0.010506
0.000000
0.000000
0.000000
0.013704
0.000000
0.000000
0.000000
0.024096
0.00000
0.00000
0.00000
Ridder, I.S.
Vos, G.J.
Rozeboom, H.J.
Kalk, K.H.
Dijkstra, B.W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
95.180
72.970
41.500
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
37
15013
15023
10.1021/bi9815187
9790663
Kinetic analysis and X-ray structure of haloalkane dehalogenase with a modified halide-binding site.
1998
UK
Nature
NATUAS
0006
0028-0836
363
693
Crystallographic Analysis of the Catalytic Mechanism of Haloalkane Dehalogenase
1993
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
232
856
Refined X-Ray Structures of Haloalkane Dehalogenase at Ph 6.2 And Ph 8.2 And Implications for the Reaction Mechanism
1993
UK
Embo J.
EMJODG
0897
0261-4189
10
1297
Crystal Structure of Haloalkane Dehalogenase: An Enzyme to Detoxify Halogenated Alkanes
1991
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
200
611
Crystallization of Haloalkane Dehalogenase from Xanthobacter Autotrophicus Gj10
1988
10.2210/pdb1bee/pdb
pdb_00001bee
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
DIFFRACTOMETER
1995-05-08
ENRAF-NONIUS FAST
GRAPHITE(002)
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
ELLIOTT GX-21
35138.734
HALOALKANE DEHALOGENASE
3.8.1.5
I2V, W175Y
1
man
polymer
18.015
water
82
nat
water
no
no
MVNAIRTPDQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAP
DFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPA
FSAFVTQPADGFTAYKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEA
ISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAETE
MVNAIRTPDQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAP
DFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPA
FSAFVTQPADGFTAYKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEA
ISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAETE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Xanthobacter
GJ10
Escherichia
sample
280
Xanthobacter autotrophicus
562
Escherichia coli
1
2.06
40
5.6
PROTEIN WAS CRYSTALLIZED FROM 50% AMMONIUM SULFATE, 100 MM MES, PH 5.6
diffrn_detector
pdbx_database_status
database_2
struct_ref_seq_dif
pdbx_initial_refinement_model
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Data collection
Other
Database references
Refinement description
Data collection
1
0
1998-11-11
1
1
2008-03-24
1
2
2011-07-13
1
3
2018-04-18
1
4
2021-11-03
1
5
2023-08-02
1
6
2024-05-22
_diffrn_detector.detector
_pdbx_database_status.process_site
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
Y
BNL
1998-05-13
REL
REL
HOH
water
2HAD
PDB ENTRY 2HAD
PDB
experimental model
HOH
601
2
HOH
HOH
601
A
HOH
602
2
HOH
HOH
602
A
HOH
603
2
HOH
HOH
603
A
HOH
604
2
HOH
HOH
604
A
HOH
605
2
HOH
HOH
605
A
HOH
606
2
HOH
HOH
606
A
HOH
607
2
HOH
HOH
607
A
HOH
608
2
HOH
HOH
608
A
HOH
609
2
HOH
HOH
609
A
HOH
610
2
HOH
HOH
610
A
HOH
611
2
HOH
HOH
611
A
HOH
612
2
HOH
HOH
612
A
HOH
613
2
HOH
HOH
613
A
HOH
614
2
HOH
HOH
614
A
HOH
615
2
HOH
HOH
615
A
HOH
616
2
HOH
HOH
616
A
HOH
617
2
HOH
HOH
617
A
HOH
618
2
HOH
HOH
618
A
HOH
619
2
HOH
HOH
619
A
HOH
620
2
HOH
HOH
620
A
HOH
621
2
HOH
HOH
621
A
HOH
622
2
HOH
HOH
622
A
HOH
623
2
HOH
HOH
623
A
HOH
624
2
HOH
HOH
624
A
HOH
625
2
HOH
HOH
625
A
HOH
626
2
HOH
HOH
626
A
HOH
627
2
HOH
HOH
627
A
HOH
628
2
HOH
HOH
628
A
HOH
629
2
HOH
HOH
629
A
HOH
630
2
HOH
HOH
630
A
HOH
631
2
HOH
HOH
631
A
HOH
632
2
HOH
HOH
632
A
HOH
633
2
HOH
HOH
633
A
HOH
634
2
HOH
HOH
634
A
HOH
635
2
HOH
HOH
635
A
HOH
636
2
HOH
HOH
636
A
HOH
637
2
HOH
HOH
637
A
HOH
638
2
HOH
HOH
638
A
HOH
639
2
HOH
HOH
639
A
HOH
640
2
HOH
HOH
640
A
HOH
641
2
HOH
HOH
641
A
HOH
642
2
HOH
HOH
642
A
HOH
643
2
HOH
HOH
643
A
HOH
644
2
HOH
HOH
644
A
HOH
645
2
HOH
HOH
645
A
HOH
646
2
HOH
HOH
646
A
HOH
647
2
HOH
HOH
647
A
HOH
648
2
HOH
HOH
648
A
HOH
649
2
HOH
HOH
649
A
HOH
650
2
HOH
HOH
650
A
HOH
651
2
HOH
HOH
651
A
HOH
652
2
HOH
HOH
652
A
HOH
653
2
HOH
HOH
653
A
HOH
654
2
HOH
HOH
654
A
HOH
655
2
HOH
HOH
655
A
HOH
656
2
HOH
HOH
656
A
HOH
657
2
HOH
HOH
657
A
HOH
658
2
HOH
HOH
658
A
HOH
659
2
HOH
HOH
659
A
HOH
660
2
HOH
HOH
660
A
HOH
661
2
HOH
HOH
661
A
HOH
662
2
HOH
HOH
662
A
HOH
663
2
HOH
HOH
663
A
HOH
664
2
HOH
HOH
664
A
HOH
665
2
HOH
HOH
665
A
HOH
666
2
HOH
HOH
666
A
HOH
667
2
HOH
HOH
667
A
HOH
668
2
HOH
HOH
668
A
HOH
669
2
HOH
HOH
669
A
HOH
670
2
HOH
HOH
670
A
HOH
671
2
HOH
HOH
671
A
HOH
672
2
HOH
HOH
672
A
HOH
673
2
HOH
HOH
673
A
HOH
674
2
HOH
HOH
674
A
HOH
675
2
HOH
HOH
675
A
HOH
676
2
HOH
HOH
676
A
HOH
677
2
HOH
HOH
677
A
HOH
678
2
HOH
HOH
678
A
HOH
679
2
HOH
HOH
679
A
HOH
680
2
HOH
HOH
680
A
HOH
681
2
HOH
HOH
681
A
HOH
682
2
HOH
HOH
682
A
MET
1
n
1
MET
1
A
VAL
2
n
2
VAL
2
A
ASN
3
n
3
ASN
3
A
ALA
4
n
4
ALA
4
A
ILE
5
n
5
ILE
5
A
ARG
6
n
6
ARG
6
A
THR
7
n
7
THR
7
A
PRO
8
n
8
PRO
8
A
ASP
9
n
9
ASP
9
A
GLN
10
n
10
GLN
10
A
ARG
11
n
11
ARG
11
A
PHE
12
n
12
PHE
12
A
SER
13
n
13
SER
13
A
ASN
14
n
14
ASN
14
A
LEU
15
n
15
LEU
15
A
ASP
16
n
16
ASP
16
A
GLN
17
n
17
GLN
17
A
TYR
18
n
18
TYR
18
A
PRO
19
n
19
PRO
19
A
PHE
20
n
20
PHE
20
A
SER
21
n
21
SER
21
A
PRO
22
n
22
PRO
22
A
ASN
23
n
23
ASN
23
A
TYR
24
n
24
TYR
24
A
LEU
25
n
25
LEU
25
A
ASP
26
n
26
ASP
26
A
ASP
27
n
27
ASP
27
A
LEU
28
n
28
LEU
28
A
PRO
29
n
29
PRO
29
A
GLY
30
n
30
GLY
30
A
TYR
31
n
31
TYR
31
A
PRO
32
n
32
PRO
32
A
GLY
33
n
33
GLY
33
A
LEU
34
n
34
LEU
34
A
ARG
35
n
35
ARG
35
A
ALA
36
n
36
ALA
36
A
HIS
37
n
37
HIS
37
A
TYR
38
n
38
TYR
38
A
LEU
39
n
39
LEU
39
A
ASP
40
n
40
ASP
40
A
GLU
41
n
41
GLU
41
A
GLY
42
n
42
GLY
42
A
ASN
43
n
43
ASN
43
A
SER
44
n
44
SER
44
A
ASP
45
n
45
ASP
45
A
ALA
46
n
46
ALA
46
A
GLU
47
n
47
GLU
47
A
ASP
48
n
48
ASP
48
A
VAL
49
n
49
VAL
49
A
PHE
50
n
50
PHE
50
A
LEU
51
n
51
LEU
51
A
CYS
52
n
52
CYS
52
A
LEU
53
n
53
LEU
53
A
HIS
54
n
54
HIS
54
A
GLY
55
n
55
GLY
55
A
GLU
56
n
56
GLU
56
A
PRO
57
n
57
PRO
57
A
THR
58
n
58
THR
58
A
TRP
59
n
59
TRP
59
A
SER
60
n
60
SER
60
A
TYR
61
n
61
TYR
61
A
LEU
62
n
62
LEU
62
A
TYR
63
n
63
TYR
63
A
ARG
64
n
64
ARG
64
A
LYS
65
n
65
LYS
65
A
MET
66
n
66
MET
66
A
ILE
67
n
67
ILE
67
A
PRO
68
n
68
PRO
68
A
VAL
69
n
69
VAL
69
A
PHE
70
n
70
PHE
70
A
ALA
71
n
71
ALA
71
A
GLU
72
n
72
GLU
72
A
SER
73
n
73
SER
73
A
GLY
74
n
74
GLY
74
A
ALA
75
n
75
ALA
75
A
ARG
76
n
76
ARG
76
A
VAL
77
n
77
VAL
77
A
ILE
78
n
78
ILE
78
A
ALA
79
n
79
ALA
79
A
PRO
80
n
80
PRO
80
A
ASP
81
n
81
ASP
81
A
PHE
82
n
82
PHE
82
A
PHE
83
n
83
PHE
83
A
GLY
84
n
84
GLY
84
A
PHE
85
n
85
PHE
85
A
GLY
86
n
86
GLY
86
A
LYS
87
n
87
LYS
87
A
SER
88
n
88
SER
88
A
ASP
89
n
89
ASP
89
A
LYS
90
n
90
LYS
90
A
PRO
91
n
91
PRO
91
A
VAL
92
n
92
VAL
92
A
ASP
93
n
93
ASP
93
A
GLU
94
n
94
GLU
94
A
GLU
95
n
95
GLU
95
A
ASP
96
n
96
ASP
96
A
TYR
97
n
97
TYR
97
A
THR
98
n
98
THR
98
A
PHE
99
n
99
PHE
99
A
GLU
100
n
100
GLU
100
A
PHE
101
n
101
PHE
101
A
HIS
102
n
102
HIS
102
A
ARG
103
n
103
ARG
103
A
ASN
104
n
104
ASN
104
A
PHE
105
n
105
PHE
105
A
LEU
106
n
106
LEU
106
A
LEU
107
n
107
LEU
107
A
ALA
108
n
108
ALA
108
A
LEU
109
n
109
LEU
109
A
ILE
110
n
110
ILE
110
A
GLU
111
n
111
GLU
111
A
ARG
112
n
112
ARG
112
A
LEU
113
n
113
LEU
113
A
ASP
114
n
114
ASP
114
A
LEU
115
n
115
LEU
115
A
ARG
116
n
116
ARG
116
A
ASN
117
n
117
ASN
117
A
ILE
118
n
118
ILE
118
A
THR
119
n
119
THR
119
A
LEU
120
n
120
LEU
120
A
VAL
121
n
121
VAL
121
A
VAL
122
n
122
VAL
122
A
GLN
123
n
123
GLN
123
A
ASP
124
n
124
ASP
124
A
TRP
125
n
125
TRP
125
A
GLY
126
n
126
GLY
126
A
GLY
127
n
127
GLY
127
A
PHE
128
n
128
PHE
128
A
LEU
129
n
129
LEU
129
A
GLY
130
n
130
GLY
130
A
LEU
131
n
131
LEU
131
A
THR
132
n
132
THR
132
A
LEU
133
n
133
LEU
133
A
PRO
134
n
134
PRO
134
A
MET
135
n
135
MET
135
A
ALA
136
n
136
ALA
136
A
ASP
137
n
137
ASP
137
A
PRO
138
n
138
PRO
138
A
SER
139
n
139
SER
139
A
ARG
140
n
140
ARG
140
A
PHE
141
n
141
PHE
141
A
LYS
142
n
142
LYS
142
A
ARG
143
n
143
ARG
143
A
LEU
144
n
144
LEU
144
A
ILE
145
n
145
ILE
145
A
ILE
146
n
146
ILE
146
A
MET
147
n
147
MET
147
A
ASN
148
n
148
ASN
148
A
ALA
149
n
149
ALA
149
A
CYS
150
n
150
CYS
150
A
LEU
151
n
151
LEU
151
A
MET
152
n
152
MET
152
A
THR
153
n
153
THR
153
A
ASP
154
n
154
ASP
154
A
PRO
155
n
155
PRO
155
A
VAL
156
n
156
VAL
156
A
THR
157
n
157
THR
157
A
GLN
158
n
158
GLN
158
A
PRO
159
n
159
PRO
159
A
ALA
160
n
160
ALA
160
A
PHE
161
n
161
PHE
161
A
SER
162
n
162
SER
162
A
ALA
163
n
163
ALA
163
A
PHE
164
n
164
PHE
164
A
VAL
165
n
165
VAL
165
A
THR
166
n
166
THR
166
A
GLN
167
n
167
GLN
167
A
PRO
168
n
168
PRO
168
A
ALA
169
n
169
ALA
169
A
ASP
170
n
170
ASP
170
A
GLY
171
n
171
GLY
171
A
PHE
172
n
172
PHE
172
A
THR
173
n
173
THR
173
A
ALA
174
n
174
ALA
174
A
TYR
175
n
175
TYR
175
A
LYS
176
n
176
LYS
176
A
TYR
177
n
177
TYR
177
A
ASP
178
n
178
ASP
178
A
LEU
179
n
179
LEU
179
A
VAL
180
n
180
VAL
180
A
THR
181
n
181
THR
181
A
PRO
182
n
182
PRO
182
A
SER
183
n
183
SER
183
A
ASP
184
n
184
ASP
184
A
LEU
185
n
185
LEU
185
A
ARG
186
n
186
ARG
186
A
LEU
187
n
187
LEU
187
A
ASP
188
n
188
ASP
188
A
GLN
189
n
189
GLN
189
A
PHE
190
n
190
PHE
190
A
MET
191
n
191
MET
191
A
LYS
192
n
192
LYS
192
A
ARG
193
n
193
ARG
193
A
TRP
194
n
194
TRP
194
A
ALA
195
n
195
ALA
195
A
PRO
196
n
196
PRO
196
A
THR
197
n
197
THR
197
A
LEU
198
n
198
LEU
198
A
THR
199
n
199
THR
199
A
GLU
200
n
200
GLU
200
A
ALA
201
n
201
ALA
201
A
GLU
202
n
202
GLU
202
A
ALA
203
n
203
ALA
203
A
SER
204
n
204
SER
204
A
ALA
205
n
205
ALA
205
A
TYR
206
n
206
TYR
206
A
ALA
207
n
207
ALA
207
A
ALA
208
n
208
ALA
208
A
PRO
209
n
209
PRO
209
A
PHE
210
n
210
PHE
210
A
PRO
211
n
211
PRO
211
A
ASP
212
n
212
ASP
212
A
THR
213
n
213
THR
213
A
SER
214
n
214
SER
214
A
TYR
215
n
215
TYR
215
A
GLN
216
n
216
GLN
216
A
ALA
217
n
217
ALA
217
A
GLY
218
n
218
GLY
218
A
VAL
219
n
219
VAL
219
A
ARG
220
n
220
ARG
220
A
LYS
221
n
221
LYS
221
A
PHE
222
n
222
PHE
222
A
PRO
223
n
223
PRO
223
A
LYS
224
n
224
LYS
224
A
MET
225
n
225
MET
225
A
VAL
226
n
226
VAL
226
A
ALA
227
n
227
ALA
227
A
GLN
228
n
228
GLN
228
A
ARG
229
n
229
ARG
229
A
ASP
230
n
230
ASP
230
A
GLN
231
n
231
GLN
231
A
ALA
232
n
232
ALA
232
A
CYS
233
n
233
CYS
233
A
ILE
234
n
234
ILE
234
A
ASP
235
n
235
ASP
235
A
ILE
236
n
236
ILE
236
A
SER
237
n
237
SER
237
A
THR
238
n
238
THR
238
A
GLU
239
n
239
GLU
239
A
ALA
240
n
240
ALA
240
A
ILE
241
n
241
ILE
241
A
SER
242
n
242
SER
242
A
PHE
243
n
243
PHE
243
A
TRP
244
n
244
TRP
244
A
GLN
245
n
245
GLN
245
A
ASN
246
n
246
ASN
246
A
ASP
247
n
247
ASP
247
A
TRP
248
n
248
TRP
248
A
ASN
249
n
249
ASN
249
A
GLY
250
n
250
GLY
250
A
GLN
251
n
251
GLN
251
A
THR
252
n
252
THR
252
A
PHE
253
n
253
PHE
253
A
MET
254
n
254
MET
254
A
ALA
255
n
255
ALA
255
A
ILE
256
n
256
ILE
256
A
GLY
257
n
257
GLY
257
A
MET
258
n
258
MET
258
A
LYS
259
n
259
LYS
259
A
ASP
260
n
260
ASP
260
A
LYS
261
n
261
LYS
261
A
LEU
262
n
262
LEU
262
A
LEU
263
n
263
LEU
263
A
GLY
264
n
264
GLY
264
A
PRO
265
n
265
PRO
265
A
ASP
266
n
266
ASP
266
A
VAL
267
n
267
VAL
267
A
MET
268
n
268
MET
268
A
TYR
269
n
269
TYR
269
A
PRO
270
n
270
PRO
270
A
MET
271
n
271
MET
271
A
LYS
272
n
272
LYS
272
A
ALA
273
n
273
ALA
273
A
LEU
274
n
274
LEU
274
A
ILE
275
n
275
ILE
275
A
ASN
276
n
276
ASN
276
A
GLY
277
n
277
GLY
277
A
CYS
278
n
278
CYS
278
A
PRO
279
n
279
PRO
279
A
GLU
280
n
280
GLU
280
A
PRO
281
n
281
PRO
281
A
LEU
282
n
282
LEU
282
A
GLU
283
n
283
GLU
283
A
ILE
284
n
284
ILE
284
A
ALA
285
n
285
ALA
285
A
ASP
286
n
286
ASP
286
A
ALA
287
n
287
ALA
287
A
GLY
288
n
288
GLY
288
A
HIS
289
n
289
HIS
289
A
PHE
290
n
290
PHE
290
A
VAL
291
n
291
VAL
291
A
GLN
292
n
292
GLN
292
A
GLU
293
n
293
GLU
293
A
PHE
294
n
294
PHE
294
A
GLY
295
n
295
GLY
295
A
GLU
296
n
296
GLU
296
A
GLN
297
n
297
GLN
297
A
VAL
298
n
298
VAL
298
A
ALA
299
n
299
ALA
299
A
ARG
300
n
300
ARG
300
A
GLU
301
n
301
GLU
301
A
ALA
302
n
302
ALA
302
A
LEU
303
n
303
LEU
303
A
LYS
304
n
304
LYS
304
A
HIS
305
n
305
HIS
305
A
PHE
306
n
306
PHE
306
A
ALA
307
n
307
ALA
307
A
GLU
308
n
308
GLU
308
A
THR
309
n
309
THR
309
A
GLU
310
n
310
GLU
310
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
ASN
14
-110.88
56.11
1
A
PRO
57
-118.67
63.55
1
A
THR
58
-111.22
-161.10
1
A
GLN
123
-173.64
138.27
1
A
ASP
124
56.54
-126.37
1
A
ASP
137
-171.14
76.19
1
A
ASN
148
3.19
85.94
1
A
CYS
150
-162.59
-159.19
1
A
ASN
249
-140.71
42.04
1
A
LEU
262
-101.56
-61.06
PARHCSDX.PRO
TOPHCSDX.PRO
PARAM19.WAT
TOPH19.SOL
B-FACTORS WERE TAKEN FROM 2HAD AND KEPT CONSTANT DURING REFINEMENT
0.2530000
0.1930000
0.1930000
2.6
20.
412
7730
5.0
82.8
RANDOM
100000.0
0.0001
1
THROUGHOUT, EXCEPT LAST STEP IN WHICH ALL DATA (WORK+TEST SET) WERE USED
0
PDB ENTRY 2HAD
0.29
2.6
20.
82
2558
0
0
2476
0.007
1.4
23.6
1.2
0.3000000
2.72
917
8
81.0
28.5
2.60
32
1BEE
7742
3
0.0810000
1
9
1.7
83
2.60
2.67
0.2770000
1.7
81
model building
X-PLOR
3.843
refinement
X-PLOR
3.843
data reduction
MADNES
data scaling
BIOMOL
phasing
X-PLOR
3.843
HALOALKANE DEHALOGENASE MUTANT WITH TRP 175 REPLACED BY TYR
1
N
N
2
N
N
A
SER
60
A
SER
60
HELX_P
A
SER
73
A
SER
73
1
1
14
A
PHE
99
A
PHE
99
HELX_P
A
LEU
113
A
LEU
113
1
2
15
A
TRP
125
A
TRP
125
HELX_P
A
ALA
136
A
ALA
136
5
3
12
A
PRO
159
A
PRO
159
HELX_P
A
THR
166
A
THR
166
5
4
8
A
GLY
171
A
GLY
171
HELX_P
A
THR
181
A
THR
181
1
5
11
A
LEU
187
A
LEU
187
HELX_P
A
TRP
194
A
TRP
194
1
6
8
A
GLU
200
A
GLU
200
HELX_P
A
ALA
208
A
ALA
208
1
7
9
A
ALA
217
A
ALA
217
HELX_P
A
ALA
227
A
ALA
227
1
8
11
A
GLN
231
A
GLN
231
HELX_P
A
ASP
247
A
ASP
247
1
9
17
A
GLY
264
A
GLY
264
HELX_P
A
LEU
274
A
LEU
274
1
10
11
A
VAL
291
A
VAL
291
HELX_P
A
GLU
308
A
GLU
308
5
11
18
DEHALOGENASE
DEHALOGENASE, ALPHA/BETA-HYDROLASE
A
GLU
56
A
GLU
56
1
A
PRO
57
A
PRO
57
-0.07
A
GLN
167
A
GLN
167
1
A
PRO
168
A
PRO
168
0.13
DHLA_XANAU
UNP
1
1
P22643
MINAIRTPDQRFSNLDQYPFSPNYLDDLPGYPGLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAP
DFFGFGKSDKPVDEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPA
FSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEA
ISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAETE
1
310
1BEE
1
310
P22643
A
1
1
310
1
ILE
cloning artifact
VAL
2
1BEE
A
P22643
UNP
2
2
1
TRP
engineered mutation
TYR
175
1BEE
A
P22643
UNP
175
175
2
8
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
A
ASN
3
A
ASN
3
A
ILE
5
A
ILE
5
A
LYS
90
A
LYS
90
A
VAL
92
A
VAL
92
A
ASN
23
A
ASN
23
A
LEU
25
A
LEU
25
A
ALA
36
A
ALA
36
A
GLU
41
A
GLU
41
A
ARG
76
A
ARG
76
A
ASP
81
A
ASP
81
A
ASP
48
A
ASP
48
A
LEU
53
A
LEU
53
A
ILE
118
A
ILE
118
A
VAL
122
A
VAL
122
A
PHE
141
A
PHE
141
A
MET
147
A
MET
147
A
GLN
251
A
GLN
251
A
GLY
257
A
GLY
257
A
LEU
282
A
LEU
282
A
ILE
284
A
ILE
284
18
P 21 21 2