0.027027
0.000000
0.000000
0.000000
0.017986
0.000000
0.000000
0.000000
0.012953
0.00000
0.00000
0.00000
Rouvinen, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
37.000
55.600
77.200
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
274
2337
2343
10.1074/jbc.274.4.2337
9891000
Probing the molecular basis of allergy. three-dimensional structure of the bovine lipocalin allergen Bos d 2.
1999
10.2210/pdb1bj7/pdb
pdb_00001bj7
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293
1
IMAGE PLATE
1998-01-08
RIGAKU
GRAPHITE(002)
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RUH2R
17867.984
D 2
1
man
polymer
18.015
water
76
nat
water
DANDER MAJOR ALLERGEN BDA20, DERMAL ALLERGEN BDA20
no
no
QETPAEIDPSKIPGEWRIIYAAADNKDKIVEGGPLRNYYRRIECINDCESLSITFYLKDQGTCLLLTEVAKRQEGYVYVL
EFYGTNTLEVIHVSENMLVTYVENYDGERITKMTEGLAKGTSFTPEELEKYQQLNSERGVPNENIENLIKTDNCPP
QETPAEIDPSKIPGEWRIIYAAADNKDKIVEGGPLRNYYRRIECINDCESLSITFYLKDQGTCLLLTEVAKRQEGYVYVL
EFYGTNTLEVIHVSENMLVTYVENYDGERITKMTEGLAKGTSFTPEELEKYQQLNSERGVPNENIENLIKTDNCPP
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
cattle
Bos
Pichia
sample
9913
Bos taurus
4922
Pichia pastoris
1
2.23
45
4
pH 4
database_2
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Database references
Refinement description
1
0
1999-05-11
1
1
2008-03-24
1
2
2011-07-13
1
3
2023-08-02
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
Y
BNL
1998-07-02
REL
REL
HOH
water
1MUP
PDB
experimental model
HOH
501
2
HOH
HOH
501
A
HOH
502
2
HOH
HOH
502
A
HOH
503
2
HOH
HOH
503
A
HOH
504
2
HOH
HOH
504
A
HOH
505
2
HOH
HOH
505
A
HOH
506
2
HOH
HOH
506
A
HOH
507
2
HOH
HOH
507
A
HOH
508
2
HOH
HOH
508
A
HOH
509
2
HOH
HOH
509
A
HOH
510
2
HOH
HOH
510
A
HOH
511
2
HOH
HOH
511
A
HOH
512
2
HOH
HOH
512
A
HOH
513
2
HOH
HOH
513
A
HOH
514
2
HOH
HOH
514
A
HOH
515
2
HOH
HOH
515
A
HOH
516
2
HOH
HOH
516
A
HOH
517
2
HOH
HOH
517
A
HOH
518
2
HOH
HOH
518
A
HOH
519
2
HOH
HOH
519
A
HOH
520
2
HOH
HOH
520
A
HOH
521
2
HOH
HOH
521
A
HOH
522
2
HOH
HOH
522
A
HOH
523
2
HOH
HOH
523
A
HOH
524
2
HOH
HOH
524
A
HOH
525
2
HOH
HOH
525
A
HOH
526
2
HOH
HOH
526
A
HOH
527
2
HOH
HOH
527
A
HOH
528
2
HOH
HOH
528
A
HOH
529
2
HOH
HOH
529
A
HOH
530
2
HOH
HOH
530
A
HOH
531
2
HOH
HOH
531
A
HOH
532
2
HOH
HOH
532
A
HOH
533
2
HOH
HOH
533
A
HOH
534
2
HOH
HOH
534
A
HOH
535
2
HOH
HOH
535
A
HOH
536
2
HOH
HOH
536
A
HOH
537
2
HOH
HOH
537
A
HOH
538
2
HOH
HOH
538
A
HOH
539
2
HOH
HOH
539
A
HOH
540
2
HOH
HOH
540
A
HOH
541
2
HOH
HOH
541
A
HOH
542
2
HOH
HOH
542
A
HOH
543
2
HOH
HOH
543
A
HOH
544
2
HOH
HOH
544
A
HOH
545
2
HOH
HOH
545
A
HOH
546
2
HOH
HOH
546
A
HOH
547
2
HOH
HOH
547
A
HOH
548
2
HOH
HOH
548
A
HOH
549
2
HOH
HOH
549
A
HOH
550
2
HOH
HOH
550
A
HOH
551
2
HOH
HOH
551
A
HOH
552
2
HOH
HOH
552
A
HOH
553
2
HOH
HOH
553
A
HOH
554
2
HOH
HOH
554
A
HOH
555
2
HOH
HOH
555
A
HOH
556
2
HOH
HOH
556
A
HOH
557
2
HOH
HOH
557
A
HOH
558
2
HOH
HOH
558
A
HOH
559
2
HOH
HOH
559
A
HOH
560
2
HOH
HOH
560
A
HOH
561
2
HOH
HOH
561
A
HOH
562
2
HOH
HOH
562
A
HOH
563
2
HOH
HOH
563
A
HOH
564
2
HOH
HOH
564
A
HOH
565
2
HOH
HOH
565
A
HOH
566
2
HOH
HOH
566
A
HOH
567
2
HOH
HOH
567
A
HOH
568
2
HOH
HOH
568
A
HOH
569
2
HOH
HOH
569
A
HOH
570
2
HOH
HOH
570
A
HOH
571
2
HOH
HOH
571
A
HOH
572
2
HOH
HOH
572
A
HOH
573
2
HOH
HOH
573
A
HOH
574
2
HOH
HOH
574
A
HOH
575
2
HOH
HOH
575
A
HOH
576
2
HOH
HOH
576
A
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
ILE
7
n
7
ILE
7
A
ASP
8
n
8
ASP
8
A
PRO
9
n
9
PRO
9
A
SER
10
n
10
SER
10
A
LYS
11
n
11
LYS
11
A
ILE
12
n
12
ILE
12
A
PRO
13
n
13
PRO
13
A
GLY
14
n
14
GLY
14
A
GLU
15
n
15
GLU
15
A
TRP
16
n
16
TRP
16
A
ARG
17
n
17
ARG
17
A
ILE
18
n
18
ILE
18
A
ILE
19
n
19
ILE
19
A
TYR
20
n
20
TYR
20
A
ALA
21
n
21
ALA
21
A
ALA
22
n
22
ALA
22
A
ALA
23
n
23
ALA
23
A
ASP
24
n
24
ASP
24
A
ASN
25
n
25
ASN
25
A
LYS
26
n
26
LYS
26
A
ASP
27
n
27
ASP
27
A
LYS
28
n
28
LYS
28
A
ILE
29
n
29
ILE
29
A
VAL
30
n
30
VAL
30
A
GLU
31
n
31
GLU
31
A
GLY
32
n
32
GLY
32
A
GLY
33
n
33
GLY
33
A
PRO
34
n
34
PRO
34
A
LEU
35
n
35
LEU
35
A
ARG
36
n
36
ARG
36
A
ASN
37
n
37
ASN
37
A
TYR
38
n
38
TYR
38
A
TYR
39
n
39
TYR
39
A
ARG
40
n
40
ARG
40
A
ARG
41
n
41
ARG
41
A
ILE
42
n
42
ILE
42
A
GLU
43
n
43
GLU
43
A
CYS
44
n
44
CYS
44
A
ILE
45
n
45
ILE
45
A
ASN
46
n
46
ASN
46
A
ASP
47
n
47
ASP
47
A
CYS
48
n
48
CYS
48
A
GLU
49
n
49
GLU
49
A
SER
50
n
50
SER
50
A
LEU
51
n
51
LEU
51
A
SER
52
n
52
SER
52
A
ILE
53
n
53
ILE
53
A
THR
54
n
54
THR
54
A
PHE
55
n
55
PHE
55
A
TYR
56
n
56
TYR
56
A
LEU
57
n
57
LEU
57
A
LYS
58
n
58
LYS
58
A
ASP
59
n
59
ASP
59
A
GLN
60
n
60
GLN
60
A
GLY
61
n
61
GLY
61
A
THR
62
n
62
THR
62
A
CYS
63
n
63
CYS
63
A
LEU
64
n
64
LEU
64
A
LEU
65
n
65
LEU
65
A
LEU
66
n
66
LEU
66
A
THR
67
n
67
THR
67
A
GLU
68
n
68
GLU
68
A
VAL
69
n
69
VAL
69
A
ALA
70
n
70
ALA
70
A
LYS
71
n
71
LYS
71
A
ARG
72
n
72
ARG
72
A
GLN
73
n
73
GLN
73
A
GLU
74
n
74
GLU
74
A
GLY
75
n
75
GLY
75
A
TYR
76
n
76
TYR
76
A
VAL
77
n
77
VAL
77
A
TYR
78
n
78
TYR
78
A
VAL
79
n
79
VAL
79
A
LEU
80
n
80
LEU
80
A
GLU
81
n
81
GLU
81
A
PHE
82
n
82
PHE
82
A
TYR
83
n
83
TYR
83
A
GLY
84
n
84
GLY
84
A
THR
85
n
85
THR
85
A
ASN
86
n
86
ASN
86
A
THR
87
n
87
THR
87
A
LEU
88
n
88
LEU
88
A
GLU
89
n
89
GLU
89
A
VAL
90
n
90
VAL
90
A
ILE
91
n
91
ILE
91
A
HIS
92
n
92
HIS
92
A
VAL
93
n
93
VAL
93
A
SER
94
n
94
SER
94
A
GLU
95
n
95
GLU
95
A
ASN
96
n
96
ASN
96
A
MET
97
n
97
MET
97
A
LEU
98
n
98
LEU
98
A
VAL
99
n
99
VAL
99
A
THR
100
n
100
THR
100
A
TYR
101
n
101
TYR
101
A
VAL
102
n
102
VAL
102
A
GLU
103
n
103
GLU
103
A
ASN
104
n
104
ASN
104
A
TYR
105
n
105
TYR
105
A
ASP
106
n
106
ASP
106
A
GLY
107
n
107
GLY
107
A
GLU
108
n
108
GLU
108
A
ARG
109
n
109
ARG
109
A
ILE
110
n
110
ILE
110
A
THR
111
n
111
THR
111
A
LYS
112
n
112
LYS
112
A
MET
113
n
113
MET
113
A
THR
114
n
114
THR
114
A
GLU
115
n
115
GLU
115
A
GLY
116
n
116
GLY
116
A
LEU
117
n
117
LEU
117
A
ALA
118
n
118
ALA
118
A
LYS
119
n
119
LYS
119
A
GLY
120
n
120
GLY
120
A
THR
121
n
121
THR
121
A
SER
122
n
122
SER
122
A
PHE
123
n
123
PHE
123
A
THR
124
n
124
THR
124
A
PRO
125
n
125
PRO
125
A
GLU
126
n
126
GLU
126
A
GLU
127
n
127
GLU
127
A
LEU
128
n
128
LEU
128
A
GLU
129
n
129
GLU
129
A
LYS
130
n
130
LYS
130
A
TYR
131
n
131
TYR
131
A
GLN
132
n
132
GLN
132
A
GLN
133
n
133
GLN
133
A
LEU
134
n
134
LEU
134
A
ASN
135
n
135
ASN
135
A
SER
136
n
136
SER
136
A
GLU
137
n
137
GLU
137
A
ARG
138
n
138
ARG
138
A
GLY
139
n
139
GLY
139
A
VAL
140
n
140
VAL
140
A
PRO
141
n
141
PRO
141
A
ASN
142
n
142
ASN
142
A
GLU
143
n
143
GLU
143
A
ASN
144
n
144
ASN
144
A
ILE
145
n
145
ILE
145
A
GLU
146
n
146
GLU
146
A
ASN
147
n
147
ASN
147
A
LEU
148
n
148
LEU
148
A
ILE
149
n
149
ILE
149
A
LYS
150
n
150
LYS
150
A
THR
151
n
151
THR
151
A
ASP
152
n
152
ASP
152
A
ASN
153
n
153
ASN
153
A
CYS
154
n
154
CYS
154
A
PRO
155
n
155
PRO
155
A
PRO
156
n
156
PRO
156
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLU
146
A
O
GLU
146
A
N
ALA
21
A
N
ALA
21
A
O
ARG
17
A
O
ARG
17
A
N
ALA
118
A
N
ALA
118
A
O
THR
111
A
O
THR
111
A
N
ASN
104
A
N
ASN
104
A
O
VAL
99
A
O
VAL
99
A
N
HIS
92
A
N
HIS
92
A
O
ASN
86
A
O
ASN
86
A
N
LEU
80
A
N
LEU
80
A
O
VAL
77
A
O
VAL
77
A
N
GLU
74
A
N
GLU
74
A
O
THR
62
A
O
THR
62
A
N
ASP
59
A
N
ASP
59
A
O
SER
50
A
O
SER
50
A
N
ILE
45
A
N
ILE
45
1
A
GLN
1
A
GLN
1
1
Y
1
A
GLU
2
A
GLU
2
1
Y
1
A
THR
3
A
THR
3
1
Y
1
A
PRO
4
A
PRO
4
1
Y
1
A
ALA
5
A
ALA
5
1
Y
1
A
GLU
6
A
GLU
6
1
Y
1
A
ARG
40
-131.97
-42.03
1
A
ASN
46
37.66
83.52
1
A
PHE
82
-163.65
110.40
24.7
0.232
0.184
0.184
1.8
8.0
1258
12707
10
92.3
RANDOM
100000000
0.001
1
THROUGHOUT
1
MOLECULAR REPLACEMENT
1MUP
1.8
8.0
76
1295
0
0
1219
0.009
1.6
27.7
1.3
1.8
99
1BJ7
41606
1
0.066
1
2.9
92.3
0.542
1.8
1.86
60.3
data reduction
DENZO
data scaling
SCALEPACK
model building
X-PLOR
3.8
refinement
X-PLOR
3.8
phasing
X-PLOR
3.8
BOVINE LIPOCALIN ALLERGEN BOS D 2
1
N
N
2
N
N
A
PRO
9
A
PRO
9
HELX_P
A
LYS
11
A
LYS
11
5
1
3
A
LYS
26
A
LYS
26
HELX_P
A
LYS
28
A
LYS
28
5
2
3
A
PRO
125
A
PRO
125
HELX_P
A
ARG
138
A
ARG
138
1
3
14
A
ASN
142
A
ASN
142
HELX_P
A
ASN
144
A
ASN
144
5
4
3
A
ILE
149
A
ILE
149
HELX_P
A
THR
151
A
THR
151
5
5
3
disulf
2.024
A
CYS
44
A
SG
CYS
44
1_555
A
CYS
48
A
SG
CYS
48
1_555
disulf
2.041
A
CYS
63
A
SG
CYS
63
1_555
A
CYS
154
A
SG
CYS
154
1_555
ALLERGEN
ALLERGEN, LIPOCALIN
ALL2_BOVIN
UNP
1
1
Q28133
MKAVFLTLLFGLVCTAQETPAEIDPSKIPGEWRIIYAAADNKDKIVEGGPLRNYYRRIECINDCESLSITFYLKDQGTCL
LLTEVAKRQEGYVYVLEFYGTNTLEVIHVSENMLVTYVENYDGERITKMTEGLAKGTSFTPEELEKYQQLNSERGVPNEN
IENLIKTDNCPP
17
172
1BJ7
1
156
Q28133
A
1
1
156
9
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
145
A
ILE
145
A
ASN
147
A
ASN
147
A
ARG
17
A
ARG
17
A
ALA
23
A
ALA
23
A
ILE
110
A
ILE
110
A
ALA
118
A
ALA
118
A
MET
97
A
MET
97
A
TYR
105
A
TYR
105
A
THR
85
A
THR
85
A
VAL
93
A
VAL
93
A
VAL
77
A
VAL
77
A
GLU
81
A
GLU
81
A
THR
62
A
THR
62
A
GLU
74
A
GLU
74
A
SER
50
A
SER
50
A
ASP
59
A
ASP
59
A
TYR
38
A
TYR
38
A
ILE
45
A
ILE
45
19
P 21 21 21