0.013862
0.008003
0.000000
0.000000
0.016006
0.000000
0.000000
0.000000
0.028935
0.00000
0.00000
0.00000
Owen, D.J.
Mcmahon, H.T.
Evans, P.R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
72.140
72.140
34.560
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
UK
EMBO J.
EMJODG
0897
0261-4189
17
5273
5285
10.1093/emboj/17.18.5273
9736607
Crystal structure of the amphiphysin-2 SH3 domain and its role in the prevention of dynamin ring formation.
1998
10.2210/pdb1bb9/pdb
pdb_00001bb9
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293
1
IMAGE PLATE
1997-04
MARRESEARCH
M
x-ray
1
0.9
1.0
PX9.5
SRS
0.9
SYNCHROTRON
SRS BEAMLINE PX9.5
12879.215
AMPHIPHYSIN 2
SH3 DOMAIN
1
man
polymer
18.015
water
60
nat
water
no
no
MGSSHHHHHHSSGLVPRGSHMATVNGAVEGSTTTGRLDLPPGFMFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQ
DEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
MGSSHHHHHHSSGLVPRGSHMATVNGAVEGSTTTGRLDLPPGFMFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQ
DEGWLMGVKESDWNQHKELEKCRGVFPENFTERVQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Norway rat
Rattus
Escherichia
Escherichia coli
sample
10116
BRAIN
Rattus norvegicus
511693
Escherichia coli BL21
BL21
PLASMID
PET15B
2
2.01
38.95
NATIVE DATA WERE MERGED FROM 2 CRYSTALS, ONE SET TO 2.2 ANGSTROM RESOLUTION COLLECTED ON THE SRS SYNCHROTRON PX9.5, THE OTHER COLLECTED TO 3.5 ANGSTROMS WAS COLLECTED ON A ROTATING ANODE.
VAPOR DIFFUSION
6.0
VAPOUR DIFFUSION, PROTEIN 30MG/ML, RESERVOIR 2.0M AMMONIUM SULFATE, 100MM NA CITRATE PH6.0, PLUS 2MM DTT., vapor diffusion
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
1998-06-17
1
1
2008-03-24
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
Y
BNL
1998-04-29
REL
REL
HOH
water
THIS IS THE SH3 DOMAIN AT THE C-TERMINUS OF AMPHIPHYSIN-2.
THIS DOMAIN BINDS TO THE PROLINE-RICH C-TERMINAL DOMAIN OF
DYNAMIN, AND DISSOCIATES DYNAMIN RINGS.
HOH
1
2
HOH
HOH
95
A
HOH
2
2
HOH
HOH
96
A
HOH
3
2
HOH
HOH
97
A
HOH
4
2
HOH
HOH
98
A
HOH
5
2
HOH
HOH
99
A
HOH
6
2
HOH
HOH
100
A
HOH
7
2
HOH
HOH
101
A
HOH
8
2
HOH
HOH
102
A
HOH
9
2
HOH
HOH
103
A
HOH
10
2
HOH
HOH
104
A
HOH
11
2
HOH
HOH
105
A
HOH
12
2
HOH
HOH
106
A
HOH
13
2
HOH
HOH
107
A
HOH
14
2
HOH
HOH
108
A
HOH
15
2
HOH
HOH
109
A
HOH
16
2
HOH
HOH
110
A
HOH
17
2
HOH
HOH
111
A
HOH
18
2
HOH
HOH
112
A
HOH
19
2
HOH
HOH
113
A
HOH
20
2
HOH
HOH
114
A
HOH
21
2
HOH
HOH
115
A
HOH
22
2
HOH
HOH
116
A
HOH
23
2
HOH
HOH
117
A
HOH
24
2
HOH
HOH
118
A
HOH
25
2
HOH
HOH
119
A
HOH
26
2
HOH
HOH
120
A
HOH
27
2
HOH
HOH
121
A
HOH
28
2
HOH
HOH
122
A
HOH
29
2
HOH
HOH
123
A
HOH
30
2
HOH
HOH
124
A
HOH
31
2
HOH
HOH
125
A
HOH
32
2
HOH
HOH
126
A
HOH
33
2
HOH
HOH
127
A
HOH
34
2
HOH
HOH
128
A
HOH
35
2
HOH
HOH
129
A
HOH
36
2
HOH
HOH
130
A
HOH
37
2
HOH
HOH
131
A
HOH
38
2
HOH
HOH
132
A
HOH
39
2
HOH
HOH
133
A
HOH
40
2
HOH
HOH
134
A
HOH
41
2
HOH
HOH
135
A
HOH
42
2
HOH
HOH
136
A
HOH
43
2
HOH
HOH
137
A
HOH
44
2
HOH
HOH
138
A
HOH
45
2
HOH
HOH
139
A
HOH
46
2
HOH
HOH
140
A
HOH
47
2
HOH
HOH
141
A
HOH
48
2
HOH
HOH
142
A
HOH
49
2
HOH
HOH
143
A
HOH
50
2
HOH
HOH
144
A
HOH
51
2
HOH
HOH
145
A
HOH
52
2
HOH
HOH
146
A
HOH
53
2
HOH
HOH
147
A
HOH
54
2
HOH
HOH
148
A
HOH
55
2
HOH
HOH
149
A
HOH
56
2
HOH
HOH
150
A
HOH
57
2
HOH
HOH
151
A
HOH
58
2
HOH
HOH
152
A
HOH
59
2
HOH
HOH
153
A
HOH
60
2
HOH
HOH
154
A
n
1
-20
A
n
2
-19
A
n
3
-18
A
n
4
-17
A
n
5
-16
A
n
6
-15
A
n
7
-14
A
n
8
-13
A
n
9
-12
A
n
10
-11
A
n
11
-10
A
n
12
-9
A
n
13
-8
A
n
14
-7
A
n
15
-6
A
n
16
-5
A
n
17
-4
A
n
18
-3
A
n
19
-2
A
n
20
-1
A
n
21
0
A
n
22
1
A
n
23
2
A
n
24
3
A
n
25
4
A
n
26
5
A
n
27
6
A
n
28
7
A
n
29
8
A
n
30
9
A
n
31
10
A
n
32
11
A
THR
12
n
33
THR
12
A
THR
13
n
34
THR
13
A
GLY
14
n
35
GLY
14
A
ARG
15
n
36
ARG
15
A
LEU
16
n
37
LEU
16
A
ASP
17
n
38
ASP
17
A
LEU
18
n
39
LEU
18
A
PRO
19
n
40
PRO
19
A
PRO
20
n
41
PRO
20
A
GLY
21
n
42
GLY
21
A
PHE
22
n
43
PHE
22
A
MET
23
n
44
MET
23
A
PHE
24
n
45
PHE
24
A
LYS
25
n
46
LYS
25
A
VAL
26
n
47
VAL
26
A
GLN
27
n
48
GLN
27
A
ALA
28
n
49
ALA
28
A
GLN
29
n
50
GLN
29
A
HIS
30
n
51
HIS
30
A
ASP
31
n
52
ASP
31
A
TYR
32
n
53
TYR
32
A
THR
33
n
54
THR
33
A
ALA
34
n
55
ALA
34
A
THR
35
n
56
THR
35
A
ASP
36
n
57
ASP
36
A
THR
37
n
58
THR
37
A
ASP
38
n
59
ASP
38
A
GLU
39
n
60
GLU
39
A
LEU
40
n
61
LEU
40
A
GLN
41
n
62
GLN
41
A
LEU
42
n
63
LEU
42
A
LYS
43
n
64
LYS
43
A
ALA
44
n
65
ALA
44
A
GLY
45
n
66
GLY
45
A
ASP
46
n
67
ASP
46
A
VAL
47
n
68
VAL
47
A
VAL
48
n
69
VAL
48
A
LEU
49
n
70
LEU
49
A
VAL
50
n
71
VAL
50
A
ILE
51
n
72
ILE
51
A
PRO
52
n
73
PRO
52
A
PHE
53
n
74
PHE
53
A
GLN
54
n
75
GLN
54
A
ASN
55
n
76
ASN
55
A
PRO
56
n
77
PRO
56
A
GLU
57
n
78
GLU
57
A
GLU
58
n
79
GLU
58
A
GLN
59
n
80
GLN
59
A
ASP
60
n
81
ASP
60
A
GLU
61
n
82
GLU
61
A
GLY
62
n
83
GLY
62
A
TRP
63
n
84
TRP
63
A
LEU
64
n
85
LEU
64
A
MET
65
n
86
MET
65
A
GLY
66
n
87
GLY
66
A
VAL
67
n
88
VAL
67
A
LYS
68
n
89
LYS
68
A
GLU
69
n
90
GLU
69
A
SER
70
n
91
SER
70
A
ASP
71
n
92
ASP
71
A
TRP
72
n
93
TRP
72
A
ASN
73
n
94
ASN
73
A
GLN
74
n
95
GLN
74
A
HIS
75
n
96
HIS
75
A
LYS
76
n
97
LYS
76
A
GLU
77
n
98
GLU
77
A
LEU
78
n
99
LEU
78
A
GLU
79
n
100
GLU
79
A
LYS
80
n
101
LYS
80
A
CYS
81
n
102
CYS
81
A
ARG
82
n
103
ARG
82
A
GLY
83
n
104
GLY
83
A
VAL
84
n
105
VAL
84
A
PHE
85
n
106
PHE
85
A
PRO
86
n
107
PRO
86
A
GLU
87
n
108
GLU
87
A
ASN
88
n
109
ASN
88
A
PHE
89
n
110
PHE
89
A
THR
90
n
111
THR
90
A
GLU
91
n
112
GLU
91
A
ARG
92
n
113
ARG
92
A
VAL
93
n
114
VAL
93
A
GLN
94
n
115
GLN
94
A
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
5_555
x-y,-y,-z+2/3
crystal symmetry operation
0.0000000000
0.0000000000
23.0400000000
A
O
GLU
91
A
O
GLU
112
A
N
GLN
27
A
N
GLN
48
A
O
PHE
24
A
O
PHE
45
A
N
VAL
50
A
N
VAL
71
A
O
LEU
49
A
O
LEU
70
A
N
VAL
67
A
N
VAL
88
A
O
LEU
64
A
O
LEU
85
A
N
PHE
85
A
N
PHE
106
1
A
CE
LYS
43
A
CE
LYS
64
1
Y
1
A
NZ
LYS
43
A
NZ
LYS
64
1
Y
1
A
CG
GLU
57
A
CG
GLU
78
1
Y
1
A
CD
GLU
57
A
CD
GLU
78
1
Y
1
A
OE1
GLU
57
A
OE1
GLU
78
1
Y
1
A
OE2
GLU
57
A
OE2
GLU
78
1
Y
1
A
CG
GLU
58
A
CG
GLU
79
1
Y
1
A
CD
GLU
58
A
CD
GLU
79
1
Y
1
A
OE1
GLU
58
A
OE1
GLU
79
1
Y
1
A
OE2
GLU
58
A
OE2
GLU
79
1
Y
1
A
CG
GLU
79
A
CG
GLU
100
1
Y
1
A
CD
GLU
79
A
CD
GLU
100
1
Y
1
A
OE1
GLU
79
A
OE1
GLU
100
1
Y
1
A
OE2
GLU
79
A
OE2
GLU
100
1
Y
1
A
MET
-20
A
MET
1
1
Y
1
A
GLY
-19
A
GLY
2
1
Y
1
A
SER
-18
A
SER
3
1
Y
1
A
SER
-17
A
SER
4
1
Y
1
A
HIS
-16
A
HIS
5
1
Y
1
A
HIS
-15
A
HIS
6
1
Y
1
A
HIS
-14
A
HIS
7
1
Y
1
A
HIS
-13
A
HIS
8
1
Y
1
A
HIS
-12
A
HIS
9
1
Y
1
A
HIS
-11
A
HIS
10
1
Y
1
A
SER
-10
A
SER
11
1
Y
1
A
SER
-9
A
SER
12
1
Y
1
A
GLY
-8
A
GLY
13
1
Y
1
A
LEU
-7
A
LEU
14
1
Y
1
A
VAL
-6
A
VAL
15
1
Y
1
A
PRO
-5
A
PRO
16
1
Y
1
A
ARG
-4
A
ARG
17
1
Y
1
A
GLY
-3
A
GLY
18
1
Y
1
A
SER
-2
A
SER
19
1
Y
1
A
HIS
-1
A
HIS
20
1
Y
1
A
MET
0
A
MET
21
1
Y
1
A
ALA
1
A
ALA
22
1
Y
1
A
THR
2
A
THR
23
1
Y
1
A
VAL
3
A
VAL
24
1
Y
1
A
ASN
4
A
ASN
25
1
Y
1
A
GLY
5
A
GLY
26
1
Y
1
A
ALA
6
A
ALA
27
1
Y
1
A
VAL
7
A
VAL
28
1
Y
1
A
GLU
8
A
GLU
29
1
Y
1
A
GLY
9
A
GLY
30
1
Y
1
A
SER
10
A
SER
31
1
Y
1
A
THR
11
A
THR
32
1
Y
1
A
LEU
42
-12.88
1
A
HIS
75
-10.10
1
5.68
0.90
118.30
123.98
A
A
A
CB
CG
OD1
ASP
ASP
ASP
31
31
31
N
1
-4.73
0.50
120.30
115.57
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
82
82
82
N
1
11.57
1.40
123.60
135.17
A
A
A
CD
NE
CZ
ARG
ARG
ARG
92
92
92
N
1
4.54
0.50
120.30
124.84
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
1
-3.82
0.50
120.30
116.48
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
92
92
92
N
1
15.93
2.50
121.70
137.63
A
A
A
C
N
CA
VAL
GLN
GLN
93
94
94
Y
1
A
THR
13
-100.04
-147.40
1
A
PHE
22
-31.53
131.67
39.
0.264
0.186
2.2
36.
517
5394
10.
99.1
RANDOM
1
THROUGHOUT
0.
SIR
0.24
2.2
36.
60
745
0
0
685
0.012
0.020
0.034
0.040
0.035
0.050
3.126
3.0
4.784
5.0
4.570
4.0
6.757
6.0
0.023
0.02
0.123
0.150
0.182
0.300
0.250
0.300
0.178
0.300
4.8
7.0
19.5
15.0
21.2
20.0
35.
2.2
36.
1BB9
5401
6.
0.0930000
0.0930000
1
4.7
4.2
99.
0.2010000
2.2
2.32
3.4
0.2010000
3.2
99.
phasing
SHARP
refinement
REFMAC
data reduction
MOSFLM
data scaling
CCP4
(SCALA)
CRYSTAL STRUCTURE OF THE SH3 DOMAIN FROM RAT AMPHIPHYSIN 2
1
N
N
2
N
N
A
PRO
56
A
PRO
77
HELX_P
A
GLU
58
A
GLU
79
5
1
3
A
GLU
69
A
GLU
90
HELX_P
A
ASN
73
A
ASN
94
1
2
5
A
LEU
78
A
LEU
99
HELX_P
A
CYS
81
A
CYS
102
1
3
4
A
GLU
87
A
GLU
108
HELX_P
A
PHE
89
A
PHE
110
5
4
3
TRANSFERASE
TRANSFERASE, SH3 DOMAIN
BIN1_RAT
UNP
1
495
O08839
495
588
1BB9
1
94
O08839
A
1
22
115
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
THR
90
A
THR
111
A
VAL
93
A
VAL
114
A
PHE
24
A
PHE
45
A
ALA
28
A
ALA
49
A
VAL
47
A
VAL
68
A
ILE
51
A
ILE
72
A
TRP
63
A
TRP
84
A
LYS
68
A
LYS
89
A
GLY
83
A
GLY
104
A
PRO
86
A
PRO
107
152
P 31 2 1