0.018523
0.000000
0.000000
0.000000
0.013125
0.000000
0.000000
0.000000
0.011312
0.00000
0.00000
0.00000
Plaksin, D.
Chacko, S.
Navaza, J.
Margulies, D.H.
Padlan, E.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
53.987
76.187
88.402
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
289
1153
1161
10.1006/jmbi.1999.2855
10373358
The X-ray crystal structure of a Valpha2.6Jalpha38 mouse T cell receptor domain at 2.5 A resolution: alternate modes of dimerization and crystal packing.
1999
US
J.Exp.Med.
JEMEAV
0774
0022-1007
184
1251
1258
10.1084/jem.184.4.1251
8879196
A T cell receptor V alpha domain expressed in bacteria: does it dimerize in solution?
1996
10.2210/pdb1b88/pdb
pdb_00001b88
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
1995-06-15
RIGAKU RAXIS II
NI FILTER
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
12699.169
T CELL RECEPTOR V-ALPHA DOMAIN
V-ALPHA DOMAIN
2
man
polymer
18.015
water
24
nat
water
TCR
no
no
MQQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSNKKEDGRFTIFFNKREKKLSLHIADS
QPGDSATYFCAASASFGDNSKLIWGLGTSLVVNP
MQQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSNKKEDGRFTIFFNKREKKLSLHIADS
QPGDSATYFCAASASFGDNSKLIWGLGTSLVVNP
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
BALB/C
Escherichia
Escherichia coli
sample
T LYMPHOCYTE
B4.2.3 T CELL HYBRIDOMA
PLASMA MEMBRANE
TCRAV2S6J38
10090
Mus musculus
INCLUSION BODIES
469008
Escherichia coli BL21(DE3)
BL21(DE3)
PLASMID
PET3A
1
3.76
67
VAPOR DIFFUSION, HANGING DROP
7.0
SODIUM FORMATE, pH 7.0, VAPOR DIFFUSION, HANGING DROP
SODIUM FORMATE
1
SODIUM FORMATE
2
citation
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Data collection
Database references
Refinement description
1
0
1999-02-16
1
1
2008-04-26
1
2
2011-07-13
1
3
2019-11-06
1
4
2023-08-09
_citation.page_last
_citation.pdbx_database_id_PubMed
_citation.title
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
BNL
Y
RCSB
1999-02-09
REL
HOH
water
1TCR
PDB ENTRY 1TCR
PDB
experimental model
HOH
402
2
HOH
HOH
402
A
HOH
403
2
HOH
HOH
403
A
HOH
405
2
HOH
HOH
405
A
HOH
406
2
HOH
HOH
406
A
HOH
407
2
HOH
HOH
407
A
HOH
408
2
HOH
HOH
408
A
HOH
413
2
HOH
HOH
413
A
HOH
416
2
HOH
HOH
416
A
HOH
401
2
HOH
HOH
401
B
HOH
404
2
HOH
HOH
404
B
HOH
409
2
HOH
HOH
409
B
HOH
410
2
HOH
HOH
410
B
HOH
411
2
HOH
HOH
411
B
HOH
412
2
HOH
HOH
412
B
HOH
414
2
HOH
HOH
414
B
HOH
415
2
HOH
HOH
415
B
HOH
417
2
HOH
HOH
417
B
HOH
418
2
HOH
HOH
418
B
HOH
419
2
HOH
HOH
419
B
HOH
420
2
HOH
HOH
420
B
HOH
421
2
HOH
HOH
421
B
HOH
422
2
HOH
HOH
422
B
HOH
423
2
HOH
HOH
423
B
HOH
424
2
HOH
HOH
424
B
MET
1
n
1
MET
1
A
GLN
2
n
2
GLN
2
A
GLN
3
n
3
GLN
3
A
VAL
4
n
4
VAL
4
A
ARG
5
n
5
ARG
5
A
GLN
6
n
6
GLN
6
A
SER
7
n
7
SER
7
A
PRO
8
n
8
PRO
8
A
GLN
9
n
9
GLN
9
A
SER
10
n
10
SER
10
A
LEU
11
n
11
LEU
11
A
THR
12
n
12
THR
12
A
VAL
13
n
13
VAL
13
A
TRP
14
n
14
TRP
14
A
GLU
15
n
15
GLU
15
A
GLY
16
n
16
GLY
16
A
GLU
17
n
17
GLU
17
A
THR
18
n
18
THR
18
A
ALA
19
n
19
ALA
19
A
ILE
20
n
20
ILE
20
A
LEU
21
n
21
LEU
21
A
ASN
22
n
22
ASN
22
A
CYS
23
n
23
CYS
23
A
SER
24
n
24
SER
24
A
TYR
25
n
25
TYR
25
A
GLU
26
n
26
GLU
26
A
ASN
27
n
27
ASN
27
A
SER
28
n
28
SER
28
A
ALA
29
n
29
ALA
29
A
PHE
30
n
30
PHE
30
A
ASP
31
n
31
ASP
31
A
TYR
32
n
32
TYR
32
A
PHE
33
n
33
PHE
33
A
PRO
34
n
34
PRO
34
A
TRP
35
n
35
TRP
35
A
TYR
36
n
36
TYR
36
A
GLN
37
n
37
GLN
37
A
GLN
38
n
38
GLN
38
A
PHE
39
n
39
PHE
39
A
PRO
40
n
40
PRO
40
A
GLY
41
n
41
GLY
41
A
GLU
42
n
42
GLU
42
A
GLY
43
n
43
GLY
43
A
PRO
44
n
44
PRO
44
A
ALA
45
n
45
ALA
45
A
LEU
46
n
46
LEU
46
A
LEU
47
n
47
LEU
47
A
ILE
48
n
48
ILE
48
A
SER
49
n
49
SER
49
A
ILE
50
n
50
ILE
50
A
LEU
51
n
51
LEU
51
A
SER
52
n
52
SER
52
A
VAL
53
n
53
VAL
53
A
SER
54
n
54
SER
54
A
ASN
55
n
55
ASN
55
A
LYS
56
n
56
LYS
56
A
LYS
57
n
57
LYS
57
A
GLU
58
n
58
GLU
58
A
ASP
59
n
59
ASP
59
A
GLY
60
n
60
GLY
60
A
ARG
61
n
61
ARG
61
A
PHE
62
n
62
PHE
62
A
THR
63
n
63
THR
63
A
ILE
64
n
64
ILE
64
A
PHE
65
n
65
PHE
65
A
PHE
66
n
66
PHE
66
A
ASN
67
n
67
ASN
67
A
LYS
68
n
68
LYS
68
A
ARG
69
n
69
ARG
69
A
GLU
70
n
70
GLU
70
A
LYS
71
n
71
LYS
71
A
LYS
72
n
72
LYS
72
A
LEU
73
n
73
LEU
73
A
SER
74
n
74
SER
74
A
LEU
75
n
75
LEU
75
A
HIS
76
n
76
HIS
76
A
ILE
77
n
77
ILE
77
A
ALA
78
n
78
ALA
78
A
ASP
79
n
79
ASP
79
A
SER
80
n
80
SER
80
A
GLN
81
n
81
GLN
81
A
PRO
82
n
82
PRO
82
A
GLY
83
n
83
GLY
83
A
ASP
84
n
84
ASP
84
A
SER
85
n
85
SER
85
A
ALA
86
n
86
ALA
86
A
THR
87
n
87
THR
87
A
TYR
88
n
88
TYR
88
A
PHE
89
n
89
PHE
89
A
CYS
90
n
90
CYS
90
A
ALA
91
n
91
ALA
91
A
ALA
92
n
92
ALA
92
A
SER
93
n
93
SER
93
A
ALA
94
n
94
ALA
94
A
SER
95
n
95
SER
95
A
PHE
96
n
96
PHE
96
A
GLY
97
n
97
GLY
97
A
ASP
98
n
98
ASP
98
A
ASN
99
n
99
ASN
99
A
SER
100
n
100
SER
100
A
LYS
101
n
101
LYS
101
A
LEU
102
n
102
LEU
102
A
ILE
103
n
103
ILE
103
A
TRP
104
n
104
TRP
104
A
GLY
105
n
105
GLY
105
A
LEU
106
n
106
LEU
106
A
GLY
107
n
107
GLY
107
A
THR
108
n
108
THR
108
A
SER
109
n
109
SER
109
A
LEU
110
n
110
LEU
110
A
VAL
111
n
111
VAL
111
A
VAL
112
n
112
VAL
112
A
ASN
113
n
113
ASN
113
A
PRO
114
n
114
PRO
114
A
MET
201
n
1
MET
201
B
GLN
202
n
2
GLN
202
B
GLN
203
n
3
GLN
203
B
VAL
204
n
4
VAL
204
B
ARG
205
n
5
ARG
205
B
GLN
206
n
6
GLN
206
B
SER
207
n
7
SER
207
B
PRO
208
n
8
PRO
208
B
GLN
209
n
9
GLN
209
B
SER
210
n
10
SER
210
B
LEU
211
n
11
LEU
211
B
THR
212
n
12
THR
212
B
VAL
213
n
13
VAL
213
B
TRP
214
n
14
TRP
214
B
GLU
215
n
15
GLU
215
B
GLY
216
n
16
GLY
216
B
GLU
217
n
17
GLU
217
B
THR
218
n
18
THR
218
B
ALA
219
n
19
ALA
219
B
ILE
220
n
20
ILE
220
B
LEU
221
n
21
LEU
221
B
ASN
222
n
22
ASN
222
B
CYS
223
n
23
CYS
223
B
SER
224
n
24
SER
224
B
TYR
225
n
25
TYR
225
B
GLU
226
n
26
GLU
226
B
ASN
227
n
27
ASN
227
B
SER
228
n
28
SER
228
B
ALA
229
n
29
ALA
229
B
PHE
230
n
30
PHE
230
B
ASP
231
n
31
ASP
231
B
TYR
232
n
32
TYR
232
B
PHE
233
n
33
PHE
233
B
PRO
234
n
34
PRO
234
B
TRP
235
n
35
TRP
235
B
TYR
236
n
36
TYR
236
B
GLN
237
n
37
GLN
237
B
GLN
238
n
38
GLN
238
B
PHE
239
n
39
PHE
239
B
PRO
240
n
40
PRO
240
B
GLY
241
n
41
GLY
241
B
GLU
242
n
42
GLU
242
B
GLY
243
n
43
GLY
243
B
PRO
244
n
44
PRO
244
B
ALA
245
n
45
ALA
245
B
LEU
246
n
46
LEU
246
B
LEU
247
n
47
LEU
247
B
ILE
248
n
48
ILE
248
B
SER
249
n
49
SER
249
B
ILE
250
n
50
ILE
250
B
LEU
251
n
51
LEU
251
B
SER
252
n
52
SER
252
B
VAL
253
n
53
VAL
253
B
SER
254
n
54
SER
254
B
ASN
255
n
55
ASN
255
B
LYS
256
n
56
LYS
256
B
LYS
257
n
57
LYS
257
B
GLU
258
n
58
GLU
258
B
ASP
259
n
59
ASP
259
B
GLY
260
n
60
GLY
260
B
ARG
261
n
61
ARG
261
B
PHE
262
n
62
PHE
262
B
THR
263
n
63
THR
263
B
ILE
264
n
64
ILE
264
B
PHE
265
n
65
PHE
265
B
PHE
266
n
66
PHE
266
B
ASN
267
n
67
ASN
267
B
LYS
268
n
68
LYS
268
B
ARG
269
n
69
ARG
269
B
GLU
270
n
70
GLU
270
B
LYS
271
n
71
LYS
271
B
LYS
272
n
72
LYS
272
B
LEU
273
n
73
LEU
273
B
SER
274
n
74
SER
274
B
LEU
275
n
75
LEU
275
B
HIS
276
n
76
HIS
276
B
ILE
277
n
77
ILE
277
B
ALA
278
n
78
ALA
278
B
ASP
279
n
79
ASP
279
B
SER
280
n
80
SER
280
B
GLN
281
n
81
GLN
281
B
PRO
282
n
82
PRO
282
B
GLY
283
n
83
GLY
283
B
ASP
284
n
84
ASP
284
B
SER
285
n
85
SER
285
B
ALA
286
n
86
ALA
286
B
THR
287
n
87
THR
287
B
TYR
288
n
88
TYR
288
B
PHE
289
n
89
PHE
289
B
CYS
290
n
90
CYS
290
B
ALA
291
n
91
ALA
291
B
ALA
292
n
92
ALA
292
B
SER
293
n
93
SER
293
B
ALA
294
n
94
ALA
294
B
SER
295
n
95
SER
295
B
PHE
296
n
96
PHE
296
B
GLY
297
n
97
GLY
297
B
ASP
298
n
98
ASP
298
B
ASN
299
n
99
ASN
299
B
SER
300
n
100
SER
300
B
LYS
301
n
101
LYS
301
B
LEU
302
n
102
LEU
302
B
ILE
303
n
103
ILE
303
B
TRP
304
n
104
TRP
304
B
GLY
305
n
105
GLY
305
B
LEU
306
n
106
LEU
306
B
GLY
307
n
107
GLY
307
B
THR
308
n
108
THR
308
B
SER
309
n
109
SER
309
B
LEU
310
n
110
LEU
310
B
VAL
311
n
111
VAL
311
B
VAL
312
n
112
VAL
312
B
ASN
313
n
113
ASN
313
B
PRO
314
n
114
PRO
314
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ARG
5
A
O
ARG
5
A
N
SER
24
A
N
SER
24
A
O
ALA
19
A
O
ALA
19
A
N
ILE
77
A
N
ILE
77
A
O
LYS
72
A
O
LYS
72
A
N
ASN
67
A
N
ASN
67
A
O
ILE
64
A
O
ILE
64
A
N
LYS
57
A
N
LYS
57
A
O
THR
87
A
O
THR
87
A
N
GLN
38
A
N
GLN
38
A
O
PHE
33
A
O
PHE
33
A
N
ILE
50
A
N
ILE
50
A
O
ALA
92
A
O
ALA
92
A
N
ILE
103
A
N
ILE
103
B
O
ARG
205
B
O
ARG
5
B
N
SER
224
B
N
SER
24
B
O
ALA
219
B
O
ALA
19
B
N
ILE
277
B
N
ILE
77
B
O
LYS
272
B
O
LYS
72
B
N
ASN
267
B
N
ASN
67
B
O
ILE
264
B
O
ILE
64
B
N
LYS
257
B
N
LYS
57
B
O
VAL
213
B
O
VAL
13
B
N
VAL
311
B
N
VAL
111
B
O
THR
287
B
O
THR
87
B
N
GLN
238
B
N
GLN
38
B
O
TRP
235
B
O
TRP
35
B
N
ILE
248
B
N
ILE
48
1
9.16
1.50
119.30
128.46
A
A
A
C
N
CA
PHE
PRO
PRO
39
40
40
Y
1
A
GLN
3
-45.64
-71.19
1
A
PRO
40
-23.13
-28.73
1
A
GLU
42
-104.06
-166.22
1
A
LYS
71
73.65
35.31
1
A
SER
80
-38.26
91.69
1
A
SER
85
-62.54
98.72
1
B
SER
249
-111.38
-166.85
1
B
ILE
250
-179.30
124.80
1
B
ARG
261
59.95
18.93
1
B
PRO
282
-54.64
-9.86
1
B
ASP
284
-66.29
6.31
1
B
SER
295
-179.21
149.13
1
B
ASN
299
-44.49
95.42
PARHCSDX.PRO
TOPHCSDX.PRO
PARAM19.EAP
TOPH.EAP
0.324
0.224
2.5
10.0
617
12193
5
88.8
RANDOM
1
THROUGHOUT
3
MOLECULAR REPLACEMENT
PDB ENTRY 1TCR
2.5
10.0
72
2260
0
0
2188
0.007
1.729
26.89
1.282
2.2
15.0
1B88
13408
0.127
1
13
88.8
2.5
2.6
39.1
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
refinement
X-PLOR
3.1
V-ALPHA 2.6 MOUSE T CELL RECEPTOR (TCR) DOMAIN
1
N
N
1
N
N
2
N
N
2
N
N
A
PRO
82
A
PRO
82
HELX_P
A
ASP
84
A
ASP
84
5
1
3
B
PRO
282
B
PRO
82
HELX_P
B
ASP
284
B
ASP
84
5
2
3
disulf
2.031
A
CYS
23
A
SG
CYS
23
1_555
A
CYS
90
A
SG
CYS
90
1_555
disulf
2.024
B
CYS
223
B
SG
CYS
23
1_555
B
CYS
290
B
SG
CYS
90
1_555
IMMUNE SYSTEM
T CELL RECEPTOR, MHC CLASS I, HUMAN IMMUNODEFICIENCY VIRUS, MOLECULAR RECOGNITION, IMMUNE SYSTEM
A
SER
7
A
SER
7
1
A
PRO
8
A
PRO
8
-0.18
B
SER
207
B
SER
7
1
B
PRO
208
B
PRO
8
-0.09
given
0.934100
0.352093
-0.059063
0.354109
-0.934792
0.027753
-0.045440
-0.046838
-0.997868
-11.33330
68.82410
53.37910
U63546
GB
1
1518838
56
169
1B88
1
114
1518838
A
1
1
114
56
169
1B88
201
314
1518838
B
1
1
114
5
3
2
5
2
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
VAL
4
A
VAL
4
A
SER
7
A
SER
7
A
ALA
19
A
ALA
19
A
TYR
25
A
TYR
25
A
LYS
72
A
LYS
72
A
ILE
77
A
ILE
77
A
PHE
62
A
PHE
62
A
ASN
67
A
ASN
67
A
LYS
56
A
LYS
56
A
GLU
58
A
GLU
58
A
THR
87
A
THR
87
A
CYS
90
A
CYS
90
A
TYR
32
A
TYR
32
A
GLN
38
A
GLN
38
A
ALA
45
A
ALA
45
A
LEU
51
A
LEU
51
A
ALA
91
A
ALA
91
A
SER
93
A
SER
93
A
LEU
102
A
LEU
102
A
TRP
104
A
TRP
104
B
VAL
204
B
VAL
4
B
SER
207
B
SER
7
B
ALA
219
B
ALA
19
B
TYR
225
B
TYR
25
B
LYS
272
B
LYS
72
B
ILE
277
B
ILE
77
B
PHE
262
B
PHE
62
B
ASN
267
B
ASN
67
B
LYS
256
B
LYS
56
B
GLU
258
B
GLU
58
B
THR
212
B
THR
12
B
TRP
214
B
TRP
14
B
VAL
311
B
VAL
111
B
ASN
313
B
ASN
113
B
THR
287
B
THR
87
B
CYS
290
B
CYS
90
B
TRP
235
B
TRP
35
B
GLN
238
B
GLN
38
B
ALA
245
B
ALA
45
B
ILE
248
B
ILE
48
19
orthorhombic
P 21 21 21