0.007519
0.000000
0.000000
0.000000
0.007519
0.000000
0.000000
0.000000
0.007519
0.00000
0.00000
0.00000
Sage, C.R.
Michelitsch, M.D.
Finer-Moore, J.
Stroud, R.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
24
90.00
90.00
90.00
133.000
133.000
133.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C6 H11 N O4 S
193.221
n
N-CARBOXYMETHIONINE
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C20 H21 N7 O6
455.424
5,10-METHYLENE-6-HYDROFOLIC ACID
non-polymer
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C9 H12 F N2 O8 P
326.172
5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
C
N
78
N
S
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
C
N
83
N
O
N
84
N
O
N
85
N
O
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
N
N
98
R
C
N
99
N
C
N
100
N
O
N
101
N
C
N
102
N
S
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
N
N
112
S
C
N
113
N
C
N
114
N
O
N
115
N
C
N
116
N
C
N
117
N
C
N
118
N
O
N
119
N
N
N
120
N
O
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
N
N
132
S
C
N
133
N
C
N
134
N
O
N
135
N
C
N
136
N
C
N
137
N
C
N
138
N
O
N
139
N
O
N
140
N
O
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
N
N
151
N
C
N
152
N
C
N
153
N
O
N
154
N
O
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
N
N
161
S
C
N
162
N
C
N
163
N
O
N
164
N
C
Y
165
N
C
Y
166
N
N
Y
167
N
C
Y
168
N
C
Y
169
N
N
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
O
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
S
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
N
N
229
S
C
N
230
N
C
N
231
N
O
N
232
N
C
N
233
N
C
N
234
N
C
N
235
N
C
N
236
N
N
N
237
N
O
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
N
N
254
S
C
N
255
N
C
N
256
N
O
N
257
N
C
N
258
N
C
N
259
N
S
N
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
Y
278
N
C
Y
279
N
C
Y
280
N
C
Y
281
N
C
Y
282
N
C
Y
283
N
C
N
284
N
O
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
N
N
297
S
C
N
298
N
C
N
299
N
O
N
300
N
C
N
301
N
C
N
302
N
C
N
303
N
O
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
N
N
314
S
C
N
315
N
C
N
316
N
O
N
317
N
C
N
318
N
O
N
319
N
O
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
N
N
328
S
C
N
329
N
C
N
330
N
O
N
331
R
C
N
332
N
O
N
333
N
C
N
334
N
O
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
Y
344
N
N
Y
345
N
C
N
346
N
N
Y
347
N
N
Y
348
N
C
N
349
N
O
Y
350
N
C
N
351
N
N
N
352
S
C
N
353
N
C
N
354
N
N
Y
355
N
C
N
356
N
C
N
357
N
N
Y
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
N
364
N
C
N
365
N
O
N
366
N
N
N
367
R
C
N
368
N
C
N
369
N
C
N
370
N
C
N
371
N
O
N
372
N
O
N
373
N
C
N
374
N
O
N
375
N
O
N
376
N
C
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
N
Y
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
C
N
412
N
O
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
N
N
426
S
C
N
427
N
C
N
428
N
O
N
429
N
C
Y
430
N
C
Y
431
N
C
Y
432
N
C
Y
433
N
C
Y
434
N
C
Y
435
N
C
N
436
N
O
N
437
N
O
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
N
N
450
N
C
N
451
N
N
N
452
N
C
N
453
N
C
N
454
N
C
N
455
N
O
N
456
N
O
N
457
N
F
N
458
R
C
N
459
N
C
N
460
S
C
N
461
R
C
N
462
N
O
N
463
N
O
N
464
N
C
N
465
N
O
N
466
N
P
N
467
N
O
N
468
N
O
N
469
N
O
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
N
N
483
S
C
N
484
N
C
N
485
N
O
N
486
N
C
N
487
N
C
N
488
N
C
N
489
N
O
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
doub
N
87
N
sing
N
88
N
doub
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
Y
162
N
sing
Y
163
N
doub
Y
164
N
doub
N
165
N
sing
Y
166
N
sing
N
167
N
sing
Y
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
doub
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
Y
270
N
doub
Y
271
N
sing
Y
272
N
sing
N
273
N
sing
Y
274
N
doub
N
275
N
sing
Y
276
N
doub
N
277
N
sing
Y
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
doub
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
doub
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
Y
328
N
sing
Y
329
N
sing
N
330
N
sing
N
331
N
sing
Y
332
N
doub
N
333
N
sing
N
334
N
sing
Y
335
N
sing
N
336
N
doub
Y
337
N
sing
N
338
N
sing
Y
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
Y
353
N
doub
Y
354
N
sing
N
355
N
sing
Y
356
N
sing
N
357
N
sing
Y
358
N
doub
N
359
N
sing
Y
360
N
sing
Y
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
doub
N
378
N
sing
N
379
N
sing
N
380
N
doub
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
doub
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
Y
396
N
doub
Y
397
N
sing
Y
398
N
sing
N
399
N
sing
Y
400
N
doub
Y
401
N
sing
Y
402
N
sing
N
403
N
sing
Y
404
N
sing
Y
405
N
doub
N
406
N
sing
Y
407
N
doub
N
408
N
sing
Y
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
doub
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
Y
424
N
doub
Y
425
N
sing
Y
426
N
sing
N
427
N
sing
Y
428
N
doub
N
429
N
sing
Y
430
N
doub
N
431
N
sing
Y
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
doub
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
doub
N
446
N
doub
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
doub
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
doub
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
37
13893
13901
10.1021/bi9810510
9753479
D221 in thymidylate synthase controls conformation change, and thereby opening of the imidazolidine.
1998
US
Faseb J.
FAJOEC
2074
0892-6638
7
671
Stereochemistry of a Multistep/Bipartite Methyl Transfer Reaction: Thymidylate Synthase
1993
US
Biochemistry
BICHAW
0033
0006-2960
29
6964
Structure, Multiple Site Binding, and Segmental Accommodation in Thymidylate Synthase on Binding Dump and an Anti-Folate
1990
US
Biochemistry
BICHAW
0033
0006-2960
29
10864
Erratum. Structure, Multiple Site Binding, and Segmental Accommodation in Thymidylate Synthase on Binding Dump and an Anti-Folate
1990
10.2210/pdb1bjg/pdb
pdb_00001bjg
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
294
1
IMAGE PLATE
1997-01
RIGAKU
GRAPHITE(002)
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU
30558.678
THYMIDYLATE SYNTHASE
2.1.1.45
D169N
1
nat
polymer
326.172
5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
1
syn
non-polymer
455.424
5,10-METHYLENE-6-HYDROFOLIC ACID
1
syn
non-polymer
18.015
water
92
nat
water
no
yes
(CXM)KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENN
VTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVAD
GKLSCQLYQRSCNVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKP
ESIFDYRFEDFEIEGYDPHPGIKAPVAI
MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIW
DEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLS
CQLYQRSCNVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF
DYRFEDFEIEGYDPHPGIKAPVAI
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
sample
X2913
562
Escherichia coli
PTHYA-D169N
1
3.21
60
7.7
pH 7.7
database_2
struct_conn
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Database references
Derived calculations
Data collection
Refinement description
1
0
1998-11-04
1
1
2008-03-24
1
2
2011-07-13
1
3
2021-11-03
1
4
2024-04-03
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1998-06-25
REL
UFP
5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
TMF
5,10-METHYLENE-6-HYDROFOLIC ACID
HOH
water
WILD TYPE E. COLI TS
Other
experimental model
UFP
266
2
UFP
UFP
266
A
TMF
267
3
TMF
TMF
267
A
HOH
268
4
HOH
HOH
268
A
HOH
269
4
HOH
HOH
269
A
HOH
270
4
HOH
HOH
270
A
HOH
271
4
HOH
HOH
271
A
HOH
272
4
HOH
HOH
272
A
HOH
273
4
HOH
HOH
273
A
HOH
274
4
HOH
HOH
274
A
HOH
275
4
HOH
HOH
275
A
HOH
276
4
HOH
HOH
276
A
HOH
277
4
HOH
HOH
277
A
HOH
278
4
HOH
HOH
278
A
HOH
279
4
HOH
HOH
279
A
HOH
280
4
HOH
HOH
280
A
HOH
281
4
HOH
HOH
281
A
HOH
282
4
HOH
HOH
282
A
HOH
283
4
HOH
HOH
283
A
HOH
284
4
HOH
HOH
284
A
HOH
285
4
HOH
HOH
285
A
HOH
286
4
HOH
HOH
286
A
HOH
287
4
HOH
HOH
287
A
HOH
288
4
HOH
HOH
288
A
HOH
289
4
HOH
HOH
289
A
HOH
290
4
HOH
HOH
290
A
HOH
291
4
HOH
HOH
291
A
HOH
292
4
HOH
HOH
292
A
HOH
293
4
HOH
HOH
293
A
HOH
294
4
HOH
HOH
294
A
HOH
295
4
HOH
HOH
295
A
HOH
296
4
HOH
HOH
296
A
HOH
297
4
HOH
HOH
297
A
HOH
298
4
HOH
HOH
298
A
HOH
299
4
HOH
HOH
299
A
HOH
300
4
HOH
HOH
300
A
HOH
301
4
HOH
HOH
301
A
HOH
302
4
HOH
HOH
302
A
HOH
303
4
HOH
HOH
303
A
HOH
304
4
HOH
HOH
304
A
HOH
305
4
HOH
HOH
305
A
HOH
306
4
HOH
HOH
306
A
HOH
307
4
HOH
HOH
307
A
HOH
308
4
HOH
HOH
308
A
HOH
309
4
HOH
HOH
309
A
HOH
310
4
HOH
HOH
310
A
HOH
311
4
HOH
HOH
311
A
HOH
312
4
HOH
HOH
312
A
HOH
313
4
HOH
HOH
313
A
HOH
314
4
HOH
HOH
314
A
HOH
315
4
HOH
HOH
315
A
HOH
316
4
HOH
HOH
316
A
HOH
317
4
HOH
HOH
317
A
HOH
318
4
HOH
HOH
318
A
HOH
319
4
HOH
HOH
319
A
HOH
320
4
HOH
HOH
320
A
HOH
321
4
HOH
HOH
321
A
HOH
322
4
HOH
HOH
322
A
HOH
323
4
HOH
HOH
323
A
HOH
324
4
HOH
HOH
324
A
HOH
325
4
HOH
HOH
325
A
HOH
326
4
HOH
HOH
326
A
HOH
327
4
HOH
HOH
327
A
HOH
328
4
HOH
HOH
328
A
HOH
329
4
HOH
HOH
329
A
HOH
330
4
HOH
HOH
330
A
HOH
331
4
HOH
HOH
331
A
HOH
332
4
HOH
HOH
332
A
HOH
333
4
HOH
HOH
333
A
HOH
334
4
HOH
HOH
334
A
HOH
335
4
HOH
HOH
335
A
HOH
336
4
HOH
HOH
336
A
HOH
337
4
HOH
HOH
337
A
HOH
338
4
HOH
HOH
338
A
HOH
339
4
HOH
HOH
339
A
HOH
341
4
HOH
HOH
341
A
HOH
342
4
HOH
HOH
342
A
HOH
343
4
HOH
HOH
343
A
HOH
344
4
HOH
HOH
344
A
HOH
345
4
HOH
HOH
345
A
HOH
346
4
HOH
HOH
346
A
HOH
347
4
HOH
HOH
347
A
HOH
348
4
HOH
HOH
348
A
HOH
349
4
HOH
HOH
349
A
HOH
350
4
HOH
HOH
350
A
HOH
351
4
HOH
HOH
351
A
HOH
352
4
HOH
HOH
352
A
HOH
353
4
HOH
HOH
353
A
HOH
354
4
HOH
HOH
354
A
HOH
355
4
HOH
HOH
355
A
HOH
356
4
HOH
HOH
356
A
HOH
357
4
HOH
HOH
357
A
HOH
359
4
HOH
HOH
359
A
HOH
360
4
HOH
HOH
360
A
HOH
361
4
HOH
HOH
361
A
CXM
1
n
1
CXM
1
A
LYS
2
n
2
LYS
2
A
GLN
3
n
3
GLN
3
A
TYR
4
n
4
TYR
4
A
LEU
5
n
5
LEU
5
A
GLU
6
n
6
GLU
6
A
LEU
7
n
7
LEU
7
A
MET
8
n
8
MET
8
A
GLN
9
n
9
GLN
9
A
LYS
10
n
10
LYS
10
A
VAL
11
n
11
VAL
11
A
LEU
12
n
12
LEU
12
A
ASP
13
n
13
ASP
13
A
GLU
14
n
14
GLU
14
A
GLY
15
n
15
GLY
15
A
THR
16
n
16
THR
16
A
GLN
17
n
17
GLN
17
A
LYS
18
n
18
LYS
18
A
ASN
19
n
19
ASN
19
A
ASP
20
n
20
ASP
20
A
ARG
21
n
21
ARG
21
A
THR
22
n
22
THR
22
A
GLY
23
n
23
GLY
23
A
THR
24
n
24
THR
24
A
GLY
25
n
25
GLY
25
A
THR
26
n
26
THR
26
A
LEU
27
n
27
LEU
27
A
SER
28
n
28
SER
28
A
ILE
29
n
29
ILE
29
A
PHE
30
n
30
PHE
30
A
GLY
31
n
31
GLY
31
A
HIS
32
n
32
HIS
32
A
GLN
33
n
33
GLN
33
A
MET
34
n
34
MET
34
A
ARG
35
n
35
ARG
35
A
PHE
36
n
36
PHE
36
A
ASN
37
n
37
ASN
37
A
LEU
38
n
38
LEU
38
A
GLN
39
n
39
GLN
39
A
ASP
40
n
40
ASP
40
A
GLY
41
n
41
GLY
41
A
PHE
42
n
42
PHE
42
A
PRO
43
n
43
PRO
43
A
LEU
44
n
44
LEU
44
A
VAL
45
n
45
VAL
45
A
THR
46
n
46
THR
46
A
THR
47
n
47
THR
47
A
LYS
48
n
48
LYS
48
A
ARG
49
n
49
ARG
49
A
CYS
50
n
50
CYS
50
A
HIS
51
n
51
HIS
51
A
LEU
52
n
52
LEU
52
A
ARG
53
n
53
ARG
53
A
SER
54
n
54
SER
54
A
ILE
55
n
55
ILE
55
A
ILE
56
n
56
ILE
56
A
HIS
57
n
57
HIS
57
A
GLU
58
n
58
GLU
58
A
LEU
59
n
59
LEU
59
A
LEU
60
n
60
LEU
60
A
TRP
61
n
61
TRP
61
A
PHE
62
n
62
PHE
62
A
LEU
63
n
63
LEU
63
A
GLN
64
n
64
GLN
64
A
GLY
65
n
65
GLY
65
A
ASP
66
n
66
ASP
66
A
THR
67
n
67
THR
67
A
ASN
68
n
68
ASN
68
A
ILE
69
n
69
ILE
69
A
ALA
70
n
70
ALA
70
A
TYR
71
n
71
TYR
71
A
LEU
72
n
72
LEU
72
A
HIS
73
n
73
HIS
73
A
GLU
74
n
74
GLU
74
A
ASN
75
n
75
ASN
75
A
ASN
76
n
76
ASN
76
A
VAL
77
n
77
VAL
77
A
THR
78
n
78
THR
78
A
ILE
79
n
79
ILE
79
A
TRP
80
n
80
TRP
80
A
ASP
81
n
81
ASP
81
A
GLU
82
n
82
GLU
82
A
TRP
83
n
83
TRP
83
A
ALA
84
n
84
ALA
84
A
ASP
85
n
85
ASP
85
A
GLU
86
n
86
GLU
86
A
ASN
87
n
87
ASN
87
A
GLY
88
n
88
GLY
88
A
ASP
89
n
89
ASP
89
A
LEU
90
n
90
LEU
90
A
GLY
91
n
91
GLY
91
A
PRO
92
n
92
PRO
92
A
VAL
93
n
93
VAL
93
A
TYR
94
n
94
TYR
94
A
GLY
95
n
95
GLY
95
A
LYS
96
n
96
LYS
96
A
GLN
97
n
97
GLN
97
A
TRP
98
n
98
TRP
98
A
ARG
99
n
99
ARG
99
A
ALA
100
n
100
ALA
100
A
TRP
101
n
101
TRP
101
A
PRO
102
n
102
PRO
102
A
THR
103
n
103
THR
103
A
PRO
104
n
104
PRO
104
A
ASP
105
n
105
ASP
105
A
GLY
106
n
106
GLY
106
A
ARG
107
n
107
ARG
107
A
HIS
108
n
108
HIS
108
A
ILE
109
n
109
ILE
109
A
ASP
110
n
110
ASP
110
A
GLN
111
n
111
GLN
111
A
ILE
112
n
112
ILE
112
A
THR
113
n
113
THR
113
A
THR
114
n
114
THR
114
A
VAL
115
n
115
VAL
115
A
LEU
116
n
116
LEU
116
A
ASN
117
n
117
ASN
117
A
GLN
118
n
118
GLN
118
A
LEU
119
n
119
LEU
119
A
LYS
120
n
120
LYS
120
A
ASN
121
n
121
ASN
121
A
ASP
122
n
122
ASP
122
A
PRO
123
n
123
PRO
123
A
ASP
124
n
124
ASP
124
A
SER
125
n
125
SER
125
A
ARG
126
n
126
ARG
126
A
ARG
127
n
127
ARG
127
A
ILE
128
n
128
ILE
128
A
ILE
129
n
129
ILE
129
A
VAL
130
n
130
VAL
130
A
SER
131
n
131
SER
131
A
ALA
132
n
132
ALA
132
A
TRP
133
n
133
TRP
133
A
ASN
134
n
134
ASN
134
A
VAL
135
n
135
VAL
135
A
GLY
136
n
136
GLY
136
A
GLU
137
n
137
GLU
137
A
LEU
138
n
138
LEU
138
A
ASP
139
n
139
ASP
139
A
LYS
140
n
140
LYS
140
A
MET
141
n
141
MET
141
A
ALA
142
n
142
ALA
142
A
LEU
143
n
143
LEU
143
A
ALA
144
n
144
ALA
144
A
PRO
145
n
145
PRO
145
A
CYS
146
n
146
CYS
146
A
HIS
147
n
147
HIS
147
A
ALA
148
n
148
ALA
148
A
PHE
149
n
149
PHE
149
A
PHE
150
n
150
PHE
150
A
GLN
151
n
151
GLN
151
A
PHE
152
n
152
PHE
152
A
TYR
153
n
153
TYR
153
A
VAL
154
n
154
VAL
154
A
ALA
155
n
155
ALA
155
A
ASP
156
n
156
ASP
156
A
GLY
157
n
157
GLY
157
A
LYS
158
n
158
LYS
158
A
LEU
159
n
159
LEU
159
A
SER
160
n
160
SER
160
A
CYS
161
n
161
CYS
161
A
GLN
162
n
162
GLN
162
A
LEU
163
n
163
LEU
163
A
TYR
164
n
164
TYR
164
A
GLN
165
n
165
GLN
165
A
ARG
166
n
166
ARG
166
A
SER
167
n
167
SER
167
A
CYS
168
n
168
CYS
168
A
ASN
169
n
169
ASN
169
A
VAL
170
n
170
VAL
170
A
PHE
171
n
171
PHE
171
A
LEU
172
n
172
LEU
172
A
GLY
173
n
173
GLY
173
A
LEU
174
n
174
LEU
174
A
PRO
175
n
175
PRO
175
A
PHE
176
n
176
PHE
176
A
ASN
177
n
177
ASN
177
A
ILE
178
n
178
ILE
178
A
ALA
179
n
179
ALA
179
A
SER
180
n
180
SER
180
A
TYR
181
n
181
TYR
181
A
ALA
182
n
182
ALA
182
A
LEU
183
n
183
LEU
183
A
LEU
184
n
184
LEU
184
A
VAL
185
n
185
VAL
185
A
HIS
186
n
186
HIS
186
A
MET
187
n
187
MET
187
A
MET
188
n
188
MET
188
A
ALA
189
n
189
ALA
189
A
GLN
190
n
190
GLN
190
A
GLN
191
n
191
GLN
191
A
CYS
192
n
192
CYS
192
A
ASP
193
n
193
ASP
193
A
LEU
194
n
194
LEU
194
A
GLU
195
n
195
GLU
195
A
VAL
196
n
196
VAL
196
A
GLY
197
n
197
GLY
197
A
ASP
198
n
198
ASP
198
A
PHE
199
n
199
PHE
199
A
VAL
200
n
200
VAL
200
A
TRP
201
n
201
TRP
201
A
THR
202
n
202
THR
202
A
GLY
203
n
203
GLY
203
A
GLY
204
n
204
GLY
204
A
ASP
205
n
205
ASP
205
A
THR
206
n
206
THR
206
A
HIS
207
n
207
HIS
207
A
LEU
208
n
208
LEU
208
A
TYR
209
n
209
TYR
209
A
SER
210
n
210
SER
210
A
ASN
211
n
211
ASN
211
A
HIS
212
n
212
HIS
212
A
MET
213
n
213
MET
213
A
ASP
214
n
214
ASP
214
A
GLN
215
n
215
GLN
215
A
THR
216
n
216
THR
216
A
HIS
217
n
217
HIS
217
A
LEU
218
n
218
LEU
218
A
GLN
219
n
219
GLN
219
A
LEU
220
n
220
LEU
220
A
SER
221
n
221
SER
221
A
ARG
222
n
222
ARG
222
A
GLU
223
n
223
GLU
223
A
PRO
224
n
224
PRO
224
A
ARG
225
n
225
ARG
225
A
PRO
226
n
226
PRO
226
A
LEU
227
n
227
LEU
227
A
PRO
228
n
228
PRO
228
A
LYS
229
n
229
LYS
229
A
LEU
230
n
230
LEU
230
A
ILE
231
n
231
ILE
231
A
ILE
232
n
232
ILE
232
A
LYS
233
n
233
LYS
233
A
ARG
234
n
234
ARG
234
A
LYS
235
n
235
LYS
235
A
PRO
236
n
236
PRO
236
A
GLU
237
n
237
GLU
237
A
SER
238
n
238
SER
238
A
ILE
239
n
239
ILE
239
A
PHE
240
n
240
PHE
240
A
ASP
241
n
241
ASP
241
A
TYR
242
n
242
TYR
242
A
ARG
243
n
243
ARG
243
A
PHE
244
n
244
PHE
244
A
GLU
245
n
245
GLU
245
A
ASP
246
n
246
ASP
246
A
PHE
247
n
247
PHE
247
A
GLU
248
n
248
GLU
248
A
ILE
249
n
249
ILE
249
A
GLU
250
n
250
GLU
250
A
GLY
251
n
251
GLY
251
A
TYR
252
n
252
TYR
252
A
ASP
253
n
253
ASP
253
A
PRO
254
n
254
PRO
254
A
HIS
255
n
255
HIS
255
A
PRO
256
n
256
PRO
256
A
GLY
257
n
257
GLY
257
A
ILE
258
n
258
ILE
258
A
LYS
259
n
259
LYS
259
A
ALA
260
n
260
ALA
260
A
PRO
261
n
261
PRO
261
A
VAL
262
n
262
VAL
262
A
ALA
263
n
263
ALA
263
A
ILE
264
n
264
ILE
264
A
author_and_software_defined_assembly
PISA,PQS
2
dimeric
7600
-17
19670
A
CXM
1
N-CARBOXYMETHIONINE
A
CXM
1
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
15_556
-x+1/2,y,-z+1
crystal symmetry operation
66.5000000000
0.0000000000
133.0000000000
A
O
THR
16
A
O
THR
16
A
N
SER
28
A
N
SER
28
A
O
LEU
27
A
O
LEU
27
A
N
LEU
208
A
N
LEU
208
A
O
ASP
205
A
O
ASP
205
A
N
CYS
168
A
N
CYS
168
A
O
HIS
32
A
O
HIS
32
A
N
GLY
203
A
N
GLY
203
A
O
VAL
200
A
O
VAL
200
A
N
CYS
161
A
N
CYS
161
A
O
LYS
158
A
O
LYS
158
A
N
ALA
155
A
N
ALA
155
A
O
PHE
150
A
O
PHE
150
A
N
VAL
130
A
N
VAL
130
A
O
LYS
229
A
O
LYS
229
A
N
GLU
250
A
N
GLU
250
1
A
HOH
296
D
HOH
1
A
HOH
337
D
HOH
1
A
A
CA
CB
CYS
CYS
168
168
-0.080
0.013
1.526
1.446
N
1
A
THR
22
-78.07
-101.63
1
A
PRO
43
-69.29
64.85
1
A
TYR
94
-19.36
-75.62
1
A
ALA
100
-155.89
59.29
1
A
ASP
122
-150.32
63.13
1
A
PRO
228
-74.28
-169.92
PARHCSDX.PRO
TOPH19CSDX.PRO
PARAM11.WAT
TOPH11.WAT
PARAMED.LIG
TOPO.FDUMP
PARAM_F.LIG
TOPO_CLOSED.THF
26.3
0.2340000
0.006
0.1900000
0.1900000
2.3
7.
1514
15110
10.0
82.1
RANDOM
100000000.
0.001
1
RESTRAINED
THROUGHOUT
2.0
MOLECULAR REPLACEMENT
WILD TYPE E. COLI TS
0.29
0.23
5.00
0.24
2.3
7.
92
2299
54
0
2153
0.017
1.8
24.0
1.3
3.17
1.50
4.53
2.00
4.37
1.50
6.36
2.00
0.3030000
0.019
0.2420000
2.44
249
1982
6
11.2
75.5
30.3
2.3
1BJG
16757
0.0750000
0.0750000
1
10.4
4.0
94.9
0.2500000
2.3
2.37
3.6
0.2500000
1
2.9
90.1
phasing
AMoRE
model building
X-PLOR
refinement
X-PLOR
3.1
data reduction
DENZO
data scaling
SCALEPACK
phasing
X-PLOR
D221(169)N MUTANT DOES NOT PROMOTE OPENING OF THE COFACTOR IMIDAZOLIDINE RING
1
N
N
2
N
N
3
N
N
4
N
N
A
LYS
2
A
LYS
2
HELX_P
A
GLU
14
A
GLU
14
1
1
13
A
LEU
38
A
LEU
38
HELX_P
A
ASP
40
A
ASP
40
5
2
3
A
LEU
52
A
LEU
52
HELX_P
A
GLN
64
A
GLN
64
1
3
13
A
ILE
69
A
ILE
69
HELX_P
A
ASN
75
A
ASN
75
5
4
7
A
ASP
81
A
ASP
81
HELX_P
A
TRP
83
A
TRP
83
5
5
3
A
TYR
94
A
TYR
94
HELX_P
A
ALA
100
A
ALA
100
1
6
7
A
GLN
111
A
GLN
111
HELX_P
A
ASN
121
A
ASN
121
1
7
11
A
VAL
135
A
VAL
135
HELX_P
A
LYS
140
A
LYS
140
5
8
6
A
GLY
173
A
GLY
173
HELX_P
A
GLN
191
A
GLN
191
1
9
19
A
SER
210
A
SER
210
HELX_P
A
SER
221
A
SER
221
5
10
12
A
ILE
239
A
ILE
239
HELX_P
A
ASP
241
A
ASP
241
5
11
3
A
PHE
244
A
PHE
244
HELX_P
A
ASP
246
A
ASP
246
5
12
3
covale
1.326
both
A
CXM
1
A
C
CXM
1
1_555
A
LYS
2
A
N
LYS
2
1_555
covale
1.842
none
A
CYS
146
A
SG
CYS
146
1_555
A
UFP
266
B
C6
UFP
1_555
covale
2.164
none
B
A
UFP
266
B
F5
UFP
1_555
A
TMF
267
C
N1
TMF
1_555
covale
1.387
none
B
A
UFP
266
B
F5
UFP
1_555
A
TMF
267
C
C2
TMF
1_555
covale
1.903
none
B
A
UFP
266
B
F5
UFP
1_555
A
TMF
267
C
NA2
TMF
1_555
covale
1.786
none
B
A
UFP
266
B
F5
UFP
1_555
A
TMF
267
C
N3
TMF
1_555
TRANSFERASE
TRANSFERASE, ACTIVE SITE MUTANT, REACTION INTERMEDIATE METHYLTRANSFERASE
TYSY_ECOLI
UNP
1
1
P0A884
MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIW
DEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLS
CQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF
DYRFEDFEIEGYDPHPGIKAPVAI
2
264
1BJG
2
264
P0A884
A
1
2
264
1
ASP
engineered mutation
ASN
169
1BJG
A
P0A884
UNP
169
169
4
5
2
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
THR
16
A
THR
16
A
LYS
18
A
LYS
18
A
THR
26
A
THR
26
A
PHE
30
A
PHE
30
A
ASP
205
A
ASP
205
A
TYR
209
A
TYR
209
A
SER
167
A
SER
167
A
ASN
169
A
ASN
169
A
HIS
32
A
HIS
32
A
ASN
37
A
ASN
37
A
ASP
198
A
ASP
198
A
GLY
203
A
GLY
203
A
LYS
158
A
LYS
158
A
GLN
165
A
GLN
165
A
HIS
147
A
HIS
147
A
ALA
155
A
ALA
155
A
ILE
129
A
ILE
129
A
SER
131
A
SER
131
A
LYS
229
A
LYS
229
A
ILE
232
A
ILE
232
A
PHE
247
A
PHE
247
A
GLU
250
A
GLU
250
BINDING SITE FOR RESIDUE UFP A 266
A
UFP
266
Software
15
BINDING SITE FOR RESIDUE TMF A 267
A
TMF
267
Software
18
A
ARG
21
A
ARG
21
15
1_555
A
TYR
94
A
TYR
94
15
1_555
A
ARG
126
A
ARG
126
15
15_556
A
ARG
127
A
ARG
127
15
15_556
A
CYS
146
A
CYS
146
15
1_555
A
HIS
147
A
HIS
147
15
1_555
A
GLN
165
A
GLN
165
15
1_555
A
ARG
166
A
ARG
166
15
1_555
A
SER
167
A
SER
167
15
1_555
A
CYS
168
A
CYS
168
15
1_555
A
ASN
169
A
ASN
169
15
1_555
A
ASN
177
A
ASN
177
15
1_555
A
HIS
207
A
HIS
207
15
1_555
A
TMF
267
C
TMF
15
1_555
A
HOH
301
D
HOH
15
1_555
A
LYS
48
A
LYS
48
18
1_555
A
CYS
50
A
CYS
50
18
1_555
A
HIS
51
A
HIS
51
18
1_555
A
SER
54
A
SER
54
18
1_555
A
GLU
58
A
GLU
58
18
1_555
A
ILE
79
A
ILE
79
18
1_555
A
TRP
80
A
TRP
80
18
1_555
A
TRP
83
A
TRP
83
18
1_555
A
TYR
94
A
TYR
94
18
1_555
A
LEU
143
A
LEU
143
18
1_555
A
CYS
146
A
CYS
146
18
1_555
A
HIS
147
A
HIS
147
18
1_555
A
ASN
169
A
ASN
169
18
1_555
A
LEU
172
A
LEU
172
18
1_555
A
GLY
173
A
GLY
173
18
1_555
A
PHE
176
A
PHE
176
18
1_555
A
TYR
209
A
TYR
209
18
1_555
A
UFP
266
B
UFP
18
1_555
199
I 21 3