0.010798
0.000000
0.000000
0.000000
0.013791
0.000000
0.000000
0.000000
0.024184
0.00000
0.00000
0.00000
Ridder, I.S.
Vos, G.J.
Rozeboom, H.J.
Kalk, K.H.
Dijkstra, B.W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
92.610
72.510
41.350
C2 H3 O2 -1
59.044
ACETATE ION
non-polymer
C2 H4 O2
60.052
ACETIC ACID
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
37
15013
15023
10.1021/bi9815187
9790663
Kinetic analysis and X-ray structure of haloalkane dehalogenase with a modified halide-binding site.
1998
UK
Nature
NATUAS
0006
0028-0836
363
693
Crystallographic Analysis of the Catalytic Mechanism of Haloalkane Dehalogenase
1993
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
232
856
Refined X-Ray Structures of Haloalkane Dehalogenase at Ph 6.2 And Ph 8.2 And Implications for the Reaction Mechanism
1993
UK
Embo J.
EMJODG
0897
0261-4189
10
1297
Crystal Structure of Haloalkane Dehalogenase: An Enzyme to Detoxify Halogenated Alkanes
1991
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
200
611
Crystallization of Haloalkane Dehalogenase from Xanthobacter Autotrophicus Gj10
1988
10.2210/pdb1be0/pdb
pdb_00001be0
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
120
1
DIFFRACTOMETER
1995-09-08
ENRAF-NONIUS FAST
GRAPHITE(002)
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
ELLIOTT GX-21
ACETIC ACID
35161.770
HALOALKANE DEHALOGENASE
3.8.1.5
I2V
1
man
polymer
59.044
ACETATE ION
1
syn
non-polymer
60.052
ACETIC ACID
1
syn
non-polymer
18.015
water
333
nat
water
no
no
MVNAIRTPDQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAP
DFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPA
FSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEA
ISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAETE
MVNAIRTPDQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAP
DFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPA
FSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEA
ISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAETE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Xanthobacter
GJ10
Escherichia
sample
280
Xanthobacter autotrophicus
562
Escherichia coli
1
1.97
37
5.6
PROTEIN WAS CRYSTALLIZED FROM 50% AMMONIUM SULFATE, 100 MM MES, PH 5.6
diffrn_detector
pdbx_database_status
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Other
Database references
Derived calculations
Refinement description
1
0
1998-11-11
1
1
2008-03-24
1
2
2011-07-13
1
3
2018-04-18
1
4
2023-08-02
_diffrn_detector.detector
_pdbx_database_status.process_site
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1998-05-18
REL
REL
ACT
ACETATE ION
ACY
ACETIC ACID
HOH
water
1BEE
PDB ENTRY 1BEE
PDB
experimental model
ACT
402
2
ACT
ACT
402
A
ACY
401
3
ACY
ACY
401
A
HOH
501
4
HOH
HOH
501
A
HOH
502
4
HOH
HOH
502
A
HOH
503
4
HOH
HOH
503
A
HOH
504
4
HOH
HOH
504
A
HOH
505
4
HOH
HOH
505
A
HOH
506
4
HOH
HOH
506
A
HOH
507
4
HOH
HOH
507
A
HOH
508
4
HOH
HOH
508
A
HOH
509
4
HOH
HOH
509
A
HOH
510
4
HOH
HOH
510
A
HOH
511
4
HOH
HOH
511
A
HOH
512
4
HOH
HOH
512
A
HOH
513
4
HOH
HOH
513
A
HOH
514
4
HOH
HOH
514
A
HOH
515
4
HOH
HOH
515
A
HOH
516
4
HOH
HOH
516
A
HOH
517
4
HOH
HOH
517
A
HOH
518
4
HOH
HOH
518
A
HOH
519
4
HOH
HOH
519
A
HOH
520
4
HOH
HOH
520
A
HOH
521
4
HOH
HOH
521
A
HOH
522
4
HOH
HOH
522
A
HOH
523
4
HOH
HOH
523
A
HOH
524
4
HOH
HOH
524
A
HOH
525
4
HOH
HOH
525
A
HOH
526
4
HOH
HOH
526
A
HOH
527
4
HOH
HOH
527
A
HOH
528
4
HOH
HOH
528
A
HOH
529
4
HOH
HOH
529
A
HOH
530
4
HOH
HOH
530
A
HOH
531
4
HOH
HOH
531
A
HOH
532
4
HOH
HOH
532
A
HOH
533
4
HOH
HOH
533
A
HOH
534
4
HOH
HOH
534
A
HOH
535
4
HOH
HOH
535
A
HOH
536
4
HOH
HOH
536
A
HOH
537
4
HOH
HOH
537
A
HOH
538
4
HOH
HOH
538
A
HOH
539
4
HOH
HOH
539
A
HOH
540
4
HOH
HOH
540
A
HOH
541
4
HOH
HOH
541
A
HOH
542
4
HOH
HOH
542
A
HOH
543
4
HOH
HOH
543
A
HOH
544
4
HOH
HOH
544
A
HOH
545
4
HOH
HOH
545
A
HOH
546
4
HOH
HOH
546
A
HOH
547
4
HOH
HOH
547
A
HOH
548
4
HOH
HOH
548
A
HOH
549
4
HOH
HOH
549
A
HOH
550
4
HOH
HOH
550
A
HOH
551
4
HOH
HOH
551
A
HOH
552
4
HOH
HOH
552
A
HOH
553
4
HOH
HOH
553
A
HOH
554
4
HOH
HOH
554
A
HOH
555
4
HOH
HOH
555
A
HOH
556
4
HOH
HOH
556
A
HOH
557
4
HOH
HOH
557
A
HOH
558
4
HOH
HOH
558
A
HOH
559
4
HOH
HOH
559
A
HOH
560
4
HOH
HOH
560
A
HOH
561
4
HOH
HOH
561
A
HOH
562
4
HOH
HOH
562
A
HOH
563
4
HOH
HOH
563
A
HOH
564
4
HOH
HOH
564
A
HOH
565
4
HOH
HOH
565
A
HOH
566
4
HOH
HOH
566
A
HOH
567
4
HOH
HOH
567
A
HOH
568
4
HOH
HOH
568
A
HOH
569
4
HOH
HOH
569
A
HOH
570
4
HOH
HOH
570
A
HOH
571
4
HOH
HOH
571
A
HOH
572
4
HOH
HOH
572
A
HOH
573
4
HOH
HOH
573
A
HOH
574
4
HOH
HOH
574
A
HOH
575
4
HOH
HOH
575
A
HOH
576
4
HOH
HOH
576
A
HOH
577
4
HOH
HOH
577
A
HOH
578
4
HOH
HOH
578
A
HOH
579
4
HOH
HOH
579
A
HOH
580
4
HOH
HOH
580
A
HOH
581
4
HOH
HOH
581
A
HOH
582
4
HOH
HOH
582
A
HOH
583
4
HOH
HOH
583
A
HOH
584
4
HOH
HOH
584
A
HOH
585
4
HOH
HOH
585
A
HOH
586
4
HOH
HOH
586
A
HOH
587
4
HOH
HOH
587
A
HOH
588
4
HOH
HOH
588
A
HOH
589
4
HOH
HOH
589
A
HOH
590
4
HOH
HOH
590
A
HOH
591
4
HOH
HOH
591
A
HOH
592
4
HOH
HOH
592
A
HOH
593
4
HOH
HOH
593
A
HOH
594
4
HOH
HOH
594
A
HOH
595
4
HOH
HOH
595
A
HOH
596
4
HOH
HOH
596
A
HOH
597
4
HOH
HOH
597
A
HOH
598
4
HOH
HOH
598
A
HOH
599
4
HOH
HOH
599
A
HOH
600
4
HOH
HOH
600
A
HOH
601
4
HOH
HOH
601
A
HOH
602
4
HOH
HOH
602
A
HOH
603
4
HOH
HOH
603
A
HOH
604
4
HOH
HOH
604
A
HOH
605
4
HOH
HOH
605
A
HOH
606
4
HOH
HOH
606
A
HOH
607
4
HOH
HOH
607
A
HOH
608
4
HOH
HOH
608
A
HOH
609
4
HOH
HOH
609
A
HOH
610
4
HOH
HOH
610
A
HOH
611
4
HOH
HOH
611
A
HOH
612
4
HOH
HOH
612
A
HOH
613
4
HOH
HOH
613
A
HOH
614
4
HOH
HOH
614
A
HOH
615
4
HOH
HOH
615
A
HOH
616
4
HOH
HOH
616
A
HOH
617
4
HOH
HOH
617
A
HOH
618
4
HOH
HOH
618
A
HOH
619
4
HOH
HOH
619
A
HOH
620
4
HOH
HOH
620
A
HOH
621
4
HOH
HOH
621
A
HOH
622
4
HOH
HOH
622
A
HOH
623
4
HOH
HOH
623
A
HOH
624
4
HOH
HOH
624
A
HOH
625
4
HOH
HOH
625
A
HOH
626
4
HOH
HOH
626
A
HOH
627
4
HOH
HOH
627
A
HOH
628
4
HOH
HOH
628
A
HOH
629
4
HOH
HOH
629
A
HOH
630
4
HOH
HOH
630
A
HOH
631
4
HOH
HOH
631
A
HOH
632
4
HOH
HOH
632
A
HOH
633
4
HOH
HOH
633
A
HOH
634
4
HOH
HOH
634
A
HOH
635
4
HOH
HOH
635
A
HOH
636
4
HOH
HOH
636
A
HOH
637
4
HOH
HOH
637
A
HOH
638
4
HOH
HOH
638
A
HOH
639
4
HOH
HOH
639
A
HOH
640
4
HOH
HOH
640
A
HOH
641
4
HOH
HOH
641
A
HOH
642
4
HOH
HOH
642
A
HOH
643
4
HOH
HOH
643
A
HOH
644
4
HOH
HOH
644
A
HOH
645
4
HOH
HOH
645
A
HOH
646
4
HOH
HOH
646
A
HOH
647
4
HOH
HOH
647
A
HOH
648
4
HOH
HOH
648
A
HOH
649
4
HOH
HOH
649
A
HOH
650
4
HOH
HOH
650
A
HOH
651
4
HOH
HOH
651
A
HOH
652
4
HOH
HOH
652
A
HOH
653
4
HOH
HOH
653
A
HOH
654
4
HOH
HOH
654
A
HOH
655
4
HOH
HOH
655
A
HOH
656
4
HOH
HOH
656
A
HOH
657
4
HOH
HOH
657
A
HOH
658
4
HOH
HOH
658
A
HOH
659
4
HOH
HOH
659
A
HOH
660
4
HOH
HOH
660
A
HOH
661
4
HOH
HOH
661
A
HOH
662
4
HOH
HOH
662
A
HOH
663
4
HOH
HOH
663
A
HOH
664
4
HOH
HOH
664
A
HOH
665
4
HOH
HOH
665
A
HOH
666
4
HOH
HOH
666
A
HOH
667
4
HOH
HOH
667
A
HOH
668
4
HOH
HOH
668
A
HOH
669
4
HOH
HOH
669
A
HOH
670
4
HOH
HOH
670
A
HOH
671
4
HOH
HOH
671
A
HOH
672
4
HOH
HOH
672
A
HOH
673
4
HOH
HOH
673
A
HOH
674
4
HOH
HOH
674
A
HOH
675
4
HOH
HOH
675
A
HOH
676
4
HOH
HOH
676
A
HOH
677
4
HOH
HOH
677
A
HOH
678
4
HOH
HOH
678
A
HOH
679
4
HOH
HOH
679
A
HOH
680
4
HOH
HOH
680
A
HOH
681
4
HOH
HOH
681
A
HOH
682
4
HOH
HOH
682
A
HOH
683
4
HOH
HOH
683
A
HOH
684
4
HOH
HOH
684
A
HOH
685
4
HOH
HOH
685
A
HOH
686
4
HOH
HOH
686
A
HOH
687
4
HOH
HOH
687
A
HOH
688
4
HOH
HOH
688
A
HOH
689
4
HOH
HOH
689
A
HOH
690
4
HOH
HOH
690
A
HOH
691
4
HOH
HOH
691
A
HOH
692
4
HOH
HOH
692
A
HOH
693
4
HOH
HOH
693
A
HOH
694
4
HOH
HOH
694
A
HOH
695
4
HOH
HOH
695
A
HOH
696
4
HOH
HOH
696
A
HOH
697
4
HOH
HOH
697
A
HOH
698
4
HOH
HOH
698
A
HOH
699
4
HOH
HOH
699
A
HOH
700
4
HOH
HOH
700
A
HOH
701
4
HOH
HOH
701
A
HOH
702
4
HOH
HOH
702
A
HOH
703
4
HOH
HOH
703
A
HOH
704
4
HOH
HOH
704
A
HOH
705
4
HOH
HOH
705
A
HOH
706
4
HOH
HOH
706
A
HOH
707
4
HOH
HOH
707
A
HOH
708
4
HOH
HOH
708
A
HOH
709
4
HOH
HOH
709
A
HOH
710
4
HOH
HOH
710
A
HOH
711
4
HOH
HOH
711
A
HOH
712
4
HOH
HOH
712
A
HOH
713
4
HOH
HOH
713
A
HOH
714
4
HOH
HOH
714
A
HOH
715
4
HOH
HOH
715
A
HOH
716
4
HOH
HOH
716
A
HOH
717
4
HOH
HOH
717
A
HOH
718
4
HOH
HOH
718
A
HOH
719
4
HOH
HOH
719
A
HOH
720
4
HOH
HOH
720
A
HOH
721
4
HOH
HOH
721
A
HOH
722
4
HOH
HOH
722
A
HOH
723
4
HOH
HOH
723
A
HOH
724
4
HOH
HOH
724
A
HOH
725
4
HOH
HOH
725
A
HOH
726
4
HOH
HOH
726
A
HOH
727
4
HOH
HOH
727
A
HOH
728
4
HOH
HOH
728
A
HOH
729
4
HOH
HOH
729
A
HOH
730
4
HOH
HOH
730
A
HOH
731
4
HOH
HOH
731
A
HOH
732
4
HOH
HOH
732
A
HOH
733
4
HOH
HOH
733
A
HOH
734
4
HOH
HOH
734
A
HOH
735
4
HOH
HOH
735
A
HOH
736
4
HOH
HOH
736
A
HOH
737
4
HOH
HOH
737
A
HOH
738
4
HOH
HOH
738
A
HOH
739
4
HOH
HOH
739
A
HOH
740
4
HOH
HOH
740
A
HOH
741
4
HOH
HOH
741
A
HOH
742
4
HOH
HOH
742
A
HOH
743
4
HOH
HOH
743
A
HOH
744
4
HOH
HOH
744
A
HOH
745
4
HOH
HOH
745
A
HOH
746
4
HOH
HOH
746
A
HOH
747
4
HOH
HOH
747
A
HOH
748
4
HOH
HOH
748
A
HOH
749
4
HOH
HOH
749
A
HOH
750
4
HOH
HOH
750
A
HOH
751
4
HOH
HOH
751
A
HOH
752
4
HOH
HOH
752
A
HOH
753
4
HOH
HOH
753
A
HOH
754
4
HOH
HOH
754
A
HOH
755
4
HOH
HOH
755
A
HOH
756
4
HOH
HOH
756
A
HOH
757
4
HOH
HOH
757
A
HOH
758
4
HOH
HOH
758
A
HOH
759
4
HOH
HOH
759
A
HOH
760
4
HOH
HOH
760
A
HOH
761
4
HOH
HOH
761
A
HOH
762
4
HOH
HOH
762
A
HOH
763
4
HOH
HOH
763
A
HOH
764
4
HOH
HOH
764
A
HOH
765
4
HOH
HOH
765
A
HOH
766
4
HOH
HOH
766
A
HOH
767
4
HOH
HOH
767
A
HOH
768
4
HOH
HOH
768
A
HOH
769
4
HOH
HOH
769
A
HOH
770
4
HOH
HOH
770
A
HOH
771
4
HOH
HOH
771
A
HOH
772
4
HOH
HOH
772
A
HOH
773
4
HOH
HOH
773
A
HOH
774
4
HOH
HOH
774
A
HOH
775
4
HOH
HOH
775
A
HOH
776
4
HOH
HOH
776
A
HOH
777
4
HOH
HOH
777
A
HOH
778
4
HOH
HOH
778
A
HOH
779
4
HOH
HOH
779
A
HOH
780
4
HOH
HOH
780
A
HOH
781
4
HOH
HOH
781
A
HOH
782
4
HOH
HOH
782
A
HOH
783
4
HOH
HOH
783
A
HOH
784
4
HOH
HOH
784
A
HOH
785
4
HOH
HOH
785
A
HOH
786
4
HOH
HOH
786
A
HOH
787
4
HOH
HOH
787
A
HOH
788
4
HOH
HOH
788
A
HOH
789
4
HOH
HOH
789
A
HOH
790
4
HOH
HOH
790
A
HOH
791
4
HOH
HOH
791
A
HOH
792
4
HOH
HOH
792
A
HOH
793
4
HOH
HOH
793
A
HOH
794
4
HOH
HOH
794
A
HOH
795
4
HOH
HOH
795
A
HOH
796
4
HOH
HOH
796
A
HOH
797
4
HOH
HOH
797
A
HOH
798
4
HOH
HOH
798
A
HOH
799
4
HOH
HOH
799
A
HOH
800
4
HOH
HOH
800
A
HOH
801
4
HOH
HOH
801
A
HOH
802
4
HOH
HOH
802
A
HOH
803
4
HOH
HOH
803
A
HOH
804
4
HOH
HOH
804
A
HOH
805
4
HOH
HOH
805
A
HOH
806
4
HOH
HOH
806
A
HOH
807
4
HOH
HOH
807
A
HOH
808
4
HOH
HOH
808
A
HOH
809
4
HOH
HOH
809
A
HOH
810
4
HOH
HOH
810
A
HOH
811
4
HOH
HOH
811
A
HOH
812
4
HOH
HOH
812
A
HOH
813
4
HOH
HOH
813
A
HOH
814
4
HOH
HOH
814
A
HOH
815
4
HOH
HOH
815
A
HOH
816
4
HOH
HOH
816
A
HOH
817
4
HOH
HOH
817
A
HOH
818
4
HOH
HOH
818
A
HOH
819
4
HOH
HOH
819
A
HOH
820
4
HOH
HOH
820
A
HOH
821
4
HOH
HOH
821
A
HOH
822
4
HOH
HOH
822
A
HOH
823
4
HOH
HOH
823
A
HOH
824
4
HOH
HOH
824
A
HOH
825
4
HOH
HOH
825
A
HOH
826
4
HOH
HOH
826
A
HOH
827
4
HOH
HOH
827
A
HOH
828
4
HOH
HOH
828
A
HOH
829
4
HOH
HOH
829
A
HOH
830
4
HOH
HOH
830
A
HOH
831
4
HOH
HOH
831
A
HOH
832
4
HOH
HOH
832
A
HOH
833
4
HOH
HOH
833
A
MET
1
n
1
MET
1
A
VAL
2
n
2
VAL
2
A
ASN
3
n
3
ASN
3
A
ALA
4
n
4
ALA
4
A
ILE
5
n
5
ILE
5
A
ARG
6
n
6
ARG
6
A
THR
7
n
7
THR
7
A
PRO
8
n
8
PRO
8
A
ASP
9
n
9
ASP
9
A
GLN
10
n
10
GLN
10
A
ARG
11
n
11
ARG
11
A
PHE
12
n
12
PHE
12
A
SER
13
n
13
SER
13
A
ASN
14
n
14
ASN
14
A
LEU
15
n
15
LEU
15
A
ASP
16
n
16
ASP
16
A
GLN
17
n
17
GLN
17
A
TYR
18
n
18
TYR
18
A
PRO
19
n
19
PRO
19
A
PHE
20
n
20
PHE
20
A
SER
21
n
21
SER
21
A
PRO
22
n
22
PRO
22
A
ASN
23
n
23
ASN
23
A
TYR
24
n
24
TYR
24
A
LEU
25
n
25
LEU
25
A
ASP
26
n
26
ASP
26
A
ASP
27
n
27
ASP
27
A
LEU
28
n
28
LEU
28
A
PRO
29
n
29
PRO
29
A
GLY
30
n
30
GLY
30
A
TYR
31
n
31
TYR
31
A
PRO
32
n
32
PRO
32
A
GLY
33
n
33
GLY
33
A
LEU
34
n
34
LEU
34
A
ARG
35
n
35
ARG
35
A
ALA
36
n
36
ALA
36
A
HIS
37
n
37
HIS
37
A
TYR
38
n
38
TYR
38
A
LEU
39
n
39
LEU
39
A
ASP
40
n
40
ASP
40
A
GLU
41
n
41
GLU
41
A
GLY
42
n
42
GLY
42
A
ASN
43
n
43
ASN
43
A
SER
44
n
44
SER
44
A
ASP
45
n
45
ASP
45
A
ALA
46
n
46
ALA
46
A
GLU
47
n
47
GLU
47
A
ASP
48
n
48
ASP
48
A
VAL
49
n
49
VAL
49
A
PHE
50
n
50
PHE
50
A
LEU
51
n
51
LEU
51
A
CYS
52
n
52
CYS
52
A
LEU
53
n
53
LEU
53
A
HIS
54
n
54
HIS
54
A
GLY
55
n
55
GLY
55
A
GLU
56
n
56
GLU
56
A
PRO
57
n
57
PRO
57
A
THR
58
n
58
THR
58
A
TRP
59
n
59
TRP
59
A
SER
60
n
60
SER
60
A
TYR
61
n
61
TYR
61
A
LEU
62
n
62
LEU
62
A
TYR
63
n
63
TYR
63
A
ARG
64
n
64
ARG
64
A
LYS
65
n
65
LYS
65
A
MET
66
n
66
MET
66
A
ILE
67
n
67
ILE
67
A
PRO
68
n
68
PRO
68
A
VAL
69
n
69
VAL
69
A
PHE
70
n
70
PHE
70
A
ALA
71
n
71
ALA
71
A
GLU
72
n
72
GLU
72
A
SER
73
n
73
SER
73
A
GLY
74
n
74
GLY
74
A
ALA
75
n
75
ALA
75
A
ARG
76
n
76
ARG
76
A
VAL
77
n
77
VAL
77
A
ILE
78
n
78
ILE
78
A
ALA
79
n
79
ALA
79
A
PRO
80
n
80
PRO
80
A
ASP
81
n
81
ASP
81
A
PHE
82
n
82
PHE
82
A
PHE
83
n
83
PHE
83
A
GLY
84
n
84
GLY
84
A
PHE
85
n
85
PHE
85
A
GLY
86
n
86
GLY
86
A
LYS
87
n
87
LYS
87
A
SER
88
n
88
SER
88
A
ASP
89
n
89
ASP
89
A
LYS
90
n
90
LYS
90
A
PRO
91
n
91
PRO
91
A
VAL
92
n
92
VAL
92
A
ASP
93
n
93
ASP
93
A
GLU
94
n
94
GLU
94
A
GLU
95
n
95
GLU
95
A
ASP
96
n
96
ASP
96
A
TYR
97
n
97
TYR
97
A
THR
98
n
98
THR
98
A
PHE
99
n
99
PHE
99
A
GLU
100
n
100
GLU
100
A
PHE
101
n
101
PHE
101
A
HIS
102
n
102
HIS
102
A
ARG
103
n
103
ARG
103
A
ASN
104
n
104
ASN
104
A
PHE
105
n
105
PHE
105
A
LEU
106
n
106
LEU
106
A
LEU
107
n
107
LEU
107
A
ALA
108
n
108
ALA
108
A
LEU
109
n
109
LEU
109
A
ILE
110
n
110
ILE
110
A
GLU
111
n
111
GLU
111
A
ARG
112
n
112
ARG
112
A
LEU
113
n
113
LEU
113
A
ASP
114
n
114
ASP
114
A
LEU
115
n
115
LEU
115
A
ARG
116
n
116
ARG
116
A
ASN
117
n
117
ASN
117
A
ILE
118
n
118
ILE
118
A
THR
119
n
119
THR
119
A
LEU
120
n
120
LEU
120
A
VAL
121
n
121
VAL
121
A
VAL
122
n
122
VAL
122
A
GLN
123
n
123
GLN
123
A
ASP
124
n
124
ASP
124
A
TRP
125
n
125
TRP
125
A
GLY
126
n
126
GLY
126
A
GLY
127
n
127
GLY
127
A
PHE
128
n
128
PHE
128
A
LEU
129
n
129
LEU
129
A
GLY
130
n
130
GLY
130
A
LEU
131
n
131
LEU
131
A
THR
132
n
132
THR
132
A
LEU
133
n
133
LEU
133
A
PRO
134
n
134
PRO
134
A
MET
135
n
135
MET
135
A
ALA
136
n
136
ALA
136
A
ASP
137
n
137
ASP
137
A
PRO
138
n
138
PRO
138
A
SER
139
n
139
SER
139
A
ARG
140
n
140
ARG
140
A
PHE
141
n
141
PHE
141
A
LYS
142
n
142
LYS
142
A
ARG
143
n
143
ARG
143
A
LEU
144
n
144
LEU
144
A
ILE
145
n
145
ILE
145
A
ILE
146
n
146
ILE
146
A
MET
147
n
147
MET
147
A
ASN
148
n
148
ASN
148
A
ALA
149
n
149
ALA
149
A
CYS
150
n
150
CYS
150
A
LEU
151
n
151
LEU
151
A
MET
152
n
152
MET
152
A
THR
153
n
153
THR
153
A
ASP
154
n
154
ASP
154
A
PRO
155
n
155
PRO
155
A
VAL
156
n
156
VAL
156
A
THR
157
n
157
THR
157
A
GLN
158
n
158
GLN
158
A
PRO
159
n
159
PRO
159
A
ALA
160
n
160
ALA
160
A
PHE
161
n
161
PHE
161
A
SER
162
n
162
SER
162
A
ALA
163
n
163
ALA
163
A
PHE
164
n
164
PHE
164
A
VAL
165
n
165
VAL
165
A
THR
166
n
166
THR
166
A
GLN
167
n
167
GLN
167
A
PRO
168
n
168
PRO
168
A
ALA
169
n
169
ALA
169
A
ASP
170
n
170
ASP
170
A
GLY
171
n
171
GLY
171
A
PHE
172
n
172
PHE
172
A
THR
173
n
173
THR
173
A
ALA
174
n
174
ALA
174
A
TRP
175
n
175
TRP
175
A
LYS
176
n
176
LYS
176
A
TYR
177
n
177
TYR
177
A
ASP
178
n
178
ASP
178
A
LEU
179
n
179
LEU
179
A
VAL
180
n
180
VAL
180
A
THR
181
n
181
THR
181
A
PRO
182
n
182
PRO
182
A
SER
183
n
183
SER
183
A
ASP
184
n
184
ASP
184
A
LEU
185
n
185
LEU
185
A
ARG
186
n
186
ARG
186
A
LEU
187
n
187
LEU
187
A
ASP
188
n
188
ASP
188
A
GLN
189
n
189
GLN
189
A
PHE
190
n
190
PHE
190
A
MET
191
n
191
MET
191
A
LYS
192
n
192
LYS
192
A
ARG
193
n
193
ARG
193
A
TRP
194
n
194
TRP
194
A
ALA
195
n
195
ALA
195
A
PRO
196
n
196
PRO
196
A
THR
197
n
197
THR
197
A
LEU
198
n
198
LEU
198
A
THR
199
n
199
THR
199
A
GLU
200
n
200
GLU
200
A
ALA
201
n
201
ALA
201
A
GLU
202
n
202
GLU
202
A
ALA
203
n
203
ALA
203
A
SER
204
n
204
SER
204
A
ALA
205
n
205
ALA
205
A
TYR
206
n
206
TYR
206
A
ALA
207
n
207
ALA
207
A
ALA
208
n
208
ALA
208
A
PRO
209
n
209
PRO
209
A
PHE
210
n
210
PHE
210
A
PRO
211
n
211
PRO
211
A
ASP
212
n
212
ASP
212
A
THR
213
n
213
THR
213
A
SER
214
n
214
SER
214
A
TYR
215
n
215
TYR
215
A
GLN
216
n
216
GLN
216
A
ALA
217
n
217
ALA
217
A
GLY
218
n
218
GLY
218
A
VAL
219
n
219
VAL
219
A
ARG
220
n
220
ARG
220
A
LYS
221
n
221
LYS
221
A
PHE
222
n
222
PHE
222
A
PRO
223
n
223
PRO
223
A
LYS
224
n
224
LYS
224
A
MET
225
n
225
MET
225
A
VAL
226
n
226
VAL
226
A
ALA
227
n
227
ALA
227
A
GLN
228
n
228
GLN
228
A
ARG
229
n
229
ARG
229
A
ASP
230
n
230
ASP
230
A
GLN
231
n
231
GLN
231
A
ALA
232
n
232
ALA
232
A
CYS
233
n
233
CYS
233
A
ILE
234
n
234
ILE
234
A
ASP
235
n
235
ASP
235
A
ILE
236
n
236
ILE
236
A
SER
237
n
237
SER
237
A
THR
238
n
238
THR
238
A
GLU
239
n
239
GLU
239
A
ALA
240
n
240
ALA
240
A
ILE
241
n
241
ILE
241
A
SER
242
n
242
SER
242
A
PHE
243
n
243
PHE
243
A
TRP
244
n
244
TRP
244
A
GLN
245
n
245
GLN
245
A
ASN
246
n
246
ASN
246
A
ASP
247
n
247
ASP
247
A
TRP
248
n
248
TRP
248
A
ASN
249
n
249
ASN
249
A
GLY
250
n
250
GLY
250
A
GLN
251
n
251
GLN
251
A
THR
252
n
252
THR
252
A
PHE
253
n
253
PHE
253
A
MET
254
n
254
MET
254
A
ALA
255
n
255
ALA
255
A
ILE
256
n
256
ILE
256
A
GLY
257
n
257
GLY
257
A
MET
258
n
258
MET
258
A
LYS
259
n
259
LYS
259
A
ASP
260
n
260
ASP
260
A
LYS
261
n
261
LYS
261
A
LEU
262
n
262
LEU
262
A
LEU
263
n
263
LEU
263
A
GLY
264
n
264
GLY
264
A
PRO
265
n
265
PRO
265
A
ASP
266
n
266
ASP
266
A
VAL
267
n
267
VAL
267
A
MET
268
n
268
MET
268
A
TYR
269
n
269
TYR
269
A
PRO
270
n
270
PRO
270
A
MET
271
n
271
MET
271
A
LYS
272
n
272
LYS
272
A
ALA
273
n
273
ALA
273
A
LEU
274
n
274
LEU
274
A
ILE
275
n
275
ILE
275
A
ASN
276
n
276
ASN
276
A
GLY
277
n
277
GLY
277
A
CYS
278
n
278
CYS
278
A
PRO
279
n
279
PRO
279
A
GLU
280
n
280
GLU
280
A
PRO
281
n
281
PRO
281
A
LEU
282
n
282
LEU
282
A
GLU
283
n
283
GLU
283
A
ILE
284
n
284
ILE
284
A
ALA
285
n
285
ALA
285
A
ASP
286
n
286
ASP
286
A
ALA
287
n
287
ALA
287
A
GLY
288
n
288
GLY
288
A
HIS
289
n
289
HIS
289
A
PHE
290
n
290
PHE
290
A
VAL
291
n
291
VAL
291
A
GLN
292
n
292
GLN
292
A
GLU
293
n
293
GLU
293
A
PHE
294
n
294
PHE
294
A
GLY
295
n
295
GLY
295
A
GLU
296
n
296
GLU
296
A
GLN
297
n
297
GLN
297
A
VAL
298
n
298
VAL
298
A
ALA
299
n
299
ALA
299
A
ARG
300
n
300
ARG
300
A
GLU
301
n
301
GLU
301
A
ALA
302
n
302
ALA
302
A
LEU
303
n
303
LEU
303
A
LYS
304
n
304
LYS
304
A
HIS
305
n
305
HIS
305
A
PHE
306
n
306
PHE
306
A
ALA
307
n
307
ALA
307
A
GLU
308
n
308
GLU
308
A
THR
309
n
309
THR
309
A
GLU
310
n
310
GLU
310
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
12.39
1.60
122.70
135.09
A
A
A
O
C
N
MET
MET
VAL
1
1
2
Y
1
A
VAL
2
41.29
83.13
1
A
PRO
57
-115.16
54.91
1
A
THR
58
-105.05
-158.40
1
A
GLN
123
-173.36
141.51
1
A
ASP
124
51.29
-129.18
1
A
ASP
137
-159.73
72.37
1
A
ASN
148
-9.02
94.91
1
A
CYS
150
-169.42
-162.55
1
A
ASN
249
-143.71
17.94
1
A
LEU
262
-99.87
-67.21
PARHCSDX.PRO
TOPHCSDX.PRO
PARAM19.WAT
TOPH19.SOL
11.6
0.2200000
0.1690000
0.1690000
1.96
20.
981
18057
5.0
86.1
RANDOM EXTENSION OF SET USED FOR 1BEE MODEL
100000.0
0.0001
1
THROUGHOUT, EXCEPT LAST STEP IN WHICH ALL DATA (WORK+TEST SET) WERE USED
0
PDB ENTRY 1BEE
0.17
1.96
20.
313
2799
8
0
2478
0.007
1.4
23.6
1.2
1.88
1.5
2.64
2.0
3.05
2.0
4.25
2.5
0.2550000
2.04
1216
8
47.2
12.1
1.96
31
1BE0
18082
3
0.0730000
1
11
3.1
87.2
1.96
2.00
0.1810000
1.2
42
model building
X-PLOR
3.843
refinement
X-PLOR
3.843
data reduction
MADNES
data scaling
BIOMOL
phasing
X-PLOR
3.843
HALOALKANE DEHALOGENASE AT PH 5.0 CONTAINING ACETIC ACID
1
N
N
2
N
N
3
N
N
4
N
N
A
SER
60
A
SER
60
HELX_P
A
SER
73
A
SER
73
5
1
14
A
PHE
99
A
PHE
99
HELX_P
A
LEU
113
A
LEU
113
1
2
15
A
TRP
125
A
TRP
125
HELX_P
A
ALA
136
A
ALA
136
5
3
12
A
PRO
159
A
PRO
159
HELX_P
A
THR
166
A
THR
166
5
4
8
A
GLY
171
A
GLY
171
HELX_P
A
THR
181
A
THR
181
1
5
11
A
LEU
187
A
LEU
187
HELX_P
A
TRP
194
A
TRP
194
1
6
8
A
GLU
200
A
GLU
200
HELX_P
A
ALA
208
A
ALA
208
1
7
9
A
ALA
217
A
ALA
217
HELX_P
A
ALA
227
A
ALA
227
1
8
11
A
GLN
231
A
GLN
231
HELX_P
A
ASP
247
A
ASP
247
1
9
17
A
GLY
264
A
GLY
264
HELX_P
A
LEU
274
A
LEU
274
1
10
11
A
VAL
291
A
VAL
291
HELX_P
A
GLU
308
A
GLU
308
5
11
18
DEHALOGENASE
DEHALOGENASE, ALPHA/BETA-HYDROLASE
A
GLU
56
A
GLU
56
1
A
PRO
57
A
PRO
57
-0.92
A
GLN
167
A
GLN
167
1
A
PRO
168
A
PRO
168
0.69
DHLA_XANAU
UNP
1
1
P22643
MINAIRTPDQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAP
DFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPA
FSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEA
ISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAETE
1
310
1BE0
1
310
P22643
A
1
1
310
1
ILE
cloning artifact
VAL
2
1BE0
A
P22643
UNP
2
2
2
8
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
A
ASN
3
A
ASN
3
A
ILE
5
A
ILE
5
A
LYS
90
A
LYS
90
A
VAL
92
A
VAL
92
A
ASN
23
A
ASN
23
A
LEU
25
A
LEU
25
A
ALA
36
A
ALA
36
A
GLU
41
A
GLU
41
A
ARG
76
A
ARG
76
A
ASP
81
A
ASP
81
A
ASP
48
A
ASP
48
A
LEU
53
A
LEU
53
A
ILE
118
A
ILE
118
A
VAL
122
A
VAL
122
A
PHE
141
A
PHE
141
A
MET
147
A
MET
147
A
GLN
251
A
GLN
251
A
GLY
257
A
GLY
257
A
LEU
282
A
LEU
282
A
ILE
284
A
ILE
284
BINDING SITE FOR RESIDUE ACT A 402
A
ACT
402
Software
2
BINDING SITE FOR RESIDUE ACY A 401
A
ACY
401
Software
6
A
GLN
10
A
GLN
10
2
1_555
A
ARG
11
A
ARG
11
2
1_555
A
GLU
56
A
GLU
56
6
1_555
A
ASP
124
A
ASP
124
6
1_555
A
TRP
125
A
TRP
125
6
1_555
A
TRP
175
A
TRP
175
6
1_555
A
PRO
223
A
PRO
223
6
1_555
A
VAL
226
A
VAL
226
6
1_555
18
P 21 21 2