A ASP 39 A ASP 32 A GLY 62 A GLY 55 A ALA 71 A ALA 64 A SER 76 A SER 69 A VAL 85 A VAL 78 1 P 1