0.015972 0.009221 0.000000 0.000000 0.018443 0.000000 0.000000 0.000000 0.007567 0.00000 0.00000 0.00000 Wu, J. Adomat, J.M. Ridky, T.W. Louis, J.M. Leis, J. Harrison, R.W. Weber, I.T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 62.610 62.610 132.150 C40 H70 N11 O8 1 833.053 N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl-L-alanyl-L-norleucinamide Inhibitor analogues of CA-p2 peptide-like C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N C N 7 N C N 8 N N N 9 N C N 10 N N N 11 N N N 12 N N N 13 S C N 14 N C N 15 N O N 16 N C N 17 N C N 18 N C N 19 N N N 20 S C N 21 N C N 22 N C N 23 N C N 24 N C N 25 N C N 26 N N N 27 S C N 28 N C N 29 N O N 30 N C Y 31 N C Y 32 N C Y 33 N C Y 34 N C Y 35 N C Y 36 N C N 37 N N N 38 S C N 39 N C N 40 N O N 41 N C N 42 N C N 43 N C N 44 N O N 45 N O N 46 N N N 47 S C N 48 N C N 49 N O N 50 N C N 51 N N N 52 S C N 53 N C N 54 N O N 55 N C N 56 N C N 57 N C N 58 N C N 59 N N N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N N N 131 S C N 132 N C N 133 N O N 134 N C N 135 N O N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N N N 144 S C N 145 N C N 146 N O N 147 N C N 148 N C N 149 N C N 150 N N N 151 N C N 152 N N N 153 N N N 154 N O N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N N N 171 S C N 172 N C N 173 N O N 174 N C N 175 N C N 176 N O N 177 N N N 178 N O N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N N N 188 S C N 189 N C N 190 N O N 191 N C N 192 N C N 193 N O N 194 N O N 195 N O N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N N N 204 R C N 205 N C N 206 N O N 207 N C N 208 N S N 209 N O N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N N N 218 S C N 219 N C N 220 N O N 221 N C N 222 N C N 223 N C N 224 N O N 225 N N N 226 N O N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N N N 238 S C N 239 N C N 240 N O N 241 N C N 242 N C N 243 N C N 244 N O N 245 N O N 246 N O N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N N N 257 N C N 258 N C N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N N N 267 S C N 268 N C N 269 N O N 270 N C Y 271 N C Y 272 N N Y 273 N C Y 274 N C Y 275 N N N 276 N O N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N O N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 S C N 295 N C N 296 N C N 297 N C N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N N N 313 S C N 314 N C N 315 N O N 316 N C N 317 N C N 318 N C N 319 N C N 320 N O N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N N N 335 S C N 336 N C N 337 N O N 338 N C N 339 N C N 340 N C N 341 N C N 342 N N N 343 N O N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N N N 360 S C N 361 N C N 362 N O N 363 N C N 364 N C N 365 N S N 366 N C N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N N N 380 S C N 381 N C N 382 N O N 383 N C Y 384 N C Y 385 N C Y 386 N C Y 387 N C Y 388 N C Y 389 N C N 390 N O N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N N N 403 S C N 404 N C N 405 N O N 406 N C N 407 N C N 408 N C N 409 N O N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N N N 420 S C N 421 N C N 422 N O N 423 N C N 424 N O N 425 N O N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N N N 434 S C N 435 N C N 436 N O N 437 R C N 438 N O N 439 N C N 440 N O N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N N N 451 S C N 452 N C N 453 N O N 454 N C Y 455 N C Y 456 N C Y 457 N C Y 458 N N Y 459 N C Y 460 N C Y 461 N C Y 462 N C Y 463 N C N 464 N O N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N N N 478 S C N 479 N C N 480 N O N 481 N C Y 482 N C Y 483 N C Y 484 N C Y 485 N C Y 486 N C Y 487 N C N 488 N O N 489 N O N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N N N 502 S C N 503 N C N 504 N O N 505 N C N 506 N C N 507 N C N 508 N O N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N H N 516 N H N 517 N H N 518 N H N 519 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N doub N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N doub N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N doub N 65 N sing N 66 N sing N 67 N sing Y 68 N doub Y 69 N sing Y 70 N sing N 71 N sing Y 72 N doub N 73 N sing Y 74 N doub N 75 N sing Y 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N doub N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N doub N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N doub N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N doub N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N doub N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N doub N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N doub N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N doub N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N doub N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N doub N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N doub N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing Y 269 N sing Y 270 N doub Y 271 N doub N 272 N sing Y 273 N sing N 274 N sing Y 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N doub N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N doub N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N doub N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N doub N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N doub N 373 N sing N 374 N sing N 375 N sing N 376 N sing Y 377 N doub Y 378 N sing Y 379 N sing N 380 N sing Y 381 N doub N 382 N sing Y 383 N doub N 384 N sing Y 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N doub N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N doub N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N doub N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N doub N 442 N sing N 443 N sing N 444 N sing N 445 N sing Y 446 N doub Y 447 N sing Y 448 N sing N 449 N sing Y 450 N doub Y 451 N sing Y 452 N sing N 453 N sing Y 454 N sing Y 455 N doub N 456 N sing Y 457 N doub N 458 N sing Y 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N doub N 470 N sing N 471 N sing N 472 N sing N 473 N sing Y 474 N doub Y 475 N sing Y 476 N sing N 477 N sing Y 478 N doub N 479 N sing Y 480 N doub N 481 N sing Y 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N doub N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing US Biochemistry BICHAW 0033 0006-2960 37 4518 4526 10.1021/bi972183g 9521772 Structural basis for specificity of retroviral proteases. 1998 10.2210/pdb1bai/pdb pdb_00001bai 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 293 1 MIRRORS IMAGE PLATE 1996-08-15 RIGAKU NI FILTER SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RUH2R 13648.806 PROTEASE 2 nat polymer PURIFIED FROM THE INCLUSION BODY FRACTION 833.053 N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl-L-alanyl-L-norleucinamide 1 syn non-polymer 18.015 water 85 nat water no no LAMTMEHKDRPLVRVILTNTGSHPVKQRSVYITALLDTGADDTVISEEDWPTDWPVMEAANPQIHGIGGGIPVRKSRDMI ELGVINRDGSLERPLLLFPLVAMTPVNILGRDCLQGLGLRLTNL LAMTMEHKDRPLVRVILTNTGSHPVKQRSVYITALLDTGADDTVISEEDWPTDWPVMEAANPQIHGIGGGIPVRKSRDMI ELGVINRDGSLERPLLLFPLVAMTPVNILGRDCLQGLGLRLTNL A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 11886 Rous sarcoma virus 1 2.66 53.67 chem_comp_atom chem_comp_bond database_2 pdbx_database_status struct_ref_seq_dif struct_site entity pdbx_entity_src_syn repository Initial release Version format compliance Atomic model Database references Derived calculations Non-polymer description Structure summary Version format compliance Other Data collection Database references Derived calculations Other Source and taxonomy Structure summary 1 0 1999-01-13 1 1 2008-03-24 1 2 2011-07-13 1 3 2012-12-12 1 4 2024-02-07 1 5 2024-03-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _entity.details Y BNL 1998-04-17 REL 0Q4 N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl-L-alanyl-L-norleucinamide HOH water PEPTIDE INHIBITOR 0Q4 HAS A REDUCED PEPTIDE (-CH2-NH) INSTEAD OF THE NORMAL PEPTIDE LINK (-CO-NH). Inhibitor N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl- L-alanyl-L-norleucinamide Peptide-like ARG 1 2 0Q4 0Q4 125 A HOH 501 3 HOH HOH 501 A HOH 601 3 HOH HOH 601 A HOH 602 3 HOH HOH 602 A HOH 603 3 HOH HOH 603 A HOH 604 3 HOH HOH 604 A HOH 605 3 HOH HOH 605 A HOH 607 3 HOH HOH 607 A HOH 608 3 HOH HOH 608 A HOH 610 3 HOH HOH 610 A HOH 611 3 HOH HOH 611 A HOH 612 3 HOH HOH 612 A HOH 613 3 HOH HOH 613 A HOH 614 3 HOH HOH 614 A HOH 615 3 HOH HOH 615 A HOH 616 3 HOH HOH 616 A HOH 617 3 HOH HOH 617 A HOH 618 3 HOH HOH 618 A HOH 619 3 HOH HOH 619 A HOH 620 3 HOH HOH 620 A HOH 621 3 HOH HOH 621 A HOH 623 3 HOH HOH 623 A HOH 624 3 HOH HOH 624 A HOH 625 3 HOH HOH 625 A HOH 627 3 HOH HOH 627 A HOH 628 3 HOH HOH 628 A HOH 629 3 HOH HOH 629 A HOH 630 3 HOH HOH 630 A HOH 631 3 HOH HOH 631 A HOH 632 3 HOH HOH 632 A HOH 633 3 HOH HOH 633 A HOH 634 3 HOH HOH 634 A HOH 635 3 HOH HOH 635 A HOH 636 3 HOH HOH 636 A HOH 637 3 HOH HOH 637 A HOH 638 3 HOH HOH 638 A HOH 639 3 HOH HOH 639 A HOH 640 3 HOH HOH 640 A HOH 642 3 HOH HOH 642 A HOH 643 3 HOH HOH 643 A HOH 644 3 HOH HOH 644 A HOH 646 3 HOH HOH 646 A HOH 647 3 HOH HOH 647 A HOH 648 3 HOH HOH 648 A HOH 650 3 HOH HOH 650 A HOH 651 3 HOH HOH 651 A HOH 654 3 HOH HOH 654 A HOH 657 3 HOH HOH 657 A HOH 662 3 HOH HOH 662 A HOH 664 3 HOH HOH 664 A HOH 669 3 HOH HOH 669 A HOH 674 3 HOH HOH 674 A HOH 694 3 HOH HOH 694 A HOH 696 3 HOH HOH 696 A HOH 697 3 HOH HOH 697 A HOH 606 3 HOH HOH 606 B HOH 609 3 HOH HOH 609 B HOH 622 3 HOH HOH 622 B HOH 626 3 HOH HOH 626 B HOH 645 3 HOH HOH 645 B HOH 652 3 HOH HOH 652 B HOH 653 3 HOH HOH 653 B HOH 655 3 HOH HOH 655 B HOH 656 3 HOH HOH 656 B HOH 658 3 HOH HOH 658 B HOH 659 3 HOH HOH 659 B HOH 660 3 HOH HOH 660 B HOH 661 3 HOH HOH 661 B HOH 665 3 HOH HOH 665 B HOH 666 3 HOH HOH 666 B HOH 667 3 HOH HOH 667 B HOH 671 3 HOH HOH 671 B HOH 672 3 HOH HOH 672 B HOH 675 3 HOH HOH 675 B HOH 676 3 HOH HOH 676 B HOH 677 3 HOH HOH 677 B HOH 678 3 HOH HOH 678 B HOH 680 3 HOH HOH 680 B HOH 681 3 HOH HOH 681 B HOH 682 3 HOH HOH 682 B HOH 683 3 HOH HOH 683 B HOH 684 3 HOH HOH 684 B HOH 685 3 HOH HOH 685 B HOH 687 3 HOH HOH 687 B HOH 691 3 HOH HOH 691 B HOH 700 3 HOH HOH 700 B LEU 1 n 1 LEU 1 A ALA 2 n 2 ALA 2 A MET 3 n 3 MET 3 A THR 4 n 4 THR 4 A MET 5 n 5 MET 5 A GLU 6 n 6 GLU 6 A HIS 7 n 7 HIS 7 A LYS 8 n 8 LYS 8 A ASP 9 n 9 ASP 9 A ARG 10 n 10 ARG 10 A PRO 11 n 11 PRO 11 A LEU 12 n 12 LEU 12 A VAL 13 n 13 VAL 13 A ARG 14 n 14 ARG 14 A VAL 15 n 15 VAL 15 A ILE 16 n 16 ILE 16 A LEU 17 n 17 LEU 17 A THR 18 n 18 THR 18 A ASN 19 n 19 ASN 19 A THR 20 n 20 THR 20 A GLY 21 n 21 GLY 21 A SER 22 n 22 SER 22 A HIS 23 n 23 HIS 23 A PRO 24 n 24 PRO 24 A VAL 25 n 25 VAL 25 A LYS 26 n 26 LYS 26 A GLN 27 n 27 GLN 27 A ARG 28 n 28 ARG 28 A SER 29 n 29 SER 29 A VAL 30 n 30 VAL 30 A TYR 31 n 31 TYR 31 A ILE 32 n 32 ILE 32 A THR 33 n 33 THR 33 A ALA 34 n 34 ALA 34 A LEU 35 n 35 LEU 35 A LEU 36 n 36 LEU 36 A ASP 37 n 37 ASP 37 A THR 38 n 38 THR 38 A GLY 39 n 39 GLY 39 A ALA 40 n 40 ALA 40 A ASP 41 n 41 ASP 41 A ASP 42 n 42 ASP 42 A THR 43 n 43 THR 43 A VAL 44 n 44 VAL 44 A ILE 45 n 45 ILE 45 A SER 46 n 46 SER 46 A GLU 47 n 47 GLU 47 A GLU 48 n 48 GLU 48 A ASP 49 n 49 ASP 49 A TRP 50 n 50 TRP 50 A PRO 51 n 51 PRO 51 A THR 52 n 52 THR 52 A ASP 53 n 53 ASP 53 A TRP 54 n 54 TRP 54 A PRO 55 n 55 PRO 55 A VAL 56 n 56 VAL 56 A MET 57 n 57 MET 57 A GLU 58 n 58 GLU 58 A ALA 59 n 59 ALA 59 A ALA 60 n 60 ALA 60 A ASN 61 n 61 ASN 61 A PRO 62 n 62 PRO 62 A GLN 63 n 63 GLN 63 A ILE 64 n 64 ILE 64 A HIS 65 n 65 HIS 65 A GLY 66 n 66 GLY 66 A ILE 67 n 67 ILE 67 A GLY 68 n 68 GLY 68 A GLY 69 n 69 GLY 69 A GLY 70 n 70 GLY 70 A ILE 71 n 71 ILE 71 A PRO 72 n 72 PRO 72 A VAL 73 n 73 VAL 73 A ARG 74 n 74 ARG 74 A LYS 75 n 75 LYS 75 A SER 76 n 76 SER 76 A ARG 77 n 77 ARG 77 A ASP 78 n 78 ASP 78 A MET 79 n 79 MET 79 A ILE 80 n 80 ILE 80 A GLU 81 n 81 GLU 81 A LEU 82 n 82 LEU 82 A GLY 83 n 83 GLY 83 A VAL 84 n 84 VAL 84 A ILE 85 n 85 ILE 85 A ASN 86 n 86 ASN 86 A ARG 87 n 87 ARG 87 A ASP 88 n 88 ASP 88 A GLY 89 n 89 GLY 89 A SER 90 n 90 SER 90 A LEU 91 n 91 LEU 91 A GLU 92 n 92 GLU 92 A ARG 93 n 93 ARG 93 A PRO 94 n 94 PRO 94 A LEU 95 n 95 LEU 95 A LEU 96 n 96 LEU 96 A LEU 97 n 97 LEU 97 A PHE 98 n 98 PHE 98 A PRO 99 n 99 PRO 99 A LEU 100 n 100 LEU 100 A VAL 101 n 101 VAL 101 A ALA 102 n 102 ALA 102 A MET 103 n 103 MET 103 A THR 104 n 104 THR 104 A PRO 105 n 105 PRO 105 A VAL 106 n 106 VAL 106 A ASN 107 n 107 ASN 107 A ILE 108 n 108 ILE 108 A LEU 109 n 109 LEU 109 A GLY 110 n 110 GLY 110 A ARG 111 n 111 ARG 111 A ASP 112 n 112 ASP 112 A CYS 113 n 113 CYS 113 A LEU 114 n 114 LEU 114 A GLN 115 n 115 GLN 115 A GLY 116 n 116 GLY 116 A LEU 117 n 117 LEU 117 A GLY 118 n 118 GLY 118 A LEU 119 n 119 LEU 119 A ARG 120 n 120 ARG 120 A LEU 121 n 121 LEU 121 A THR 122 n 122 THR 122 A ASN 123 n 123 ASN 123 A LEU 124 n 124 LEU 124 A LEU 1 n 1 LEU 1 B ALA 2 n 2 ALA 2 B MET 3 n 3 MET 3 B THR 4 n 4 THR 4 B MET 5 n 5 MET 5 B GLU 6 n 6 GLU 6 B HIS 7 n 7 HIS 7 B LYS 8 n 8 LYS 8 B ASP 9 n 9 ASP 9 B ARG 10 n 10 ARG 10 B PRO 11 n 11 PRO 11 B LEU 12 n 12 LEU 12 B VAL 13 n 13 VAL 13 B ARG 14 n 14 ARG 14 B VAL 15 n 15 VAL 15 B ILE 16 n 16 ILE 16 B LEU 17 n 17 LEU 17 B THR 18 n 18 THR 18 B ASN 19 n 19 ASN 19 B THR 20 n 20 THR 20 B GLY 21 n 21 GLY 21 B SER 22 n 22 SER 22 B HIS 23 n 23 HIS 23 B PRO 24 n 24 PRO 24 B VAL 25 n 25 VAL 25 B LYS 26 n 26 LYS 26 B GLN 27 n 27 GLN 27 B ARG 28 n 28 ARG 28 B SER 29 n 29 SER 29 B VAL 30 n 30 VAL 30 B TYR 31 n 31 TYR 31 B ILE 32 n 32 ILE 32 B THR 33 n 33 THR 33 B ALA 34 n 34 ALA 34 B LEU 35 n 35 LEU 35 B LEU 36 n 36 LEU 36 B ASP 37 n 37 ASP 37 B THR 38 n 38 THR 38 B GLY 39 n 39 GLY 39 B ALA 40 n 40 ALA 40 B ASP 41 n 41 ASP 41 B ASP 42 n 42 ASP 42 B THR 43 n 43 THR 43 B VAL 44 n 44 VAL 44 B ILE 45 n 45 ILE 45 B SER 46 n 46 SER 46 B GLU 47 n 47 GLU 47 B GLU 48 n 48 GLU 48 B ASP 49 n 49 ASP 49 B TRP 50 n 50 TRP 50 B PRO 51 n 51 PRO 51 B THR 52 n 52 THR 52 B ASP 53 n 53 ASP 53 B TRP 54 n 54 TRP 54 B PRO 55 n 55 PRO 55 B VAL 56 n 56 VAL 56 B MET 57 n 57 MET 57 B GLU 58 n 58 GLU 58 B ALA 59 n 59 ALA 59 B ALA 60 n 60 ALA 60 B ASN 61 n 61 ASN 61 B PRO 62 n 62 PRO 62 B GLN 63 n 63 GLN 63 B ILE 64 n 64 ILE 64 B HIS 65 n 65 HIS 65 B GLY 66 n 66 GLY 66 B ILE 67 n 67 ILE 67 B GLY 68 n 68 GLY 68 B GLY 69 n 69 GLY 69 B GLY 70 n 70 GLY 70 B ILE 71 n 71 ILE 71 B PRO 72 n 72 PRO 72 B VAL 73 n 73 VAL 73 B ARG 74 n 74 ARG 74 B LYS 75 n 75 LYS 75 B SER 76 n 76 SER 76 B ARG 77 n 77 ARG 77 B ASP 78 n 78 ASP 78 B MET 79 n 79 MET 79 B ILE 80 n 80 ILE 80 B GLU 81 n 81 GLU 81 B LEU 82 n 82 LEU 82 B GLY 83 n 83 GLY 83 B VAL 84 n 84 VAL 84 B ILE 85 n 85 ILE 85 B ASN 86 n 86 ASN 86 B ARG 87 n 87 ARG 87 B ASP 88 n 88 ASP 88 B GLY 89 n 89 GLY 89 B SER 90 n 90 SER 90 B LEU 91 n 91 LEU 91 B GLU 92 n 92 GLU 92 B ARG 93 n 93 ARG 93 B PRO 94 n 94 PRO 94 B LEU 95 n 95 LEU 95 B LEU 96 n 96 LEU 96 B LEU 97 n 97 LEU 97 B PHE 98 n 98 PHE 98 B PRO 99 n 99 PRO 99 B LEU 100 n 100 LEU 100 B VAL 101 n 101 VAL 101 B ALA 102 n 102 ALA 102 B MET 103 n 103 MET 103 B THR 104 n 104 THR 104 B PRO 105 n 105 PRO 105 B VAL 106 n 106 VAL 106 B ASN 107 n 107 ASN 107 B ILE 108 n 108 ILE 108 B LEU 109 n 109 LEU 109 B GLY 110 n 110 GLY 110 B ARG 111 n 111 ARG 111 B ASP 112 n 112 ASP 112 B CYS 113 n 113 CYS 113 B LEU 114 n 114 LEU 114 B GLN 115 n 115 GLN 115 B GLY 116 n 116 GLY 116 B LEU 117 n 117 LEU 117 B GLY 118 n 118 GLY 118 B LEU 119 n 119 LEU 119 B ARG 120 n 120 ARG 120 B LEU 121 n 121 LEU 121 B THR 122 n 122 THR 122 B ASN 123 n 123 ASN 123 B LEU 124 n 124 LEU 124 B author_and_software_defined_assembly PISA 2 dimeric 5570 -25 11730 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ILE 32 A O ILE 32 A N VAL 15 A N VAL 15 A O ARG 14 A O ARG 14 A N ILE 85 A N ILE 85 A O ILE 80 A O ILE 80 A N LEU 97 A N LEU 97 A O ILE 45 A O ILE 45 A N LEU 100 A N LEU 100 A O MET 57 A O MET 57 A N LYS 75 A N LYS 75 A O ILE 64 A O ILE 64 A N ILE 71 A N ILE 71 B O LEU 95 B O LEU 95 B N LEU 82 B N LEU 82 B O GLU 81 B O GLU 81 B N THR 18 B N THR 18 B O VAL 13 B O VAL 13 B N ALA 34 B N ALA 34 B O LEU 35 B O LEU 35 B N LEU 109 B N LEU 109 B O ILE 45 B O ILE 45 B N LEU 100 B N LEU 100 1 B B H H ASP TRP 53 54 1.34 1 A A O HH22 GLY ARG 21 28 1.58 1 18.29 2.30 115.30 133.59 A A A CA CB CG LEU LEU LEU 121 121 121 N 1 A PRO 11 -67.36 69.19 1 A HIS 23 159.77 139.34 1 A THR 52 -47.37 -11.56 1 A ALA 60 88.03 -26.21 1 A SER 90 -37.14 158.32 1 B ALA 2 -157.10 88.05 1 B LYS 8 -36.32 -97.17 1 B THR 52 -68.12 88.00 1 B ASP 53 -175.77 7.01 1 B ALA 59 -6.22 146.65 1 B ALA 60 75.00 -97.30 1 B PRO 62 -69.15 71.03 1 B GLN 63 -53.54 -132.02 1 B ILE 64 61.50 76.62 1 B ILE 67 -68.08 95.82 1 B ARG 87 -63.37 87.76 1 B ASP 88 161.11 -11.13 1 B GLU 92 -89.65 -144.60 PARACSDX.PRO TOPHCSDX.PRO PARAM19.SOL TOPH19.SOL 18.5 0.2930000 0.1750000 0.1750000 2.4 8.0 9273 76.8 RANDOM 100000. 0.1 1 2. MOLECULAR REPLACEMENT 2.4 8.0 85 2054 59 0 1910 0.018 2.56 26.59 2.12 0.2441000 0.1750000 2.51 98 852 8 2.4 8. 1BAI 9601 2. 0.0943000 0.1750000 1 76.8 2.40 2.51 1 model building X-PLOR 3.1 refinement X-PLOR 3.1 data reduction R-AXIS data scaling R-AXIS phasing X-PLOR 3.1 Crystal structure of Rous sarcoma virus protease in complex with inhibitor 1 N N 1 N N 2 N N 3 N N 3 N N A ARG 111 A ARG 111 HELX_P A GLY 116 A GLY 116 1 1 6 B ARG 111 B ARG 111 HELX_P B LEU 114 B LEU 114 1 2 4 HYDROLASE/HYDROLASE INHIBITOR PROTEIN-MEDIATED INTERACTION, VIRAL MATURATION, HYDROLASE-HYDROLASE INHIBITOR complex O92805_9RETR UNP 1 1 O92805 MEAVIKVISSACKTYCGKTSPSKKEIGAMLSLLQKEGLLMSPSDLYSPGSWDPITAALSQRAMILGKSGELKTWGLVLGA LKAAREEQVTSEQAKFWLGLGGGRVSPPGPECIEKPATERRIDKGEEVGETTVQRDAKMAPEETATPKTVGTSCYHCGTA IGCNCATASAPPPPYVGSGLYPSLAGVGEQQGQGGDTPPGAEQSRAEPGHAGQAPGPALTDWARVREELASTGPPVVAMP VVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTVI AAATRDPRHPANGQGRGERTNLNRLKGLADGMVGNPQGQAALLRPGELVAITASALQAFREVARLAEPAGPWADIMQGPS ESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRTAPSTLTTPGEIIKYVLDRQKTAPLTDQGIAAAMS SAIQPLIMAVVNRERDGQTGSGGRARGLCYTCGSPGHYQAQCPKKRKSGNSRERCQLCNGMGHNAKQCRKRDGNQGQRPG KGLSSGPWPGPEPPAVSLAMTMEHKDRPLVRVILTNTGSHPVKQRSVYITALLDSGADITIISEEDWPTDWPVMEAANPQ IHGIGGGIPMRKSRDMIELGVINRDGSLERPLLLFPAVAMVRGSILGRDCLQGLGLRLTNL 578 701 1BAI 1 124 O92805 A 1 1 124 578 701 1BAI 1 124 O92805 B 1 1 124 1 SER variant THR 38 1BAI A O92805 UNP 615 38 1 ILE variant ASP 42 1BAI A O92805 UNP 619 42 1 ILE variant VAL 44 1BAI A O92805 UNP 621 44 1 MET variant VAL 73 1BAI A O92805 UNP 650 73 1 ALA variant LEU 100 1BAI A O92805 UNP 677 100 1 VAL variant THR 104 1BAI A O92805 UNP 681 104 1 ARG conflict PRO 105 1BAI A O92805 UNP 682 105 1 GLY conflict VAL 106 1BAI A O92805 UNP 683 106 1 SER variant ASN 107 1BAI A O92805 UNP 684 107 2 SER variant THR 38 1BAI B O92805 UNP 615 38 2 ILE variant ASP 42 1BAI B O92805 UNP 619 42 2 ILE variant VAL 44 1BAI B O92805 UNP 621 44 2 MET variant VAL 73 1BAI B O92805 UNP 650 73 2 ALA variant LEU 100 1BAI B O92805 UNP 677 100 2 VAL variant THR 104 1BAI B O92805 UNP 681 104 2 ARG conflict PRO 105 1BAI B O92805 UNP 682 105 2 GLY conflict VAL 106 1BAI B O92805 UNP 683 106 2 SER variant ASN 107 1BAI B O92805 UNP 684 107 4 2 2 2 5 2 anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel parallel A ILE 32 A ILE 32 A LEU 35 A LEU 35 A LEU 12 A LEU 12 A ASN 19 A ASN 19 A ILE 80 A ILE 80 A ILE 85 A ILE 85 A LEU 95 A LEU 95 A LEU 97 A LEU 97 A VAL 44 A VAL 44 A SER 46 A SER 46 A LEU 100 A LEU 100 A ALA 102 A ALA 102 A VAL 56 A VAL 56 A GLU 58 A GLU 58 A ARG 74 A ARG 74 A SER 76 A SER 76 A GLN 63 A GLN 63 A HIS 65 A HIS 65 A GLY 70 A GLY 70 A PRO 72 A PRO 72 B LEU 95 B LEU 95 B LEU 97 B LEU 97 B ILE 80 B ILE 80 B ILE 85 B ILE 85 B LEU 12 B LEU 12 B ASN 19 B ASN 19 B SER 29 B SER 29 B ASP 37 B ASP 37 B ILE 108 B ILE 108 B GLY 110 B GLY 110 B VAL 44 B VAL 44 B SER 46 B SER 46 B LEU 100 B LEU 100 B ALA 102 B ALA 102 BINDING SITE FOR RESIDUE 0Q4 A 125 A 0Q4 125 Software 26 A LEU 35 A LEU 35 26 1_555 A ASP 37 A ASP 37 26 1_555 A GLY 39 A GLY 39 26 1_555 A ALA 40 A ALA 40 26 1_555 A ASP 41 A ASP 41 26 1_555 A ASP 42 A ASP 42 26 1_555 A ASN 61 A ASN 61 26 1_555 A GLN 63 A GLN 63 26 1_555 A ILE 64 A ILE 64 26 1_555 A HIS 65 A HIS 65 26 1_555 A GLY 66 A GLY 66 26 1_555 A ILE 67 A ILE 67 26 1_555 A PRO 105 A PRO 105 26 1_555 A HOH 501 D HOH 26 1_555 A HOH 607 D HOH 26 6_554 A HOH 643 D HOH 26 1_555 A HOH 696 D HOH 26 1_555 B LEU 35 B LEU 35 26 1_555 B GLY 39 B GLY 39 26 1_555 B ALA 40 B ALA 40 26 1_555 B ASP 41 B ASP 41 26 1_555 B GLN 63 B GLN 63 26 1_555 B HIS 65 B HIS 65 26 1_555 B GLY 66 B GLY 66 26 1_555 B ILE 67 B ILE 67 26 1_555 B VAL 106 B VAL 106 26 1_555 170 P 65