0.014085 0.000000 0.002661 0.000000 0.013850 0.000000 0.000000 0.000000 0.013922 0.00000 0.00000 0.00000 Kallen, J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 100.70 90.00 71.000 72.200 73.100 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C19 H28 N6 O4 S2 468.593 5-OXO-6-PHENYLMETHANESULFONYLAMINO-HEXAHYDRO-THIAZOLO[3,2-A]PYRIDINE-3-CARBOXYLIC ACID (3-GUANIDINO-PROPYL)-AMIDE non-polymer C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Med.Chem. JMCMAR 0151 0022-2623 41 3664 3674 10.1021/jm981013e 9733491 Rational design, synthesis, and X-ray structure of selective noncovalent thrombin inhibitors. 1998 10.2210/pdb1bhx/pdb pdb_00001bhx 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 293 1 DIFFRACTOMETER 1996-03 ENRAF-NONIUS FAST GRAPHITE(002) M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE ENRAF-NONIUS FR571 3461.871 ALPHA THROMBIN 3.4.21.5 1 nat polymer 17070.738 ALPHA THROMBIN 3.4.21.5 1 nat polymer 11969.626 ALPHA THROMBIN 3.4.21.5 1 nat polymer 651.662 ALPHA THROMBIN 3.4.21.5 1 nat polymer 468.593 5-OXO-6-PHENYLMETHANESULFONYLAMINO-HEXAHYDRO-THIAZOLO[3,2-A]PYRIDINE-3-CARBOXYLIC ACID (3-GUANIDINO-PROPYL)-AMIDE 1 syn non-polymer 18.015 water 201 nat water no no SGEADCGLRPLFEKKSLEDKTERELLESYI SGEADCGLRPLFEKKSLEDKTERELLESYI A polypeptide(L) no no IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKET IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKET B polypeptide(L) no no GQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRD GKYGFYTHVFRLKKWIQKVIDQFGE GQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRD GKYGFYTHVFRLKKWIQKVIDQFGE F polypeptide(L) no no DFEEI DFEEI E polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample 9606 Homo sapiens human Homo sample 9606 Homo sapiens human Homo sample 9606 Homo sapiens human Homo sample 9606 Homo sapiens 1 2.8 56 7.3 pH 7.3 diffrn_detector pdbx_database_status software database_2 pdbx_initial_refinement_model struct_site repository Initial release Version format compliance Version format compliance Atomic model Data collection Other Refinement description Database references Derived calculations Refinement description 1 0 1998-11-04 1 1 2008-03-24 1 2 2011-07-13 1 3 2011-11-16 1 4 2018-04-18 1 5 2023-08-02 _diffrn_detector.detector _pdbx_database_status.process_site _software.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1998-06-10 REL REL R56 5-OXO-6-PHENYLMETHANESULFONYLAMINO-HEXAHYDRO-THIAZOLO[3,2-A]PYRIDINE-3-CARBOXYLIC ACID (3-GUANIDINO-PROPYL)-AMIDE HOH water THROMBIN IS CLEAVED BETWEEN RESIDUES 15 AND 16. CHAIN-ID A IS USED FOR THROMBIN RESIDUES 1E - 14K CHAIN-ID B IS USED FOR THROMBIN RESIDUES 16 - 147 CHAIN-ID C IS USED FOR THROMBIN RESIDUES 150 - 247 CHAIN-ID E IS USED FOR HIRUDIN FRAGMENT RESIDUES 55 - 59 CHAIN-ID W IS USED FOR WATER MOLECULES CHAIN-ID L IS USED FOR INHIBITOR WATERS W1 AND W4 ARE IN SPECIAL POSITIONS. 1HAI PDB ENTRY 1HAI PDB experimental model R56 1 5 R56 R56 1 F HOH 27 6 HOH HOH 27 A HOH 44 6 HOH HOH 44 A HOH 62 6 HOH HOH 62 A HOH 80 6 HOH HOH 80 A HOH 82 6 HOH HOH 82 A HOH 85 6 HOH HOH 85 A HOH 97 6 HOH HOH 97 A HOH 106 6 HOH HOH 106 A HOH 116 6 HOH HOH 116 A HOH 137 6 HOH HOH 137 A HOH 140 6 HOH HOH 140 A HOH 142 6 HOH HOH 142 A HOH 143 6 HOH HOH 143 A HOH 152 6 HOH HOH 152 A HOH 154 6 HOH HOH 154 A HOH 160 6 HOH HOH 160 A HOH 179 6 HOH HOH 179 A HOH 192 6 HOH HOH 192 A HOH 199 6 HOH HOH 199 A HOH 2 6 HOH HOH 148 B HOH 4 6 HOH HOH 149 B HOH 5 6 HOH HOH 150 B HOH 7 6 HOH HOH 151 B HOH 9 6 HOH HOH 152 B HOH 12 6 HOH HOH 153 B HOH 13 6 HOH HOH 154 B HOH 15 6 HOH HOH 155 B HOH 16 6 HOH HOH 156 B HOH 20 6 HOH HOH 157 B HOH 21 6 HOH HOH 158 B HOH 22 6 HOH HOH 159 B HOH 23 6 HOH HOH 160 B HOH 26 6 HOH HOH 161 B HOH 28 6 HOH HOH 162 B HOH 31 6 HOH HOH 163 B HOH 33 6 HOH HOH 164 B HOH 35 6 HOH HOH 165 B HOH 36 6 HOH HOH 166 B HOH 39 6 HOH HOH 167 B HOH 40 6 HOH HOH 168 B HOH 45 6 HOH HOH 169 B HOH 46 6 HOH HOH 170 B HOH 47 6 HOH HOH 171 B HOH 50 6 HOH HOH 172 B HOH 51 6 HOH HOH 173 B HOH 53 6 HOH HOH 174 B HOH 55 6 HOH HOH 175 B HOH 58 6 HOH HOH 176 B HOH 59 6 HOH HOH 177 B HOH 60 6 HOH HOH 178 B HOH 67 6 HOH HOH 179 B HOH 71 6 HOH HOH 180 B HOH 74 6 HOH HOH 181 B HOH 75 6 HOH HOH 182 B HOH 87 6 HOH HOH 183 B HOH 88 6 HOH HOH 184 B HOH 90 6 HOH HOH 185 B HOH 98 6 HOH HOH 186 B HOH 100 6 HOH HOH 187 B HOH 101 6 HOH HOH 188 B HOH 102 6 HOH HOH 189 B HOH 103 6 HOH HOH 190 B HOH 105 6 HOH HOH 191 B HOH 109 6 HOH HOH 192 B HOH 110 6 HOH HOH 193 B HOH 111 6 HOH HOH 194 B HOH 112 6 HOH HOH 195 B HOH 113 6 HOH HOH 196 B HOH 114 6 HOH HOH 197 B HOH 117 6 HOH HOH 198 B HOH 119 6 HOH HOH 199 B HOH 120 6 HOH HOH 200 B HOH 122 6 HOH HOH 201 B HOH 124 6 HOH HOH 202 B HOH 125 6 HOH HOH 203 B HOH 126 6 HOH HOH 204 B HOH 127 6 HOH HOH 205 B HOH 128 6 HOH HOH 206 B HOH 129 6 HOH HOH 207 B HOH 130 6 HOH HOH 208 B HOH 131 6 HOH HOH 209 B HOH 134 6 HOH HOH 210 B HOH 136 6 HOH HOH 211 B HOH 144 6 HOH HOH 212 B HOH 146 6 HOH HOH 213 B HOH 147 6 HOH HOH 214 B HOH 149 6 HOH HOH 215 B HOH 151 6 HOH HOH 216 B HOH 155 6 HOH HOH 217 B HOH 157 6 HOH HOH 218 B HOH 161 6 HOH HOH 219 B HOH 162 6 HOH HOH 220 B HOH 163 6 HOH HOH 221 B HOH 164 6 HOH HOH 222 B HOH 167 6 HOH HOH 223 B HOH 170 6 HOH HOH 224 B HOH 175 6 HOH HOH 225 B HOH 176 6 HOH HOH 226 B HOH 177 6 HOH HOH 227 B HOH 181 6 HOH HOH 228 B HOH 185 6 HOH HOH 229 B HOH 188 6 HOH HOH 230 B HOH 189 6 HOH HOH 231 B HOH 190 6 HOH HOH 232 B HOH 191 6 HOH HOH 233 B HOH 194 6 HOH HOH 234 B HOH 3 6 HOH HOH 248 F HOH 6 6 HOH HOH 249 F HOH 8 6 HOH HOH 250 F HOH 10 6 HOH HOH 251 F HOH 11 6 HOH HOH 252 F HOH 14 6 HOH HOH 253 F HOH 17 6 HOH HOH 254 F HOH 18 6 HOH HOH 255 F HOH 19 6 HOH HOH 256 F HOH 25 6 HOH HOH 257 F HOH 29 6 HOH HOH 258 F HOH 30 6 HOH HOH 259 F HOH 32 6 HOH HOH 260 F HOH 34 6 HOH HOH 261 F HOH 37 6 HOH HOH 262 F HOH 38 6 HOH HOH 263 F HOH 41 6 HOH HOH 264 F HOH 42 6 HOH HOH 265 F HOH 43 6 HOH HOH 266 F HOH 48 6 HOH HOH 267 F HOH 49 6 HOH HOH 268 F HOH 52 6 HOH HOH 269 F HOH 56 6 HOH HOH 270 F HOH 57 6 HOH HOH 271 F HOH 61 6 HOH HOH 272 F HOH 63 6 HOH HOH 273 F HOH 64 6 HOH HOH 274 F HOH 65 6 HOH HOH 275 F HOH 66 6 HOH HOH 276 F HOH 68 6 HOH HOH 277 F HOH 69 6 HOH HOH 278 F HOH 70 6 HOH HOH 279 F HOH 72 6 HOH HOH 280 F HOH 73 6 HOH HOH 281 F HOH 76 6 HOH HOH 282 F HOH 77 6 HOH HOH 283 F HOH 78 6 HOH HOH 284 F HOH 79 6 HOH HOH 285 F HOH 81 6 HOH HOH 286 F HOH 83 6 HOH HOH 287 F HOH 84 6 HOH HOH 288 F HOH 86 6 HOH HOH 289 F HOH 89 6 HOH HOH 290 F HOH 91 6 HOH HOH 291 F HOH 92 6 HOH HOH 292 F HOH 93 6 HOH HOH 293 F HOH 94 6 HOH HOH 294 F HOH 95 6 HOH HOH 295 F HOH 96 6 HOH HOH 296 F HOH 99 6 HOH HOH 297 F HOH 104 6 HOH HOH 298 F HOH 107 6 HOH HOH 299 F HOH 108 6 HOH HOH 300 F HOH 115 6 HOH HOH 301 F HOH 118 6 HOH HOH 302 F HOH 121 6 HOH HOH 303 F HOH 123 6 HOH HOH 304 F HOH 132 6 HOH HOH 305 F HOH 133 6 HOH HOH 306 F HOH 138 6 HOH HOH 307 F HOH 141 6 HOH HOH 308 F HOH 145 6 HOH HOH 309 F HOH 148 6 HOH HOH 310 F HOH 150 6 HOH HOH 311 F HOH 153 6 HOH HOH 312 F HOH 156 6 HOH HOH 313 F HOH 158 6 HOH HOH 314 F HOH 159 6 HOH HOH 315 F HOH 165 6 HOH HOH 316 F HOH 166 6 HOH HOH 317 F HOH 168 6 HOH HOH 318 F HOH 169 6 HOH HOH 319 F HOH 171 6 HOH HOH 320 F HOH 172 6 HOH HOH 321 F HOH 173 6 HOH HOH 322 F HOH 174 6 HOH HOH 323 F HOH 178 6 HOH HOH 324 F HOH 180 6 HOH HOH 325 F HOH 182 6 HOH HOH 326 F HOH 183 6 HOH HOH 327 F HOH 184 6 HOH HOH 328 F HOH 186 6 HOH HOH 329 F HOH 187 6 HOH HOH 330 F HOH 193 6 HOH HOH 331 F HOH 195 6 HOH HOH 332 F HOH 196 6 HOH HOH 333 F HOH 197 6 HOH HOH 334 F HOH 198 6 HOH HOH 335 F HOH 200 6 HOH HOH 336 F HOH 201 6 HOH HOH 337 F HOH 1 6 HOH HOH 1 E HOH 24 6 HOH HOH 24 E HOH 54 6 HOH HOH 54 E HOH 135 6 HOH HOH 135 E HOH 139 6 HOH HOH 139 E SER 1 n 1 E SER 1 A GLY 1 n 2 D GLY 1 A GLU 1 n 3 C GLU 1 A ALA 1 n 4 B ALA 1 A ASP 1 n 5 A ASP 1 A CYS 1 n 6 CYS 1 A GLY 2 n 7 GLY 2 A LEU 3 n 8 LEU 3 A ARG 4 n 9 ARG 4 A PRO 5 n 10 PRO 5 A LEU 6 n 11 LEU 6 A PHE 7 n 12 PHE 7 A GLU 8 n 13 GLU 8 A LYS 9 n 14 LYS 9 A LYS 10 n 15 LYS 10 A SER 11 n 16 SER 11 A LEU 12 n 17 LEU 12 A GLU 13 n 18 GLU 13 A ASP 14 n 19 ASP 14 A LYS 14 n 20 A LYS 14 A THR 14 n 21 B THR 14 A GLU 14 n 22 C GLU 14 A ARG 14 n 23 D ARG 14 A GLU 14 n 24 E GLU 14 A LEU 14 n 25 F LEU 14 A LEU 14 n 26 G LEU 14 A GLU 14 n 27 H GLU 14 A SER 14 n 28 I SER 14 A TYR 14 n 29 J TYR 14 A ILE 14 n 30 K ILE 14 A ILE 16 n 1 ILE 16 B VAL 17 n 2 VAL 17 B GLU 18 n 3 GLU 18 B GLY 19 n 4 GLY 19 B SER 20 n 5 SER 20 B ASP 21 n 6 ASP 21 B ALA 22 n 7 ALA 22 B GLU 23 n 8 GLU 23 B ILE 24 n 9 ILE 24 B GLY 25 n 10 GLY 25 B MET 26 n 11 MET 26 B SER 27 n 12 SER 27 B PRO 28 n 13 PRO 28 B TRP 29 n 14 TRP 29 B GLN 30 n 15 GLN 30 B VAL 31 n 16 VAL 31 B MET 32 n 17 MET 32 B LEU 33 n 18 LEU 33 B PHE 34 n 19 PHE 34 B ARG 35 n 20 ARG 35 B LYS 36 n 21 LYS 36 B SER 36 n 22 A SER 36 B PRO 37 n 23 PRO 37 B GLN 38 n 24 GLN 38 B GLU 39 n 25 GLU 39 B LEU 40 n 26 LEU 40 B LEU 41 n 27 LEU 41 B CYS 42 n 28 CYS 42 B GLY 43 n 29 GLY 43 B ALA 44 n 30 ALA 44 B SER 45 n 31 SER 45 B LEU 46 n 32 LEU 46 B ILE 47 n 33 ILE 47 B SER 48 n 34 SER 48 B ASP 49 n 35 ASP 49 B ARG 50 n 36 ARG 50 B TRP 51 n 37 TRP 51 B VAL 52 n 38 VAL 52 B LEU 53 n 39 LEU 53 B THR 54 n 40 THR 54 B ALA 55 n 41 ALA 55 B ALA 56 n 42 ALA 56 B HIS 57 n 43 HIS 57 B CYS 58 n 44 CYS 58 B LEU 59 n 45 LEU 59 B LEU 60 n 46 LEU 60 B TYR 60 n 47 A TYR 60 B PRO 60 n 48 B PRO 60 B PRO 60 n 49 C PRO 60 B TRP 60 n 50 D TRP 60 B ASP 60 n 51 E ASP 60 B LYS 60 n 52 F LYS 60 B ASN 60 n 53 G ASN 60 B PHE 60 n 54 H PHE 60 B THR 60 n 55 I THR 60 B GLU 61 n 56 GLU 61 B ASN 62 n 57 ASN 62 B ASP 63 n 58 ASP 63 B LEU 64 n 59 LEU 64 B LEU 65 n 60 LEU 65 B VAL 66 n 61 VAL 66 B ARG 67 n 62 ARG 67 B ILE 68 n 63 ILE 68 B GLY 69 n 64 GLY 69 B LYS 70 n 65 LYS 70 B HIS 71 n 66 HIS 71 B SER 72 n 67 SER 72 B ARG 73 n 68 ARG 73 B THR 74 n 69 THR 74 B ARG 75 n 70 ARG 75 B TYR 76 n 71 TYR 76 B GLU 77 n 72 GLU 77 B ARG 77 n 73 A ARG 77 B ASN 78 n 74 ASN 78 B ILE 79 n 75 ILE 79 B GLU 80 n 76 GLU 80 B LYS 81 n 77 LYS 81 B ILE 82 n 78 ILE 82 B SER 83 n 79 SER 83 B MET 84 n 80 MET 84 B LEU 85 n 81 LEU 85 B GLU 86 n 82 GLU 86 B LYS 87 n 83 LYS 87 B ILE 88 n 84 ILE 88 B TYR 89 n 85 TYR 89 B ILE 90 n 86 ILE 90 B HIS 91 n 87 HIS 91 B PRO 92 n 88 PRO 92 B ARG 93 n 89 ARG 93 B TYR 94 n 90 TYR 94 B ASN 95 n 91 ASN 95 B TRP 96 n 92 TRP 96 B ARG 97 n 93 ARG 97 B GLU 97 n 94 A GLU 97 B ASN 98 n 95 ASN 98 B LEU 99 n 96 LEU 99 B ASP 100 n 97 ASP 100 B ARG 101 n 98 ARG 101 B ASP 102 n 99 ASP 102 B ILE 103 n 100 ILE 103 B ALA 104 n 101 ALA 104 B LEU 105 n 102 LEU 105 B MET 106 n 103 MET 106 B LYS 107 n 104 LYS 107 B LEU 108 n 105 LEU 108 B LYS 109 n 106 LYS 109 B LYS 110 n 107 LYS 110 B PRO 111 n 108 PRO 111 B VAL 112 n 109 VAL 112 B ALA 113 n 110 ALA 113 B PHE 114 n 111 PHE 114 B SER 115 n 112 SER 115 B ASP 116 n 113 ASP 116 B TYR 117 n 114 TYR 117 B ILE 118 n 115 ILE 118 B HIS 119 n 116 HIS 119 B PRO 120 n 117 PRO 120 B VAL 121 n 118 VAL 121 B CYS 122 n 119 CYS 122 B LEU 123 n 120 LEU 123 B PRO 124 n 121 PRO 124 B ASP 125 n 122 ASP 125 B ARG 126 n 123 ARG 126 B GLU 127 n 124 GLU 127 B THR 128 n 125 THR 128 B ALA 129 n 126 ALA 129 B ALA 129 n 127 A ALA 129 B SER 129 n 128 B SER 129 B LEU 129 n 129 C LEU 129 B LEU 130 n 130 LEU 130 B GLN 131 n 131 GLN 131 B ALA 132 n 132 ALA 132 B GLY 133 n 133 GLY 133 B TYR 134 n 134 TYR 134 B LYS 135 n 135 LYS 135 B GLY 136 n 136 GLY 136 B ARG 137 n 137 ARG 137 B VAL 138 n 138 VAL 138 B THR 139 n 139 THR 139 B GLY 140 n 140 GLY 140 B TRP 141 n 141 TRP 141 B GLY 142 n 142 GLY 142 B ASN 143 n 143 ASN 143 B LEU 144 n 144 LEU 144 B LYS 145 n 145 LYS 145 B GLU 146 n 146 GLU 146 B THR 147 n 147 THR 147 B GLY 150 n 1 GLY 150 F GLN 151 n 2 GLN 151 F PRO 152 n 3 PRO 152 F SER 153 n 4 SER 153 F VAL 154 n 5 VAL 154 F LEU 155 n 6 LEU 155 F GLN 156 n 7 GLN 156 F VAL 157 n 8 VAL 157 F VAL 158 n 9 VAL 158 F ASN 159 n 10 ASN 159 F LEU 160 n 11 LEU 160 F PRO 161 n 12 PRO 161 F ILE 162 n 13 ILE 162 F VAL 163 n 14 VAL 163 F GLU 164 n 15 GLU 164 F ARG 165 n 16 ARG 165 F PRO 166 n 17 PRO 166 F VAL 167 n 18 VAL 167 F CYS 168 n 19 CYS 168 F LYS 169 n 20 LYS 169 F ASP 170 n 21 ASP 170 F SER 171 n 22 SER 171 F THR 172 n 23 THR 172 F ARG 173 n 24 ARG 173 F ILE 174 n 25 ILE 174 F ARG 175 n 26 ARG 175 F ILE 176 n 27 ILE 176 F THR 177 n 28 THR 177 F ASP 178 n 29 ASP 178 F ASN 179 n 30 ASN 179 F MET 180 n 31 MET 180 F PHE 181 n 32 PHE 181 F CYS 182 n 33 CYS 182 F ALA 183 n 34 ALA 183 F GLY 184 n 35 GLY 184 F TYR 184 n 36 A TYR 184 F LYS 185 n 37 LYS 185 F PRO 186 n 38 PRO 186 F ASP 186 n 39 A ASP 186 F GLU 186 n 40 B GLU 186 F GLY 186 n 41 C GLY 186 F LYS 186 n 42 D LYS 186 F ARG 187 n 43 ARG 187 F GLY 188 n 44 GLY 188 F ASP 189 n 45 ASP 189 F ALA 190 n 46 ALA 190 F CYS 191 n 47 CYS 191 F GLU 192 n 48 GLU 192 F GLY 193 n 49 GLY 193 F ASP 194 n 50 ASP 194 F SER 195 n 51 SER 195 F GLY 196 n 52 GLY 196 F GLY 197 n 53 GLY 197 F PRO 198 n 54 PRO 198 F PHE 199 n 55 PHE 199 F VAL 200 n 56 VAL 200 F MET 201 n 57 MET 201 F LYS 202 n 58 LYS 202 F SER 203 n 59 SER 203 F PRO 204 n 60 PRO 204 F PHE 204 n 61 A PHE 204 F ASN 204 n 62 B ASN 204 F ASN 205 n 63 ASN 205 F ARG 206 n 64 ARG 206 F TRP 207 n 65 TRP 207 F TYR 208 n 66 TYR 208 F GLN 209 n 67 GLN 209 F MET 210 n 68 MET 210 F GLY 211 n 69 GLY 211 F ILE 212 n 70 ILE 212 F VAL 213 n 71 VAL 213 F SER 214 n 72 SER 214 F TRP 215 n 73 TRP 215 F GLY 216 n 74 GLY 216 F GLU 217 n 75 GLU 217 F GLY 219 n 76 GLY 219 F CYS 220 n 77 CYS 220 F ASP 221 n 78 ASP 221 F ARG 221 n 79 A ARG 221 F ASP 222 n 80 ASP 222 F GLY 223 n 81 GLY 223 F LYS 224 n 82 LYS 224 F TYR 225 n 83 TYR 225 F GLY 226 n 84 GLY 226 F PHE 227 n 85 PHE 227 F TYR 228 n 86 TYR 228 F THR 229 n 87 THR 229 F HIS 230 n 88 HIS 230 F VAL 231 n 89 VAL 231 F PHE 232 n 90 PHE 232 F ARG 233 n 91 ARG 233 F LEU 234 n 92 LEU 234 F LYS 235 n 93 LYS 235 F LYS 236 n 94 LYS 236 F TRP 237 n 95 TRP 237 F ILE 238 n 96 ILE 238 F GLN 239 n 97 GLN 239 F LYS 240 n 98 LYS 240 F VAL 241 n 99 VAL 241 F ILE 242 n 100 ILE 242 F ASP 243 n 101 ASP 243 F GLN 244 n 102 GLN 244 F PHE 245 n 103 PHE 245 F GLY 246 n 104 GLY 246 F GLU 247 n 105 GLU 247 F ASP 55 n 1 ASP 55 E PHE 56 n 2 PHE 56 E GLU 57 n 3 GLU 57 E GLU 58 n 4 GLU 58 E ILE 59 n 5 ILE 59 E author_defined_assembly 4 tetrameric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 B O LYS 81 B O LYS 77 B N ILE 68 B N ILE 63 B O LEU 65 B O LEU 60 B N PHE 34 B N PHE 19 B O VAL 31 B O VAL 16 B N ALA 44 B N ALA 30 B O VAL 52 B O VAL 38 B N MET 106 B N MET 103 B O LEU 105 B O LEU 102 B N TYR 89 B N TYR 85 F O PHE 181 C O PHE 32 F N TYR 228 C N TYR 86 F O PHE 227 C O PHE 85 F N TRP 215 C N TRP 73 F O TYR 208 C O TYR 66 F N MET 201 C N MET 57 1 B HOH 149 G HOH 1 E HOH 1 I HOH 1 -9.17 1.50 110.50 101.33 B B B N CA CB SER SER SER 27 27 27 N 1 3.14 0.50 120.30 123.44 B B B NE CZ NH1 ARG ARG ARG 101 101 101 N 1 5.46 0.90 118.30 123.76 F F F CB CG OD1 ASP ASP ASP 189 189 189 N 1 A PHE 7 -134.56 -78.22 A 1 B SER 36 -167.21 119.69 1 B ALA 44 -171.53 -179.18 A 1 B TYR 60 -155.40 79.38 G 1 B ASN 60 -168.46 84.13 1 B HIS 71 -130.72 -56.23 1 B ASN 78 63.76 -0.68 1 F SER 214 -107.79 -84.48 PARHCSDX.PRO TOPHCSDX.PRO 229357.PRM TOPH19.PEP TOPH19.SOL 25.6 0.00 0.00 0.00 0.00 0.00 0.00 0.232 0.006 0.187 0.187 2.30 8.00 1517 15004 10.1 94.9 RANDOM 100000000.00 0.00010 1 RESTRAINED A POSTERIORI 0.0 DIFFERENCE FOURIER PDB ENTRY 1HAI 0.31 0.25 5.00 0.39 0.34 2.30 8.00 201 2893 77 0 2615 0.015 2.5 24.3 1.37 2.81 1.50 4.24 2.00 4.50 2.00 6.28 2.50 0.345 0.022 0.283 2.44 242 2235 6 9.8 94.9 29.3 2.3 15.0 1BHX 15423 2 0.104 1 7.8 2.7 95 2.3 2.38 3.6 0.432 2.6 94.6 data collection MADNES data reduction PROCOR data reduction Agrovata model building X-PLOR refinement X-PLOR data reduction MADNES data scaling PROCOR data scaling Agrovata phasing X-PLOR X-RAY STRUCTURE OF THE COMPLEX OF HUMAN ALPHA THROMBIN WITH THE INHIBITOR SDZ 229-357 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 6 N N 6 N N 6 N N A GLU 8 A GLU 13 HELX_P A LYS 10 A LYS 15 5 1 3 A GLU 14 A GLU 22 HELX_P A SER 14 A SER 28 1 2 7 C I B ALA 56 B ALA 42 HELX_P B CYS 58 B CYS 44 5 3 3 B PRO 60 B PRO 48 HELX_P B TRP 60 B TRP 50 5 4 3 B D B GLU 61 B GLU 56 HELX_P B ASP 63 B ASP 58 5 5 3 B ARG 126 B ARG 123 HELX_P B LEU 129 B LEU 129 1 6 7 C F ARG 165 C ARG 16 HELX_P F SER 171 C SER 22 1 7 7 F PRO 186 C PRO 38 HELX_P F GLU 186 C GLU 40 5 8 3 B F PHE 232 C PHE 90 HELX_P F PHE 245 C PHE 103 5 9 14 disulf 2.020 A CYS 1 A SG CYS 6 1_555 B CYS 122 B SG CYS 119 1_555 disulf 2.029 B CYS 42 B SG CYS 28 1_555 B CYS 58 B SG CYS 44 1_555 disulf 2.019 F CYS 168 C SG CYS 19 1_555 F CYS 182 C SG CYS 33 1_555 disulf 2.034 F CYS 191 C SG CYS 47 1_555 F CYS 220 C SG CYS 77 1_555 SERINE PROTEASE SERINE PROTEASE B SER 36 B SER 22 A 1 B PRO 37 B PRO 23 0.12 THRB_HUMAN UNP 1 331 P00734 THRB_HUMAN UNP 2 364 P00734 THRB_HUMAN UNP 3 518 P00734 1BHX PDB 4 1BHX 331 360 1BHX 1 14 P00734 A 1 6 19 364 510 1BHX 16 147 P00734 B 2 1 147 518 622 1BHX 150 247 P00734 F 3 1 105 55 59 1BHX 55 59 1BHX E 4 1 5 4 3 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel B LYS 81 B LYS 77 B MET 84 B MET 80 B LEU 64 B LEU 59 B ILE 68 B ILE 63 B GLN 30 B GLN 15 B ARG 35 B ARG 20 B GLU 39 B GLU 25 B SER 45 B SER 31 B TRP 51 B TRP 37 B THR 54 B THR 40 B ALA 104 B ALA 101 B LEU 108 B LEU 105 B LEU 85 B LEU 81 B ILE 90 B ILE 86 F MET 180 C MET 31 F ALA 183 C ALA 34 F GLY 226 C GLY 84 F HIS 230 C HIS 88 F TRP 207 C TRP 65 F TRP 215 C TRP 73 F PRO 198 C PRO 54 F LYS 202 C LYS 58 BINDING SITE FOR RESIDUE R56 F 1 F R56 1 Software 14 B HIS 57 B HIS 43 14 1_555 B TYR 60 B TYR 47 A 14 1_555 B GLU 97 B GLU 94 A 14 1_555 F ASP 189 C ASP 45 14 1_555 F ALA 190 C ALA 46 14 1_555 F CYS 191 C CYS 47 14 1_555 F SER 195 C SER 51 14 1_555 F SER 214 C SER 72 14 1_555 F TRP 215 C TRP 73 14 1_555 F GLY 216 C GLY 74 14 1_555 F GLU 217 C GLU 75 14 1_555 F GLY 219 C GLY 76 14 1_555 F GLY 226 C GLY 84 14 1_555 F HOH 248 H HOH 14 1_555 5 C 1 2 1