1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Korobka, A.
Cullinan, D.
Cosman, M.
Grollman, A.P.
Patel, D.J.
Eisenberg, M.
De Los Santos, C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C11 H14 N3 O7 P
331.219
N3,N4-ETHENO-2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
6-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)imidazo[1,2-c]pyrimidin-5(6H)-one
DNA linking
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
Y
13
N
N
Y
14
N
C
Y
15
N
N
Y
16
N
C
Y
17
N
C
N
18
N
N
Y
19
N
N
Y
20
N
C
Y
21
N
N
Y
22
N
C
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
O
N
38
N
P
N
39
N
O
N
40
N
O
N
41
N
O
N
42
N
C
N
43
R
C
N
44
N
O
N
45
S
C
N
46
N
O
N
47
N
C
N
48
R
C
N
49
N
N
N
50
N
C
N
51
N
O
N
52
N
N
N
53
N
C
N
54
N
N
N
55
N
C
N
56
N
C
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
O
N
72
N
P
N
73
N
O
N
74
N
O
N
75
N
O
N
76
N
C
N
77
R
C
N
78
N
O
N
79
S
C
N
80
N
O
N
81
N
C
N
82
R
C
Y
83
N
N
Y
84
N
C
Y
85
N
N
Y
86
N
C
N
87
N
C
N
88
N
O
N
89
N
N
N
90
N
C
N
91
N
N
N
92
N
N
Y
93
N
C
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
O
N
109
N
P
N
110
N
O
N
111
N
O
N
112
N
O
N
113
N
C
N
114
R
C
N
115
N
O
N
116
S
C
N
117
N
O
N
118
N
C
N
119
R
C
N
120
N
N
N
121
N
C
N
122
N
O
N
123
N
N
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
C
N
128
N
C
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
P
N
146
N
N
N
147
N
C
N
148
N
O
Y
149
N
N
Y
150
N
C
Y
151
N
N
N
152
N
C
N
153
N
C
Y
154
N
C
Y
155
N
C
N
156
R
C
N
157
N
C
N
158
S
C
N
159
N
O
N
160
R
C
N
161
N
O
N
162
N
C
N
163
N
O
N
164
N
O
N
165
N
O
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
Y
24
N
sing
Y
25
N
sing
Y
26
N
doub
N
27
N
sing
Y
28
N
sing
Y
29
N
sing
Y
30
N
doub
N
31
N
sing
Y
32
N
doub
N
33
N
sing
N
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
doub
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
sing
N
102
N
sing
Y
103
N
doub
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
Y
160
N
sing
Y
161
N
sing
Y
162
N
doub
N
163
N
sing
Y
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
Y
168
N
doub
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
35
13310
13318
10.1021/bi9605696
8873597
Solution structure of an oligodeoxynucleotide duplex containing the exocyclic lesion 3,N4-etheno-2'-deoxycytidine opposite 2'-deoxyadenosine, determined by NMR spectroscopy and restrained molecular dynamics.
1996
10.2210/pdb1b6y/pdb
pdb_00001b6y
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
3318.184
5'-D(*CP*GP*TP*AP*CP*(EDC)P*CP*AP*TP*GP*C)-3'
1
syn
polymer
3398.235
5'-D(*GP*CP*AP*TP*GP*AP*GP*TP*AP*CP*G)-3'
1
syn
polymer
no
yes
(DC)(DG)(DT)(DA)(DC)(EDC)(DC)(DA)(DT)(DG)(DC)
CGTACXCATGC
A
polydeoxyribonucleotide
no
no
(DG)(DC)(DA)(DT)(DG)(DA)(DG)(DT)(DA)(DC)(DG)
GCATGAGTACG
B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
-9.215
1
19
A
1
B
11
-2.901
A_DC1:DG11_B
1
-9.540
0.527
0.326
-0.218
1.365
1
19
A
2
B
10
-2.543
A_DG2:DC10_B
2
-16.722
-0.831
0.289
-0.384
0.327
1
20
A
3
B
9
-3.490
A_DT3:DA9_B
3
-14.883
-0.055
0.211
-0.175
4.849
1
20
A
4
B
8
-2.968
A_DA4:DT8_B
4
-10.051
0.231
0.386
-0.184
13.399
1
19
A
5
B
7
-1.943
A_DC5:DG7_B
5
-6.817
0.737
0.132
-0.319
-10.563
1
19
A
7
B
5
-1.284
A_DC7:DG5_B
6
1.829
0.623
0.432
-0.231
1.688
1
20
A
8
B
4
-2.820
A_DA8:DT4_B
7
-13.265
0.286
0.153
-0.154
-1.775
1
20
A
9
B
3
-2.554
A_DT9:DA3_B
8
-13.085
-0.169
0.164
-0.170
0.102
1
19
A
10
B
2
-1.817
A_DG10:DC2_B
9
-10.142
-0.504
0.200
-0.198
-10.551
1
19
A
11
B
1
-1.970
A_DC11:DG1_B
10
-2.083
0.691
0.442
-0.266
1.853
30.340
A
A
1
2
24.215
B
B
11
10
2.567
12.312
-0.239
-1.287
AA_DC1DG2:DC10DG11_BB
1
-2.276
4.477
27.692
-4.215
0.133
3.086
34.990
A
A
2
3
2.281
B
B
10
9
3.119
1.371
-0.223
-0.879
AA_DG2DT3:DA9DC10_BB
2
-0.585
0.974
34.960
-1.657
0.287
2.646
39.997
A
A
3
4
11.439
B
B
9
8
2.854
7.778
-0.012
-0.845
AA_DT3DA4:DT8DA9_BB
3
-0.545
0.802
39.260
-1.993
-0.035
2.971
35.517
A
A
4
5
-0.853
B
B
8
7
2.953
-0.520
0.399
-0.918
AA_DA4DC5:DG7DT8_BB
4
0.548
-0.899
35.509
-1.436
-0.582
1.910
30.542
A
A
7
8
20.621
B
B
5
4
2.582
10.624
-0.424
-1.345
AA_DC7DA8:DT4DG5_BB
5
3.303
-6.411
28.489
-4.055
1.272
3.263
34.306
A
A
8
9
-7.160
B
B
4
3
3.154
-4.213
-0.093
-1.105
AA_DA8DT9:DA3DT4_BB
6
0.015
-0.025
34.054
-1.223
0.160
2.486
35.204
A
A
9
10
14.306
B
B
3
2
2.859
8.570
0.719
-1.301
AA_DT9DG10:DC2DA3_BB
7
0.792
-1.322
34.168
-3.211
-1.091
3.819
42.894
A
A
10
11
-15.775
B
B
2
1
3.652
-11.401
-0.124
-1.130
AA_DG10DC11:DG1DC2_BB
8
-3.068
4.246
41.311
-0.224
-0.186
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_nmr_software
struct_conn
repository
Initial release
Version format compliance
Version format compliance
Atomic model
Data collection
Database references
Derived calculations
Other
1
0
1999-01-27
1
1
2008-03-24
1
2
2011-07-13
1
3
2012-01-18
1
4
2024-04-10
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_pdbx_nmr_software.name
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
Y
BNL
1999-01-19
REL
REL
THE STRUCTURE WAS DETERMINED USING 2D PROTON NMR FOLLOWED BY DISTANCE RESTRAINED MOLECULAR DYNAMICS SIMULATIONS, AND FURTHER REFINED USING THE FULL RELAXATION MATRIX BACK CALCULATION APPROACH.
2
2
NOESY
COSY
DQF-COSY
6.9
298
K
REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE.
RESTRAINED MOLECULAR DYNAMICS SIMULATIONS
BRUNGER
refinement
X-PLOR
3.1
structure solution
Felix
structure solution
X-PLOR
500
Bruker
AM
600
Bruker
AMX
C
1
n
1
DC
1
A
G
2
n
2
DG
2
A
T
3
n
3
DT
3
A
A
4
n
4
DA
4
A
C
5
n
5
DC
5
A
EDC
6
n
6
EDC
6
A
C
7
n
7
DC
7
A
A
8
n
8
DA
8
A
T
9
n
9
DT
9
A
G
10
n
10
DG
10
A
C
11
n
11
DC
11
A
G
1
n
1
DG
1
B
C
2
n
2
DC
2
B
A
3
n
3
DA
3
B
T
4
n
4
DT
4
B
G
5
n
5
DG
5
B
A
6
n
6
DA
6
B
G
7
n
7
DG
7
B
T
8
n
8
DT
8
B
A
9
n
9
DA
9
B
C
10
n
10
DC
10
B
G
11
n
11
DG
11
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
3.51
0.50
113.10
116.61
A
A
A
N7
C8
N9
DG
DG
DG
2
2
2
N
1
-3.63
0.60
122.90
119.27
A
A
A
C6
C5
C7
DT
DT
DT
3
3
3
N
1
1.87
0.30
108.30
110.17
A
A
A
O4'
C1'
N9
DG
DG
DG
10
10
10
N
1
6.67
0.30
108.30
114.97
A
A
A
O4'
C1'
N1
DC
DC
DC
11
11
11
N
1
3.19
0.50
113.10
116.29
B
B
B
N7
C8
N9
DG
DG
DG
1
1
1
N
1
5.08
0.30
108.30
113.38
B
B
B
O4'
C1'
N1
DC
DC
DC
2
2
2
N
1
3.03
0.50
113.10
116.13
B
B
B
N7
C8
N9
DG
DG
DG
5
5
5
N
1
3.05
0.30
108.30
111.35
B
B
B
O4'
C1'
N9
DG
DG
DG
7
7
7
N
1
1.96
0.30
108.30
110.26
B
B
B
O4'
C1'
N1
DC
DC
DC
10
10
10
N
1
6.85
0.30
108.30
115.15
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
1
3.10
0.50
113.10
116.20
B
B
B
N7
C8
N9
DG
DG
DG
11
11
11
N
2
3.76
0.60
118.90
122.66
A
A
A
N1
C2
O2
DC
DC
DC
1
1
1
N
2
3.33
0.50
113.10
116.43
A
A
A
N7
C8
N9
DG
DG
DG
2
2
2
N
2
1.81
0.30
108.30
110.11
A
A
A
O4'
C1'
N1
DT
DT
DT
3
3
3
N
2
-3.75
0.60
122.90
119.15
A
A
A
C6
C5
C7
DT
DT
DT
3
3
3
N
2
2.14
0.30
108.30
110.44
A
A
A
O4'
C1'
N9
DG
DG
DG
10
10
10
N
2
6.71
0.30
108.30
115.01
A
A
A
O4'
C1'
N1
DC
DC
DC
11
11
11
N
2
3.23
0.50
113.10
116.33
B
B
B
N7
C8
N9
DG
DG
DG
1
1
1
N
2
5.06
0.30
108.30
113.36
B
B
B
O4'
C1'
N1
DC
DC
DC
2
2
2
N
2
2.90
0.30
108.30
111.20
B
B
B
O4'
C1'
N9
DG
DG
DG
7
7
7
N
2
2.06
0.30
108.30
110.36
B
B
B
O4'
C1'
N1
DC
DC
DC
10
10
10
N
2
6.50
0.30
108.30
114.80
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
2
3.15
0.50
113.10
116.25
B
B
B
N7
C8
N9
DG
DG
DG
11
11
11
N
1
A
A
C4
N4
DC
DC
1
1
0.094
0.009
1.335
1.429
N
1
A
A
C2
N2
DG
DG
2
2
0.084
0.010
1.341
1.425
N
1
A
A
C5
C7
DT
DT
3
3
0.037
0.006
1.496
1.533
N
1
A
A
C6
N6
DA
DA
4
4
0.091
0.008
1.335
1.426
N
1
A
A
C4
N4
DC
DC
5
5
0.093
0.009
1.335
1.428
N
1
A
A
C4
N4
DC
DC
7
7
0.093
0.009
1.335
1.428
N
1
A
A
C6
N6
DA
DA
8
8
0.093
0.008
1.335
1.428
N
1
A
A
C5
C7
DT
DT
9
9
0.037
0.006
1.496
1.533
N
1
A
A
C2
N2
DG
DG
10
10
0.082
0.010
1.341
1.423
N
1
A
A
C4
N4
DC
DC
11
11
0.091
0.009
1.335
1.426
N
1
B
B
C2
N2
DG
DG
1
1
0.081
0.010
1.341
1.422
N
1
B
B
C4
N4
DC
DC
2
2
0.095
0.009
1.335
1.430
N
1
B
B
C6
N6
DA
DA
3
3
0.094
0.008
1.335
1.429
N
1
B
B
C5
C7
DT
DT
4
4
0.036
0.006
1.496
1.532
N
1
B
B
C2
N2
DG
DG
5
5
0.081
0.010
1.341
1.422
N
1
B
B
C6
N6
DA
DA
6
6
0.093
0.008
1.335
1.428
N
1
B
B
C2
N2
DG
DG
7
7
0.079
0.010
1.341
1.420
N
1
B
B
C5
C7
DT
DT
8
8
0.039
0.006
1.496
1.535
N
1
B
B
C6
N6
DA
DA
9
9
0.092
0.008
1.335
1.427
N
1
B
B
C4
N4
DC
DC
10
10
0.092
0.009
1.335
1.427
N
1
B
B
C2
N2
DG
DG
11
11
0.086
0.010
1.341
1.427
N
2
A
A
C4
N4
DC
DC
1
1
0.095
0.009
1.335
1.430
N
2
A
A
C2
N2
DG
DG
2
2
0.083
0.010
1.341
1.424
N
2
A
A
C6
N6
DA
DA
4
4
0.092
0.008
1.335
1.427
N
2
A
A
C4
N4
DC
DC
5
5
0.092
0.009
1.335
1.427
N
2
A
A
C4
N4
DC
DC
7
7
0.094
0.009
1.335
1.429
N
2
A
A
C6
N6
DA
DA
8
8
0.092
0.008
1.335
1.427
N
2
A
A
C2
N2
DG
DG
10
10
0.082
0.010
1.341
1.423
N
2
A
A
C4
N4
DC
DC
11
11
0.092
0.009
1.335
1.427
N
2
B
B
C2
N2
DG
DG
1
1
0.080
0.010
1.341
1.421
N
2
B
B
C4
N4
DC
DC
2
2
0.095
0.009
1.335
1.430
N
2
B
B
C6
N6
DA
DA
3
3
0.092
0.008
1.335
1.427
N
2
B
B
C2
N2
DG
DG
5
5
0.082
0.010
1.341
1.423
N
2
B
B
C6
N6
DA
DA
6
6
0.093
0.008
1.335
1.428
N
2
B
B
C2
N2
DG
DG
7
7
0.078
0.010
1.341
1.419
N
2
B
B
C5
C7
DT
DT
8
8
0.038
0.006
1.496
1.534
N
2
B
B
C6
N6
DA
DA
9
9
0.094
0.008
1.335
1.429
N
2
B
B
C4
N4
DC
DC
10
10
0.093
0.009
1.335
1.428
N
2
B
B
C2
N2
DG
DG
11
11
0.087
0.010
1.341
1.428
N
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
phasing
X-PLOR
3.1
3,N4-ETHENO-2'-DEOXYCYTIDINE OPPOSITE ADENINE IN AN 11-MER DUPLEX, SOLUTION STRUCTURE FROM NMR AND MOLECULAR DYNAMICS, 2 STRUCTURES
1
N
N
2
N
N
covale
1.620
both
A
DC
5
A
O3'
DC
5
1_555
A
EDC
6
A
P
EDC
6
1_555
covale
1.619
both
A
EDC
6
A
O3'
EDC
6
1_555
A
DC
7
A
P
DC
7
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
B
DG
11
B
N1
DG
11
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
B
DG
11
B
O6
DG
11
1_555
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
B
DG
11
B
N2
DG
11
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
2
1_555
B
DC
10
B
N3
DC
10
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
2
1_555
B
DC
10
B
O2
DC
10
1_555
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
2
1_555
B
DC
10
B
N4
DC
10
1_555
hydrog
WATSON-CRICK
A
DT
3
A
N3
DT
3
1_555
B
DA
9
B
N1
DA
9
1_555
hydrog
WATSON-CRICK
A
DT
3
A
O4
DT
3
1_555
B
DA
9
B
N6
DA
9
1_555
hydrog
WATSON-CRICK
A
DA
4
A
N1
DA
4
1_555
B
DT
8
B
N3
DT
8
1_555
hydrog
WATSON-CRICK
A
DA
4
A
N6
DA
4
1_555
B
DT
8
B
O4
DT
8
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N3
DC
5
1_555
B
DG
7
B
N1
DG
7
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N4
DC
5
1_555
B
DG
7
B
O6
DG
7
1_555
hydrog
WATSON-CRICK
A
DC
5
A
O2
DC
5
1_555
B
DG
7
B
N2
DG
7
1_555
hydrog
WATSON-CRICK
A
DC
7
A
N3
DC
7
1_555
B
DG
5
B
N1
DG
5
1_555
hydrog
WATSON-CRICK
A
DC
7
A
N4
DC
7
1_555
B
DG
5
B
O6
DG
5
1_555
hydrog
WATSON-CRICK
A
DC
7
A
O2
DC
7
1_555
B
DG
5
B
N2
DG
5
1_555
hydrog
WATSON-CRICK
A
DA
8
A
N1
DA
8
1_555
B
DT
4
B
N3
DT
4
1_555
hydrog
WATSON-CRICK
A
DA
8
A
N6
DA
8
1_555
B
DT
4
B
O4
DT
4
1_555
hydrog
WATSON-CRICK
A
DT
9
A
N3
DT
9
1_555
B
DA
3
B
N1
DA
3
1_555
hydrog
WATSON-CRICK
A
DT
9
A
O4
DT
9
1_555
B
DA
3
B
N6
DA
3
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N1
DG
10
1_555
B
DC
2
B
N3
DC
2
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N2
DG
10
1_555
B
DC
2
B
O2
DC
2
1_555
hydrog
WATSON-CRICK
A
DG
10
A
O6
DG
10
1_555
B
DC
2
B
N4
DC
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N3
DC
11
1_555
B
DG
1
B
N1
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N4
DC
11
1_555
B
DG
1
B
O6
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
11
A
O2
DC
11
1_555
B
DG
1
B
N2
DG
1
1_555
DNA
DEOXYRIBONUCLEIC ACID, ETHENODC, EDC, EXOCYCLIC LESION, DNA
1B6Y
PDB
1
1B6Y
1B6Y
PDB
2
1B6Y
1
11
1B6Y
1
11
1B6Y
A
1
1
11
1
11
1B6Y
1
11
1B6Y
B
2
1
11
1
P 1