0.031636
0.000000
0.003996
0.000000
0.018328
0.000000
0.000000
0.000000
0.032182
0.00000
0.00000
0.00000
Wery, J.-P.
Schevitz, R.W.
Clawson, D.K.
Bobbitt, J.L.
Dow, E.R.
Gamboa, G.
Goodsonjunior, T.
Hermann, R.B.
Kramer, R.M.
Mcclure, D.B.
Mihelich, E.D.
Putnam, J.E.
Sharp, J.D.
Stark, D.H.
Teater, C.
Warrick, M.W.
Jones, N.D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
97.20
90.00
31.610
54.560
31.320
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Nature
NATUAS
0006
0028-0836
352
79
82
10.1038/352079a0
2062381
Structure of recombinant human rheumatoid arthritic synovial fluid phospholipase A2 at 2.2 A resolution.
1991
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
264
5768
Structure and Properties of a Human Non-Pancreatic Phospholipase A2
1989
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
13945.012
PHOSPHOLIPASE A2
3.1.1.4
1
man
polymer
18.015
water
87
nat
water
no
no
NLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQ
DSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC
NLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQ
DSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
9606
Homo sapiens
1.92
35.98
pdbx_database_status
software
software
repository
Initial release
Version format compliance
Version format compliance
Database references
Data collection
Other
Refinement description
Data collection
Refinement description
1
0
1993-10-31
1
1
2008-03-24
1
2
2011-07-13
1
3
2012-02-29
1
4
2019-07-17
1
5
2019-08-14
_pdbx_database_status.process_site
_software.classification
_software.classification
Y
BNL
1992-05-04
REL
REL
HOH
water
HOH
200
2
HOH
HOH
200
A
HOH
201
2
HOH
HOH
201
A
HOH
202
2
HOH
HOH
202
A
HOH
203
2
HOH
HOH
203
A
HOH
204
2
HOH
HOH
204
A
HOH
205
2
HOH
HOH
205
A
HOH
206
2
HOH
HOH
206
A
HOH
207
2
HOH
HOH
207
A
HOH
208
2
HOH
HOH
208
A
HOH
209
2
HOH
HOH
209
A
HOH
210
2
HOH
HOH
210
A
HOH
211
2
HOH
HOH
211
A
HOH
212
2
HOH
HOH
212
A
HOH
213
2
HOH
HOH
213
A
HOH
214
2
HOH
HOH
214
A
HOH
215
2
HOH
HOH
215
A
HOH
216
2
HOH
HOH
216
A
HOH
217
2
HOH
HOH
217
A
HOH
218
2
HOH
HOH
218
A
HOH
219
2
HOH
HOH
219
A
HOH
220
2
HOH
HOH
220
A
HOH
221
2
HOH
HOH
221
A
HOH
222
2
HOH
HOH
222
A
HOH
223
2
HOH
HOH
223
A
HOH
224
2
HOH
HOH
224
A
HOH
225
2
HOH
HOH
225
A
HOH
226
2
HOH
HOH
226
A
HOH
227
2
HOH
HOH
227
A
HOH
228
2
HOH
HOH
228
A
HOH
229
2
HOH
HOH
229
A
HOH
230
2
HOH
HOH
230
A
HOH
231
2
HOH
HOH
231
A
HOH
232
2
HOH
HOH
232
A
HOH
233
2
HOH
HOH
233
A
HOH
234
2
HOH
HOH
234
A
HOH
235
2
HOH
HOH
235
A
HOH
236
2
HOH
HOH
236
A
HOH
237
2
HOH
HOH
237
A
HOH
238
2
HOH
HOH
238
A
HOH
239
2
HOH
HOH
239
A
HOH
240
2
HOH
HOH
240
A
HOH
241
2
HOH
HOH
241
A
HOH
242
2
HOH
HOH
242
A
HOH
243
2
HOH
HOH
243
A
HOH
244
2
HOH
HOH
244
A
HOH
245
2
HOH
HOH
245
A
HOH
246
2
HOH
HOH
246
A
HOH
247
2
HOH
HOH
247
A
HOH
248
2
HOH
HOH
248
A
HOH
249
2
HOH
HOH
249
A
HOH
250
2
HOH
HOH
250
A
HOH
251
2
HOH
HOH
251
A
HOH
252
2
HOH
HOH
252
A
HOH
253
2
HOH
HOH
253
A
HOH
254
2
HOH
HOH
254
A
HOH
255
2
HOH
HOH
255
A
HOH
256
2
HOH
HOH
256
A
HOH
257
2
HOH
HOH
257
A
HOH
258
2
HOH
HOH
258
A
HOH
259
2
HOH
HOH
259
A
HOH
260
2
HOH
HOH
260
A
HOH
261
2
HOH
HOH
261
A
HOH
262
2
HOH
HOH
262
A
HOH
263
2
HOH
HOH
263
A
HOH
264
2
HOH
HOH
264
A
HOH
265
2
HOH
HOH
265
A
HOH
266
2
HOH
HOH
266
A
HOH
267
2
HOH
HOH
267
A
HOH
268
2
HOH
HOH
268
A
HOH
269
2
HOH
HOH
269
A
HOH
270
2
HOH
HOH
270
A
HOH
271
2
HOH
HOH
271
A
HOH
272
2
HOH
HOH
272
A
HOH
273
2
HOH
HOH
273
A
HOH
274
2
HOH
HOH
274
A
HOH
275
2
HOH
HOH
275
A
HOH
276
2
HOH
HOH
276
A
HOH
277
2
HOH
HOH
277
A
HOH
278
2
HOH
HOH
278
A
HOH
279
2
HOH
HOH
279
A
HOH
280
2
HOH
HOH
280
A
HOH
281
2
HOH
HOH
281
A
HOH
282
2
HOH
HOH
282
A
HOH
283
2
HOH
HOH
283
A
HOH
284
2
HOH
HOH
284
A
HOH
285
2
HOH
HOH
285
A
HOH
286
2
HOH
HOH
286
A
ASN
1
n
1
ASN
1
A
LEU
2
n
2
LEU
2
A
VAL
3
n
3
VAL
3
A
ASN
4
n
4
ASN
4
A
PHE
5
n
5
PHE
5
A
HIS
6
n
6
HIS
6
A
ARG
7
n
7
ARG
7
A
MET
8
n
8
MET
8
A
ILE
9
n
9
ILE
9
A
LYS
10
n
10
LYS
10
A
LEU
11
n
11
LEU
11
A
THR
12
n
12
THR
12
A
THR
13
n
13
THR
13
A
GLY
14
n
14
GLY
14
A
LYS
15
n
15
LYS
15
A
GLU
16
n
16
GLU
16
A
ALA
17
n
17
ALA
17
A
ALA
18
n
18
ALA
18
A
LEU
19
n
19
LEU
19
A
SER
20
n
20
SER
20
A
TYR
22
n
21
TYR
22
A
GLY
23
n
22
GLY
23
A
PHE
24
n
23
PHE
24
A
TYR
25
n
24
TYR
25
A
GLY
26
n
25
GLY
26
A
CYS
27
n
26
CYS
27
A
HIS
28
n
27
HIS
28
A
CYS
29
n
28
CYS
29
A
GLY
30
n
29
GLY
30
A
VAL
31
n
30
VAL
31
A
GLY
32
n
31
GLY
32
A
GLY
33
n
32
GLY
33
A
ARG
34
n
33
ARG
34
A
GLY
35
n
34
GLY
35
A
SER
36
n
35
SER
36
A
PRO
37
n
36
PRO
37
A
LYS
38
n
37
LYS
38
A
ASP
39
n
38
ASP
39
A
ALA
40
n
39
ALA
40
A
THR
41
n
40
THR
41
A
ASP
42
n
41
ASP
42
A
ARG
43
n
42
ARG
43
A
CYS
44
n
43
CYS
44
A
CYS
45
n
44
CYS
45
A
VAL
46
n
45
VAL
46
A
THR
47
n
46
THR
47
A
HIS
48
n
47
HIS
48
A
ASP
49
n
48
ASP
49
A
CYS
50
n
49
CYS
50
A
CYS
51
n
50
CYS
51
A
TYR
52
n
51
TYR
52
A
LYS
53
n
52
LYS
53
A
ARG
54
n
53
ARG
54
A
LEU
55
n
54
LEU
55
A
GLU
56
n
55
GLU
56
A
LYS
57
n
56
LYS
57
A
ARG
58
n
57
ARG
58
A
GLY
59
n
58
GLY
59
A
CYS
61
n
59
CYS
61
A
GLY
67
n
60
GLY
67
A
THR
68
n
61
THR
68
A
LYS
69
n
62
LYS
69
A
PHE
70
n
63
PHE
70
A
LEU
71
n
64
LEU
71
A
SER
72
n
65
SER
72
A
TYR
73
n
66
TYR
73
A
LYS
74
n
67
LYS
74
A
PHE
75
n
68
PHE
75
A
SER
76
n
69
SER
76
A
ASN
77
n
70
ASN
77
A
SER
78
n
71
SER
78
A
GLY
79
n
72
GLY
79
A
SER
80
n
73
SER
80
A
ARG
81
n
74
ARG
81
A
ILE
82
n
75
ILE
82
A
THR
83
n
76
THR
83
A
CYS
84
n
77
CYS
84
A
ALA
85
n
78
ALA
85
A
LYS
86
n
79
LYS
86
A
GLN
88
n
80
GLN
88
A
ASP
89
n
81
ASP
89
A
SER
90
n
82
SER
90
A
CYS
91
n
83
CYS
91
A
ARG
92
n
84
ARG
92
A
SER
93
n
85
SER
93
A
GLN
94
n
86
GLN
94
A
LEU
95
n
87
LEU
95
A
CYS
96
n
88
CYS
96
A
GLU
97
n
89
GLU
97
A
CYS
98
n
90
CYS
98
A
ASP
99
n
91
ASP
99
A
LYS
100
n
92
LYS
100
A
ALA
101
n
93
ALA
101
A
ALA
102
n
94
ALA
102
A
ALA
103
n
95
ALA
103
A
THR
104
n
96
THR
104
A
CYS
105
n
97
CYS
105
A
PHE
106
n
98
PHE
106
A
ALA
107
n
99
ALA
107
A
ARG
108
n
100
ARG
108
A
ASN
109
n
101
ASN
109
A
LYS
110
n
102
LYS
110
A
THR
111
n
103
THR
111
A
THR
112
n
104
THR
112
A
TYR
113
n
105
TYR
113
A
ASN
114
n
106
ASN
114
A
LYS
115
n
107
LYS
115
A
LYS
116
n
108
LYS
116
A
TYR
117
n
109
TYR
117
A
GLN
118
n
110
GLN
118
A
TYR
119
n
111
TYR
119
A
TYR
120
n
112
TYR
120
A
SER
121
n
113
SER
121
A
ASN
122
n
114
ASN
122
A
LYS
123
n
115
LYS
123
A
HIS
124
n
116
HIS
124
A
CYS
125
n
117
CYS
125
A
ARG
126
n
118
ARG
126
A
GLY
127
n
119
GLY
127
A
SER
128
n
120
SER
128
A
THR
129
n
121
THR
129
A
PRO
130
n
122
PRO
130
A
ARG
131
n
123
ARG
131
A
CYS
132
n
124
CYS
132
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
O
OG
GLN
SER
88
93
2.07
1
A
A
O
N
ASN
HIS
122
124
2.16
1
-4.26
0.50
120.30
116.04
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
43
43
43
N
1
5.95
0.50
120.30
126.25
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
43
43
43
N
1
7.84
1.10
114.20
122.04
A
A
A
CA
CB
SG
CYS
CYS
CYS
44
44
44
N
1
5.91
0.90
118.30
124.21
A
A
A
CB
CG
OD1
ASP
ASP
ASP
49
49
49
N
1
10.73
1.40
123.60
134.33
A
A
A
CD
NE
CZ
ARG
ARG
ARG
58
58
58
N
1
4.32
0.50
120.30
124.62
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
58
58
58
N
1
6.18
0.50
120.30
126.48
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
81
81
81
N
1
16.65
2.60
111.60
128.25
A
A
A
CB
CG
CD
GLN
GLN
GLN
88
88
88
N
1
6.65
0.90
118.30
124.95
A
A
A
CB
CG
OD1
ASP
ASP
ASP
89
89
89
N
1
3.89
0.50
120.30
124.19
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
1
-4.05
0.50
120.30
116.25
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
92
92
92
N
1
-5.37
0.50
120.30
114.93
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
108
108
108
N
1
10.77
1.20
111.50
122.27
A
A
A
CB
CA
C
CYS
CYS
CYS
125
125
125
N
1
A
GLU
16
-56.06
95.65
1
A
ASP
39
-160.74
-164.99
1
A
LEU
55
-68.93
34.40
1
A
LYS
57
166.17
-178.36
1
A
CYS
61
103.32
74.40
1
A
THR
68
-128.43
-95.76
1
A
SER
78
177.39
-159.35
1
A
SER
80
-141.01
10.58
1
A
ARG
81
83.72
-125.94
1
A
ALA
85
-77.80
-142.50
1
A
LYS
86
-0.38
-130.18
1
A
GLN
88
-158.17
-45.11
1
A
ASP
89
-11.62
135.69
1
A
ASN
109
-94.81
40.55
1
A
LYS
123
-29.73
-23.21
1
A
HIS
124
-165.51
67.37
1
A
PRO
130
-56.34
106.93
1
A
ARG
131
-39.13
134.99
0.178
0.178
2.2
6.0
4114
1
0.0
2.2
6.0
87
1053
0
0
966
0.016
1.636
2.000
2.555
2.500
2.657
2.500
3.835
3.500
model building
X-PLOR
refinement
PROLSQ
refinement
X-PLOR
phasing
X-PLOR
PHOSPHOLIPASE A2 (PHOSPHATIDYLCHOLINE 2-ACYLHYDROLASE) (E.C.3.1.1.4)
STRUCTURE OF RECOMBINANT HUMAN RHEUMATOID ARTHRITIC SYNOVIAL FLUID PHOSPHOLIPASE A2 AT 2.2 ANGSTROMS RESOLUTION
1
N
N
2
N
N
A
ASN
1
A
ASN
1
HELX_P
A
THR
13
A
THR
13
1
H1
13
A
ALA
17
A
ALA
17
HELX_P
A
SER
20
A
SER
20
1
H2
4
A
ALA
40
A
ALA
39
HELX_P
A
ARG
54
A
ARG
53
1
H3
15
A
SER
90
A
SER
82
HELX_P
A
ARG
108
A
ARG
100
1
H4
19
disulf
2.085
A
CYS
27
A
SG
CYS
26
1_555
A
CYS
125
A
SG
CYS
117
1_555
disulf
2.100
A
CYS
29
A
SG
CYS
28
1_555
A
CYS
45
A
SG
CYS
44
1_555
disulf
2.151
A
CYS
44
A
SG
CYS
43
1_555
A
CYS
105
A
SG
CYS
97
1_555
disulf
2.105
A
CYS
50
A
SG
CYS
49
1_555
A
CYS
132
A
SG
CYS
124
1_555
disulf
2.179
A
CYS
51
A
SG
CYS
50
1_555
A
CYS
98
A
SG
CYS
90
1_555
disulf
2.104
A
CYS
61
A
SG
CYS
59
1_555
A
CYS
91
A
SG
CYS
83
1_555
disulf
2.100
A
CYS
84
A
SG
CYS
77
1_555
A
CYS
96
A
SG
CYS
88
1_555
HYDROLASE
CARBOXYLIC ESTER HYDROLASE, HYDROLASE
PA2GA_HUMAN
UNP
1
1
P14555
MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCG
TKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC
21
144
1BBC
1
132
P14555
A
1
1
124
2
anti-parallel
A
LYS
74
A
LYS
67
A
SER
78
A
SER
71
A
ARG
81
A
ARG
74
A
ALA
85
A
ALA
78
4
P 1 21 1