0.012710
0.000000
0.000000
0.000000
0.012710
0.000000
0.000000
0.000000
0.026991
0.00000
0.00000
0.00000
Ramin, M.
Shepard, W.
Fourme, R.
Kahn, R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
78.680
78.680
37.050
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
55
157
167
10.1107/S090744499800626X
10089406
Multiwavelength anomalous solvent contrast (MASC): derivation of envelope structure-factor amplitudes and comparison with model values.
1999
UK
Nature
NATUAS
0006
0028-0836
206
757
Structure of Hen Egg-White Lysozyme. A Three-Dimensional Fourier Synthesis at 2 Angstrom Resolution
1965
10.2210/pdb1bhz/pdb
pdb_00001bhz
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
124
1
MIRRORS
IMAGE PLATE
1996-11
MARRESEARCH
SI(111)
M
x-ray
1
1.39
1.0
DW21B
LURE
1.39
SYNCHROTRON
LURE BEAMLINE DW21B
14331.160
LYSOZYME
3.2.1.17
1
nat
polymer
no
no
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
chicken
Gallus
sample
EGG
CYTOPLASM (WHITE)
9031
Gallus gallus
1
1.9
30.3
PROTEIN WAS CRYSTALLIZED FROM SODIUM CHLORIDE SOLUTIONS
database_2
pdbx_initial_refinement_model
software
repository
Initial release
Version format compliance
Version format compliance
Database references
Refinement description
1
0
1998-11-04
1
1
2008-03-24
1
2
2011-07-13
1
3
2023-08-02
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_software.name
Y
BNL
1998-06-10
REL
1LSE
PDB
experimental model
LYS
1
n
1
LYS
1
A
VAL
2
n
2
VAL
2
A
PHE
3
n
3
PHE
3
A
GLY
4
n
4
GLY
4
A
ARG
5
n
5
ARG
5
A
CYS
6
n
6
CYS
6
A
GLU
7
n
7
GLU
7
A
LEU
8
n
8
LEU
8
A
ALA
9
n
9
ALA
9
A
ALA
10
n
10
ALA
10
A
ALA
11
n
11
ALA
11
A
MET
12
n
12
MET
12
A
LYS
13
n
13
LYS
13
A
ARG
14
n
14
ARG
14
A
HIS
15
n
15
HIS
15
A
GLY
16
n
16
GLY
16
A
LEU
17
n
17
LEU
17
A
ASP
18
n
18
ASP
18
A
ASN
19
n
19
ASN
19
A
TYR
20
n
20
TYR
20
A
ARG
21
n
21
ARG
21
A
GLY
22
n
22
GLY
22
A
TYR
23
n
23
TYR
23
A
SER
24
n
24
SER
24
A
LEU
25
n
25
LEU
25
A
GLY
26
n
26
GLY
26
A
ASN
27
n
27
ASN
27
A
TRP
28
n
28
TRP
28
A
VAL
29
n
29
VAL
29
A
CYS
30
n
30
CYS
30
A
ALA
31
n
31
ALA
31
A
ALA
32
n
32
ALA
32
A
LYS
33
n
33
LYS
33
A
PHE
34
n
34
PHE
34
A
GLU
35
n
35
GLU
35
A
SER
36
n
36
SER
36
A
ASN
37
n
37
ASN
37
A
PHE
38
n
38
PHE
38
A
ASN
39
n
39
ASN
39
A
THR
40
n
40
THR
40
A
GLN
41
n
41
GLN
41
A
ALA
42
n
42
ALA
42
A
THR
43
n
43
THR
43
A
ASN
44
n
44
ASN
44
A
ARG
45
n
45
ARG
45
A
ASN
46
n
46
ASN
46
A
THR
47
n
47
THR
47
A
ASP
48
n
48
ASP
48
A
GLY
49
n
49
GLY
49
A
SER
50
n
50
SER
50
A
THR
51
n
51
THR
51
A
ASP
52
n
52
ASP
52
A
TYR
53
n
53
TYR
53
A
GLY
54
n
54
GLY
54
A
ILE
55
n
55
ILE
55
A
LEU
56
n
56
LEU
56
A
GLN
57
n
57
GLN
57
A
ILE
58
n
58
ILE
58
A
ASN
59
n
59
ASN
59
A
SER
60
n
60
SER
60
A
ARG
61
n
61
ARG
61
A
TRP
62
n
62
TRP
62
A
TRP
63
n
63
TRP
63
A
CYS
64
n
64
CYS
64
A
ASN
65
n
65
ASN
65
A
ASP
66
n
66
ASP
66
A
GLY
67
n
67
GLY
67
A
ARG
68
n
68
ARG
68
A
THR
69
n
69
THR
69
A
PRO
70
n
70
PRO
70
A
GLY
71
n
71
GLY
71
A
SER
72
n
72
SER
72
A
ARG
73
n
73
ARG
73
A
ASN
74
n
74
ASN
74
A
LEU
75
n
75
LEU
75
A
CYS
76
n
76
CYS
76
A
ASN
77
n
77
ASN
77
A
ILE
78
n
78
ILE
78
A
PRO
79
n
79
PRO
79
A
CYS
80
n
80
CYS
80
A
SER
81
n
81
SER
81
A
ALA
82
n
82
ALA
82
A
LEU
83
n
83
LEU
83
A
LEU
84
n
84
LEU
84
A
SER
85
n
85
SER
85
A
SER
86
n
86
SER
86
A
ASP
87
n
87
ASP
87
A
ILE
88
n
88
ILE
88
A
THR
89
n
89
THR
89
A
ALA
90
n
90
ALA
90
A
SER
91
n
91
SER
91
A
VAL
92
n
92
VAL
92
A
ASN
93
n
93
ASN
93
A
CYS
94
n
94
CYS
94
A
ALA
95
n
95
ALA
95
A
LYS
96
n
96
LYS
96
A
LYS
97
n
97
LYS
97
A
ILE
98
n
98
ILE
98
A
VAL
99
n
99
VAL
99
A
SER
100
n
100
SER
100
A
ASP
101
n
101
ASP
101
A
GLY
102
n
102
GLY
102
A
ASN
103
n
103
ASN
103
A
GLY
104
n
104
GLY
104
A
MET
105
n
105
MET
105
A
ASN
106
n
106
ASN
106
A
ALA
107
n
107
ALA
107
A
TRP
108
n
108
TRP
108
A
VAL
109
n
109
VAL
109
A
ALA
110
n
110
ALA
110
A
TRP
111
n
111
TRP
111
A
ARG
112
n
112
ARG
112
A
ASN
113
n
113
ASN
113
A
ARG
114
n
114
ARG
114
A
CYS
115
n
115
CYS
115
A
LYS
116
n
116
LYS
116
A
GLY
117
n
117
GLY
117
A
THR
118
n
118
THR
118
A
ASP
119
n
119
ASP
119
A
VAL
120
n
120
VAL
120
A
GLN
121
n
121
GLN
121
A
ALA
122
n
122
ALA
122
A
TRP
123
n
123
TRP
123
A
ILE
124
n
124
ILE
124
A
ARG
125
n
125
ARG
125
A
GLY
126
n
126
GLY
126
A
CYS
127
n
127
CYS
127
A
ARG
128
n
128
ARG
128
A
LEU
129
n
129
LEU
129
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ASN
44
A
O
ASN
44
A
N
ASP
52
A
N
ASP
52
1
A
A
O
NZ
HIS
LYS
15
96
2.15
1
A
ARG
45
14.02
1
A
SER
60
-14.44
1
A
CYS
115
13.07
1
A
A
C
N
PHE
GLY
3
4
0.92
1
A
A
C
N
GLY
SER
49
50
0.74
1
A
A
C
N
TYR
GLY
53
54
1.11
1
A
A
C
N
LEU
GLN
56
57
1.72
1
A
A
C
N
LEU
SER
84
85
1.17
1
A
A
C
N
ILE
THR
88
89
1.15
1
A
A
C
N
ALA
TRP
107
108
1.04
1
A
A
C
N
CYS
LYS
115
116
1.11
1
4.61
0.50
120.30
124.91
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
5
5
5
N
1
-7.48
0.50
120.30
112.82
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
5
5
5
N
1
-4.91
0.50
120.30
115.39
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
14
14
14
N
1
-21.42
2.20
117.20
95.78
A
A
A
CA
C
N
GLY
GLY
LEU
16
16
17
Y
1
19.70
1.60
122.70
142.40
A
A
A
O
C
N
GLY
GLY
LEU
16
16
17
Y
1
-27.85
2.50
121.70
93.85
A
A
A
C
N
CA
GLY
LEU
LEU
16
17
17
Y
1
16.63
2.60
111.60
128.23
A
A
A
CB
CG
CD
ARG
ARG
ARG
21
21
21
N
1
5.28
0.50
120.30
125.58
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
21
21
21
N
1
-14.00
2.20
117.20
103.20
A
A
A
CA
C
N
TYR
TYR
SER
23
23
24
Y
1
5.99
0.80
106.30
112.29
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
28
28
28
N
1
-5.78
0.80
107.30
101.52
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
28
28
28
N
1
-3.06
0.50
120.30
117.24
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
45
45
45
N
1
-13.95
1.60
122.70
108.75
A
A
A
O
C
N
ARG
ARG
ASN
45
45
46
Y
1
22.39
2.00
116.20
138.59
A
A
A
CA
C
N
TYR
TYR
GLY
53
53
54
Y
1
-22.67
1.70
123.20
100.53
A
A
A
O
C
N
TYR
TYR
GLY
53
53
54
Y
1
19.22
2.10
122.30
141.52
A
A
A
C
N
CA
TYR
GLY
GLY
53
54
54
Y
1
20.27
2.20
117.20
137.47
A
A
A
CA
C
N
SER
SER
ARG
60
60
61
Y
1
-19.59
1.60
122.70
103.11
A
A
A
O
C
N
SER
SER
ARG
60
60
61
Y
1
16.56
2.50
121.70
138.26
A
A
A
C
N
CA
SER
ARG
ARG
60
61
61
Y
1
3.47
0.50
120.30
123.77
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
61
61
61
N
1
6.83
0.80
106.30
113.13
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
62
62
62
N
1
-5.94
0.80
107.30
101.36
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
62
62
62
N
1
6.30
0.80
106.30
112.60
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
63
63
63
N
1
-5.87
0.80
107.30
101.43
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
63
63
63
N
1
-14.35
1.90
111.40
97.05
A
A
A
CB
CA
C
VAL
VAL
VAL
99
99
99
N
1
6.01
0.80
106.30
112.31
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
108
108
108
N
1
-5.68
0.80
107.30
101.62
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
108
108
108
N
1
5.41
0.80
106.30
111.71
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
111
111
111
N
1
-5.14
0.80
107.30
102.16
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
111
111
111
N
1
-3.69
0.50
120.30
116.61
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
112
112
112
N
1
-16.02
2.20
117.20
101.18
A
A
A
CA
C
N
ASP
ASP
VAL
119
119
120
Y
1
10.51
1.60
122.70
133.21
A
A
A
O
C
N
ASP
ASP
VAL
119
119
120
Y
1
5.67
0.80
106.30
111.97
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
123
123
123
N
1
-5.90
0.80
107.30
101.40
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
123
123
123
N
1
3.24
0.50
120.30
123.54
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
125
125
125
N
1
-4.08
0.50
120.30
116.22
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
128
128
128
N
1
A
A
C
N
PHE
GLY
3
4
-0.417
0.023
1.336
0.919
Y
1
A
A
C
N
GLY
LEU
16
17
0.249
0.023
1.336
1.585
Y
1
A
A
C
N
ASN
THR
39
40
0.192
0.023
1.336
1.528
Y
1
A
A
C
N
GLY
SER
49
50
-0.600
0.023
1.336
0.736
Y
1
A
A
C
N
TYR
GLY
53
54
-0.225
0.023
1.336
1.111
Y
1
A
A
C
N
LEU
SER
84
85
-0.166
0.023
1.336
1.170
Y
1
A
A
C
N
ASP
ILE
87
88
0.200
0.023
1.336
1.536
Y
1
A
A
C
N
ILE
THR
88
89
-0.183
0.023
1.336
1.153
Y
1
A
A
C
N
ALA
TRP
107
108
-0.294
0.023
1.336
1.042
Y
1
A
A
C
N
CYS
LYS
115
116
-0.227
0.023
1.336
1.109
Y
1
A
A
C
N
ASP
VAL
119
120
0.178
0.023
1.336
1.514
Y
1
A
A
OXT
OXT
LEU
LEU
129
129
2.13
1_555
8_555
1
A
SER
24
-38.32
159.01
1
A
ASN
74
39.25
50.03
1
A
SER
85
-48.69
154.93
1
A
LYS
116
-26.84
125.71
0.308
0.315
0.315
3.9
8.0
10.0
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT, RIGID BODY REFINEMENT
1LSE
3.9
8.0
0
1156
0
0
1156
3.91
33.5
1BHZ
1092
3.0
0.028
0.028
1
18.3
9.4
84.7
0.028
3.91
4.0
46.7
0.028
2.0
78.0
data reduction
MOSFLM
data scaling
SCALA
data reduction
Agrovata
(CCP4)
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
data scaling
CCP4
(AGROVATA
phasing
X-PLOR
3.1
LOW TEMPERATURE MIDDLE RESOLUTION STRUCTURE OF HEN EGG WHITE LYSOZYME FROM MASC DATA
1
N
N
A
ARG
5
A
ARG
5
HELX_P
A
ARG
14
A
ARG
14
1
1
10
A
TYR
20
A
TYR
20
HELX_P
A
GLY
22
A
GLY
22
5
2
3
A
ASN
27
A
ASN
27
HELX_P
A
SER
36
A
SER
36
1
3
10
A
CYS
80
A
CYS
80
HELX_P
A
LEU
84
A
LEU
84
5
4
5
A
THR
89
A
THR
89
HELX_P
A
VAL
99
A
VAL
99
1
5
11
A
GLY
104
A
GLY
104
HELX_P
A
ALA
107
A
ALA
107
5
6
4
A
VAL
109
A
VAL
109
HELX_P
A
ARG
114
A
ARG
114
1
7
6
A
VAL
120
A
VAL
120
HELX_P
A
ILE
124
A
ILE
124
5
8
5
disulf
1.656
A
CYS
6
A
SG
CYS
6
1_555
A
CYS
127
A
SG
CYS
127
1_555
disulf
2.033
A
CYS
30
A
SG
CYS
30
1_555
A
CYS
115
A
SG
CYS
115
1_555
disulf
1.925
A
CYS
64
A
SG
CYS
64
1_555
A
CYS
80
A
SG
CYS
80
1_555
disulf
2.301
A
CYS
76
A
SG
CYS
76
1_555
A
CYS
94
A
SG
CYS
94
1_555
HYDROLASE
HYDROLASE, O-GLYCOSYL, MASC, MULTIWAVELENGTH ANOMALOUS SOLVENT CONTRAST
LYSC_CHICK
UNP
1
1
P00698
MRSLLILVLCFLPLAALGKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRW
WCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
19
147
1BHZ
1
129
P00698
A
1
1
129
2
anti-parallel
A
THR
43
A
THR
43
A
ARG
45
A
ARG
45
A
THR
51
A
THR
51
A
TYR
53
A
TYR
53
96
P 43 21 2