0.015913 0.000000 0.004273 0.000000 0.017759 0.000000 0.000000 0.000000 0.019544 0.00000 0.00000 0.00000 Schildbach, J.F. Karzai, A.W. Raumann, B.E. Sauer, R.T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 105.03 90.00 62.840 56.310 52.980 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 96 811 817 10.1073/pnas.96.3.811 9927650 Origins of DNA-binding specificity: role of protein contacts with the DNA backbone. 1999 UK Nature NATUAS 0006 0028-0836 367 754 DNA Recognition by Beta-Sheets in the Arc Repressor-Operator Crystal Structure 1994 10.2210/pdb1bdv/pdb pdb_00001bdv 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 200 1 MIRRORS IMAGE PLATE 1996-11-15 RIGAKU RAXIS II NI FILTER SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 6756.387 DNA (5'-D(*TP*AP*TP*AP*GP*TP*AP*GP*AP*GP*TP*GP*CP*TP*TP*CP*TP*AP*TP*CP*AP*T)-3') 1 syn polymer 6743.404 DNA (5'-D(*AP*AP*TP*GP*AP*TP*AP*GP*AP*AP*GP*CP*AP*CP*TP*CP*TP*AP*CP*TP*AP*T)-3') 1 syn polymer 6190.229 PROTEIN (ARC FV10 REPRESSOR) F10V 4 man polymer 18.015 water 34 nat water no no (DT)(DA)(DT)(DA)(DG)(DT)(DA)(DG)(DA)(DG)(DT)(DG)(DC)(DT)(DT)(DC)(DT)(DA)(DT)(DC) (DA)(DT) TATAGTAGAGTGCTTCTATCAT E polydeoxyribonucleotide no no (DA)(DA)(DT)(DG)(DA)(DT)(DA)(DG)(DA)(DA)(DG)(DC)(DA)(DC)(DT)(DC)(DT)(DA)(DC)(DT) (DA)(DT) AATGATAGAAGCACTCTACTAT F polydeoxyribonucleotide no no MKGMSKMPQVNLRWPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGRIGA MKGMSKMPQVNLRWPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGRIGA A,B,C,D polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n P22-like viruses Escherichia sample 10754 Enterobacteria phage P22 562 Escherichia coli PLASMID 1 2.37 48.02 6.5 pH 6.5 PEG 400 1 GLYCEROL 1 CACODYLATE 1 MGCL2 1 COBALTHEXAMMINE 1 5.219 1 20 E 2 F 22 -1.974 E_DA2:DT22_F 1 -16.129 -0.463 0.169 -0.038 -3.931 1 20 E 3 F 21 6.979 E_DT3:DA21_F 2 2.616 -0.190 0.065 0.001 -8.406 1 20 E 4 F 20 3.092 E_DA4:DT20_F 3 -5.457 0.167 -0.616 -0.304 -14.810 1 19 E 5 F 19 4.623 E_DG5:DC19_F 4 6.348 -0.807 -0.535 -0.341 -9.417 1 20 E 6 F 18 -4.766 E_DT6:DA18_F 5 -1.632 -0.488 0.085 -0.104 -1.719 1 20 E 7 F 17 -1.142 E_DA7:DT17_F 6 4.754 -0.469 0.272 -0.140 8.541 1 19 E 8 F 16 2.199 E_DG8:DC16_F 7 1.082 -0.376 0.219 0.113 -1.555 1 20 E 9 F 15 2.647 E_DA9:DT15_F 8 -9.979 0.316 -0.406 0.027 8.263 1 19 E 10 F 14 2.337 E_DG10:DC14_F 9 -7.722 -0.056 0.627 0.075 -1.503 1 20 E 11 F 13 0.877 E_DT11:DA13_F 10 -18.968 -0.260 0.386 -0.100 -5.206 1 19 E 12 F 12 7.141 E_DG12:DC12_F 11 4.869 -0.584 -0.214 0.091 -0.366 1 19 E 13 F 11 0.433 E_DC13:DG11_F 12 -26.434 -0.167 0.473 -0.110 -5.261 1 20 E 14 F 10 -12.579 E_DT14:DA10_F 13 -20.624 -0.597 -0.255 0.008 -9.168 1 20 E 15 F 9 -6.072 E_DT15:DA9_F 14 -4.686 -0.991 -0.237 -0.135 0.173 1 19 E 16 F 8 -1.802 E_DC16:DG8_F 15 -11.631 0.015 -0.087 -0.189 6.030 1 20 E 17 F 7 0.889 E_DT17:DA7_F 16 -2.251 0.464 -0.289 -0.404 6.780 1 20 E 18 F 6 2.339 E_DA18:DT6_F 17 1.863 -0.222 0.347 -0.090 15.004 1 20 E 19 F 5 -9.129 E_DT19:DA5_F 18 -2.675 -0.586 -0.167 -0.134 5.600 1 19 E 20 F 4 2.219 E_DC20:DG4_F 19 -4.463 0.505 -0.506 -0.194 -5.294 1 20 E 21 F 3 7.763 E_DA21:DT3_F 20 -1.439 -0.205 -0.499 -0.297 10.058 1 20 E 22 F 2 11.594 E_DT22:DA2_F 21 -5.997 0.717 -0.219 -0.031 3.397 33.808 E E 2 3 5.765 F F 22 21 3.499 3.348 1.078 -0.987 EE_DA2DT3:DA21DT22_FF 1 0.279 -0.480 33.646 -2.269 -1.807 2.875 29.340 E E 3 4 20.611 F F 21 20 3.411 10.228 -0.551 -0.918 EE_DT3DA4:DT20DA21_FF 2 0.815 -1.643 27.524 -4.000 1.262 3.188 30.532 E E 4 5 12.792 F F 20 19 3.458 6.677 -0.382 -0.978 EE_DA4DG5:DC19DT20_FF 3 -2.396 4.589 29.715 -3.224 0.235 3.024 29.281 E E 5 6 15.260 F F 19 18 3.411 7.623 -0.186 -1.094 EE_DG5DT6:DA18DC19_FF 4 -2.001 4.006 28.223 -3.816 -0.066 2.915 44.117 E E 6 7 -22.887 F F 18 17 3.311 -16.796 0.186 0.470 EE_DT6DA7:DT17DA18_FF 5 0.827 -1.127 40.935 2.190 -0.170 2.832 32.280 E E 7 8 23.029 F F 17 16 3.158 12.481 -0.794 -0.127 EE_DA7DG8:DC16DT17_FF 6 1.667 -3.076 29.783 -2.344 1.710 3.353 32.994 E E 8 9 21.152 F F 16 15 3.650 11.731 0.375 -0.249 EE_DG8DA9:DT15DC16_FF 7 4.189 -7.553 30.613 -2.657 0.131 3.079 35.484 E E 9 10 3.170 F F 15 14 2.867 1.903 -1.089 0.438 EE_DA9DG10:DC14DT15_FF 8 -10.746 17.904 33.815 0.459 0.320 3.268 31.667 E E 10 11 15.475 F F 14 13 3.584 8.342 -0.490 -0.592 EE_DG10DT11:DA13DC14_FF 9 2.274 -4.219 30.493 -2.730 1.347 3.402 38.084 E E 11 12 -9.047 F F 13 12 3.571 -5.881 1.315 1.029 EE_DT11DG12:DC12DA13_FF 10 0.747 -1.148 37.636 2.377 -1.914 3.028 41.136 E E 12 13 -16.626 F F 12 11 3.210 -11.517 -1.571 0.773 EE_DG12DC13:DG11DC12_FF 11 -4.413 6.371 39.320 2.320 1.769 3.190 32.690 E E 13 14 20.730 F F 11 10 3.705 11.432 -0.691 -0.798 EE_DC13DT14:DA10DG11_FF 12 0.911 -1.652 30.663 -3.573 1.399 3.345 34.515 E E 14 15 -4.861 F F 10 9 3.347 -2.880 1.247 0.242 EE_DT14DT15:DA9DA10_FF 13 0.845 -1.427 34.388 0.865 -1.967 3.193 33.767 E E 15 16 10.150 F F 9 8 3.277 5.867 0.069 -0.205 EE_DT15DC16:DG8DA9_FF 14 -0.710 1.228 33.261 -1.299 -0.233 3.177 31.640 E E 16 17 14.867 F F 8 7 3.176 8.010 1.223 0.007 EE_DC16DT17:DA7DG8_FF 15 2.976 -5.523 30.492 -1.454 -1.698 3.345 36.756 E E 17 18 -10.805 F F 7 6 3.449 -6.776 0.017 0.263 EE_DT17DA18:DT6DA7_FF 16 -1.240 1.977 36.127 1.384 -0.204 3.154 23.203 E E 18 19 0.866 F F 6 5 3.182 0.348 0.011 -1.174 EE_DA18DT19:DA5DT6_FF 17 1.986 -4.944 23.117 -3.036 0.638 3.090 41.115 E E 19 20 22.865 F F 5 4 3.643 15.658 0.683 -0.946 EE_DT19DC20:DG4DA5_FF 18 4.090 -5.973 37.923 -3.173 -0.495 3.117 29.490 E E 20 21 17.133 F F 4 3 3.579 8.596 -0.051 -1.087 EE_DC20DA21:DT3DG4_FF 19 -1.606 3.201 28.191 -4.055 -0.258 2.796 34.962 E E 21 22 4.245 F F 3 2 2.834 2.548 -0.180 -0.476 EE_DA21DT22:DA2DT3_FF 20 -0.845 1.408 34.862 -1.123 0.189 struct_conf struct_conf_type database_2 struct_ref_seq_dif pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Derived calculations Database references Refinement description 1 0 1999-01-06 1 1 2008-05-22 1 2 2011-07-13 1 3 2017-11-29 1 4 2021-11-03 1 5 2023-08-02 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details Y NDB 1998-05-11 REL HOH water 1PAR PDB ENTRY 1PAR PDB experimental model HOH 102 4 HOH HOH 102 E HOH 103 4 HOH HOH 103 E HOH 126 4 HOH HOH 126 E HOH 122 4 HOH HOH 122 F HOH 133 4 HOH HOH 133 F HOH 134 4 HOH HOH 134 F HOH 101 4 HOH HOH 101 A HOH 104 4 HOH HOH 104 A HOH 105 4 HOH HOH 105 A HOH 107 4 HOH HOH 107 A HOH 108 4 HOH HOH 108 A HOH 114 4 HOH HOH 114 A HOH 115 4 HOH HOH 115 A HOH 118 4 HOH HOH 118 A HOH 119 4 HOH HOH 119 A HOH 120 4 HOH HOH 120 A HOH 106 4 HOH HOH 106 B HOH 110 4 HOH HOH 110 B HOH 111 4 HOH HOH 111 B HOH 112 4 HOH HOH 112 B HOH 113 4 HOH HOH 113 B HOH 116 4 HOH HOH 116 B HOH 117 4 HOH HOH 117 B HOH 123 4 HOH HOH 123 C HOH 124 4 HOH HOH 124 C HOH 127 4 HOH HOH 127 C HOH 129 4 HOH HOH 129 C HOH 131 4 HOH HOH 131 C HOH 109 4 HOH HOH 109 D HOH 121 4 HOH HOH 121 D HOH 125 4 HOH HOH 125 D HOH 128 4 HOH HOH 128 D HOH 130 4 HOH HOH 130 D HOH 132 4 HOH HOH 132 D T 1 n 1 DT 1 E A 2 n 2 DA 2 E T 3 n 3 DT 3 E A 4 n 4 DA 4 E G 5 n 5 DG 5 E T 6 n 6 DT 6 E A 7 n 7 DA 7 E G 8 n 8 DG 8 E A 9 n 9 DA 9 E G 10 n 10 DG 10 E T 11 n 11 DT 11 E G 12 n 12 DG 12 E C 13 n 13 DC 13 E T 14 n 14 DT 14 E T 15 n 15 DT 15 E C 16 n 16 DC 16 E T 17 n 17 DT 17 E A 18 n 18 DA 18 E T 19 n 19 DT 19 E C 20 n 20 DC 20 E A 21 n 21 DA 21 E T 22 n 22 DT 22 E A 1 n 1 DA 1 F A 2 n 2 DA 2 F T 3 n 3 DT 3 F G 4 n 4 DG 4 F A 5 n 5 DA 5 F T 6 n 6 DT 6 F A 7 n 7 DA 7 F G 8 n 8 DG 8 F A 9 n 9 DA 9 F A 10 n 10 DA 10 F G 11 n 11 DG 11 F C 12 n 12 DC 12 F A 13 n 13 DA 13 F C 14 n 14 DC 14 F T 15 n 15 DT 15 F C 16 n 16 DC 16 F T 17 n 17 DT 17 F A 18 n 18 DA 18 F C 19 n 19 DC 19 F T 20 n 20 DT 20 F A 21 n 21 DA 21 F T 22 n 22 DT 22 F n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A MET 7 n 7 MET 7 A PRO 8 n 8 PRO 8 A GLN 9 n 9 GLN 9 A VAL 10 n 10 VAL 10 A ASN 11 n 11 ASN 11 A LEU 12 n 12 LEU 12 A ARG 13 n 13 ARG 13 A TRP 14 n 14 TRP 14 A PRO 15 n 15 PRO 15 A ARG 16 n 16 ARG 16 A GLU 17 n 17 GLU 17 A VAL 18 n 18 VAL 18 A LEU 19 n 19 LEU 19 A ASP 20 n 20 ASP 20 A LEU 21 n 21 LEU 21 A VAL 22 n 22 VAL 22 A ARG 23 n 23 ARG 23 A LYS 24 n 24 LYS 24 A VAL 25 n 25 VAL 25 A ALA 26 n 26 ALA 26 A GLU 27 n 27 GLU 27 A GLU 28 n 28 GLU 28 A ASN 29 n 29 ASN 29 A GLY 30 n 30 GLY 30 A ARG 31 n 31 ARG 31 A SER 32 n 32 SER 32 A VAL 33 n 33 VAL 33 A ASN 34 n 34 ASN 34 A SER 35 n 35 SER 35 A GLU 36 n 36 GLU 36 A ILE 37 n 37 ILE 37 A TYR 38 n 38 TYR 38 A GLN 39 n 39 GLN 39 A ARG 40 n 40 ARG 40 A VAL 41 n 41 VAL 41 A MET 42 n 42 MET 42 A GLU 43 n 43 GLU 43 A SER 44 n 44 SER 44 A PHE 45 n 45 PHE 45 A LYS 46 n 46 LYS 46 A LYS 47 n 47 LYS 47 A GLU 48 n 48 GLU 48 A GLY 49 n 49 GLY 49 A ARG 50 n 50 ARG 50 A ILE 51 n 51 ILE 51 A GLY 52 n 52 GLY 52 A n 53 53 A MET 1 n 1 MET 1 B LYS 2 n 2 LYS 2 B GLY 3 n 3 GLY 3 B MET 4 n 4 MET 4 B SER 5 n 5 SER 5 B LYS 6 n 6 LYS 6 B MET 7 n 7 MET 7 B PRO 8 n 8 PRO 8 B GLN 9 n 9 GLN 9 B VAL 10 n 10 VAL 10 B ASN 11 n 11 ASN 11 B LEU 12 n 12 LEU 12 B ARG 13 n 13 ARG 13 B TRP 14 n 14 TRP 14 B PRO 15 n 15 PRO 15 B ARG 16 n 16 ARG 16 B GLU 17 n 17 GLU 17 B VAL 18 n 18 VAL 18 B LEU 19 n 19 LEU 19 B ASP 20 n 20 ASP 20 B LEU 21 n 21 LEU 21 B VAL 22 n 22 VAL 22 B ARG 23 n 23 ARG 23 B LYS 24 n 24 LYS 24 B VAL 25 n 25 VAL 25 B ALA 26 n 26 ALA 26 B GLU 27 n 27 GLU 27 B GLU 28 n 28 GLU 28 B ASN 29 n 29 ASN 29 B GLY 30 n 30 GLY 30 B ARG 31 n 31 ARG 31 B SER 32 n 32 SER 32 B VAL 33 n 33 VAL 33 B ASN 34 n 34 ASN 34 B SER 35 n 35 SER 35 B GLU 36 n 36 GLU 36 B ILE 37 n 37 ILE 37 B TYR 38 n 38 TYR 38 B GLN 39 n 39 GLN 39 B ARG 40 n 40 ARG 40 B VAL 41 n 41 VAL 41 B MET 42 n 42 MET 42 B GLU 43 n 43 GLU 43 B SER 44 n 44 SER 44 B PHE 45 n 45 PHE 45 B LYS 46 n 46 LYS 46 B LYS 47 n 47 LYS 47 B GLU 48 n 48 GLU 48 B GLY 49 n 49 GLY 49 B ARG 50 n 50 ARG 50 B ILE 51 n 51 ILE 51 B GLY 52 n 52 GLY 52 B ALA 53 n 53 ALA 53 B n 1 1 C n 2 2 C n 3 3 C n 4 4 C n 5 5 C n 6 6 C MET 7 n 7 MET 7 C PRO 8 n 8 PRO 8 C GLN 9 n 9 GLN 9 C VAL 10 n 10 VAL 10 C ASN 11 n 11 ASN 11 C LEU 12 n 12 LEU 12 C ARG 13 n 13 ARG 13 C TRP 14 n 14 TRP 14 C PRO 15 n 15 PRO 15 C ARG 16 n 16 ARG 16 C GLU 17 n 17 GLU 17 C VAL 18 n 18 VAL 18 C LEU 19 n 19 LEU 19 C ASP 20 n 20 ASP 20 C LEU 21 n 21 LEU 21 C VAL 22 n 22 VAL 22 C ARG 23 n 23 ARG 23 C LYS 24 n 24 LYS 24 C VAL 25 n 25 VAL 25 C ALA 26 n 26 ALA 26 C GLU 27 n 27 GLU 27 C GLU 28 n 28 GLU 28 C ASN 29 n 29 ASN 29 C GLY 30 n 30 GLY 30 C ARG 31 n 31 ARG 31 C SER 32 n 32 SER 32 C VAL 33 n 33 VAL 33 C ASN 34 n 34 ASN 34 C SER 35 n 35 SER 35 C GLU 36 n 36 GLU 36 C ILE 37 n 37 ILE 37 C TYR 38 n 38 TYR 38 C GLN 39 n 39 GLN 39 C ARG 40 n 40 ARG 40 C VAL 41 n 41 VAL 41 C MET 42 n 42 MET 42 C GLU 43 n 43 GLU 43 C SER 44 n 44 SER 44 C PHE 45 n 45 PHE 45 C LYS 46 n 46 LYS 46 C LYS 47 n 47 LYS 47 C GLU 48 n 48 GLU 48 C GLY 49 n 49 GLY 49 C n 50 50 C n 51 51 C n 52 52 C n 53 53 C MET 1 n 1 MET 1 D LYS 2 n 2 LYS 2 D GLY 3 n 3 GLY 3 D MET 4 n 4 MET 4 D SER 5 n 5 SER 5 D LYS 6 n 6 LYS 6 D MET 7 n 7 MET 7 D PRO 8 n 8 PRO 8 D GLN 9 n 9 GLN 9 D VAL 10 n 10 VAL 10 D ASN 11 n 11 ASN 11 D LEU 12 n 12 LEU 12 D ARG 13 n 13 ARG 13 D TRP 14 n 14 TRP 14 D PRO 15 n 15 PRO 15 D ARG 16 n 16 ARG 16 D GLU 17 n 17 GLU 17 D VAL 18 n 18 VAL 18 D LEU 19 n 19 LEU 19 D ASP 20 n 20 ASP 20 D LEU 21 n 21 LEU 21 D VAL 22 n 22 VAL 22 D ARG 23 n 23 ARG 23 D LYS 24 n 24 LYS 24 D VAL 25 n 25 VAL 25 D ALA 26 n 26 ALA 26 D GLU 27 n 27 GLU 27 D GLU 28 n 28 GLU 28 D ASN 29 n 29 ASN 29 D GLY 30 n 30 GLY 30 D ARG 31 n 31 ARG 31 D SER 32 n 32 SER 32 D VAL 33 n 33 VAL 33 D ASN 34 n 34 ASN 34 D SER 35 n 35 SER 35 D GLU 36 n 36 GLU 36 D ILE 37 n 37 ILE 37 D TYR 38 n 38 TYR 38 D GLN 39 n 39 GLN 39 D ARG 40 n 40 ARG 40 D VAL 41 n 41 VAL 41 D MET 42 n 42 MET 42 D GLU 43 n 43 GLU 43 D SER 44 n 44 SER 44 D PHE 45 n 45 PHE 45 D LYS 46 n 46 LYS 46 D LYS 47 n 47 LYS 47 D GLU 48 n 48 GLU 48 D GLY 49 n 49 GLY 49 D ARG 50 n 50 ARG 50 D n 51 51 D n 52 52 D n 53 53 D author_defined_assembly 6 hexameric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 12 C N LEU 12 B O VAL 10 D O VAL 10 C N LEU 12 E N LEU 12 D O VAL 10 F O VAL 10 1 A CG GLU 17 C CG GLU 17 1 Y 1 A CD GLU 17 C CD GLU 17 1 Y 1 A OE1 GLU 17 C OE1 GLU 17 1 Y 1 A OE2 GLU 17 C OE2 GLU 17 1 Y 1 A CG GLU 27 C CG GLU 27 1 Y 1 A CD GLU 27 C CD GLU 27 1 Y 1 A OE1 GLU 27 C OE1 GLU 27 1 Y 1 A OE2 GLU 27 C OE2 GLU 27 1 Y 1 B CG LYS 2 D CG LYS 2 1 Y 1 B CD LYS 2 D CD LYS 2 1 Y 1 B CE LYS 2 D CE LYS 2 1 Y 1 B NZ LYS 2 D NZ LYS 2 1 Y 1 B OG SER 5 D OG SER 5 1 Y 1 B CG LYS 6 D CG LYS 6 1 Y 1 B CD LYS 6 D CD LYS 6 1 Y 1 B CE LYS 6 D CE LYS 6 1 Y 1 B NZ LYS 6 D NZ LYS 6 1 Y 1 B CG ARG 16 D CG ARG 16 1 Y 1 B CD ARG 16 D CD ARG 16 1 Y 1 B NE ARG 16 D NE ARG 16 1 Y 1 B CZ ARG 16 D CZ ARG 16 1 Y 1 B NH1 ARG 16 D NH1 ARG 16 1 Y 1 B NH2 ARG 16 D NH2 ARG 16 1 Y 1 B CG LYS 24 D CG LYS 24 1 Y 1 B CD LYS 24 D CD LYS 24 1 Y 1 B CE LYS 24 D CE LYS 24 1 Y 1 B NZ LYS 24 D NZ LYS 24 1 Y 1 B CG GLU 27 D CG GLU 27 1 Y 1 B CD GLU 27 D CD GLU 27 1 Y 1 B OE1 GLU 27 D OE1 GLU 27 1 Y 1 B OE2 GLU 27 D OE2 GLU 27 1 Y 1 B CG GLU 28 D CG GLU 28 1 Y 1 B CD GLU 28 D CD GLU 28 1 Y 1 B OE1 GLU 28 D OE1 GLU 28 1 Y 1 B OE2 GLU 28 D OE2 GLU 28 1 Y 1 D CG LYS 2 F CG LYS 2 1 Y 1 D CD LYS 2 F CD LYS 2 1 Y 1 D CE LYS 2 F CE LYS 2 1 Y 1 D NZ LYS 2 F NZ LYS 2 1 Y 1 D CG MET 42 F CG MET 42 1 Y 1 D SD MET 42 F SD MET 42 1 Y 1 D CE MET 42 F CE MET 42 1 Y 1 D CG LYS 46 F CG LYS 46 1 Y 1 D CD LYS 46 F CD LYS 46 1 Y 1 D CE LYS 46 F CE LYS 46 1 Y 1 D NZ LYS 46 F NZ LYS 46 1 Y 1 D CG LYS 47 F CG LYS 47 1 Y 1 D CD LYS 47 F CD LYS 47 1 Y 1 D CE LYS 47 F CE LYS 47 1 Y 1 D NZ LYS 47 F NZ LYS 47 1 Y 1 D CG GLU 48 F CG GLU 48 1 Y 1 D CD GLU 48 F CD GLU 48 1 Y 1 D OE1 GLU 48 F OE1 GLU 48 1 Y 1 D OE2 GLU 48 F OE2 GLU 48 1 Y 1 D CG ARG 50 F CG ARG 50 1 Y 1 D CD ARG 50 F CD ARG 50 1 Y 1 D NE ARG 50 F NE ARG 50 1 Y 1 D CZ ARG 50 F CZ ARG 50 1 Y 1 D NH1 ARG 50 F NH1 ARG 50 1 Y 1 D NH2 ARG 50 F NH2 ARG 50 1 Y 1 A MET 1 C MET 1 1 Y 1 A LYS 2 C LYS 2 1 Y 1 A GLY 3 C GLY 3 1 Y 1 A MET 4 C MET 4 1 Y 1 A SER 5 C SER 5 1 Y 1 A LYS 6 C LYS 6 1 Y 1 A ALA 53 C ALA 53 1 Y 1 C MET 1 E MET 1 1 Y 1 C LYS 2 E LYS 2 1 Y 1 C GLY 3 E GLY 3 1 Y 1 C MET 4 E MET 4 1 Y 1 C SER 5 E SER 5 1 Y 1 C LYS 6 E LYS 6 1 Y 1 C ARG 50 E ARG 50 1 Y 1 C ILE 51 E ILE 51 1 Y 1 C GLY 52 E GLY 52 1 Y 1 C ALA 53 E ALA 53 1 Y 1 D ILE 51 F ILE 51 1 Y 1 D GLY 52 F GLY 52 1 Y 1 D ALA 53 F ALA 53 1 Y 1 A PRO 15 -39.76 132.74 1 C ARG 16 -29.85 -47.36 1 C GLU 48 -147.57 -49.93 0.3010000 0.2435000 0.2435000 2.8 20 8691 10.0 97.5 RANDOM 1000000.0 0.1 1 THROUGHOUT 2.0 MOLECULAR REPLACEMENT PDB ENTRY 1PAR 2.8 20 34 2452 0 896 1522 0.009 1.373 19.5 1.46 0.4423000 0.050 0.4519000 20 747 10 10 97.5 2.8 20 1BDV 8691 2 0.0810000 1 2 2.0 97.5 2.5 2.59 62 model building X-PLOR refinement X-PLOR 3.1 data reduction DENZO data scaling SCALEPACK phasing X-PLOR ARC FV10 COCRYSTAL 1 N N 2 N N 3 N N 3 N N 3 N N 3 N N 4 N N 4 N N 4 N N 4 N N 4 N N 4 N N A PRO 15 C PRO 15 HELX_P A GLY 30 C GLY 30 1 AA 16 A SER 32 C SER 32 HELX_P A GLU 48 C GLU 48 1 AB 17 B PRO 15 D PRO 15 HELX_P B GLY 30 D GLY 30 1 BA 16 B SER 32 D SER 32 HELX_P B GLU 48 D GLU 48 1 BB 17 C PRO 15 E PRO 15 HELX_P C GLY 30 E GLY 30 1 CA 16 C SER 32 E SER 32 HELX_P C GLU 48 E GLU 48 1 CB 17 D PRO 15 F PRO 15 HELX_P D GLY 30 F GLY 30 1 DA 16 D SER 32 F SER 32 HELX_P D GLU 48 F GLU 48 1 DB 17 hydrog WATSON-CRICK E DA 2 A N1 DA 2 1_555 F DT 22 B N3 DT 22 1_555 hydrog WATSON-CRICK E DA 2 A N6 DA 2 1_555 F DT 22 B O4 DT 22 1_555 hydrog WATSON-CRICK E DT 3 A N3 DT 3 1_555 F DA 21 B N1 DA 21 1_555 hydrog WATSON-CRICK E DT 3 A O4 DT 3 1_555 F DA 21 B N6 DA 21 1_555 hydrog WATSON-CRICK E DA 4 A N1 DA 4 1_555 F DT 20 B N3 DT 20 1_555 hydrog WATSON-CRICK E DA 4 A N6 DA 4 1_555 F DT 20 B O4 DT 20 1_555 hydrog WATSON-CRICK E DG 5 A N1 DG 5 1_555 F DC 19 B N3 DC 19 1_555 hydrog WATSON-CRICK E DG 5 A N2 DG 5 1_555 F DC 19 B O2 DC 19 1_555 hydrog WATSON-CRICK E DG 5 A O6 DG 5 1_555 F DC 19 B N4 DC 19 1_555 hydrog WATSON-CRICK E DT 6 A N3 DT 6 1_555 F DA 18 B N1 DA 18 1_555 hydrog WATSON-CRICK E DT 6 A O4 DT 6 1_555 F DA 18 B N6 DA 18 1_555 hydrog WATSON-CRICK E DA 7 A N1 DA 7 1_555 F DT 17 B N3 DT 17 1_555 hydrog WATSON-CRICK E DA 7 A N6 DA 7 1_555 F DT 17 B O4 DT 17 1_555 hydrog WATSON-CRICK E DG 8 A N1 DG 8 1_555 F DC 16 B N3 DC 16 1_555 hydrog WATSON-CRICK E DG 8 A N2 DG 8 1_555 F DC 16 B O2 DC 16 1_555 hydrog WATSON-CRICK E DG 8 A O6 DG 8 1_555 F DC 16 B N4 DC 16 1_555 hydrog WATSON-CRICK E DA 9 A N1 DA 9 1_555 F DT 15 B N3 DT 15 1_555 hydrog WATSON-CRICK E DA 9 A N6 DA 9 1_555 F DT 15 B O4 DT 15 1_555 hydrog WATSON-CRICK E DG 10 A N1 DG 10 1_555 F DC 14 B N3 DC 14 1_555 hydrog WATSON-CRICK E DG 10 A N2 DG 10 1_555 F DC 14 B O2 DC 14 1_555 hydrog WATSON-CRICK E DG 10 A O6 DG 10 1_555 F DC 14 B N4 DC 14 1_555 hydrog WATSON-CRICK E DT 11 A N3 DT 11 1_555 F DA 13 B N1 DA 13 1_555 hydrog WATSON-CRICK E DT 11 A O4 DT 11 1_555 F DA 13 B N6 DA 13 1_555 hydrog WATSON-CRICK E DG 12 A N1 DG 12 1_555 F DC 12 B N3 DC 12 1_555 hydrog WATSON-CRICK E DG 12 A N2 DG 12 1_555 F DC 12 B O2 DC 12 1_555 hydrog WATSON-CRICK E DG 12 A O6 DG 12 1_555 F DC 12 B N4 DC 12 1_555 hydrog WATSON-CRICK E DC 13 A N3 DC 13 1_555 F DG 11 B N1 DG 11 1_555 hydrog WATSON-CRICK E DC 13 A N4 DC 13 1_555 F DG 11 B O6 DG 11 1_555 hydrog WATSON-CRICK E DC 13 A O2 DC 13 1_555 F DG 11 B N2 DG 11 1_555 hydrog WATSON-CRICK E DT 14 A N3 DT 14 1_555 F DA 10 B N1 DA 10 1_555 hydrog WATSON-CRICK E DT 14 A O4 DT 14 1_555 F DA 10 B N6 DA 10 1_555 hydrog WATSON-CRICK E DT 15 A N3 DT 15 1_555 F DA 9 B N1 DA 9 1_555 hydrog WATSON-CRICK E DT 15 A O4 DT 15 1_555 F DA 9 B N6 DA 9 1_555 hydrog WATSON-CRICK E DC 16 A N3 DC 16 1_555 F DG 8 B N1 DG 8 1_555 hydrog WATSON-CRICK E DC 16 A N4 DC 16 1_555 F DG 8 B O6 DG 8 1_555 hydrog WATSON-CRICK E DC 16 A O2 DC 16 1_555 F DG 8 B N2 DG 8 1_555 hydrog WATSON-CRICK E DT 17 A N3 DT 17 1_555 F DA 7 B N1 DA 7 1_555 hydrog WATSON-CRICK E DT 17 A O4 DT 17 1_555 F DA 7 B N6 DA 7 1_555 hydrog WATSON-CRICK E DA 18 A N1 DA 18 1_555 F DT 6 B N3 DT 6 1_555 hydrog WATSON-CRICK E DA 18 A N6 DA 18 1_555 F DT 6 B O4 DT 6 1_555 hydrog WATSON-CRICK E DT 19 A N3 DT 19 1_555 F DA 5 B N1 DA 5 1_555 hydrog WATSON-CRICK E DT 19 A O4 DT 19 1_555 F DA 5 B N6 DA 5 1_555 hydrog WATSON-CRICK E DC 20 A N3 DC 20 1_555 F DG 4 B N1 DG 4 1_555 hydrog WATSON-CRICK E DC 20 A N4 DC 20 1_555 F DG 4 B O6 DG 4 1_555 hydrog WATSON-CRICK E DC 20 A O2 DC 20 1_555 F DG 4 B N2 DG 4 1_555 hydrog WATSON-CRICK E DA 21 A N1 DA 21 1_555 F DT 3 B N3 DT 3 1_555 hydrog WATSON-CRICK E DA 21 A N6 DA 21 1_555 F DT 3 B O4 DT 3 1_555 hydrog WATSON-CRICK E DT 22 A N3 DT 22 1_555 F DA 2 B N1 DA 2 1_555 hydrog WATSON-CRICK E DT 22 A O4 DT 22 1_555 F DA 2 B N6 DA 2 1_555 GENE REGULATION/DNA GENE-REGULATING PROTEIN, GENE REGULATION-DNA COMPLEX given -0.511800 0.112700 -0.851700 0.130700 -0.969600 -0.206800 -0.849100 -0.217200 0.481500 63.45470 -8.03550 35.21450 given 0.535600 0.039500 -0.843500 0.042600 -0.998900 -0.019800 -0.843400 -0.025300 -0.536700 58.08270 -4.33970 105.34710 given 0.014600 0.119900 -0.992700 0.100400 -0.987900 -0.117900 -0.994800 -0.098000 -0.026400 70.37200 -5.90280 71.22350 RARC_BPP22 UNP 3 1BDV PDB 1 1BDV PDB 2 1 53 1BDV 1 53 P03050 A 1 1 53 1 53 1BDV 1 53 P03050 B 1 1 53 1 53 1BDV 1 53 P03050 C 1 1 53 1 53 1BDV 1 53 P03050 D 1 1 53 1 22 1BDV 1 22 1BDV E 2 1 22 1 22 1BDV 1 22 1BDV F 3 1 22 1 PHE engineered mutation VAL 10 1BDV A P03050 UNP 10 10 2 PHE engineered mutation VAL 10 1BDV B P03050 UNP 10 10 3 PHE engineered mutation VAL 10 1BDV C P03050 UNP 10 10 4 PHE engineered mutation VAL 10 1BDV D P03050 UNP 10 10 2 2 anti-parallel anti-parallel A PRO 8 C PRO 8 A TRP 14 C TRP 14 B PRO 8 D PRO 8 B TRP 14 D TRP 14 C PRO 8 E PRO 8 C TRP 14 E TRP 14 D PRO 8 F PRO 8 D TRP 14 F TRP 14 4 monoclinic P 1 21 1