0.015625 0.000000 0.000000 0.000000 0.010929 0.000000 0.000000 0.000000 0.015432 0.00000 0.00000 0.00000 Hu, S.-H. Martin, J.L. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 64.000 91.500 64.800 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 268 137 146 10.1006/jmbi.1997.0940 9149147 Structure of TcpG, the DsbA protein folding catalyst from Vibrio cholerae. 1997 US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 89 6210 Characterization of a Periplasmic Thiol:Disulfide Interchange Protein Required for the Functional Maturation of Secreted Virulence Factors of Vibrio Cholerae 1992 10.2210/pdb1bed/pdb pdb_00001bed 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 290 1 IMAGE PLATE 1994-08-17 RIGAKU RAXIS IIC GRAPHITE(002) M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RUH2R 20523.418 DSBA OXIDOREDUCTASE 1 nat polymer 18.015 water 53 nat water TCPG, DISULFIDE BOND FORMATION PROTEIN no no AQFKEGEHYQVLKTPASSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFMGGNMGQAMSKAYATMIALE VEDKMVPVMFNRIHTLRKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVRRFDKQFQDSGLTGVPAVVVNNRYLVQ GQSVKSLDEYFDLVNYLLTLK AQFKEGEHYQVLKTPASSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFMGGNMGQAMSKAYATMIALE VEDKMVPVMFNRIHTLRKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVRRFDKQFQDSGLTGVPAVVVNNRYLVQ GQSVKSLDEYFDLVNYLLTLK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Vibrio sample 666 Vibrio cholerae 1 2.37 48. 6.5 10-13% EG 4K, 0.1M MES, PH 6.0-6.5 6.0-6.5 database_2 pdbx_initial_refinement_model struct_ref_seq_dif repository Initial release Version format compliance Version format compliance Database references Refinement description 1 0 1997-10-08 1 1 2008-03-24 1 2 2011-07-13 1 3 2023-08-02 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details Y BNL 1996-09-16 REL REL HOH water 1DSB PDB ENTRY 1DSB PDB experimental model HOH 200 2 HOH HOH 200 A HOH 201 2 HOH HOH 201 A HOH 202 2 HOH HOH 202 A HOH 203 2 HOH HOH 203 A HOH 204 2 HOH HOH 204 A HOH 205 2 HOH HOH 205 A HOH 206 2 HOH HOH 206 A HOH 207 2 HOH HOH 207 A HOH 208 2 HOH HOH 208 A HOH 209 2 HOH HOH 209 A HOH 210 2 HOH HOH 210 A HOH 211 2 HOH HOH 211 A HOH 212 2 HOH HOH 212 A HOH 213 2 HOH HOH 213 A HOH 214 2 HOH HOH 214 A HOH 215 2 HOH HOH 215 A HOH 216 2 HOH HOH 216 A HOH 217 2 HOH HOH 217 A HOH 218 2 HOH HOH 218 A HOH 219 2 HOH HOH 219 A HOH 220 2 HOH HOH 220 A HOH 221 2 HOH HOH 221 A HOH 222 2 HOH HOH 222 A HOH 223 2 HOH HOH 223 A HOH 224 2 HOH HOH 224 A HOH 225 2 HOH HOH 225 A HOH 226 2 HOH HOH 226 A HOH 227 2 HOH HOH 227 A HOH 228 2 HOH HOH 228 A HOH 229 2 HOH HOH 229 A HOH 230 2 HOH HOH 230 A HOH 231 2 HOH HOH 231 A HOH 232 2 HOH HOH 232 A HOH 233 2 HOH HOH 233 A HOH 234 2 HOH HOH 234 A HOH 235 2 HOH HOH 235 A HOH 236 2 HOH HOH 236 A HOH 237 2 HOH HOH 237 A HOH 238 2 HOH HOH 238 A HOH 239 2 HOH HOH 239 A HOH 240 2 HOH HOH 240 A HOH 241 2 HOH HOH 241 A HOH 242 2 HOH HOH 242 A HOH 243 2 HOH HOH 243 A HOH 244 2 HOH HOH 244 A HOH 245 2 HOH HOH 245 A HOH 246 2 HOH HOH 246 A HOH 247 2 HOH HOH 247 A HOH 248 2 HOH HOH 248 A HOH 249 2 HOH HOH 249 A HOH 250 2 HOH HOH 250 A HOH 251 2 HOH HOH 251 A HOH 252 2 HOH HOH 252 A ALA 1 n 1 ALA 1 A GLN 2 n 2 GLN 2 A PHE 3 n 3 PHE 3 A LYS 4 n 4 LYS 4 A GLU 5 n 5 GLU 5 A GLY 6 n 6 GLY 6 A GLU 7 n 7 GLU 7 A HIS 8 n 8 HIS 8 A TYR 9 n 9 TYR 9 A GLN 10 n 10 GLN 10 A VAL 11 n 11 VAL 11 A LEU 12 n 12 LEU 12 A LYS 13 n 13 LYS 13 A THR 14 n 14 THR 14 A PRO 15 n 15 PRO 15 A ALA 16 n 16 ALA 16 A SER 17 n 17 SER 17 A SER 18 n 18 SER 18 A SER 19 n 19 SER 19 A PRO 20 n 20 PRO 20 A VAL 21 n 21 VAL 21 A VAL 22 n 22 VAL 22 A SER 23 n 23 SER 23 A GLU 24 n 24 GLU 24 A PHE 25 n 25 PHE 25 A PHE 26 n 26 PHE 26 A SER 27 n 27 SER 27 A PHE 28 n 28 PHE 28 A TYR 29 n 29 TYR 29 A CYS 30 n 30 CYS 30 A PRO 31 n 31 PRO 31 A HIS 32 n 32 HIS 32 A CYS 33 n 33 CYS 33 A ASN 34 n 34 ASN 34 A THR 35 n 35 THR 35 A PHE 36 n 36 PHE 36 A GLU 37 n 37 GLU 37 A PRO 38 n 38 PRO 38 A ILE 39 n 39 ILE 39 A ILE 40 n 40 ILE 40 A ALA 41 n 41 ALA 41 A GLN 42 n 42 GLN 42 A LEU 43 n 43 LEU 43 A LYS 44 n 44 LYS 44 A GLN 45 n 45 GLN 45 A GLN 46 n 46 GLN 46 A LEU 47 n 47 LEU 47 A PRO 48 n 48 PRO 48 A GLU 49 n 49 GLU 49 A GLY 50 n 50 GLY 50 A ALA 51 n 51 ALA 51 A LYS 52 n 52 LYS 52 A PHE 53 n 53 PHE 53 A GLN 54 n 54 GLN 54 A LYS 55 n 55 LYS 55 A ASN 56 n 56 ASN 56 A HIS 57 n 57 HIS 57 A VAL 58 n 58 VAL 58 A SER 59 n 59 SER 59 A PHE 60 n 60 PHE 60 A MET 61 n 61 MET 61 A GLY 62 n 62 GLY 62 A GLY 63 n 63 GLY 63 A ASN 64 n 64 ASN 64 A MET 65 n 65 MET 65 A GLY 66 n 66 GLY 66 A GLN 67 n 67 GLN 67 A ALA 68 n 68 ALA 68 A MET 69 n 69 MET 69 A SER 70 n 70 SER 70 A LYS 71 n 71 LYS 71 A ALA 72 n 72 ALA 72 A TYR 73 n 73 TYR 73 A ALA 74 n 74 ALA 74 A THR 75 n 75 THR 75 A MET 76 n 76 MET 76 A ILE 77 n 77 ILE 77 A ALA 78 n 78 ALA 78 A LEU 79 n 79 LEU 79 A GLU 80 n 80 GLU 80 A VAL 81 n 81 VAL 81 A GLU 82 n 82 GLU 82 A ASP 83 n 83 ASP 83 A LYS 84 n 84 LYS 84 A MET 85 n 85 MET 85 A VAL 86 n 86 VAL 86 A PRO 87 n 87 PRO 87 A VAL 88 n 88 VAL 88 A MET 89 n 89 MET 89 A PHE 90 n 90 PHE 90 A ASN 91 n 91 ASN 91 A ARG 92 n 92 ARG 92 A ILE 93 n 93 ILE 93 A HIS 94 n 94 HIS 94 A THR 95 n 95 THR 95 A LEU 96 n 96 LEU 96 A ARG 97 n 97 ARG 97 A LYS 98 n 98 LYS 98 A PRO 99 n 99 PRO 99 A PRO 100 n 100 PRO 100 A LYS 101 n 101 LYS 101 A ASP 102 n 102 ASP 102 A GLU 103 n 103 GLU 103 A GLN 104 n 104 GLN 104 A GLU 105 n 105 GLU 105 A LEU 106 n 106 LEU 106 A ARG 107 n 107 ARG 107 A GLN 108 n 108 GLN 108 A ILE 109 n 109 ILE 109 A PHE 110 n 110 PHE 110 A LEU 111 n 111 LEU 111 A ASP 112 n 112 ASP 112 A GLU 113 n 113 GLU 113 A GLY 114 n 114 GLY 114 A ILE 115 n 115 ILE 115 A ASP 116 n 116 ASP 116 A ALA 117 n 117 ALA 117 A ALA 118 n 118 ALA 118 A LYS 119 n 119 LYS 119 A PHE 120 n 120 PHE 120 A ASP 121 n 121 ASP 121 A ALA 122 n 122 ALA 122 A ALA 123 n 123 ALA 123 A TYR 124 n 124 TYR 124 A ASN 125 n 125 ASN 125 A GLY 126 n 126 GLY 126 A PHE 127 n 127 PHE 127 A ALA 128 n 128 ALA 128 A VAL 129 n 129 VAL 129 A ASP 130 n 130 ASP 130 A SER 131 n 131 SER 131 A MET 132 n 132 MET 132 A VAL 133 n 133 VAL 133 A ARG 134 n 134 ARG 134 A ARG 135 n 135 ARG 135 A PHE 136 n 136 PHE 136 A ASP 137 n 137 ASP 137 A LYS 138 n 138 LYS 138 A GLN 139 n 139 GLN 139 A PHE 140 n 140 PHE 140 A GLN 141 n 141 GLN 141 A ASP 142 n 142 ASP 142 A SER 143 n 143 SER 143 A GLY 144 n 144 GLY 144 A LEU 145 n 145 LEU 145 A THR 146 n 146 THR 146 A GLY 147 n 147 GLY 147 A VAL 148 n 148 VAL 148 A PRO 149 n 149 PRO 149 A ALA 150 n 150 ALA 150 A VAL 151 n 151 VAL 151 A VAL 152 n 152 VAL 152 A VAL 153 n 153 VAL 153 A ASN 154 n 154 ASN 154 A ASN 155 n 155 ASN 155 A ARG 156 n 156 ARG 156 A TYR 157 n 157 TYR 157 A LEU 158 n 158 LEU 158 A VAL 159 n 159 VAL 159 A GLN 160 n 160 GLN 160 A GLY 161 n 161 GLY 161 A GLN 162 n 162 GLN 162 A SER 163 n 163 SER 163 A VAL 164 n 164 VAL 164 A LYS 165 n 165 LYS 165 A SER 166 n 166 SER 166 A LEU 167 n 167 LEU 167 A ASP 168 n 168 ASP 168 A GLU 169 n 169 GLU 169 A TYR 170 n 170 TYR 170 A PHE 171 n 171 PHE 171 A ASP 172 n 172 ASP 172 A LEU 173 n 173 LEU 173 A VAL 174 n 174 VAL 174 A ASN 175 n 175 ASN 175 A TYR 176 n 176 TYR 176 A LEU 177 n 177 LEU 177 A LEU 178 n 178 LEU 178 A THR 179 n 179 THR 179 A LEU 180 n 180 LEU 180 A LYS 181 n 181 LYS 181 A author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 3_556 -x,y,-z+3/2 crystal symmetry operation 0.0000000000 0.0000000000 97.2000000000 A O GLN 10 A O GLN 10 A N LEU 158 A N LEU 158 A O LYS 52 A O LYS 52 A N VAL 22 A N VAL 22 A O SER 23 A O SER 23 A N VAL 152 A N VAL 152 1 A CG LYS 4 A CG LYS 4 1 Y 1 A CD LYS 4 A CD LYS 4 1 Y 1 A CE LYS 4 A CE LYS 4 1 Y 1 A NZ LYS 4 A NZ LYS 4 1 Y 1 A CG GLN 10 A CG GLN 10 1 Y 1 A CD GLN 10 A CD GLN 10 1 Y 1 A OE1 GLN 10 A OE1 GLN 10 1 Y 1 A NE2 GLN 10 A NE2 GLN 10 1 Y 1 A CG1 VAL 11 A CG1 VAL 11 1 Y 1 A CG2 VAL 11 A CG2 VAL 11 1 Y 1 A CG LYS 13 A CG LYS 13 1 Y 1 A CD LYS 13 A CD LYS 13 1 Y 1 A CE LYS 13 A CE LYS 13 1 Y 1 A NZ LYS 13 A NZ LYS 13 1 Y 1 A OG SER 18 A OG SER 18 1 Y 1 A CG GLN 45 A CG GLN 45 1 Y 1 A CD GLN 45 A CD GLN 45 1 Y 1 A OE1 GLN 45 A OE1 GLN 45 1 Y 1 A NE2 GLN 45 A NE2 GLN 45 1 Y 1 A CG GLN 46 A CG GLN 46 1 Y 1 A CD GLN 46 A CD GLN 46 1 Y 1 A OE1 GLN 46 A OE1 GLN 46 1 Y 1 A NE2 GLN 46 A NE2 GLN 46 1 Y 1 A CG LYS 52 A CG LYS 52 1 Y 1 A CD LYS 52 A CD LYS 52 1 Y 1 A CE LYS 52 A CE LYS 52 1 Y 1 A NZ LYS 52 A NZ LYS 52 1 Y 1 A CG ARG 97 A CG ARG 97 1 Y 1 A CD ARG 97 A CD ARG 97 1 Y 1 A NE ARG 97 A NE ARG 97 1 Y 1 A CZ ARG 97 A CZ ARG 97 1 Y 1 A NH1 ARG 97 A NH1 ARG 97 1 Y 1 A NH2 ARG 97 A NH2 ARG 97 1 Y 1 A CG LYS 98 A CG LYS 98 1 Y 1 A CD LYS 98 A CD LYS 98 1 Y 1 A CE LYS 98 A CE LYS 98 1 Y 1 A NZ LYS 98 A NZ LYS 98 1 Y 1 A CG GLN 160 A CG GLN 160 1 Y 1 A CD GLN 160 A CD GLN 160 1 Y 1 A OE1 GLN 160 A OE1 GLN 160 1 Y 1 A NE2 GLN 160 A NE2 GLN 160 1 Y 1 A CG GLN 162 A CG GLN 162 1 Y 1 A CD GLN 162 A CD GLN 162 1 Y 1 A OE1 GLN 162 A OE1 GLN 162 1 Y 1 A NE2 GLN 162 A NE2 GLN 162 1 Y 1 A CG1 VAL 164 A CG1 VAL 164 1 Y 1 A CG2 VAL 164 A CG2 VAL 164 1 Y 1 A CG LYS 165 A CG LYS 165 1 Y 1 A CD LYS 165 A CD LYS 165 1 Y 1 A CE LYS 165 A CE LYS 165 1 Y 1 A NZ LYS 165 A NZ LYS 165 1 Y 1 A OG SER 166 A OG SER 166 1 Y 1 A CG LEU 167 A CG LEU 167 1 Y 1 A CD1 LEU 167 A CD1 LEU 167 1 Y 1 A CD2 LEU 167 A CD2 LEU 167 1 Y 1 A CG ASP 168 A CG ASP 168 1 Y 1 A OD1 ASP 168 A OD1 ASP 168 1 Y 1 A OD2 ASP 168 A OD2 ASP 168 1 Y 1 A CG TYR 176 A CG TYR 176 1 Y 1 A CD1 TYR 176 A CD1 TYR 176 1 Y 1 A CD2 TYR 176 A CD2 TYR 176 1 Y 1 A CE1 TYR 176 A CE1 TYR 176 1 Y 1 A CE2 TYR 176 A CE2 TYR 176 1 Y 1 A CZ TYR 176 A CZ TYR 176 1 Y 1 A OH TYR 176 A OH TYR 176 1 Y 1 A CG LYS 181 A CG LYS 181 1 Y 1 A CD LYS 181 A CD LYS 181 1 Y 1 A CE LYS 181 A CE LYS 181 1 Y 1 A NZ LYS 181 A NZ LYS 181 1 Y 1 A GLU 7 -131.51 -54.56 1 A HIS 94 -97.73 -60.01 1 A ASN 155 70.07 -5.62 1 A GLN 160 -91.75 52.72 1 A GLN 162 -62.21 2.00 1 A LYS 165 -71.84 -91.68 PARHCSDX.PRO TOPHCSDX.PRO PARAM19.SOL TOPH19.SOL 38.2 0.241 0.205 0.205 2.0 20. 931 9309 10. 70. RANDOM 1 THROUGHOUT 2. MOLECULAR REPLACEMENT PDB ENTRY 1DSB 0.25 0.24 20.0 2.0 20. 53 1438 0 0 1385 0.007 1.2 23.1 1.2 1.5 2.0 2.0 2.5 0.368 0.277 2.2 75 681 5.3 54. 31. 2.0 40.0 1BED 12974 0. 0.062 1 13.1 5.7 98.2 0.341 2.0 2.07 3.4 2.9 91.7 data reduction DENZO data scaling SCALEPACK model building X-PLOR 3.1 refinement X-PLOR 3.1 phasing X-PLOR 3.1 STRUCTURE OF DISULFIDE OXIDOREDUCTASE 1 N N 2 N N A CYS 30 A CYS 30 HELX_P A GLU 37 A GLU 37 1 1 8 A PRO 38 A PRO 38 HELX_P A LEU 47 A LEU 47 1 1' 10 A GLY 63 A GLY 63 HELX_P A LEU 79 A LEU 79 1 2 17 A VAL 81 A VAL 81 HELX_P A HIS 94 A HIS 94 1 3 14 A ASP 102 A ASP 102 HELX_P A GLU 113 A GLU 113 1 4 12 A ASP 116 A ASP 116 HELX_P A ASN 125 A ASN 125 1 5 10 A PHE 127 A PHE 127 HELX_P A GLY 144 A GLY 144 1 6 18 A SER 166 A SER 166 HELX_P A THR 179 A THR 179 1 7 14 disulf 2.038 A CYS 30 A SG CYS 30 1_555 A CYS 33 A SG CYS 33 1_555 OXIDOREDUCTASE TCPG, PROTEIN DISULFIDE ISOMERASE, DISULFIDE OXIDOREDUCTASE, OXIDOREDUCTASE A VAL 148 A VAL 148 1 A PRO 149 A PRO 149 -0.44 DSBA_VIBCH UNP 1 1 P32557 MKKLFALVATLMLSVSAYAAQFKEGEHYQVLKTPASSSPVVNEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFM GGNMGQAMSKAYATMIALEVEDKMVPVMFNRIHTLRKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVRRFDKQFQ DSGLTGVPAVVVNNRYLVQGQSVKSLDEYFDLVNYLLTLK 20 200 1BED 1 181 P32557 A 1 1 181 1 ASN conflict SER 23 1BED A P32557 UNP 42 23 2 3 anti-parallel parallel anti-parallel A HIS 8 A HIS 8 A LEU 12 A LEU 12 A ARG 156 A ARG 156 A GLN 160 A GLN 160 A LYS 52 A LYS 52 A VAL 58 A VAL 58 A VAL 21 A VAL 21 A PHE 26 A PHE 26 A ALA 150 A ALA 150 A ASN 154 A ASN 154 20 C 2 2 21