0.011123
0.000000
0.000000
0.000000
0.011123
0.000000
0.000000
0.000000
0.016694
0.00000
0.00000
0.00000
Trinh, C.H.
Phillips, S.E.V.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
89.900
89.900
59.900
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C24 H32 O9
464.505
ESTRIOL 3-(B-D-GLUCURONIDE)
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
UK
Structure
STRUE6
2005
0969-2126
5
937
948
10.1016/S0969-2126(97)00247-5
9261086
Antibody fragment Fv4155 bound to two closely related steroid hormones: the structural basis of fine specificity.
1997
10.2210/pdb1bfv/pdb
pdb_00001bfv
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
MSC DOUBLE FOCUSING MIRRORS
IMAGE PLATE
1996-02
RIGAKU RAXIS IIC
NI FILTER
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RUH2R
12437.998
FV4155
MONOCLONAL ANTIBODY FV FRAGMENT
1
man
polymer
13191.760
FV4155
MONOCLONAL ANTIBODY FV FRAGMENT
1
man
polymer
65.409
ZINC ION
3
syn
non-polymer
464.505
ESTRIOL 3-(B-D-GLUCURONIDE)
1
syn
non-polymer
18.015
water
182
nat
water
no
no
DIELTQSPPSLPVSLGDQVSISCRSSQSLVSNNRRNYLHWYLQKPGQSPKLVIYKVSNRFSGVPDRFSGSGSGTDFTLKI
SRVAAEDLGLYFCSQSSHVPLTFGSGTKLEIKR
DIELTQSPPSLPVSLGDQVSISCRSSQSLVSNNRRNYLHWYLQKPGQSPKLVIYKVSNRFSGVPDRFSGSGSGTDFTLKI
SRVAAEDLGLYFCSQSSHVPLTFGSGTKLEIKR
L
polypeptide(L)
no
no
QVQLQESGGGLVNLGGSMTLSCVASGFTFNTYYMSWVRQTPEKTLELVAAINSDGEPIYYPDTLKGRVTISRDNAKKTLY
LQMSSLNFEDTALYYCARLNYAVYGMDYWGQGTTVTVSS
QVQLQESGGGLVNLGGSMTLSCVASGFTFNTYYMSWVRQTPEKTLELVAAINSDGEPIYYPDTLKGRVTISRDNAKKTLY
LQMSSLNFEDTALYYCARLNYAVYGMDYWGQGTTVTVSS
H
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
Escherichia
sample
10090
Mus musculus
562
Escherichia coli
JM109
house mouse
Mus
Escherichia
sample
10090
Mus musculus
562
Escherichia coli
JM109
1
2.37
48.1
7.5
PROTEIN WAS CRYSTALLIZED FROM 18% (W/V) PEG 8000, 200MM ZN ACETATE AND 100MM NA CACODYLATE, PH 7.5
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Refinement description
1
0
1997-12-03
1
1
2008-03-24
1
2
2011-07-13
1
3
2023-08-02
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_symmetry
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1997-05-27
REL
REL
ZN
ZINC ION
STG
ESTRIOL 3-(B-D-GLUCURONIDE)
HOH
water
1NBV
PDB ENTRY 1NBV
PDB
experimental model
ZN
200
3
ZN
ZN
200
L
ZN
201
3
ZN
ZN
201
L
ZN
201
3
ZN
ZN
201
H
STG
200
4
STG
STG
200
H
HOH
300
5
HOH
HOH
202
L
HOH
301
5
HOH
HOH
203
L
HOH
302
5
HOH
HOH
204
L
HOH
303
5
HOH
HOH
205
L
HOH
304
5
HOH
HOH
206
L
HOH
305
5
HOH
HOH
207
L
HOH
306
5
HOH
HOH
208
L
HOH
307
5
HOH
HOH
209
L
HOH
309
5
HOH
HOH
210
L
HOH
310
5
HOH
HOH
211
L
HOH
311
5
HOH
HOH
212
L
HOH
312
5
HOH
HOH
213
L
HOH
313
5
HOH
HOH
214
L
HOH
314
5
HOH
HOH
215
L
HOH
315
5
HOH
HOH
216
L
HOH
316
5
HOH
HOH
217
L
HOH
317
5
HOH
HOH
218
L
HOH
318
5
HOH
HOH
219
L
HOH
319
5
HOH
HOH
220
L
HOH
320
5
HOH
HOH
221
L
HOH
321
5
HOH
HOH
222
L
HOH
322
5
HOH
HOH
223
L
HOH
324
5
HOH
HOH
224
L
HOH
325
5
HOH
HOH
225
L
HOH
326
5
HOH
HOH
226
L
HOH
327
5
HOH
HOH
227
L
HOH
328
5
HOH
HOH
228
L
HOH
329
5
HOH
HOH
229
L
HOH
330
5
HOH
HOH
230
L
HOH
331
5
HOH
HOH
231
L
HOH
332
5
HOH
HOH
232
L
HOH
333
5
HOH
HOH
233
L
HOH
334
5
HOH
HOH
234
L
HOH
335
5
HOH
HOH
235
L
HOH
337
5
HOH
HOH
236
L
HOH
338
5
HOH
HOH
237
L
HOH
339
5
HOH
HOH
238
L
HOH
340
5
HOH
HOH
239
L
HOH
341
5
HOH
HOH
240
L
HOH
342
5
HOH
HOH
241
L
HOH
343
5
HOH
HOH
242
L
HOH
344
5
HOH
HOH
243
L
HOH
345
5
HOH
HOH
244
L
HOH
346
5
HOH
HOH
245
L
HOH
347
5
HOH
HOH
246
L
HOH
348
5
HOH
HOH
247
L
HOH
349
5
HOH
HOH
248
L
HOH
350
5
HOH
HOH
249
L
HOH
351
5
HOH
HOH
250
L
HOH
352
5
HOH
HOH
251
L
HOH
353
5
HOH
HOH
252
L
HOH
354
5
HOH
HOH
253
L
HOH
355
5
HOH
HOH
254
L
HOH
356
5
HOH
HOH
255
L
HOH
357
5
HOH
HOH
256
L
HOH
358
5
HOH
HOH
257
L
HOH
359
5
HOH
HOH
258
L
HOH
360
5
HOH
HOH
259
L
HOH
361
5
HOH
HOH
260
L
HOH
362
5
HOH
HOH
261
L
HOH
363
5
HOH
HOH
262
L
HOH
364
5
HOH
HOH
263
L
HOH
365
5
HOH
HOH
264
L
HOH
366
5
HOH
HOH
265
L
HOH
367
5
HOH
HOH
266
L
HOH
368
5
HOH
HOH
267
L
HOH
369
5
HOH
HOH
268
L
HOH
370
5
HOH
HOH
269
L
HOH
371
5
HOH
HOH
270
L
HOH
373
5
HOH
HOH
271
L
HOH
374
5
HOH
HOH
272
L
HOH
375
5
HOH
HOH
273
L
HOH
376
5
HOH
HOH
274
L
HOH
377
5
HOH
HOH
275
L
HOH
378
5
HOH
HOH
276
L
HOH
379
5
HOH
HOH
277
L
HOH
380
5
HOH
HOH
278
L
HOH
381
5
HOH
HOH
279
L
HOH
382
5
HOH
HOH
280
L
HOH
383
5
HOH
HOH
281
L
HOH
384
5
HOH
HOH
282
L
HOH
385
5
HOH
HOH
283
L
HOH
386
5
HOH
HOH
284
L
HOH
388
5
HOH
HOH
285
L
HOH
389
5
HOH
HOH
286
L
HOH
371
5
HOH
HOH
287
L
HOH
308
5
HOH
HOH
202
H
HOH
323
5
HOH
HOH
203
H
HOH
336
5
HOH
HOH
204
H
HOH
372
5
HOH
HOH
205
H
HOH
387
5
HOH
HOH
206
H
HOH
300
5
HOH
HOH
207
H
HOH
301
5
HOH
HOH
208
H
HOH
302
5
HOH
HOH
209
H
HOH
303
5
HOH
HOH
210
H
HOH
304
5
HOH
HOH
211
H
HOH
305
5
HOH
HOH
212
H
HOH
306
5
HOH
HOH
213
H
HOH
307
5
HOH
HOH
214
H
HOH
308
5
HOH
HOH
215
H
HOH
309
5
HOH
HOH
216
H
HOH
310
5
HOH
HOH
217
H
HOH
311
5
HOH
HOH
218
H
HOH
312
5
HOH
HOH
219
H
HOH
313
5
HOH
HOH
220
H
HOH
314
5
HOH
HOH
221
H
HOH
315
5
HOH
HOH
222
H
HOH
316
5
HOH
HOH
223
H
HOH
317
5
HOH
HOH
224
H
HOH
318
5
HOH
HOH
225
H
HOH
319
5
HOH
HOH
226
H
HOH
320
5
HOH
HOH
227
H
HOH
321
5
HOH
HOH
228
H
HOH
322
5
HOH
HOH
229
H
HOH
323
5
HOH
HOH
230
H
HOH
324
5
HOH
HOH
231
H
HOH
325
5
HOH
HOH
232
H
HOH
326
5
HOH
HOH
233
H
HOH
327
5
HOH
HOH
234
H
HOH
328
5
HOH
HOH
235
H
HOH
329
5
HOH
HOH
236
H
HOH
330
5
HOH
HOH
237
H
HOH
331
5
HOH
HOH
238
H
HOH
332
5
HOH
HOH
239
H
HOH
333
5
HOH
HOH
240
H
HOH
334
5
HOH
HOH
241
H
HOH
335
5
HOH
HOH
242
H
HOH
336
5
HOH
HOH
243
H
HOH
337
5
HOH
HOH
244
H
HOH
338
5
HOH
HOH
245
H
HOH
339
5
HOH
HOH
246
H
HOH
340
5
HOH
HOH
247
H
HOH
341
5
HOH
HOH
248
H
HOH
342
5
HOH
HOH
249
H
HOH
343
5
HOH
HOH
250
H
HOH
344
5
HOH
HOH
251
H
HOH
345
5
HOH
HOH
252
H
HOH
346
5
HOH
HOH
253
H
HOH
347
5
HOH
HOH
254
H
HOH
348
5
HOH
HOH
255
H
HOH
349
5
HOH
HOH
256
H
HOH
350
5
HOH
HOH
257
H
HOH
351
5
HOH
HOH
258
H
HOH
352
5
HOH
HOH
259
H
HOH
353
5
HOH
HOH
260
H
HOH
354
5
HOH
HOH
261
H
HOH
355
5
HOH
HOH
262
H
HOH
356
5
HOH
HOH
263
H
HOH
357
5
HOH
HOH
264
H
HOH
358
5
HOH
HOH
265
H
HOH
359
5
HOH
HOH
266
H
HOH
360
5
HOH
HOH
267
H
HOH
361
5
HOH
HOH
268
H
HOH
362
5
HOH
HOH
269
H
HOH
363
5
HOH
HOH
270
H
HOH
364
5
HOH
HOH
271
H
HOH
365
5
HOH
HOH
272
H
HOH
366
5
HOH
HOH
273
H
HOH
367
5
HOH
HOH
274
H
HOH
368
5
HOH
HOH
275
H
HOH
369
5
HOH
HOH
276
H
HOH
370
5
HOH
HOH
277
H
HOH
372
5
HOH
HOH
278
H
HOH
373
5
HOH
HOH
279
H
HOH
374
5
HOH
HOH
280
H
HOH
375
5
HOH
HOH
281
H
HOH
376
5
HOH
HOH
282
H
HOH
377
5
HOH
HOH
283
H
HOH
378
5
HOH
HOH
284
H
HOH
379
5
HOH
HOH
285
H
HOH
380
5
HOH
HOH
286
H
HOH
381
5
HOH
HOH
287
H
HOH
382
5
HOH
HOH
288
H
HOH
383
5
HOH
HOH
289
H
HOH
384
5
HOH
HOH
290
H
HOH
385
5
HOH
HOH
291
H
HOH
386
5
HOH
HOH
292
H
HOH
387
5
HOH
HOH
293
H
HOH
388
5
HOH
HOH
294
H
HOH
389
5
HOH
HOH
295
H
HOH
390
5
HOH
HOH
296
H
HOH
391
5
HOH
HOH
297
H
ASP
1
n
1
ASP
1
L
ILE
2
n
2
ILE
2
L
GLU
3
n
3
GLU
3
L
LEU
4
n
4
LEU
4
L
THR
5
n
5
THR
5
L
GLN
6
n
6
GLN
6
L
SER
7
n
7
SER
7
L
PRO
8
n
8
PRO
8
L
PRO
9
n
9
PRO
9
L
SER
10
n
10
SER
10
L
LEU
11
n
11
LEU
11
L
PRO
12
n
12
PRO
12
L
VAL
13
n
13
VAL
13
L
SER
14
n
14
SER
14
L
LEU
15
n
15
LEU
15
L
GLY
16
n
16
GLY
16
L
ASP
17
n
17
ASP
17
L
GLN
18
n
18
GLN
18
L
VAL
19
n
19
VAL
19
L
SER
20
n
20
SER
20
L
ILE
21
n
21
ILE
21
L
SER
22
n
22
SER
22
L
CYS
23
n
23
CYS
23
L
ARG
24
n
24
ARG
24
L
SER
25
n
25
SER
25
L
SER
26
n
26
SER
26
L
GLN
27
n
27
GLN
27
L
SER
28
n
28
SER
28
L
LEU
29
n
29
LEU
29
L
VAL
30
n
30
VAL
30
L
SER
31
n
31
SER
31
L
ASN
32
n
32
ASN
32
L
ASN
33
n
33
ASN
33
L
ARG
34
n
34
ARG
34
L
ARG
35
n
35
ARG
35
L
ASN
36
n
36
ASN
36
L
TYR
37
n
37
TYR
37
L
LEU
38
n
38
LEU
38
L
HIS
39
n
39
HIS
39
L
TRP
40
n
40
TRP
40
L
TYR
41
n
41
TYR
41
L
LEU
42
n
42
LEU
42
L
GLN
43
n
43
GLN
43
L
LYS
44
n
44
LYS
44
L
PRO
45
n
45
PRO
45
L
GLY
46
n
46
GLY
46
L
GLN
47
n
47
GLN
47
L
SER
48
n
48
SER
48
L
PRO
49
n
49
PRO
49
L
LYS
50
n
50
LYS
50
L
LEU
51
n
51
LEU
51
L
VAL
52
n
52
VAL
52
L
ILE
53
n
53
ILE
53
L
TYR
54
n
54
TYR
54
L
LYS
55
n
55
LYS
55
L
VAL
56
n
56
VAL
56
L
SER
57
n
57
SER
57
L
ASN
58
n
58
ASN
58
L
ARG
59
n
59
ARG
59
L
PHE
60
n
60
PHE
60
L
SER
61
n
61
SER
61
L
GLY
62
n
62
GLY
62
L
VAL
63
n
63
VAL
63
L
PRO
64
n
64
PRO
64
L
ASP
65
n
65
ASP
65
L
ARG
66
n
66
ARG
66
L
PHE
67
n
67
PHE
67
L
SER
68
n
68
SER
68
L
GLY
69
n
69
GLY
69
L
SER
70
n
70
SER
70
L
GLY
71
n
71
GLY
71
L
SER
72
n
72
SER
72
L
GLY
73
n
73
GLY
73
L
THR
74
n
74
THR
74
L
ASP
75
n
75
ASP
75
L
PHE
76
n
76
PHE
76
L
THR
77
n
77
THR
77
L
LEU
78
n
78
LEU
78
L
LYS
79
n
79
LYS
79
L
ILE
80
n
80
ILE
80
L
SER
81
n
81
SER
81
L
ARG
82
n
82
ARG
82
L
VAL
83
n
83
VAL
83
L
ALA
84
n
84
ALA
84
L
ALA
85
n
85
ALA
85
L
GLU
86
n
86
GLU
86
L
ASP
87
n
87
ASP
87
L
LEU
88
n
88
LEU
88
L
GLY
89
n
89
GLY
89
L
LEU
90
n
90
LEU
90
L
TYR
91
n
91
TYR
91
L
PHE
92
n
92
PHE
92
L
CYS
93
n
93
CYS
93
L
SER
94
n
94
SER
94
L
GLN
95
n
95
GLN
95
L
SER
96
n
96
SER
96
L
SER
97
n
97
SER
97
L
HIS
98
n
98
HIS
98
L
VAL
99
n
99
VAL
99
L
PRO
100
n
100
PRO
100
L
LEU
101
n
101
LEU
101
L
THR
102
n
102
THR
102
L
PHE
103
n
103
PHE
103
L
GLY
104
n
104
GLY
104
L
SER
105
n
105
SER
105
L
GLY
106
n
106
GLY
106
L
THR
107
n
107
THR
107
L
LYS
108
n
108
LYS
108
L
LEU
109
n
109
LEU
109
L
GLU
110
n
110
GLU
110
L
ILE
111
n
111
ILE
111
L
LYS
112
n
112
LYS
112
L
ARG
113
n
113
ARG
113
L
GLN
1
n
1
GLN
1
H
VAL
2
n
2
VAL
2
H
GLN
3
n
3
GLN
3
H
LEU
4
n
4
LEU
4
H
GLN
5
n
5
GLN
5
H
GLU
6
n
6
GLU
6
H
SER
7
n
7
SER
7
H
GLY
8
n
8
GLY
8
H
GLY
9
n
9
GLY
9
H
GLY
10
n
10
GLY
10
H
LEU
11
n
11
LEU
11
H
VAL
12
n
12
VAL
12
H
ASN
13
n
13
ASN
13
H
LEU
14
n
14
LEU
14
H
GLY
15
n
15
GLY
15
H
GLY
16
n
16
GLY
16
H
SER
17
n
17
SER
17
H
MET
18
n
18
MET
18
H
THR
19
n
19
THR
19
H
LEU
20
n
20
LEU
20
H
SER
21
n
21
SER
21
H
CYS
22
n
22
CYS
22
H
VAL
23
n
23
VAL
23
H
ALA
24
n
24
ALA
24
H
SER
25
n
25
SER
25
H
GLY
26
n
26
GLY
26
H
PHE
27
n
27
PHE
27
H
THR
28
n
28
THR
28
H
PHE
29
n
29
PHE
29
H
ASN
30
n
30
ASN
30
H
THR
31
n
31
THR
31
H
TYR
32
n
32
TYR
32
H
TYR
33
n
33
TYR
33
H
MET
34
n
34
MET
34
H
SER
35
n
35
SER
35
H
TRP
36
n
36
TRP
36
H
VAL
37
n
37
VAL
37
H
ARG
38
n
38
ARG
38
H
GLN
39
n
39
GLN
39
H
THR
40
n
40
THR
40
H
PRO
41
n
41
PRO
41
H
GLU
42
n
42
GLU
42
H
LYS
43
n
43
LYS
43
H
THR
44
n
44
THR
44
H
LEU
45
n
45
LEU
45
H
GLU
46
n
46
GLU
46
H
LEU
47
n
47
LEU
47
H
VAL
48
n
48
VAL
48
H
ALA
49
n
49
ALA
49
H
ALA
50
n
50
ALA
50
H
ILE
51
n
51
ILE
51
H
ASN
52
n
52
ASN
52
H
SER
53
n
53
SER
53
H
ASP
54
n
54
ASP
54
H
GLY
55
n
55
GLY
55
H
GLU
56
n
56
GLU
56
H
PRO
57
n
57
PRO
57
H
ILE
58
n
58
ILE
58
H
TYR
59
n
59
TYR
59
H
TYR
60
n
60
TYR
60
H
PRO
61
n
61
PRO
61
H
ASP
62
n
62
ASP
62
H
THR
63
n
63
THR
63
H
LEU
64
n
64
LEU
64
H
LYS
65
n
65
LYS
65
H
GLY
66
n
66
GLY
66
H
ARG
67
n
67
ARG
67
H
VAL
68
n
68
VAL
68
H
THR
69
n
69
THR
69
H
ILE
70
n
70
ILE
70
H
SER
71
n
71
SER
71
H
ARG
72
n
72
ARG
72
H
ASP
73
n
73
ASP
73
H
ASN
74
n
74
ASN
74
H
ALA
75
n
75
ALA
75
H
LYS
76
n
76
LYS
76
H
LYS
77
n
77
LYS
77
H
THR
78
n
78
THR
78
H
LEU
79
n
79
LEU
79
H
TYR
80
n
80
TYR
80
H
LEU
81
n
81
LEU
81
H
GLN
82
n
82
GLN
82
H
MET
83
n
83
MET
83
H
SER
84
n
84
SER
84
H
SER
85
n
85
SER
85
H
LEU
86
n
86
LEU
86
H
ASN
87
n
87
ASN
87
H
PHE
88
n
88
PHE
88
H
GLU
89
n
89
GLU
89
H
ASP
90
n
90
ASP
90
H
THR
91
n
91
THR
91
H
ALA
92
n
92
ALA
92
H
LEU
93
n
93
LEU
93
H
TYR
94
n
94
TYR
94
H
TYR
95
n
95
TYR
95
H
CYS
96
n
96
CYS
96
H
ALA
97
n
97
ALA
97
H
ARG
98
n
98
ARG
98
H
LEU
99
n
99
LEU
99
H
ASN
100
n
100
ASN
100
H
TYR
101
n
101
TYR
101
H
ALA
102
n
102
ALA
102
H
VAL
103
n
103
VAL
103
H
TYR
104
n
104
TYR
104
H
GLY
105
n
105
GLY
105
H
MET
106
n
106
MET
106
H
ASP
107
n
107
ASP
107
H
TYR
108
n
108
TYR
108
H
TRP
109
n
109
TRP
109
H
GLY
110
n
110
GLY
110
H
GLN
111
n
111
GLN
111
H
GLY
112
n
112
GLY
112
H
THR
113
n
113
THR
113
H
THR
114
n
114
THR
114
H
VAL
115
n
115
VAL
115
H
THR
116
n
116
THR
116
H
VAL
117
n
117
VAL
117
H
SER
118
n
118
SER
118
H
SER
119
n
119
SER
119
H
0.187
0.271
724
5.
author_and_software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
4
tetrameric
software_defined_assembly
PISA
4
tetrameric
software_defined_assembly
PISA
2
dimeric
2650
-61
10530
8010
-335
18550
3770
-149
22600
1600
-71
11580
L
ASP
1
A
N
ASP
1
1_555
L
ZN
200
C
ZN
ZN
1_555
L
ASP
1
A
O
ASP
1
1_555
73.8
L
ASP
1
A
N
ASP
1
1_555
L
ZN
200
C
ZN
ZN
1_555
L
GLU
3
A
OE2
GLU
3
1_555
153.7
L
ASP
1
A
O
ASP
1
1_555
L
ZN
200
C
ZN
ZN
1_555
L
GLU
3
A
OE2
GLU
3
1_555
86.6
L
ASP
1
A
N
ASP
1
1_555
L
ZN
200
C
ZN
ZN
1_555
L
HOH
257
G
O
HOH
1_555
109.3
L
ASP
1
A
O
ASP
1
1_555
L
ZN
200
C
ZN
ZN
1_555
L
HOH
257
G
O
HOH
1_555
171.9
L
GLU
3
A
OE2
GLU
3
1_555
L
ZN
200
C
ZN
ZN
1_555
L
HOH
257
G
O
HOH
1_555
88.0
L
ASP
1
A
N
ASP
1
1_555
L
ZN
200
C
ZN
ZN
1_555
H
GLU
46
B
OE2
GLU
46
8_666
108.0
L
ASP
1
A
O
ASP
1
1_555
L
ZN
200
C
ZN
ZN
1_555
H
GLU
46
B
OE2
GLU
46
8_666
88.6
L
GLU
3
A
OE2
GLU
3
1_555
L
ZN
200
C
ZN
ZN
1_555
H
GLU
46
B
OE2
GLU
46
8_666
88.5
L
HOH
257
G
O
HOH
1_555
L
ZN
200
C
ZN
ZN
1_555
H
GLU
46
B
OE2
GLU
46
8_666
97.3
L
ASP
1
A
OD1
ASP
1
1_555
L
ZN
201
D
ZN
ZN
1_555
L
ASP
1
A
OD1
ASP
1
8_666
78.5
L
ASP
1
A
OD1
ASP
1
1_555
L
ZN
201
D
ZN
ZN
1_555
L
GLU
3
A
OE1
GLU
3
1_555
72.2
L
ASP
1
A
OD1
ASP
1
8_666
L
ZN
201
D
ZN
ZN
1_555
L
GLU
3
A
OE1
GLU
3
1_555
146.0
L
ASP
1
A
OD1
ASP
1
1_555
L
ZN
201
D
ZN
ZN
1_555
L
GLU
3
A
OE1
GLU
3
8_666
110.2
L
ASP
1
A
OD1
ASP
1
8_666
L
ZN
201
D
ZN
ZN
1_555
L
GLU
3
A
OE1
GLU
3
8_666
81.1
L
GLU
3
A
OE1
GLU
3
1_555
L
ZN
201
D
ZN
ZN
1_555
L
GLU
3
A
OE1
GLU
3
8_666
92.8
L
ASP
1
A
OD1
ASP
1
1_555
L
ZN
201
D
ZN
ZN
1_555
L
HOH
261
G
O
HOH
8_666
153.7
L
ASP
1
A
OD1
ASP
1
8_666
L
ZN
201
D
ZN
ZN
1_555
L
HOH
261
G
O
HOH
8_666
108.5
L
GLU
3
A
OE1
GLU
3
1_555
L
ZN
201
D
ZN
ZN
1_555
L
HOH
261
G
O
HOH
8_666
105.5
L
GLU
3
A
OE1
GLU
3
8_666
L
ZN
201
D
ZN
ZN
1_555
L
HOH
261
G
O
HOH
8_666
96.1
L
HIS
98
A
ND1
HIS
98
8_666
H
ZN
201
E
ZN
ZN
1_555
H
GLU
89
B
OE1
GLU
89
1_555
86.8
L
HIS
98
A
ND1
HIS
98
8_666
H
ZN
201
E
ZN
ZN
1_555
H
GLU
89
B
OE2
GLU
89
1_555
93.8
H
GLU
89
B
OE1
GLU
89
1_555
H
ZN
201
E
ZN
ZN
1_555
H
GLU
89
B
OE2
GLU
89
1_555
54.2
L
HIS
98
A
ND1
HIS
98
8_666
H
ZN
201
E
ZN
ZN
1_555
H
HOH
275
H
O
HOH
1_555
119.1
H
GLU
89
B
OE1
GLU
89
1_555
H
ZN
201
E
ZN
ZN
1_555
H
HOH
275
H
O
HOH
1_555
135.7
H
GLU
89
B
OE2
GLU
89
1_555
H
ZN
201
E
ZN
ZN
1_555
H
HOH
275
H
O
HOH
1_555
143.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
8_666
-y+1,-x+1,-z+1
crystal symmetry operation
89.9000000000
89.9000000000
59.9000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
8_665
-y+1,-x+1,-z
crystal symmetry operation
89.9000000000
89.9000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_554
x,y,z-1
crystal symmetry operation
0.0000000000
0.0000000000
-59.9000000000
L
O
THR
5
A
O
THR
5
L
N
ARG
24
A
N
ARG
24
L
O
VAL
19
A
O
VAL
19
L
N
ILE
80
A
N
ILE
80
L
O
ASP
75
A
O
ASP
75
L
N
SER
72
A
N
SER
72
L
O
LEU
11
A
O
LEU
11
L
N
LYS
108
A
N
LYS
108
L
O
THR
107
A
O
THR
107
L
N
TYR
91
A
N
TYR
91
L
O
LEU
90
A
O
LEU
90
L
N
GLN
43
A
N
GLN
43
L
O
TRP
40
A
O
TRP
40
L
N
ILE
53
A
N
ILE
53
H
O
GLN
3
B
O
GLN
3
H
N
SER
25
B
N
SER
25
H
O
MET
18
B
O
MET
18
H
N
MET
83
B
N
MET
83
H
O
THR
78
B
O
THR
78
H
N
ASP
73
B
N
ASP
73
H
O
GLY
10
B
O
GLY
10
H
N
THR
116
B
N
THR
116
H
O
THR
113
B
O
THR
113
H
N
TYR
94
B
N
TYR
94
H
O
LEU
93
B
O
LEU
93
H
N
GLN
39
B
N
GLN
39
H
O
MET
34
B
O
MET
34
H
N
ILE
51
B
N
ILE
51
H
O
ALA
50
B
O
ALA
50
H
N
TYR
59
B
N
TYR
59
1
L
HOH
202
G
HOH
1
L
HOH
205
G
HOH
1
L
HOH
286
G
HOH
1
L
CG
ARG
113
A
CG
ARG
113
1
Y
1
L
CD
ARG
113
A
CD
ARG
113
1
Y
1
L
NE
ARG
113
A
NE
ARG
113
1
Y
1
L
CZ
ARG
113
A
CZ
ARG
113
1
Y
1
L
NH1
ARG
113
A
NH1
ARG
113
1
Y
1
L
NH2
ARG
113
A
NH2
ARG
113
1
Y
1
H
ARG
38
0.107
SIDE CHAIN
1
H
ARG
67
0.114
SIDE CHAIN
1
9.96
1.40
123.60
133.56
L
L
L
CD
NE
CZ
ARG
ARG
ARG
24
24
24
N
1
4.04
0.50
120.30
124.34
L
L
L
NE
CZ
NH1
ARG
ARG
ARG
24
24
24
N
1
-3.11
0.50
120.30
117.19
L
L
L
NE
CZ
NH2
ARG
ARG
ARG
35
35
35
N
1
17.17
2.20
113.40
130.57
L
L
L
CA
CB
CG
GLU
GLU
GLU
86
86
86
N
1
6.30
0.50
120.30
126.60
H
H
H
NE
CZ
NH1
ARG
ARG
ARG
38
38
38
N
1
5.75
0.90
118.30
124.05
H
H
H
CB
CG
OD1
ASP
ASP
ASP
62
62
62
N
1
11.85
1.40
123.60
135.45
H
H
H
CD
NE
CZ
ARG
ARG
ARG
67
67
67
N
1
-3.44
0.50
120.30
116.86
H
H
H
NE
CZ
NH2
ARG
ARG
ARG
67
67
67
N
1
-3.40
0.50
120.30
116.90
H
H
H
NE
CZ
NH2
ARG
ARG
ARG
72
72
72
N
1
13.91
2.00
110.40
124.31
H
H
H
CB
CA
C
ASN
ASN
ASN
87
87
87
N
1
5.37
0.50
120.30
125.67
H
H
H
NE
CZ
NH1
ARG
ARG
ARG
98
98
98
N
1
L
VAL
56
69.95
-53.80
21.89
VAL L 56 HAS DIHEDRAL ANGLES WHICH LIE OUTSIDE THEIR
EXPECTED RANGE IN THE GAMMA QUADRANT OF THE
RAMACHANDRAN PLOT.
0.271
0.187
2.1
10.0
724
14473
13749
5.
98.42
RANDOM
1
THROUGHOUT
0.
MOLECULAR REPLACEMENT
PDB ENTRY 1NBV
2.1
10.0
182
2012
36
0
1794
0.011
0.020
0.037
0.040
0.039
0.050
0.000
0.050
1.562
2.000
2.435
2.500
5.789
5.000
7.872
6.000
0.012
0.020
0.109
0.120
0.174
0.300
0.193
0.300
0.175
0.300
3.879
20.000
14.647
20.000
22.008
20.000
0.000
20.000
2.1
20.
1BFV
14834
3.
0.074
1
9.53
8.8
99.8
2.10
2.17
3.1
0.243
8.9
99.5
data reduction
MOSFLM
data reduction
ROTAVATA
phasing
AMoRE
refinement
PROLSQ
data scaling
CCP4
(ROTAVATA)
MONOCLONAL ANTIBODY FRAGMENT FV4155 FROM E. COLI
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
4
N
N
5
N
N
5
N
N
L
ALA
85
A
ALA
85
HELX_P
L
ASP
87
A
ASP
87
5
1
3
H
PHE
29
B
PHE
29
HELX_P
H
THR
31
B
THR
31
5
2
3
H
PHE
88
B
PHE
88
HELX_P
H
ASP
90
B
ASP
90
5
3
3
disulf
2.068
L
CYS
23
A
SG
CYS
23
1_555
L
CYS
93
A
SG
CYS
93
1_555
disulf
2.064
H
CYS
22
B
SG
CYS
22
1_555
H
CYS
96
B
SG
CYS
96
1_555
metalc
2.280
L
ASP
1
A
N
ASP
1
1_555
L
ZN
200
C
ZN
ZN
1_555
metalc
2.164
L
ASP
1
A
O
ASP
1
1_555
L
ZN
200
C
ZN
ZN
1_555
metalc
2.508
L
ASP
1
A
OD1
ASP
1
1_555
L
ZN
201
D
ZN
ZN
1_555
metalc
2.006
L
ASP
1
A
OD1
ASP
1
8_666
L
ZN
201
D
ZN
ZN
1_555
metalc
2.145
L
GLU
3
A
OE2
GLU
3
1_555
L
ZN
200
C
ZN
ZN
1_555
metalc
1.944
L
GLU
3
A
OE1
GLU
3
1_555
L
ZN
201
D
ZN
ZN
1_555
metalc
2.089
L
GLU
3
A
OE1
GLU
3
8_666
L
ZN
201
D
ZN
ZN
1_555
metalc
2.517
L
HIS
98
A
ND1
HIS
98
8_666
H
ZN
201
E
ZN
ZN
1_555
metalc
2.232
L
ZN
200
C
ZN
ZN
1_555
L
HOH
257
G
O
HOH
1_555
metalc
2.127
L
ZN
200
C
ZN
ZN
1_555
H
GLU
46
B
OE2
GLU
46
8_666
metalc
2.131
L
ZN
201
D
ZN
ZN
1_555
L
HOH
261
G
O
HOH
8_666
metalc
2.256
H
GLU
89
B
OE1
GLU
89
1_555
H
ZN
201
E
ZN
ZN
1_555
metalc
2.575
H
GLU
89
B
OE2
GLU
89
1_555
H
ZN
201
E
ZN
ZN
1_555
metalc
2.698
H
ZN
201
E
ZN
ZN
1_555
H
HOH
275
H
O
HOH
1_555
IMMUNOGLOBULIN
IMMUNOGLOBULIN, FV FRAGMENT, STEROID HORMONE, FINE SPECIFICITY
L
SER
7
A
SER
7
1
L
PRO
8
A
PRO
8
-6.38
L
VAL
99
A
VAL
99
1
L
PRO
100
A
PRO
100
-0.72
KV2G_MOUSE
UNP
1
1
P01631
DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLNWYLQKAGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKI
SRVEAEDLGIYFCSQTTHVPPTFGGGTKLEIKR
1BFV
PDB
2
1BFV
1
113
1BFV
1
113
P01631
L
1
1
113
1
119
1BFV
1
119
1BFV
H
2
1
119
1
VAL
conflict
ILE
2
1BFV
L
P01631
UNP
2
2
1
VAL
conflict
GLU
3
1BFV
L
P01631
UNP
3
3
1
MET
conflict
LEU
4
1BFV
L
P01631
UNP
4
4
1
THR
conflict
SER
7
1BFV
L
P01631
UNP
7
7
1
LEU
conflict
PRO
9
1BFV
L
P01631
UNP
9
9
1
ALA
conflict
VAL
19
1BFV
L
P01631
UNP
19
19
1
HIS
conflict
SER
31
1BFV
L
P01631
UNP
31
31
1
SER
conflict
ASN
32
1BFV
L
P01631
UNP
32
32
1
GLY
conflict
ARG
34
1BFV
L
P01631
UNP
34
34
1
ASN
conflict
ARG
35
1BFV
L
P01631
UNP
35
35
1
THR
conflict
ASN
36
1BFV
L
P01631
UNP
36
36
1
ASN
conflict
HIS
39
1BFV
L
P01631
UNP
39
39
1
ALA
conflict
PRO
45
1BFV
L
P01631
UNP
45
45
1
LEU
conflict
VAL
52
1BFV
L
P01631
UNP
52
52
1
GLU
conflict
ALA
84
1BFV
L
P01631
UNP
84
84
1
ILE
conflict
LEU
90
1BFV
L
P01631
UNP
90
90
1
THR
conflict
SER
96
1BFV
L
P01631
UNP
96
96
1
THR
conflict
SER
97
1BFV
L
P01631
UNP
97
97
1
PRO
conflict
LEU
101
1BFV
L
P01631
UNP
101
101
1
GLY
conflict
SER
105
1BFV
L
P01631
UNP
105
105
4
5
4
6
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
L
LEU
4
A
LEU
4
L
SER
7
A
SER
7
L
VAL
19
A
VAL
19
L
SER
25
A
SER
25
L
ASP
75
A
ASP
75
L
ILE
80
A
ILE
80
L
PHE
67
A
PHE
67
L
SER
72
A
SER
72
L
SER
10
A
SER
10
L
VAL
13
A
VAL
13
L
THR
107
A
THR
107
L
ILE
111
A
ILE
111
L
GLY
89
A
GLY
89
L
GLN
95
A
GLN
95
L
LEU
38
A
LEU
38
L
GLN
43
A
GLN
43
L
PRO
49
A
PRO
49
L
ILE
53
A
ILE
53
H
GLN
3
B
GLN
3
H
SER
7
B
SER
7
H
MET
18
B
MET
18
H
SER
25
B
SER
25
H
THR
78
B
THR
78
H
MET
83
B
MET
83
H
VAL
68
B
VAL
68
H
ASP
73
B
ASP
73
H
GLY
10
B
GLY
10
H
ASN
13
B
ASN
13
H
THR
113
B
THR
113
H
SER
118
B
SER
118
H
ALA
92
B
ALA
92
H
ARG
98
B
ARG
98
H
MET
34
B
MET
34
H
GLN
39
B
GLN
39
H
LEU
45
B
LEU
45
H
ILE
51
B
ILE
51
H
PRO
57
B
PRO
57
H
TYR
60
B
TYR
60
BINDING SITE FOR RESIDUE ZN L 200
L
ZN
200
Software
5
BINDING SITE FOR RESIDUE ZN L 201
L
ZN
201
Software
6
BINDING SITE FOR RESIDUE ZN H 201
H
ZN
201
Software
3
BINDING SITE FOR RESIDUE STG H 200
H
STG
200
Software
20
H
GLU
46
B
GLU
46
5
8_666
L
ASP
1
A
ASP
1
5
1_555
L
GLU
3
A
GLU
3
5
1_555
L
ZN
201
D
ZN
5
1_555
L
HOH
257
G
HOH
5
1_555
L
ASP
1
A
ASP
1
6
1_555
L
ASP
1
A
ASP
1
6
8_666
L
GLU
3
A
GLU
3
6
1_555
L
GLU
3
A
GLU
3
6
8_666
L
ZN
200
C
ZN
6
1_555
L
HOH
261
G
HOH
6
8_666
H
GLU
89
B
GLU
89
3
1_555
H
HOH
275
H
HOH
3
1_555
L
HIS
98
A
HIS
98
3
8_666
H
THR
28
B
THR
28
20
8_665
H
THR
31
B
THR
31
20
1_555
H
TYR
32
B
TYR
32
20
1_555
H
TYR
33
B
TYR
33
20
1_555
H
LEU
99
B
LEU
99
20
1_555
H
ASN
100
B
ASN
100
20
1_555
H
TYR
101
B
TYR
101
20
1_555
H
TYR
104
B
TYR
104
20
1_555
H
GLY
105
B
GLY
105
20
1_555
H
HOH
202
H
HOH
20
1_555
H
HOH
204
H
HOH
20
1_555
H
HOH
234
H
HOH
20
1_555
H
HOH
241
H
HOH
20
1_555
H
HOH
246
H
HOH
20
1_555
H
HOH
264
H
HOH
20
1_555
H
HOH
293
H
HOH
20
1_555
H
HOH
295
H
HOH
20
1_555
L
VAL
99
A
VAL
99
20
1_555
L
PRO
100
A
PRO
100
20
1_555
L
LEU
101
A
LEU
101
20
1_555
90
P 4 21 2