0.017705
0.010222
0.000000
0.000000
0.020444
0.000000
0.000000
0.000000
0.005483
0.00000
0.00000
0.00000
Mcdonald, N.Q.
Lapatto, R.
Murray-Rust, J.
Gunning, J.
Wlodawer, A.
Blundell, T.L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
56.480
56.480
182.390
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Nature
NATUAS
0006
0028-0836
354
411
414
10.1038/354411a0
1956407
New protein fold revealed by a 2.3-A resolution crystal structure of nerve growth factor.
1991
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
11992.542
BETA-NERVE GROWTH FACTOR
1
man
polymer
18.015
water
32
nat
water
no
no
GEFSVCDSVSVWVGDKTTATDIKGKEVTVLAEVNINNSVFRQYFFETKCRASNPVESGCRGIDSKHWNSYCTTTHTFVKA
LTTDEKQAAWRFIRIDTACVCVLSRKA
GEFSVCDSVSVWVGDKTTATDIKGKEVTVLAEVNINNSVFRQYFFETKCRASNPVESGCRGIDSKHWNSYCTTTHTFVKA
LTTDEKQAAWRFIRIDTACVCVLSRKA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
sample
10090
Mus musculus
3.50
64.87
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
1
0
1994-05-31
1
1
2008-03-24
1
2
2011-07-13
Y
1993-04-08
REL
HOH
water
HOH
1
2
HOH
HOH
117
A
HOH
2
2
HOH
HOH
118
A
HOH
3
2
HOH
HOH
119
A
HOH
5
2
HOH
HOH
120
A
HOH
6
2
HOH
HOH
121
A
HOH
8
2
HOH
HOH
122
A
HOH
10
2
HOH
HOH
123
A
HOH
11
2
HOH
HOH
124
A
HOH
13
2
HOH
HOH
125
A
HOH
14
2
HOH
HOH
126
A
HOH
15
2
HOH
HOH
127
A
HOH
20
2
HOH
HOH
128
A
HOH
21
2
HOH
HOH
129
A
HOH
22
2
HOH
HOH
130
A
HOH
23
2
HOH
HOH
131
A
HOH
30
2
HOH
HOH
132
A
HOH
31
2
HOH
HOH
133
A
HOH
32
2
HOH
HOH
134
A
HOH
33
2
HOH
HOH
135
A
HOH
34
2
HOH
HOH
136
A
HOH
36
2
HOH
HOH
137
A
HOH
37
2
HOH
HOH
138
A
HOH
38
2
HOH
HOH
139
A
HOH
39
2
HOH
HOH
140
A
HOH
40
2
HOH
HOH
141
A
HOH
41
2
HOH
HOH
142
A
HOH
42
2
HOH
HOH
143
A
HOH
43
2
HOH
HOH
144
A
HOH
44
2
HOH
HOH
145
A
HOH
45
2
HOH
HOH
146
A
HOH
46
2
HOH
HOH
147
A
HOH
47
2
HOH
HOH
148
A
GLY
10
n
1
GLY
10
A
GLU
11
n
2
GLU
11
A
PHE
12
n
3
PHE
12
A
SER
13
n
4
SER
13
A
VAL
14
n
5
VAL
14
A
CYS
15
n
6
CYS
15
A
ASP
16
n
7
ASP
16
A
SER
17
n
8
SER
17
A
VAL
18
n
9
VAL
18
A
SER
19
n
10
SER
19
A
VAL
20
n
11
VAL
20
A
TRP
21
n
12
TRP
21
A
VAL
22
n
13
VAL
22
A
GLY
23
n
14
GLY
23
A
ASP
24
n
15
ASP
24
A
LYS
25
n
16
LYS
25
A
THR
26
n
17
THR
26
A
THR
27
n
18
THR
27
A
ALA
28
n
19
ALA
28
A
THR
29
n
20
THR
29
A
ASP
30
n
21
ASP
30
A
ILE
31
n
22
ILE
31
A
LYS
32
n
23
LYS
32
A
GLY
33
n
24
GLY
33
A
LYS
34
n
25
LYS
34
A
GLU
35
n
26
GLU
35
A
VAL
36
n
27
VAL
36
A
THR
37
n
28
THR
37
A
VAL
38
n
29
VAL
38
A
LEU
39
n
30
LEU
39
A
ALA
40
n
31
ALA
40
A
GLU
41
n
32
GLU
41
A
VAL
42
n
33
VAL
42
A
ASN
43
n
34
ASN
43
A
ILE
44
n
35
ILE
44
A
ASN
45
n
36
ASN
45
A
ASN
46
n
37
ASN
46
A
SER
47
n
38
SER
47
A
VAL
48
n
39
VAL
48
A
PHE
49
n
40
PHE
49
A
ARG
50
n
41
ARG
50
A
GLN
51
n
42
GLN
51
A
TYR
52
n
43
TYR
52
A
PHE
53
n
44
PHE
53
A
PHE
54
n
45
PHE
54
A
GLU
55
n
46
GLU
55
A
THR
56
n
47
THR
56
A
LYS
57
n
48
LYS
57
A
CYS
58
n
49
CYS
58
A
ARG
59
n
50
ARG
59
A
ALA
60
n
51
ALA
60
A
SER
61
n
52
SER
61
A
ASN
62
n
53
ASN
62
A
PRO
63
n
54
PRO
63
A
VAL
64
n
55
VAL
64
A
GLU
65
n
56
GLU
65
A
SER
66
n
57
SER
66
A
GLY
67
n
58
GLY
67
A
CYS
68
n
59
CYS
68
A
ARG
69
n
60
ARG
69
A
GLY
70
n
61
GLY
70
A
ILE
71
n
62
ILE
71
A
ASP
72
n
63
ASP
72
A
SER
73
n
64
SER
73
A
LYS
74
n
65
LYS
74
A
HIS
75
n
66
HIS
75
A
TRP
76
n
67
TRP
76
A
ASN
77
n
68
ASN
77
A
SER
78
n
69
SER
78
A
TYR
79
n
70
TYR
79
A
CYS
80
n
71
CYS
80
A
THR
81
n
72
THR
81
A
THR
82
n
73
THR
82
A
THR
83
n
74
THR
83
A
HIS
84
n
75
HIS
84
A
THR
85
n
76
THR
85
A
PHE
86
n
77
PHE
86
A
VAL
87
n
78
VAL
87
A
LYS
88
n
79
LYS
88
A
ALA
89
n
80
ALA
89
A
LEU
90
n
81
LEU
90
A
THR
91
n
82
THR
91
A
THR
92
n
83
THR
92
A
ASP
93
n
84
ASP
93
A
GLU
94
n
85
GLU
94
A
LYS
95
n
86
LYS
95
A
GLN
96
n
87
GLN
96
A
ALA
97
n
88
ALA
97
A
ALA
98
n
89
ALA
98
A
TRP
99
n
90
TRP
99
A
ARG
100
n
91
ARG
100
A
PHE
101
n
92
PHE
101
A
ILE
102
n
93
ILE
102
A
ARG
103
n
94
ARG
103
A
ILE
104
n
95
ILE
104
A
ASP
105
n
96
ASP
105
A
THR
106
n
97
THR
106
A
ALA
107
n
98
ALA
107
A
CYS
108
n
99
CYS
108
A
VAL
109
n
100
VAL
109
A
CYS
110
n
101
CYS
110
A
VAL
111
n
102
VAL
111
A
LEU
112
n
103
LEU
112
A
SER
113
n
104
SER
113
A
ARG
114
n
105
ARG
114
A
LYS
115
n
106
LYS
115
A
ALA
116
n
107
ALA
116
A
author_and_software_defined_assembly
PISA,PQS
2
dimeric
2740
-22
11610
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.5000000000
-0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
10_665
-y+1,-x+1,-z+1/6
crystal symmetry operation
28.2400000000
48.9131148057
30.3983333333
1
-9.98
1.50
110.50
100.52
A
A
A
N
CA
CB
SER
SER
SER
17
17
17
N
1
6.29
0.80
106.30
112.59
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
21
21
21
N
1
-5.98
0.80
107.30
101.32
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
21
21
21
N
1
-15.37
2.20
111.50
96.13
A
A
A
N
CA
CB
VAL
VAL
VAL
36
36
36
N
1
3.44
0.50
120.30
123.74
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
50
50
50
N
1
-4.75
0.50
120.30
115.55
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
50
50
50
N
1
3.59
0.50
120.30
123.89
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
59
59
59
N
1
6.51
0.80
106.30
112.81
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
76
76
76
N
1
-5.76
0.80
107.30
101.54
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
76
76
76
N
1
7.72
0.80
106.30
114.02
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
99
99
99
N
1
-5.86
0.80
107.30
101.44
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
99
99
99
N
1
4.05
0.50
120.30
124.35
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
100
100
100
N
1
4.48
0.50
120.30
124.78
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
103
103
103
N
1
A
A
NE2
CD2
HIS
HIS
75
75
-0.071
0.011
1.373
1.302
N
1
A
A
NE2
CD2
HIS
HIS
84
84
-0.068
0.011
1.373
1.305
N
1
A
ASN
45
43.52
78.46
1
A
ASN
46
54.78
13.03
THERE IS VERY POOR ELECTRON DENSITY FOR THE ASN 43 - SER 47
LOOP. THERE IS NO FITTABLE DENSITY FOR RESIDUES 1 - 9 OR
FOR THE C-TERMINUS.
0.22
0.22
2.3
8.
1
2.3
8.
32
872
0
0
840
model building
X-PLOR
refinement
RESTRAIN
refinement
X-PLOR
phasing
X-PLOR
BETA-NERVE GROWTH FACTOR
NEW PROTEIN FOLD REVEALED BY A 2.3 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF NERVE GROWTH FACTOR
1
N
N
2
N
N
disulf
1.998
A
CYS
15
A
SG
CYS
6
1_555
A
CYS
80
A
SG
CYS
71
1_555
disulf
2.016
A
CYS
58
A
SG
CYS
49
1_555
A
CYS
108
A
SG
CYS
99
1_555
disulf
2.012
A
CYS
68
A
SG
CYS
59
1_555
A
CYS
110
A
SG
CYS
101
1_555
GROWTH FACTOR
GROWTH FACTOR
NGF_MOUSE
UNP
1
1
P01139
MSMLFYTLITAFLIGVQAEPYTDSNVPEGDSVPEAHWTKLQHSLDTALRRARSAPTAPIAARVTGQTRNITVDPRLFKKR
RLHSPRVLFSTQPPPTSSDTLDLDFQAHGTIPFNRTHRSKRSSTHPVFHMGEFSVCDSVSVWVGDKTTATDIKGKEVTVL
AEVNINNSVFRQYFFETKCRASNPVESGCRGIDSKHWNSYCTTTHTFVKALTTDEKQAAWRFIRIDTACVCVLSRKATRR
G
131
237
1BET
10
116
P01139
A
1
1
107
2
2
2
anti-parallel
anti-parallel
anti-parallel
A
ASP
16
A
ASP
7
A
VAL
22
A
VAL
13
A
PHE
53
A
PHE
44
A
ARG
59
A
ARG
50
A
THR
26
A
THR
17
A
THR
29
A
THR
20
A
LYS
34
A
LYS
25
A
VAL
38
A
VAL
29
A
ASN
77
A
ASN
68
A
ASP
93
A
ASP
84
A
ALA
97
A
ALA
88
A
SER
113
A
SER
104
179
P 65 2 2