0.018031 0.000000 0.000000 0.000000 0.013924 0.000000 0.000000 0.000000 0.012847 0.00000 0.00000 0.00000 SEE REMARK 5. Vermersch, P.S. Tesmer, J.J.G. Quiocho, F.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 55.460 71.820 77.840 C3 H7 N O2 89.093 y ALANINE L-peptide linking C5 H10 O5 150.130 alpha-L-arabinopyranose alpha-L-arabinose; L-arabinose; arabinose L-saccharide, alpha linking C5 H10 O5 150.130 beta-L-arabinopyranose beta-L-arabinose; L-arabinose; arabinose L-saccharide, beta linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 R C N 15 R C N 16 S C N 17 S C N 18 N C N 19 N O N 20 N O N 21 N O N 22 N O N 23 N O N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 S C N 35 R C N 36 S C N 37 S C N 38 N C N 39 N O N 40 N O N 41 N O N 42 N O N 43 N O N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N N N 55 S C N 56 N C N 57 N O N 58 N C N 59 N C N 60 N C N 61 N N N 62 N C N 63 N N N 64 N N N 65 N O N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N N N 82 S C N 83 N C N 84 N O N 85 N C N 86 N C N 87 N O N 88 N N N 89 N O N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N N N 99 S C N 100 N C N 101 N O N 102 N C N 103 N C N 104 N O N 105 N O N 106 N O N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N N N 115 R C N 116 N C N 117 N O N 118 N C N 119 N S N 120 N O N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N N N 129 S C N 130 N C N 131 N O N 132 N C N 133 N C N 134 N C N 135 N O N 136 N N N 137 N O N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N N N 149 S C N 150 N C N 151 N O N 152 N C N 153 N C N 154 N C N 155 N O N 156 N O N 157 N O N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N N N 168 N C N 169 N C N 170 N O N 171 N O N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N N N 178 S C N 179 N C N 180 N O N 181 N C Y 182 N C Y 183 N N Y 184 N C Y 185 N C Y 186 N N N 187 N O N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N O N 199 N H N 200 N H N 201 N N N 202 S C N 203 N C N 204 N O N 205 S C N 206 N C N 207 N C N 208 N C N 209 N O N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N N N 224 S C N 225 N C N 226 N O N 227 N C N 228 N C N 229 N C N 230 N C N 231 N O N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N N N 246 S C N 247 N C N 248 N O N 249 N C N 250 N C N 251 N C N 252 N C N 253 N N N 254 N O N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 S C N 272 N C N 273 N O N 274 N C N 275 N C N 276 N S N 277 N C N 278 N O N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C Y 295 N C Y 296 N C Y 297 N C Y 298 N C Y 299 N C Y 300 N C N 301 N O N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N N N 314 S C N 315 N C N 316 N O N 317 N C N 318 N C N 319 N C N 320 N O N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N N N 331 S C N 332 N C N 333 N O N 334 N C N 335 N O N 336 N O N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N N N 345 S C N 346 N C N 347 N O N 348 R C N 349 N O N 350 N C N 351 N O N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N N N 362 S C N 363 N C N 364 N O N 365 N C Y 366 N C Y 367 N C Y 368 N C Y 369 N N Y 370 N C Y 371 N C Y 372 N C Y 373 N C Y 374 N C N 375 N O N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N N N 389 S C N 390 N C N 391 N O N 392 N C Y 393 N C Y 394 N C Y 395 N C Y 396 N C Y 397 N C Y 398 N C N 399 N O N 400 N O N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N N N 413 S C N 414 N C N 415 N O N 416 N C N 417 N C N 418 N C N 419 N O N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N doub N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N doub N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N doub N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N doub N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N doub N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N doub N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N doub N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N doub N 176 N sing N 177 N sing N 178 N sing N 179 N sing Y 180 N sing Y 181 N doub Y 182 N doub N 183 N sing Y 184 N sing N 185 N sing Y 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N doub N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N doub N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing Y 288 N doub Y 289 N sing Y 290 N sing N 291 N sing Y 292 N doub N 293 N sing Y 294 N doub N 295 N sing Y 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N doub N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N doub N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N doub N 353 N sing N 354 N sing N 355 N sing N 356 N sing Y 357 N doub Y 358 N sing Y 359 N sing N 360 N sing Y 361 N doub Y 362 N sing Y 363 N sing N 364 N sing Y 365 N sing Y 366 N doub N 367 N sing Y 368 N doub N 369 N sing Y 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N doub N 381 N sing N 382 N sing N 383 N sing N 384 N sing Y 385 N doub Y 386 N sing Y 387 N sing N 388 N sing Y 389 N doub N 390 N sing Y 391 N doub N 392 N sing Y 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N doub N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing US J.Biol.Chem. JBCHA3 0071 0021-9258 265 16592 16603 2204627 A Pro to Gly mutation in the hinge of the arabinose-binding protein enhances binding and alters specificity. Sugar-binding and crystallographic studies. 1990 UK Nature NATUAS 0006 0028-0836 340 404 Substrate Specificity and Affinity of a Protein Modulated by Bound Water Molecules 1989 UK Nature NATUAS 0006 0028-0836 310 381 Novel Stereospecificity of the L-Arabinose-Binding Protein 1984 US J.Biol.Chem. JBCHA3 0071 0021-9258 257 1131 Hinge-Bending in L-Arabinose-Binding Protein. The "Venus'S-Flytrap" Model 1982 UK J.Mol.Biol. JMOBAK 0070 0022-2836 146 341 Structure of the L-Arabinose-Binding Protein from Escherichia Coli at 2.4 Angstroms Resolution 1981 US J.Biol.Chem. JBCHA3 0071 0021-9258 256 13213 L-Arabinose-Binding Protein-Sugar Complex at 2.4 Angstroms Resolution. Stereochemistry and Evidence for a Structural Change 1981 US J.Biol.Chem. JBCHA3 0071 0021-9258 256 13218 The Radius of Gyration of L-Arabinose-Binding Protein Decreases Upon Binding of Ligand 1981 US J.Biol.Chem. JBCHA3 0071 0021-9258 254 7521 The Thiol Group of the L-Arabinose-Binding Protein. Chromophoric Labeling and Chemical Identification of the Sugar-Binding Site 1979 US J.Biol.Chem. JBCHA3 0071 0021-9258 254 7529 Location of the Sugar-Binding Site of L-Arabinose-Binding Protein. Sugar Derivative Syntheses, Sugar Binding Specificity, and Difference Fourier Analyses 1979 US J.Biol.Chem. JBCHA3 0071 0021-9258 252 5142 The 2.8-Angstroms Resolution Structure of the L-Arabinose-Binding Protein from Escherichia Coli 1977 US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 73 2186 Structure of L-Arabinose-Binding Protein from Escherichia Coli at 5 Angstroms Resolution and Preliminary Results at 3.5 Angstroms 1976 10.2210/pdb1bap/pdb pdb_00001bap 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 x-ray 1 1.0 33210.930 L-ARABINOSE-BINDING PROTEIN 1 man polymer 150.130 alpha-L-arabinopyranose 1 man non-polymer 150.130 beta-L-arabinopyranose 1 man non-polymer 18.015 water 154 man water no no ENLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARG YDMKVIAVDDQFVNAKGKPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMDALK AAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGVDAVSEL SKAQATGFYGSLLGSPDVHGYKSSEMLYNWVAKDVEPPKFTEVTDVVLITRDNFKEELEKKGLGGK ENLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARG YDMKVIAVDDQFVNAKGKPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMDALK AAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGVDAVSEL SKAQATGFYGSLLGSPDVHGYKSSEMLYNWVAKDVEPPKFTEVTDVVLITRDNFKEELEKKGLGGK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia sample 562 Escherichia coli 2.33 47.28 atom_site chem_comp entity pdbx_chem_comp_identifier pdbx_database_status pdbx_entity_nonpoly pdbx_nonpoly_scheme struct_conn struct_ref_seq_dif struct_site struct_site_gen chem_comp chem_comp_atom chem_comp_bond database_2 repository Initial release Carbohydrate remediation repository Remediation Version format compliance Version format compliance Atomic model Data collection Database references Derived calculations Other Structure summary Data collection Database references Structure summary 1 0 1992-01-15 1 1 2008-03-24 1 2 2011-07-13 2 0 2020-07-29 2 1 2024-02-07 _atom_site.label_alt_id _chem_comp.name _chem_comp.type _entity.pdbx_description _entity.src_method _pdbx_database_status.process_site _pdbx_entity_nonpoly.name _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.ndb_seq_num _struct_ref_seq_dif.details _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession LArapa a-L-arabinopyranose a-L-Arap Ara LArapb b-L-arabinopyranose b-L-Arap Ara Y BNL 1991-11-15 REL ARA alpha-L-arabinopyranose ARB beta-L-arabinopyranose HOH water SINCE IT HAS BEEN SHOWN THAT ABP CAN BIND EITHER ALPHA OR BETA ANOMERS OF L-ARABINOSE WITH ALMOST EQUAL AFFINITY, BOTH ARE PROVIDED IN THE SAME SITE. ARA 307 2 ARA ARA 307 A ARB 308 3 ARB ARB 308 A HOH 309 4 HOH HOH 309 A HOH 310 4 HOH HOH 310 A HOH 311 4 HOH HOH 311 A HOH 312 4 HOH HOH 312 A HOH 313 4 HOH HOH 313 A HOH 314 4 HOH HOH 314 A HOH 315 4 HOH HOH 315 A HOH 316 4 HOH HOH 316 A HOH 317 4 HOH HOH 317 A HOH 318 4 HOH HOH 318 A HOH 319 4 HOH HOH 319 A HOH 320 4 HOH HOH 320 A HOH 321 4 HOH HOH 321 A HOH 322 4 HOH HOH 322 A HOH 323 4 HOH HOH 323 A HOH 324 4 HOH HOH 324 A HOH 325 4 HOH HOH 325 A HOH 326 4 HOH HOH 326 A HOH 327 4 HOH HOH 327 A HOH 328 4 HOH HOH 328 A HOH 329 4 HOH HOH 329 A HOH 330 4 HOH HOH 330 A HOH 331 4 HOH HOH 331 A HOH 332 4 HOH HOH 332 A HOH 333 4 HOH HOH 333 A HOH 334 4 HOH HOH 334 A HOH 335 4 HOH HOH 335 A HOH 336 4 HOH HOH 336 A HOH 337 4 HOH HOH 337 A HOH 338 4 HOH HOH 338 A HOH 339 4 HOH HOH 339 A HOH 340 4 HOH HOH 340 A HOH 341 4 HOH HOH 341 A HOH 342 4 HOH HOH 342 A HOH 343 4 HOH HOH 343 A HOH 344 4 HOH HOH 344 A HOH 345 4 HOH HOH 345 A HOH 346 4 HOH HOH 346 A HOH 347 4 HOH HOH 347 A HOH 348 4 HOH HOH 348 A HOH 349 4 HOH HOH 349 A HOH 350 4 HOH HOH 350 A HOH 351 4 HOH HOH 351 A HOH 352 4 HOH HOH 352 A HOH 353 4 HOH HOH 353 A HOH 354 4 HOH HOH 354 A HOH 355 4 HOH HOH 355 A HOH 356 4 HOH HOH 356 A HOH 357 4 HOH HOH 357 A HOH 358 4 HOH HOH 358 A HOH 359 4 HOH HOH 359 A HOH 360 4 HOH HOH 360 A HOH 361 4 HOH HOH 361 A HOH 362 4 HOH HOH 362 A HOH 363 4 HOH HOH 363 A HOH 364 4 HOH HOH 364 A HOH 365 4 HOH HOH 365 A HOH 366 4 HOH HOH 366 A HOH 367 4 HOH HOH 367 A HOH 368 4 HOH HOH 368 A HOH 369 4 HOH HOH 369 A HOH 370 4 HOH HOH 370 A HOH 371 4 HOH HOH 371 A HOH 372 4 HOH HOH 372 A HOH 373 4 HOH HOH 373 A HOH 374 4 HOH HOH 374 A HOH 375 4 HOH HOH 375 A HOH 376 4 HOH HOH 376 A HOH 377 4 HOH HOH 377 A HOH 378 4 HOH HOH 378 A HOH 379 4 HOH HOH 379 A HOH 380 4 HOH HOH 380 A HOH 381 4 HOH HOH 381 A HOH 382 4 HOH HOH 382 A HOH 383 4 HOH HOH 383 A HOH 384 4 HOH HOH 384 A HOH 385 4 HOH HOH 385 A HOH 386 4 HOH HOH 386 A HOH 387 4 HOH HOH 387 A HOH 388 4 HOH HOH 388 A HOH 389 4 HOH HOH 389 A HOH 390 4 HOH HOH 390 A HOH 391 4 HOH HOH 391 A HOH 392 4 HOH HOH 392 A HOH 393 4 HOH HOH 393 A HOH 394 4 HOH HOH 394 A HOH 395 4 HOH HOH 395 A HOH 396 4 HOH HOH 396 A HOH 397 4 HOH HOH 397 A HOH 398 4 HOH HOH 398 A HOH 399 4 HOH HOH 399 A HOH 400 4 HOH HOH 400 A HOH 401 4 HOH HOH 401 A HOH 402 4 HOH HOH 402 A HOH 403 4 HOH HOH 403 A HOH 404 4 HOH HOH 404 A HOH 405 4 HOH HOH 405 A HOH 406 4 HOH HOH 406 A HOH 407 4 HOH HOH 407 A HOH 408 4 HOH HOH 408 A HOH 409 4 HOH HOH 409 A HOH 410 4 HOH HOH 410 A HOH 411 4 HOH HOH 411 A HOH 412 4 HOH HOH 412 A HOH 413 4 HOH HOH 413 A HOH 414 4 HOH HOH 414 A HOH 415 4 HOH HOH 415 A HOH 416 4 HOH HOH 416 A HOH 417 4 HOH HOH 417 A HOH 418 4 HOH HOH 418 A HOH 419 4 HOH HOH 419 A HOH 420 4 HOH HOH 420 A HOH 421 4 HOH HOH 421 A HOH 422 4 HOH HOH 422 A HOH 423 4 HOH HOH 423 A HOH 424 4 HOH HOH 424 A HOH 425 4 HOH HOH 425 A HOH 426 4 HOH HOH 426 A HOH 427 4 HOH HOH 427 A HOH 428 4 HOH HOH 428 A HOH 429 4 HOH HOH 429 A HOH 430 4 HOH HOH 430 A HOH 431 4 HOH HOH 431 A HOH 432 4 HOH HOH 432 A HOH 433 4 HOH HOH 433 A HOH 434 4 HOH HOH 434 A HOH 435 4 HOH HOH 435 A HOH 436 4 HOH HOH 436 A HOH 437 4 HOH HOH 437 A HOH 438 4 HOH HOH 438 A HOH 439 4 HOH HOH 439 A HOH 440 4 HOH HOH 440 A HOH 441 4 HOH HOH 441 A HOH 442 4 HOH HOH 442 A HOH 443 4 HOH HOH 443 A HOH 444 4 HOH HOH 444 A HOH 445 4 HOH HOH 445 A HOH 446 4 HOH HOH 446 A HOH 447 4 HOH HOH 447 A HOH 448 4 HOH HOH 448 A HOH 449 4 HOH HOH 449 A HOH 450 4 HOH HOH 450 A HOH 451 4 HOH HOH 451 A HOH 452 4 HOH HOH 452 A HOH 453 4 HOH HOH 453 A HOH 454 4 HOH HOH 454 A HOH 455 4 HOH HOH 455 A HOH 456 4 HOH HOH 456 A HOH 457 4 HOH HOH 457 A HOH 458 4 HOH HOH 458 A HOH 459 4 HOH HOH 459 A HOH 460 4 HOH HOH 460 A HOH 461 4 HOH HOH 461 A HOH 462 4 HOH HOH 462 A n 1 1 A ASN 2 n 2 ASN 2 A LEU 3 n 3 LEU 3 A LYS 4 n 4 LYS 4 A LEU 5 n 5 LEU 5 A GLY 6 n 6 GLY 6 A PHE 7 n 7 PHE 7 A LEU 8 n 8 LEU 8 A VAL 9 n 9 VAL 9 A LYS 10 n 10 LYS 10 A GLN 11 n 11 GLN 11 A PRO 12 n 12 PRO 12 A GLU 13 n 13 GLU 13 A GLU 14 n 14 GLU 14 A PRO 15 n 15 PRO 15 A TRP 16 n 16 TRP 16 A PHE 17 n 17 PHE 17 A GLN 18 n 18 GLN 18 A THR 19 n 19 THR 19 A GLU 20 n 20 GLU 20 A TRP 21 n 21 TRP 21 A LYS 22 n 22 LYS 22 A PHE 23 n 23 PHE 23 A ALA 24 n 24 ALA 24 A ASP 25 n 25 ASP 25 A LYS 26 n 26 LYS 26 A ALA 27 n 27 ALA 27 A GLY 28 n 28 GLY 28 A LYS 29 n 29 LYS 29 A ASP 30 n 30 ASP 30 A LEU 31 n 31 LEU 31 A GLY 32 n 32 GLY 32 A PHE 33 n 33 PHE 33 A GLU 34 n 34 GLU 34 A VAL 35 n 35 VAL 35 A ILE 36 n 36 ILE 36 A LYS 37 n 37 LYS 37 A ILE 38 n 38 ILE 38 A ALA 39 n 39 ALA 39 A VAL 40 n 40 VAL 40 A PRO 41 n 41 PRO 41 A ASP 42 n 42 ASP 42 A GLY 43 n 43 GLY 43 A GLU 44 n 44 GLU 44 A LYS 45 n 45 LYS 45 A THR 46 n 46 THR 46 A LEU 47 n 47 LEU 47 A ASN 48 n 48 ASN 48 A ALA 49 n 49 ALA 49 A ILE 50 n 50 ILE 50 A ASP 51 n 51 ASP 51 A SER 52 n 52 SER 52 A LEU 53 n 53 LEU 53 A ALA 54 n 54 ALA 54 A ALA 55 n 55 ALA 55 A SER 56 n 56 SER 56 A GLY 57 n 57 GLY 57 A ALA 58 n 58 ALA 58 A LYS 59 n 59 LYS 59 A GLY 60 n 60 GLY 60 A PHE 61 n 61 PHE 61 A VAL 62 n 62 VAL 62 A ILE 63 n 63 ILE 63 A CYS 64 n 64 CYS 64 A THR 65 n 65 THR 65 A PRO 66 n 66 PRO 66 A ASP 67 n 67 ASP 67 A PRO 68 n 68 PRO 68 A LYS 69 n 69 LYS 69 A LEU 70 n 70 LEU 70 A GLY 71 n 71 GLY 71 A SER 72 n 72 SER 72 A ALA 73 n 73 ALA 73 A ILE 74 n 74 ILE 74 A VAL 75 n 75 VAL 75 A ALA 76 n 76 ALA 76 A LYS 77 n 77 LYS 77 A ALA 78 n 78 ALA 78 A ARG 79 n 79 ARG 79 A GLY 80 n 80 GLY 80 A TYR 81 n 81 TYR 81 A ASP 82 n 82 ASP 82 A MET 83 n 83 MET 83 A LYS 84 n 84 LYS 84 A VAL 85 n 85 VAL 85 A ILE 86 n 86 ILE 86 A ALA 87 n 87 ALA 87 A VAL 88 n 88 VAL 88 A ASP 89 n 89 ASP 89 A ASP 90 n 90 ASP 90 A GLN 91 n 91 GLN 91 A PHE 92 n 92 PHE 92 A VAL 93 n 93 VAL 93 A ASN 94 n 94 ASN 94 A ALA 95 n 95 ALA 95 A LYS 96 n 96 LYS 96 A GLY 97 n 97 GLY 97 A LYS 98 n 98 LYS 98 A PRO 99 n 99 PRO 99 A MET 100 n 100 MET 100 A ASP 101 n 101 ASP 101 A THR 102 n 102 THR 102 A VAL 103 n 103 VAL 103 A PRO 104 n 104 PRO 104 A LEU 105 n 105 LEU 105 A VAL 106 n 106 VAL 106 A MET 107 n 107 MET 107 A MET 108 n 108 MET 108 A ALA 109 n 109 ALA 109 A ALA 110 n 110 ALA 110 A THR 111 n 111 THR 111 A LYS 112 n 112 LYS 112 A ILE 113 n 113 ILE 113 A GLY 114 n 114 GLY 114 A GLU 115 n 115 GLU 115 A ARG 116 n 116 ARG 116 A GLN 117 n 117 GLN 117 A GLY 118 n 118 GLY 118 A GLN 119 n 119 GLN 119 A GLU 120 n 120 GLU 120 A LEU 121 n 121 LEU 121 A TYR 122 n 122 TYR 122 A LYS 123 n 123 LYS 123 A GLU 124 n 124 GLU 124 A MET 125 n 125 MET 125 A GLN 126 n 126 GLN 126 A LYS 127 n 127 LYS 127 A ARG 128 n 128 ARG 128 A GLY 129 n 129 GLY 129 A TRP 130 n 130 TRP 130 A ASP 131 n 131 ASP 131 A VAL 132 n 132 VAL 132 A LYS 133 n 133 LYS 133 A GLU 134 n 134 GLU 134 A SER 135 n 135 SER 135 A ALA 136 n 136 ALA 136 A VAL 137 n 137 VAL 137 A MET 138 n 138 MET 138 A ALA 139 n 139 ALA 139 A ILE 140 n 140 ILE 140 A THR 141 n 141 THR 141 A ALA 142 n 142 ALA 142 A ASN 143 n 143 ASN 143 A GLU 144 n 144 GLU 144 A LEU 145 n 145 LEU 145 A ASP 146 n 146 ASP 146 A THR 147 n 147 THR 147 A ALA 148 n 148 ALA 148 A ARG 149 n 149 ARG 149 A ARG 150 n 150 ARG 150 A ARG 151 n 151 ARG 151 A THR 152 n 152 THR 152 A THR 153 n 153 THR 153 A GLY 154 n 154 GLY 154 A SER 155 n 155 SER 155 A MET 156 n 156 MET 156 A ASP 157 n 157 ASP 157 A ALA 158 n 158 ALA 158 A LEU 159 n 159 LEU 159 A LYS 160 n 160 LYS 160 A ALA 161 n 161 ALA 161 A ALA 162 n 162 ALA 162 A GLY 163 n 163 GLY 163 A PHE 164 n 164 PHE 164 A PRO 165 n 165 PRO 165 A GLU 166 n 166 GLU 166 A LYS 167 n 167 LYS 167 A GLN 168 n 168 GLN 168 A ILE 169 n 169 ILE 169 A TYR 170 n 170 TYR 170 A GLN 171 n 171 GLN 171 A VAL 172 n 172 VAL 172 A PRO 173 n 173 PRO 173 A THR 174 n 174 THR 174 A LYS 175 n 175 LYS 175 A SER 176 n 176 SER 176 A ASN 177 n 177 ASN 177 A ASP 178 n 178 ASP 178 A ILE 179 n 179 ILE 179 A PRO 180 n 180 PRO 180 A GLY 181 n 181 GLY 181 A ALA 182 n 182 ALA 182 A PHE 183 n 183 PHE 183 A ASP 184 n 184 ASP 184 A ALA 185 n 185 ALA 185 A ALA 186 n 186 ALA 186 A ASN 187 n 187 ASN 187 A SER 188 n 188 SER 188 A MET 189 n 189 MET 189 A LEU 190 n 190 LEU 190 A VAL 191 n 191 VAL 191 A GLN 192 n 192 GLN 192 A HIS 193 n 193 HIS 193 A PRO 194 n 194 PRO 194 A GLU 195 n 195 GLU 195 A VAL 196 n 196 VAL 196 A LYS 197 n 197 LYS 197 A HIS 198 n 198 HIS 198 A TRP 199 n 199 TRP 199 A LEU 200 n 200 LEU 200 A ILE 201 n 201 ILE 201 A VAL 202 n 202 VAL 202 A GLY 203 n 203 GLY 203 A MET 204 n 204 MET 204 A ASN 205 n 205 ASN 205 A ASP 206 n 206 ASP 206 A SER 207 n 207 SER 207 A THR 208 n 208 THR 208 A VAL 209 n 209 VAL 209 A LEU 210 n 210 LEU 210 A GLY 211 n 211 GLY 211 A GLY 212 n 212 GLY 212 A VAL 213 n 213 VAL 213 A ARG 214 n 214 ARG 214 A ALA 215 n 215 ALA 215 A THR 216 n 216 THR 216 A GLU 217 n 217 GLU 217 A GLY 218 n 218 GLY 218 A GLN 219 n 219 GLN 219 A GLY 220 n 220 GLY 220 A PHE 221 n 221 PHE 221 A LYS 222 n 222 LYS 222 A ALA 223 n 223 ALA 223 A ALA 224 n 224 ALA 224 A ASP 225 n 225 ASP 225 A ILE 226 n 226 ILE 226 A ILE 227 n 227 ILE 227 A GLY 228 n 228 GLY 228 A ILE 229 n 229 ILE 229 A GLY 230 n 230 GLY 230 A ILE 231 n 231 ILE 231 A ASN 232 n 232 ASN 232 A GLY 233 n 233 GLY 233 A VAL 234 n 234 VAL 234 A ASP 235 n 235 ASP 235 A ALA 236 n 236 ALA 236 A VAL 237 n 237 VAL 237 A SER 238 n 238 SER 238 A GLU 239 n 239 GLU 239 A LEU 240 n 240 LEU 240 A SER 241 n 241 SER 241 A LYS 242 n 242 LYS 242 A ALA 243 n 243 ALA 243 A GLN 244 n 244 GLN 244 A ALA 245 n 245 ALA 245 A THR 246 n 246 THR 246 A GLY 247 n 247 GLY 247 A PHE 248 n 248 PHE 248 A TYR 249 n 249 TYR 249 A GLY 250 n 250 GLY 250 A SER 251 n 251 SER 251 A LEU 252 n 252 LEU 252 A LEU 253 n 253 LEU 253 A GLY 254 n 254 GLY 254 A SER 255 n 255 SER 255 A PRO 256 n 256 PRO 256 A ASP 257 n 257 ASP 257 A VAL 258 n 258 VAL 258 A HIS 259 n 259 HIS 259 A GLY 260 n 260 GLY 260 A TYR 261 n 261 TYR 261 A LYS 262 n 262 LYS 262 A SER 263 n 263 SER 263 A SER 264 n 264 SER 264 A GLU 265 n 265 GLU 265 A MET 266 n 266 MET 266 A LEU 267 n 267 LEU 267 A TYR 268 n 268 TYR 268 A ASN 269 n 269 ASN 269 A TRP 270 n 270 TRP 270 A VAL 271 n 271 VAL 271 A ALA 272 n 272 ALA 272 A LYS 273 n 273 LYS 273 A ASP 274 n 274 ASP 274 A VAL 275 n 275 VAL 275 A GLU 276 n 276 GLU 276 A PRO 277 n 277 PRO 277 A PRO 278 n 278 PRO 278 A LYS 279 n 279 LYS 279 A PHE 280 n 280 PHE 280 A THR 281 n 281 THR 281 A GLU 282 n 282 GLU 282 A VAL 283 n 283 VAL 283 A THR 284 n 284 THR 284 A ASP 285 n 285 ASP 285 A VAL 286 n 286 VAL 286 A VAL 287 n 287 VAL 287 A LEU 288 n 288 LEU 288 A ILE 289 n 289 ILE 289 A THR 290 n 290 THR 290 A ARG 291 n 291 ARG 291 A ASP 292 n 292 ASP 292 A ASN 293 n 293 ASN 293 A PHE 294 n 294 PHE 294 A LYS 295 n 295 LYS 295 A GLU 296 n 296 GLU 296 A GLU 297 n 297 GLU 297 A LEU 298 n 298 LEU 298 A GLU 299 n 299 GLU 299 A LYS 300 n 300 LYS 300 A LYS 301 n 301 LYS 301 A GLY 302 n 302 GLY 302 A LEU 303 n 303 LEU 303 A GLY 304 n 304 GLY 304 A GLY 305 n 305 GLY 305 A LYS 306 n 306 LYS 306 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ILE 38 A O ILE 38 A N VAL 9 A N VAL 9 A O LYS 4 A O LYS 4 A N GLY 60 A N GLY 60 A O PHE 61 A O PHE 61 A N ILE 86 A N ILE 86 A N ALA 87 A N ALA 87 A O PRO 104 A O PRO 104 A O MET 107 A O MET 107 A N VAL 283 A N VAL 283 A O TYR 170 A O TYR 170 A N ALA 139 A N ALA 139 A O ALA 136 A O ALA 136 A N LEU 200 A N LEU 200 A O TRP 199 A O TRP 199 A N ILE 227 A N ILE 227 A O GLY 228 A O GLY 228 A N GLY 250 A N GLY 250 A O SER 251 A O SER 251 A N ILE 289 A N ILE 289 1 A CB ASN 2 A CB ASN 2 1 Y 1 A CG ASN 2 A CG ASN 2 1 Y 1 A OD1 ASN 2 A OD1 ASN 2 1 Y 1 A ND2 ASN 2 A ND2 ASN 2 1 Y 1 A CB LYS 306 A CB LYS 306 1 Y 1 A CG LYS 306 A CG LYS 306 1 Y 1 A CD LYS 306 A CD LYS 306 1 Y 1 A CE LYS 306 A CE LYS 306 1 Y 1 A NZ LYS 306 A NZ LYS 306 1 Y 1 A GLU 1 A GLU 1 1 Y 1 A A O O HOH HOH 413 443 2.14 1 A ASP 89 10.23 1 A ARG 150 -10.83 1 A HIS 193 -11.49 1 A GLU 296 14.10 1 A GLY 304 -10.39 1 A ARG 79 0.092 SIDE CHAIN 1 A ARG 150 0.132 SIDE CHAIN 1 -13.86 2.10 120.10 106.24 A A A CA C O LYS LYS LYS 306 306 306 N 1 A A C O LYS LYS 306 306 0.121 0.019 1.229 1.350 N 1 A A OD2 O ASP HOH 274 386 2.19 1_555 3_646 1 A ASP 89 80.70 -67.27 1 A ASN 232 138.58 -50.93 1 A LYS 273 -144.03 17.45 1 A ASP 274 36.26 43.31 1 A LEU 303 -108.95 40.46 0.201 1.75 8.00 27480 1 1.75 8.00 154 2487 20 0 2313 0.006 0.005 0.013 0.010 0.015 0.010 1.455 1.000 2.164 1.500 3.715 2.000 5.568 3.000 0.033 0.010 0.091 0.050 refinement PROLSQ A PRO TO GLY MUTATION IN THE HINGE OF THE ARABINOSE-BINDING PROTEIN ENHANCES BINDING AND ALTERS SPECIFICITY: SUGAR-BINDING AND CRYSTALLOGRAPHIC STUDIES 1 N N 2 N N 3 N N 4 N N A TRP 16 A TRP 16 HELX_P A ASP 30 A ASP 30 1 H01 15 A ASP 42 A ASP 42 HELX_P A GLY 57 A GLY 57 1 H02 16 A LEU 70 A LEU 70 HELX_P A TYR 81 A TYR 81 1 H03 12 A ALA 109 A ALA 109 HELX_P A GLY 129 A GLY 129 1 H04 21 A ASP 146 A ASP 146 HELX_P A ALA 161 A ALA 161 1 H05 16 A ASN 177 A ASN 177 HELX_P A GLN 192 A GLN 192 1 H06 16 A ASP 206 A ASP 206 HELX_P A GLY 218 A GLY 218 1 H07 13 A GLY 233 A GLY 233 HELX_P HAS SEGMENTS OF 3/10 HELIX A SER 241 A SER 241 1 H08 9 A ASP 257 A ASP 257 HELX_P A LYS 273 A LYS 273 1 H09 17 A ASN 293 A ASN 293 HELX_P HAS SEGMENTS OF 3/10 HELIX A LYS 301 A LYS 301 1 H10 9 BINDING PROTEINS BINDING PROTEINS ARAF_ECOLI UNP 1 1 P02924 MHKFTKALAAIGLAAVMSQSAMAENLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASG AKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQFVNAKGKPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAV MAITANELDTARRRTTGSMDALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGVRATE GQGFKAADIIGIGINGVDAVSELSKAQATGFYGSLLPSPDVHGYKSSEMLYNWVAKDVEPPKFTEVTDVVLITRDNFKEE LEKKGLGGK 24 329 1BAP 1 306 P02924 A 1 1 306 1 PRO conflict GLY 254 1BAP A P02924 UNP 277 254 6 6 parallel parallel parallel parallel parallel parallel parallel parallel parallel anti-parallel A GLU 34 A GLU 34 A ALA 39 A ALA 39 A LYS 4 A LYS 4 A LYS 10 A LYS 10 A LYS 59 A LYS 59 A CYS 64 A CYS 64 A LYS 84 A LYS 84 A ASP 89 A ASP 89 A PRO 104 A PRO 104 A ALA 109 A ALA 109 A THR 281 A THR 281 A VAL 283 A VAL 283 A TYR 170 A TYR 170 A VAL 172 A VAL 172 A ALA 136 A ALA 136 A THR 141 A THR 141 A TRP 199 A TRP 199 A MET 204 A MET 204 A ASP 225 A ASP 225 A ASN 232 A ASN 232 A GLY 247 A GLY 247 A LEU 253 A LEU 253 A VAL 287 A VAL 287 A ARG 291 A ARG 291 19 P 21 21 21