1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Agback, P. Baumann, H. Knapp, S. Ladenstein, R. Hard, T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N O N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N O N 58 N P N 59 N O N 60 N O N 61 N O N 62 N C N 63 R C N 64 N O N 65 S C N 66 N O N 67 N C N 68 R C Y 69 N N Y 70 N C Y 71 N N Y 72 N C Y 73 N C N 74 N N Y 75 N N Y 76 N C Y 77 N N Y 78 N C N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N O N 94 N P N 95 N O N 96 N O N 97 N O N 98 N C N 99 R C N 100 N O N 101 S C N 102 N O N 103 N C N 104 R C N 105 N N N 106 N C N 107 N O N 108 N N N 109 N C N 110 N N N 111 N C N 112 N C N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N O N 128 N P N 129 N O N 130 N O N 131 N O N 132 N C N 133 R C N 134 N O N 135 S C N 136 N O N 137 N C N 138 R C Y 139 N N Y 140 N C Y 141 N N Y 142 N C N 143 N C N 144 N O N 145 N N N 146 N C N 147 N N N 148 N N Y 149 N C N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N O N 165 N P N 166 N O N 167 N O N 168 N O N 169 N C N 170 R C N 171 N O N 172 S C N 173 N O N 174 N C N 175 R C N 176 N N N 177 N C N 178 N O N 179 N N N 180 N C N 181 N O N 182 N C N 183 N C N 184 N C N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N N N 201 S C N 202 N C N 203 N O N 204 N C N 205 N C N 206 N C N 207 N O N 208 N N N 209 N O N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N N N 221 S C N 222 N C N 223 N O N 224 N C N 225 N C N 226 N C N 227 N O N 228 N O N 229 N O N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N N N 240 N C N 241 N C N 242 N O N 243 N O N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N N N 250 S C N 251 N C N 252 N O N 253 S C N 254 N C N 255 N C N 256 N C N 257 N O N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N N N 272 S C N 273 N C N 274 N O N 275 N C N 276 N C N 277 N C N 278 N C N 279 N O N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N N N 294 S C N 295 N C N 296 N O N 297 N C N 298 N C N 299 N C N 300 N C N 301 N N N 302 N O N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N N N 319 S C N 320 N C N 321 N O N 322 N C N 323 N C N 324 N S N 325 N C N 326 N O N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N N N 339 S C N 340 N C N 341 N O N 342 N C Y 343 N C Y 344 N C Y 345 N C Y 346 N C Y 347 N C Y 348 N C N 349 N O N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N N N 362 S C N 363 N C N 364 N O N 365 N C N 366 N C N 367 N C N 368 N O N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N N N 379 S C N 380 N C N 381 N O N 382 N C N 383 N O N 384 N O N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N N N 393 S C N 394 N C N 395 N O N 396 R C N 397 N O N 398 N C N 399 N O N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N N N 410 S C N 411 N C N 412 N O N 413 N C Y 414 N C Y 415 N C Y 416 N C Y 417 N N Y 418 N C Y 419 N C Y 420 N C Y 421 N C Y 422 N C N 423 N O N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N N N 437 S C N 438 N C N 439 N O N 440 N C Y 441 N C Y 442 N C Y 443 N C Y 444 N C Y 445 N C Y 446 N C N 447 N O N 448 N O N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N N N 461 S C N 462 N C N 463 N O N 464 N C N 465 N C N 466 N C N 467 N O N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N doub N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing Y 77 N sing Y 78 N sing Y 79 N doub N 80 N sing Y 81 N sing Y 82 N sing Y 83 N doub N 84 N sing Y 85 N doub N 86 N sing N 87 N sing Y 88 N sing Y 89 N doub N 90 N sing Y 91 N sing N 92 N sing N 93 N sing N 94 N doub N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N doub N 118 N sing N 119 N doub N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N doub N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N doub N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing Y 150 N sing Y 151 N sing Y 152 N doub N 153 N sing Y 154 N sing N 155 N sing Y 156 N doub N 157 N doub N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N doub N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N doub N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N doub N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N doub N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N doub N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N doub N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N doub N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N doub N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N doub N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N doub N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N doub N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N doub N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N doub N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N doub N 410 N sing N 411 N sing N 412 N sing N 413 N sing Y 414 N doub Y 415 N sing Y 416 N sing N 417 N sing Y 418 N doub Y 419 N sing Y 420 N sing N 421 N sing Y 422 N sing Y 423 N doub N 424 N sing Y 425 N doub N 426 N sing Y 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N doub N 438 N sing N 439 N sing N 440 N sing N 441 N sing Y 442 N doub Y 443 N sing Y 444 N sing N 445 N sing Y 446 N doub N 447 N sing Y 448 N doub N 449 N sing Y 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N doub N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing US Nat.Struct.Biol. NSBIEW 2024 1072-8368 5 579 584 10.1038/836 9665172 Architecture of Nonspecific Protein-DNA Interactions in the Sso7D-DNA Complex 1998 UK J.Mol.Biol. JMOBAK 0070 0022-2836 247 840 DNA-Binding Surface of the Sso7D Protein from Sulfolobus Solfataricus 1995 US Nat.Struct.Biol. NSBIEW 2024 1072-8368 1 808 Solution Structure and DNA-Binding Properties of a Thermostable Protein from the Archaeon Sulfolobus Solfataricus 1994 10.2210/pdb1bbx/pdb pdb_00001bbx 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 3663.392 DNA (5'-D(*CP*TP*AP*GP*CP*GP*CP*GP*CP*TP*AP*G)-3') 2 syn polymer 7163.403 DNA-BINDING PROTEIN 7D 2 man polymer SSO7D no no (DC)(DT)(DA)(DG)(DC)(DG)(DC)(DG)(DC)(DT)(DA)(DG) CTAGCGCGCTAG A,B polydeoxyribonucleotide no no ATVKFKYKGEEKQVDISKIKKVWRVGKMISFTYDEGGGKTGRGAVSEKDAPKELLQMLEKQKK ATVKFKYKGEEKQVDISKIKKVWRVGKMISFTYDEGGGKTGRGAVSEKDAPKELLQMLEKQKK C,D polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Sulfolobus Escherichia Escherichia coli sample DSM 1616 BL21 2287 Sulfolobus solfataricus 469008 Escherichia coli BL21(DE3) BL21 (DE3) PET15B 0.040 1 19 A 1 B 24 1.510 A_DC1:DG24_B 1 0.256 0.934 -0.010 -0.302 2.643 1 20 A 2 B 23 3.120 A_DT2:DA23_B 2 -2.544 -0.481 0.052 -0.073 -5.284 1 20 A 3 B 22 11.616 A_DA3:DT22_B 3 -9.107 -0.920 -0.092 -0.373 2.352 1 19 A 4 B 21 -1.024 A_DG4:DC21_B 4 -4.874 0.654 0.180 0.040 0.143 1 19 A 5 B 20 5.829 A_DC5:DG20_B 5 -4.134 -0.696 0.291 -0.091 -3.204 1 19 A 6 B 19 5.324 A_DG6:DC19_B 6 -5.927 -0.914 -0.301 -0.324 3.087 1 19 A 7 B 18 5.336 A_DC7:DG18_B 7 -5.902 0.906 -0.297 -0.322 -0.148 1 19 A 8 B 17 5.779 A_DG8:DC17_B 8 -4.029 0.693 0.291 -0.088 -2.527 1 19 A 9 B 16 -1.501 A_DC9:DG16_B 9 -4.781 -0.678 0.186 0.032 5.337 1 20 A 10 B 15 11.587 A_DT10:DA15_B 10 -9.027 0.924 -0.095 -0.373 -2.576 1 20 A 11 B 14 3.114 A_DA11:DT14_B 11 -2.571 0.488 0.052 -0.071 -0.043 1 19 A 12 B 13 1.507 A_DG12:DC13_B 12 0.242 -0.928 -0.010 -0.305 2.689 42.445 A A 1 2 55.958 B B 24 23 3.514 34.906 0.540 0.763 AA_DC1DT2:DA23DG24_BB 1 0.814 -1.305 24.520 -3.319 -0.643 4.381 30.226 A A 2 3 33.172 B B 23 22 4.013 16.398 0.089 1.863 AA_DT2DA3:DT22DA23_BB 2 -1.196 2.419 25.450 -1.082 -0.511 2.763 43.617 A A 3 4 5.950 B B 22 21 2.758 4.411 -0.971 -0.382 AA_DA3DG4:DC21DT22_BB 3 -2.848 3.842 43.315 -0.873 1.075 3.794 22.167 A A 4 5 31.320 B B 21 20 3.643 11.466 -0.923 1.225 AA_DG4DC5:DG20DC21_BB 4 -1.033 2.821 18.976 -2.150 1.921 3.885 28.434 A A 5 6 34.352 B B 20 19 3.874 15.889 1.235 0.978 AA_DC5DG6:DC19DG20_BB 5 3.397 -7.344 23.413 -2.774 -1.496 3.536 34.190 A A 6 7 -10.565 B B 19 18 3.841 -6.179 -0.001 1.398 AA_DG6DC7:DG18DC19_BB 6 -0.034 0.058 33.643 3.488 -0.004 3.886 28.406 A A 7 8 34.259 B B 18 17 3.871 15.836 -1.241 0.978 AA_DC7DG8:DC17DG18_BB 7 -3.407 7.371 23.414 -2.763 1.506 3.785 21.962 A A 8 9 31.769 B B 17 16 3.651 11.508 0.911 1.214 AA_DG8DC9:DG16DC17_BB 8 0.936 -2.584 18.714 -2.283 -1.947 2.760 43.880 A A 9 10 5.793 B B 16 15 2.752 4.320 0.982 -0.378 AA_DC9DT10:DA15DG16_BB 9 2.882 -3.865 43.587 -0.853 -1.083 4.380 30.226 A A 10 11 33.205 B B 15 14 4.013 16.413 -0.089 1.863 AA_DT10DA11:DT14DA15_BB 10 1.202 -2.431 25.441 -1.087 0.511 2.692 42.397 A A 11 12 55.955 B B 14 13 3.517 34.867 -0.538 0.765 AA_DA11DG12:DC13DT14_BB 11 -0.745 1.195 24.494 -3.323 0.651 database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list struct_ref_seq_dif chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Database references Derived calculations Other Data collection 1 0 1998-10-14 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-02-16 1 4 2024-05-22 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_ref_seq_dif.details Y BNL 1998-04-24 REL REL THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY ON 13C, 15N-LABELLED SSO7D AND NON-LABELLED DNA LOWEST RESTRAINT ENERGY 50 1 HNCO CBCA(CO)NNH HNCACB HCCH-TOCSY HCC-TOCSY 13C 15N DOUBLE HALF-FILTERED 2D NOESY 2D NOESY 15N-EDITED 3D NOE-HSQC 13C-EDITED 3D NOE-HSQC 60 mM 5.0 1 atm 323 K REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE. simulated annealing H2O:D2O 9:1 BRUNGER refinement X-PLOR 3.1 structure solution VNMR structure solution ANSIG structure solution XPLOR 500 Varian UNITY C 1 n 1 DC 1 A T 2 n 2 DT 2 A A 3 n 3 DA 3 A G 4 n 4 DG 4 A C 5 n 5 DC 5 A G 6 n 6 DG 6 A C 7 n 7 DC 7 A G 8 n 8 DG 8 A C 9 n 9 DC 9 A T 10 n 10 DT 10 A A 11 n 11 DA 11 A G 12 n 12 DG 12 A C 13 n 1 DC 13 B T 14 n 2 DT 14 B A 15 n 3 DA 15 B G 16 n 4 DG 16 B C 17 n 5 DC 17 B G 18 n 6 DG 18 B C 19 n 7 DC 19 B G 20 n 8 DG 20 B C 21 n 9 DC 21 B T 22 n 10 DT 22 B A 23 n 11 DA 23 B G 24 n 12 DG 24 B ALA 1 n 1 ALA 1 C THR 2 n 2 THR 2 C VAL 3 n 3 VAL 3 C LYS 4 n 4 LYS 4 C PHE 5 n 5 PHE 5 C LYS 6 n 6 LYS 6 C TYR 7 n 7 TYR 7 C LYS 8 n 8 LYS 8 C GLY 9 n 9 GLY 9 C GLU 10 n 10 GLU 10 C GLU 11 n 11 GLU 11 C LYS 12 n 12 LYS 12 C GLN 13 n 13 GLN 13 C VAL 14 n 14 VAL 14 C ASP 15 n 15 ASP 15 C ILE 16 n 16 ILE 16 C SER 17 n 17 SER 17 C LYS 18 n 18 LYS 18 C ILE 19 n 19 ILE 19 C LYS 20 n 20 LYS 20 C LYS 21 n 21 LYS 21 C VAL 22 n 22 VAL 22 C TRP 23 n 23 TRP 23 C ARG 24 n 24 ARG 24 C VAL 25 n 25 VAL 25 C GLY 26 n 26 GLY 26 C LYS 27 n 27 LYS 27 C MET 28 n 28 MET 28 C ILE 29 n 29 ILE 29 C SER 30 n 30 SER 30 C PHE 31 n 31 PHE 31 C THR 32 n 32 THR 32 C TYR 33 n 33 TYR 33 C ASP 34 n 34 ASP 34 C GLU 35 n 35 GLU 35 C GLY 36 n 36 GLY 36 C GLY 37 n 37 GLY 37 C GLY 38 n 38 GLY 38 C LYS 39 n 39 LYS 39 C THR 40 n 40 THR 40 C GLY 41 n 41 GLY 41 C ARG 42 n 42 ARG 42 C GLY 43 n 43 GLY 43 C ALA 44 n 44 ALA 44 C VAL 45 n 45 VAL 45 C SER 46 n 46 SER 46 C GLU 47 n 47 GLU 47 C LYS 48 n 48 LYS 48 C ASP 49 n 49 ASP 49 C ALA 50 n 50 ALA 50 C PRO 51 n 51 PRO 51 C LYS 52 n 52 LYS 52 C GLU 53 n 53 GLU 53 C LEU 54 n 54 LEU 54 C LEU 55 n 55 LEU 55 C GLN 56 n 56 GLN 56 C MET 57 n 57 MET 57 C LEU 58 n 58 LEU 58 C GLU 59 n 59 GLU 59 C LYS 60 n 60 LYS 60 C GLN 61 n 61 GLN 61 C LYS 62 n 62 LYS 62 C LYS 63 n 63 LYS 63 C ALA 1 n 1 ALA 1 D THR 2 n 2 THR 2 D VAL 3 n 3 VAL 3 D LYS 4 n 4 LYS 4 D PHE 5 n 5 PHE 5 D LYS 6 n 6 LYS 6 D TYR 7 n 7 TYR 7 D LYS 8 n 8 LYS 8 D GLY 9 n 9 GLY 9 D GLU 10 n 10 GLU 10 D GLU 11 n 11 GLU 11 D LYS 12 n 12 LYS 12 D GLN 13 n 13 GLN 13 D VAL 14 n 14 VAL 14 D ASP 15 n 15 ASP 15 D ILE 16 n 16 ILE 16 D SER 17 n 17 SER 17 D LYS 18 n 18 LYS 18 D ILE 19 n 19 ILE 19 D LYS 20 n 20 LYS 20 D LYS 21 n 21 LYS 21 D VAL 22 n 22 VAL 22 D TRP 23 n 23 TRP 23 D ARG 24 n 24 ARG 24 D VAL 25 n 25 VAL 25 D GLY 26 n 26 GLY 26 D LYS 27 n 27 LYS 27 D MET 28 n 28 MET 28 D ILE 29 n 29 ILE 29 D SER 30 n 30 SER 30 D PHE 31 n 31 PHE 31 D THR 32 n 32 THR 32 D TYR 33 n 33 TYR 33 D ASP 34 n 34 ASP 34 D GLU 35 n 35 GLU 35 D GLY 36 n 36 GLY 36 D GLY 37 n 37 GLY 37 D GLY 38 n 38 GLY 38 D LYS 39 n 39 LYS 39 D THR 40 n 40 THR 40 D GLY 41 n 41 GLY 41 D ARG 42 n 42 ARG 42 D GLY 43 n 43 GLY 43 D ALA 44 n 44 ALA 44 D VAL 45 n 45 VAL 45 D SER 46 n 46 SER 46 D GLU 47 n 47 GLU 47 D LYS 48 n 48 LYS 48 D ASP 49 n 49 ASP 49 D ALA 50 n 50 ALA 50 D PRO 51 n 51 PRO 51 D LYS 52 n 52 LYS 52 D GLU 53 n 53 GLU 53 D LEU 54 n 54 LEU 54 D LEU 55 n 55 LEU 55 D GLN 56 n 56 GLN 56 D MET 57 n 57 MET 57 D LEU 58 n 58 LEU 58 D GLU 59 n 59 GLU 59 D LYS 60 n 60 LYS 60 D GLN 61 n 61 GLN 61 D LYS 62 n 62 LYS 62 D LYS 63 n 63 LYS 63 D author_defined_assembly 4 tetrameric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 C O VAL 3 C O VAL 3 C N VAL 14 C N VAL 14 D O VAL 3 D O VAL 3 D N VAL 14 D N VAL 14 1 A A H5'' OP2 DT DA 10 11 1.49 1 B B H5'' OP2 DT DA 22 23 1.50 1 C C O H SER ASP 46 49 1.53 1 D D O H SER ASP 46 49 1.54 1 D D O H TYR GLY 7 9 1.56 1 C C O H TYR GLY 7 9 1.56 1 D D O H LEU MET 54 57 1.59 1 C C O H LEU MET 54 57 1.59 1 C ARG 24 0.184 SIDE CHAIN 1 C ARG 42 0.133 SIDE CHAIN 1 D ARG 24 0.183 SIDE CHAIN 1 D ARG 42 0.133 SIDE CHAIN 1 -3.68 0.60 122.90 119.22 A A A C6 C5 C7 DT DT DT 2 2 2 N 1 3.89 0.50 113.80 117.69 A A A N7 C8 N9 DA DA DA 3 3 3 N 1 4.48 0.50 113.10 117.58 A A A N7 C8 N9 DG DG DG 4 4 4 N 1 -2.53 0.40 106.40 103.87 A A A C8 N9 C4 DG DG DG 4 4 4 N 1 4.66 0.50 113.10 117.76 A A A N7 C8 N9 DG DG DG 6 6 6 N 1 4.32 0.50 113.10 117.42 A A A N7 C8 N9 DG DG DG 8 8 8 N 1 -4.31 0.60 122.90 118.59 A A A C6 C5 C7 DT DT DT 10 10 10 N 1 3.98 0.50 113.80 117.78 A A A N7 C8 N9 DA DA DA 11 11 11 N 1 4.65 0.50 113.10 117.75 A A A N7 C8 N9 DG DG DG 12 12 12 N 1 -2.48 0.40 106.40 103.92 A A A C8 N9 C4 DG DG DG 12 12 12 N 1 -3.64 0.60 122.90 119.26 B B B C6 C5 C7 DT DT DT 14 14 14 N 1 3.88 0.50 113.80 117.68 B B B N7 C8 N9 DA DA DA 15 15 15 N 1 4.45 0.50 113.10 117.55 B B B N7 C8 N9 DG DG DG 16 16 16 N 1 -2.52 0.40 106.40 103.88 B B B C8 N9 C4 DG DG DG 16 16 16 N 1 4.64 0.50 113.10 117.74 B B B N7 C8 N9 DG DG DG 18 18 18 N 1 4.31 0.50 113.10 117.41 B B B N7 C8 N9 DG DG DG 20 20 20 N 1 -4.32 0.60 122.90 118.58 B B B C6 C5 C7 DT DT DT 22 22 22 N 1 4.03 0.50 113.80 117.83 B B B N7 C8 N9 DA DA DA 23 23 23 N 1 4.69 0.50 113.10 117.79 B B B N7 C8 N9 DG DG DG 24 24 24 N 1 -2.55 0.40 106.40 103.85 B B B C8 N9 C4 DG DG DG 24 24 24 N 1 C PHE 5 178.05 -156.75 1 C LYS 8 66.96 -59.22 1 C LYS 20 -165.33 -53.36 1 C TRP 23 -111.20 -163.89 1 C ARG 24 -167.46 101.28 1 C MET 28 -174.83 -112.85 1 C SER 30 -50.64 97.75 1 C GLU 35 -155.39 33.92 1 C LYS 39 -95.37 51.88 1 C THR 40 64.01 -70.80 1 C LEU 54 -136.98 -53.08 1 C GLN 61 -91.89 -102.40 1 D PHE 5 178.03 -156.85 1 D LYS 8 66.88 -59.17 1 D LYS 20 -165.46 -53.40 1 D TRP 23 -111.25 -164.06 1 D ARG 24 -167.38 101.38 1 D MET 28 -174.82 -111.72 1 D SER 30 -50.72 97.67 1 D GLU 35 -155.44 33.91 1 D LYS 39 -95.50 52.00 1 D THR 40 63.92 -70.84 1 D LEU 54 -137.02 -53.13 1 D GLN 61 -91.86 -102.55 model building X-PLOR 3.1 refinement X-PLOR 3.1 phasing X-PLOR 3.1 NON-SPECIFIC PROTEIN-DNA INTERACTIONS IN THE SSO7D-DNA COMPLEX, NMR, 1 STRUCTURE 1 N N 1 N N 2 N N 2 N N C ILE 16 C ILE 16 HELX_P C LYS 18 C LYS 18 5 1 3 C LEU 55 C LEU 55 HELX_P C LYS 60 C LYS 60 1 2 6 D ILE 16 D ILE 16 HELX_P D LYS 18 D LYS 18 5 3 3 D LEU 55 D LEU 55 HELX_P D LYS 60 D LYS 60 1 4 6 hydrog WATSON-CRICK A DC 1 A N3 DC 1 1_555 B DG 24 B N1 DG 12 1_555 hydrog WATSON-CRICK A DC 1 A N4 DC 1 1_555 B DG 24 B O6 DG 12 1_555 hydrog WATSON-CRICK A DC 1 A O2 DC 1 1_555 B DG 24 B N2 DG 12 1_555 hydrog WATSON-CRICK A DT 2 A N3 DT 2 1_555 B DA 23 B N1 DA 11 1_555 hydrog WATSON-CRICK A DT 2 A O4 DT 2 1_555 B DA 23 B N6 DA 11 1_555 hydrog WATSON-CRICK A DA 3 A N1 DA 3 1_555 B DT 22 B N3 DT 10 1_555 hydrog WATSON-CRICK A DA 3 A N6 DA 3 1_555 B DT 22 B O4 DT 10 1_555 hydrog WATSON-CRICK A DG 4 A N1 DG 4 1_555 B DC 21 B N3 DC 9 1_555 hydrog WATSON-CRICK A DG 4 A N2 DG 4 1_555 B DC 21 B O2 DC 9 1_555 hydrog WATSON-CRICK A DG 4 A O6 DG 4 1_555 B DC 21 B N4 DC 9 1_555 hydrog WATSON-CRICK A DC 5 A N3 DC 5 1_555 B DG 20 B N1 DG 8 1_555 hydrog WATSON-CRICK A DC 5 A N4 DC 5 1_555 B DG 20 B O6 DG 8 1_555 hydrog WATSON-CRICK A DC 5 A O2 DC 5 1_555 B DG 20 B N2 DG 8 1_555 hydrog WATSON-CRICK A DG 6 A N1 DG 6 1_555 B DC 19 B N3 DC 7 1_555 hydrog WATSON-CRICK A DG 6 A N2 DG 6 1_555 B DC 19 B O2 DC 7 1_555 hydrog WATSON-CRICK A DG 6 A O6 DG 6 1_555 B DC 19 B N4 DC 7 1_555 hydrog WATSON-CRICK A DC 7 A N3 DC 7 1_555 B DG 18 B N1 DG 6 1_555 hydrog WATSON-CRICK A DC 7 A N4 DC 7 1_555 B DG 18 B O6 DG 6 1_555 hydrog WATSON-CRICK A DC 7 A O2 DC 7 1_555 B DG 18 B N2 DG 6 1_555 hydrog WATSON-CRICK A DG 8 A N1 DG 8 1_555 B DC 17 B N3 DC 5 1_555 hydrog WATSON-CRICK A DG 8 A N2 DG 8 1_555 B DC 17 B O2 DC 5 1_555 hydrog WATSON-CRICK A DG 8 A O6 DG 8 1_555 B DC 17 B N4 DC 5 1_555 hydrog WATSON-CRICK A DC 9 A N3 DC 9 1_555 B DG 16 B N1 DG 4 1_555 hydrog WATSON-CRICK A DC 9 A N4 DC 9 1_555 B DG 16 B O6 DG 4 1_555 hydrog WATSON-CRICK A DC 9 A O2 DC 9 1_555 B DG 16 B N2 DG 4 1_555 hydrog WATSON-CRICK A DT 10 A N3 DT 10 1_555 B DA 15 B N1 DA 3 1_555 hydrog WATSON-CRICK A DT 10 A O4 DT 10 1_555 B DA 15 B N6 DA 3 1_555 hydrog WATSON-CRICK A DA 11 A N1 DA 11 1_555 B DT 14 B N3 DT 2 1_555 hydrog WATSON-CRICK A DA 11 A N6 DA 11 1_555 B DT 14 B O4 DT 2 1_555 hydrog WATSON-CRICK A DG 12 A N1 DG 12 1_555 B DC 13 B N3 DC 1 1_555 hydrog WATSON-CRICK A DG 12 A N2 DG 12 1_555 B DC 13 B O2 DC 1 1_555 hydrog WATSON-CRICK A DG 12 A O6 DG 12 1_555 B DC 13 B N4 DC 1 1_555 DNA BINDING PROTEIN/DNA PROTEIN-DNA INTERACTION, NONSPECIFIC PROTEIN-DNA INTERACTION, COMPLEX (DNA-BINDING PROTEIN-DNA), DNA BINDING PROTEIN-DNA COMPLEX DN72_SULSO UNP 2 P39476 1BBX PDB 1 1BBX 1 63 1BBX 1 63 P39476 C 1 1 63 1 63 1BBX 1 63 P39476 D 1 1 63 1 12 1BBX 1 12 1BBX A 2 1 12 13 24 1BBX 13 24 1BBX B 2 1 12 1 GLU conflict GLN 13 1BBX C P39476 UNP 13 13 2 GLU conflict GLN 13 1BBX D P39476 UNP 13 13 2 2 anti-parallel anti-parallel C VAL 3 C VAL 3 C TYR 7 C TYR 7 C GLU 10 C GLU 10 C VAL 14 C VAL 14 D VAL 3 D VAL 3 D TYR 7 D TYR 7 D GLU 10 D GLU 10 D VAL 14 D VAL 14 1 P 1