1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Groft, C.M.
Uljon, S.N.
Wang, R.
Werner, M.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
95
9117
9122
10.1073/pnas.95.16.9117
9689043
Structural homology between the Rap30 DNA-binding domain and linker histone H5: implications for preinitiation complex assembly.
1998
10.2210/pdb1bby/pdb
pdb_00001bby
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
8371.669
RAP30
DNA-BINDING DOMAIN
1
man
polymer
TRANSCRIPTION INITIATION FACTOR RAP30
no
no
RARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVVYLKEILKEIGVQNVKGIHKNTWELKPEYRHYQ
RARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVVYLKEILKEIGVQNVKGIHKNTWELKPEYRHYQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
9606
Homo sapiens
CYTOPLASM
562
Escherichia coli
HMS174 (DE3)
PET11D
database_2
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Other
1
0
1998-11-25
1
1
2008-03-24
1
2
2011-07-13
1
3
2022-02-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
Y
BNL
1998-04-26
REL
STRUCTURE DETERMINED USING STANDARD MULTI-NUCLEAR 3D/4D SPECTROSCOPY
LEAST RESTRAINT AND ANGULAR VIOLATION
150
1
3D/4D HETERONUCLEAR NOESY/ROESY
10mM PHOSPHATE, 50mM NACL
7.2
1
atm
297
K
REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE.
DYNAMICAL SIMULATED ANNEALING
AQUEOUS
BRUNGER
refinement
X-PLOR
3.851
structure solution
X-PLOR
3.851
500
Bruker
DMX500
600
Bruker
DMX600
ARG
175
n
1
ARG
175
A
ALA
176
n
2
ALA
176
A
ARG
177
n
3
ARG
177
A
ALA
178
n
4
ALA
178
A
ASP
179
n
5
ASP
179
A
LYS
180
n
6
LYS
180
A
GLN
181
n
7
GLN
181
A
HIS
182
n
8
HIS
182
A
VAL
183
n
9
VAL
183
A
LEU
184
n
10
LEU
184
A
ASP
185
n
11
ASP
185
A
MET
186
n
12
MET
186
A
LEU
187
n
13
LEU
187
A
PHE
188
n
14
PHE
188
A
SER
189
n
15
SER
189
A
ALA
190
n
16
ALA
190
A
PHE
191
n
17
PHE
191
A
GLU
192
n
18
GLU
192
A
LYS
193
n
19
LYS
193
A
HIS
194
n
20
HIS
194
A
GLN
195
n
21
GLN
195
A
TYR
196
n
22
TYR
196
A
TYR
197
n
23
TYR
197
A
ASN
198
n
24
ASN
198
A
LEU
199
n
25
LEU
199
A
LYS
200
n
26
LYS
200
A
ASP
201
n
27
ASP
201
A
LEU
202
n
28
LEU
202
A
VAL
203
n
29
VAL
203
A
ASP
204
n
30
ASP
204
A
ILE
205
n
31
ILE
205
A
THR
206
n
32
THR
206
A
LYS
207
n
33
LYS
207
A
GLN
208
n
34
GLN
208
A
PRO
209
n
35
PRO
209
A
VAL
210
n
36
VAL
210
A
VAL
211
n
37
VAL
211
A
TYR
212
n
38
TYR
212
A
LEU
213
n
39
LEU
213
A
LYS
214
n
40
LYS
214
A
GLU
215
n
41
GLU
215
A
ILE
216
n
42
ILE
216
A
LEU
217
n
43
LEU
217
A
LYS
218
n
44
LYS
218
A
GLU
219
n
45
GLU
219
A
ILE
220
n
46
ILE
220
A
GLY
221
n
47
GLY
221
A
VAL
222
n
48
VAL
222
A
GLN
223
n
49
GLN
223
A
ASN
224
n
50
ASN
224
A
VAL
225
n
51
VAL
225
A
LYS
226
n
52
LYS
226
A
GLY
227
n
53
GLY
227
A
ILE
228
n
54
ILE
228
A
HIS
229
n
55
HIS
229
A
LYS
230
n
56
LYS
230
A
ASN
231
n
57
ASN
231
A
THR
232
n
58
THR
232
A
TRP
233
n
59
TRP
233
A
GLU
234
n
60
GLU
234
A
LEU
235
n
61
LEU
235
A
LYS
236
n
62
LYS
236
A
PRO
237
n
63
PRO
237
A
GLU
238
n
64
GLU
238
A
TYR
239
n
65
TYR
239
A
ARG
240
n
66
ARG
240
A
HIS
241
n
67
HIS
241
A
TYR
242
n
68
TYR
242
A
GLN
243
n
69
GLN
243
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
HE21
H
GLN
ASN
223
224
1.35
1
A
A
O
H
ASP
VAL
179
183
1.46
1
A
A
O
H
ILE
LYS
220
236
1.51
1
A
A
O
H
LEU
PHE
187
191
1.55
1
A
A
O
H
VAL
LYS
210
214
1.58
1
A
LYS
207
-79.07
30.16
1
A
LYS
226
-127.09
-166.65
1
A
ILE
228
-78.70
21.80
model building
X-PLOR
3.851
refinement
X-PLOR
3.851
phasing
X-PLOR
3.851
DNA-BINDING DOMAIN FROM HUMAN RAP30, NMR, MINIMIZED AVERAGE
1
Y
N
A
ASP
179
A
ASP
5
HELX_P
A
LYS
193
A
LYS
19
1
1
15
A
LEU
199
A
LEU
25
HELX_P
A
ILE
205
A
ILE
31
1
2
7
A
VAL
210
A
VAL
36
HELX_P
A
GLU
219
A
GLU
45
1
3
10
TRANSCRIPTION REGULATION
AVERAGE STRUCTURE TRANSCRIPTION REGULATION, RAP30, DNA-BINDING DOMAIN, TRANSCRIPTION, TRANSCRIPTION REGULATION
T2FB_HUMAN
UNP
1
1
P13984
MAERGELDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIAKTQGRTEVSFTLNEDLANIHDIGGKPASVSAPRE
HPFVLQSVGGQTLTVFTESSSDKLSLEGIVVQRAECRPAASENYMRLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANHQ
YNIEYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVVYLKEILKEIGVQNVKGIHKNTWELKPEYR
HYQGEEKSD
175
243
1BBY
175
243
P13984
A
1
1
69
1
1
1
A
TYR
196
A
TYR
22
A
TYR
197
A
TYR
23
A
ILE
220
A
ILE
46
A
VAL
225
A
VAL
51
A
ASN
231
A
ASN
57
A
GLU
234
A
GLU
60
1
P 1