0.007519 0.000000 0.000000 0.000000 0.007519 0.000000 0.000000 0.000000 0.007519 0.00000 0.00000 0.00000 Sage, C.R. Michelitsch, M.D. Finer-Moore, J. Stroud, R.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 24 90.00 90.00 90.00 133.000 133.000 133.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C6 H11 N O4 S 193.221 n N-CARBOXYMETHIONINE L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C20 H21 N7 O6 455.424 5,10-METHYLENE-6-HYDROFOLIC ACID non-polymer C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C9 H12 F N2 O8 P 326.172 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE DNA linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N C N 78 N S N 79 N C N 80 N C N 81 N O N 82 N C N 83 N O N 84 N O N 85 N O N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N N N 98 R C N 99 N C N 100 N O N 101 N C N 102 N S N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N N N 112 S C N 113 N C N 114 N O N 115 N C N 116 N C N 117 N C N 118 N O N 119 N N N 120 N O N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N N N 132 S C N 133 N C N 134 N O N 135 N C N 136 N C N 137 N C N 138 N O N 139 N O N 140 N O N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N N N 151 N C N 152 N C N 153 N O N 154 N O N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N N N 161 S C N 162 N C N 163 N O N 164 N C Y 165 N C Y 166 N N Y 167 N C Y 168 N C Y 169 N N N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N O N 182 N H N 183 N H N 184 N N N 185 S C N 186 N C N 187 N O N 188 S C N 189 N C N 190 N C N 191 N C N 192 N O N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N N N 207 S C N 208 N C N 209 N O N 210 N C N 211 N C N 212 N C N 213 N C N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N N N 229 S C N 230 N C N 231 N O N 232 N C N 233 N C N 234 N C N 235 N C N 236 N N N 237 N O N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N N N 254 S C N 255 N C N 256 N O N 257 N C N 258 N C N 259 N S N 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C Y 278 N C Y 279 N C Y 280 N C Y 281 N C Y 282 N C Y 283 N C N 284 N O N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N N N 297 S C N 298 N C N 299 N O N 300 N C N 301 N C N 302 N C N 303 N O N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N N N 314 S C N 315 N C N 316 N O N 317 N C N 318 N O N 319 N O N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N N N 328 S C N 329 N C N 330 N O N 331 R C N 332 N O N 333 N C N 334 N O N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H Y 344 N N Y 345 N C N 346 N N Y 347 N N Y 348 N C N 349 N O Y 350 N C N 351 N N N 352 S C N 353 N C N 354 N N Y 355 N C N 356 N C N 357 N N Y 358 N C Y 359 N C Y 360 N C Y 361 N C Y 362 N C Y 363 N C N 364 N C N 365 N O N 366 N N N 367 R C N 368 N C N 369 N C N 370 N C N 371 N O N 372 N O N 373 N C N 374 N O N 375 N O N 376 N C N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N N N 399 S C N 400 N C N 401 N O N 402 N C Y 403 N C Y 404 N C Y 405 N C Y 406 N N Y 407 N C Y 408 N C Y 409 N C Y 410 N C Y 411 N C N 412 N O N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N N N 426 S C N 427 N C N 428 N O N 429 N C Y 430 N C Y 431 N C Y 432 N C Y 433 N C Y 434 N C Y 435 N C N 436 N O N 437 N O N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N N N 450 N C N 451 N N N 452 N C N 453 N C N 454 N C N 455 N O N 456 N O N 457 N F N 458 R C N 459 N C N 460 S C N 461 R C N 462 N O N 463 N O N 464 N C N 465 N O N 466 N P N 467 N O N 468 N O N 469 N O N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 482 N N N 483 S C N 484 N C N 485 N O N 486 N C N 487 N C N 488 N C N 489 N O N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N doub N 87 N sing N 88 N doub N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N doub N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N doub N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N doub N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N doub N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N doub N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N doub N 158 N sing N 159 N sing N 160 N sing N 161 N sing Y 162 N sing Y 163 N doub Y 164 N doub N 165 N sing Y 166 N sing N 167 N sing Y 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N doub N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N doub N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N doub N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing Y 270 N doub Y 271 N sing Y 272 N sing N 273 N sing Y 274 N doub N 275 N sing Y 276 N doub N 277 N sing Y 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N doub N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N doub N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N doub N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing Y 328 N sing Y 329 N sing N 330 N sing N 331 N sing Y 332 N doub N 333 N sing N 334 N sing Y 335 N sing N 336 N doub Y 337 N sing N 338 N sing Y 339 N doub N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N doub N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing Y 353 N doub Y 354 N sing N 355 N sing Y 356 N sing N 357 N sing Y 358 N doub N 359 N sing Y 360 N sing Y 361 N doub N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N doub N 378 N sing N 379 N sing N 380 N doub N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N doub N 392 N sing N 393 N sing N 394 N sing N 395 N sing Y 396 N doub Y 397 N sing Y 398 N sing N 399 N sing Y 400 N doub Y 401 N sing Y 402 N sing N 403 N sing Y 404 N sing Y 405 N doub N 406 N sing Y 407 N doub N 408 N sing Y 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N doub N 420 N sing N 421 N sing N 422 N sing N 423 N sing Y 424 N doub Y 425 N sing Y 426 N sing N 427 N sing Y 428 N doub N 429 N sing Y 430 N doub N 431 N sing Y 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N doub N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N doub N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N doub N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N doub N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing US Biochemistry BICHAW 0033 0006-2960 37 13893 13901 10.1021/bi9810510 9753479 D221 in thymidylate synthase controls conformation change, and thereby opening of the imidazolidine. 1998 US Faseb J. FAJOEC 2074 0892-6638 7 671 Stereochemistry of a Multistep/Bipartite Methyl Transfer Reaction: Thymidylate Synthase 1993 US Biochemistry BICHAW 0033 0006-2960 29 6964 Structure, Multiple Site Binding, and Segmental Accommodation in Thymidylate Synthase on Binding Dump and an Anti-Folate 1990 US Biochemistry BICHAW 0033 0006-2960 29 10864 Erratum. Structure, Multiple Site Binding, and Segmental Accommodation in Thymidylate Synthase on Binding Dump and an Anti-Folate 1990 10.2210/pdb1bjg/pdb pdb_00001bjg 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 294 1 IMAGE PLATE 1997-01 RIGAKU GRAPHITE(002) M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU 30558.678 THYMIDYLATE SYNTHASE 2.1.1.45 D169N 1 nat polymer 326.172 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE 1 syn non-polymer 455.424 5,10-METHYLENE-6-HYDROFOLIC ACID 1 syn non-polymer 18.015 water 92 nat water no yes (CXM)KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENN VTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVAD GKLSCQLYQRSCNVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKP ESIFDYRFEDFEIEGYDPHPGIKAPVAI MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIW DEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLS CQLYQRSCNVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF DYRFEDFEIEGYDPHPGIKAPVAI A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia sample X2913 562 Escherichia coli PTHYA-D169N 1 3.21 60 7.7 pH 7.7 database_2 struct_conn struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Derived calculations Version format compliance Database references Derived calculations Data collection Refinement description 1 0 1998-11-04 1 1 2008-03-24 1 2 2011-07-13 1 3 2021-11-03 1 4 2024-04-03 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1998-06-25 REL UFP 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE TMF 5,10-METHYLENE-6-HYDROFOLIC ACID HOH water WILD TYPE E. COLI TS Other experimental model UFP 266 2 UFP UFP 266 A TMF 267 3 TMF TMF 267 A HOH 268 4 HOH HOH 268 A HOH 269 4 HOH HOH 269 A HOH 270 4 HOH HOH 270 A HOH 271 4 HOH HOH 271 A HOH 272 4 HOH HOH 272 A HOH 273 4 HOH HOH 273 A HOH 274 4 HOH HOH 274 A HOH 275 4 HOH HOH 275 A HOH 276 4 HOH HOH 276 A HOH 277 4 HOH HOH 277 A HOH 278 4 HOH HOH 278 A HOH 279 4 HOH HOH 279 A HOH 280 4 HOH HOH 280 A HOH 281 4 HOH HOH 281 A HOH 282 4 HOH HOH 282 A HOH 283 4 HOH HOH 283 A HOH 284 4 HOH HOH 284 A HOH 285 4 HOH HOH 285 A HOH 286 4 HOH HOH 286 A HOH 287 4 HOH HOH 287 A HOH 288 4 HOH HOH 288 A HOH 289 4 HOH HOH 289 A HOH 290 4 HOH HOH 290 A HOH 291 4 HOH HOH 291 A HOH 292 4 HOH HOH 292 A HOH 293 4 HOH HOH 293 A HOH 294 4 HOH HOH 294 A HOH 295 4 HOH HOH 295 A HOH 296 4 HOH HOH 296 A HOH 297 4 HOH HOH 297 A HOH 298 4 HOH HOH 298 A HOH 299 4 HOH HOH 299 A HOH 300 4 HOH HOH 300 A HOH 301 4 HOH HOH 301 A HOH 302 4 HOH HOH 302 A HOH 303 4 HOH HOH 303 A HOH 304 4 HOH HOH 304 A HOH 305 4 HOH HOH 305 A HOH 306 4 HOH HOH 306 A HOH 307 4 HOH HOH 307 A HOH 308 4 HOH HOH 308 A HOH 309 4 HOH HOH 309 A HOH 310 4 HOH HOH 310 A HOH 311 4 HOH HOH 311 A HOH 312 4 HOH HOH 312 A HOH 313 4 HOH HOH 313 A HOH 314 4 HOH HOH 314 A HOH 315 4 HOH HOH 315 A HOH 316 4 HOH HOH 316 A HOH 317 4 HOH HOH 317 A HOH 318 4 HOH HOH 318 A HOH 319 4 HOH HOH 319 A HOH 320 4 HOH HOH 320 A HOH 321 4 HOH HOH 321 A HOH 322 4 HOH HOH 322 A HOH 323 4 HOH HOH 323 A HOH 324 4 HOH HOH 324 A HOH 325 4 HOH HOH 325 A HOH 326 4 HOH HOH 326 A HOH 327 4 HOH HOH 327 A HOH 328 4 HOH HOH 328 A HOH 329 4 HOH HOH 329 A HOH 330 4 HOH HOH 330 A HOH 331 4 HOH HOH 331 A HOH 332 4 HOH HOH 332 A HOH 333 4 HOH HOH 333 A HOH 334 4 HOH HOH 334 A HOH 335 4 HOH HOH 335 A HOH 336 4 HOH HOH 336 A HOH 337 4 HOH HOH 337 A HOH 338 4 HOH HOH 338 A HOH 339 4 HOH HOH 339 A HOH 341 4 HOH HOH 341 A HOH 342 4 HOH HOH 342 A HOH 343 4 HOH HOH 343 A HOH 344 4 HOH HOH 344 A HOH 345 4 HOH HOH 345 A HOH 346 4 HOH HOH 346 A HOH 347 4 HOH HOH 347 A HOH 348 4 HOH HOH 348 A HOH 349 4 HOH HOH 349 A HOH 350 4 HOH HOH 350 A HOH 351 4 HOH HOH 351 A HOH 352 4 HOH HOH 352 A HOH 353 4 HOH HOH 353 A HOH 354 4 HOH HOH 354 A HOH 355 4 HOH HOH 355 A HOH 356 4 HOH HOH 356 A HOH 357 4 HOH HOH 357 A HOH 359 4 HOH HOH 359 A HOH 360 4 HOH HOH 360 A HOH 361 4 HOH HOH 361 A CXM 1 n 1 CXM 1 A LYS 2 n 2 LYS 2 A GLN 3 n 3 GLN 3 A TYR 4 n 4 TYR 4 A LEU 5 n 5 LEU 5 A GLU 6 n 6 GLU 6 A LEU 7 n 7 LEU 7 A MET 8 n 8 MET 8 A GLN 9 n 9 GLN 9 A LYS 10 n 10 LYS 10 A VAL 11 n 11 VAL 11 A LEU 12 n 12 LEU 12 A ASP 13 n 13 ASP 13 A GLU 14 n 14 GLU 14 A GLY 15 n 15 GLY 15 A THR 16 n 16 THR 16 A GLN 17 n 17 GLN 17 A LYS 18 n 18 LYS 18 A ASN 19 n 19 ASN 19 A ASP 20 n 20 ASP 20 A ARG 21 n 21 ARG 21 A THR 22 n 22 THR 22 A GLY 23 n 23 GLY 23 A THR 24 n 24 THR 24 A GLY 25 n 25 GLY 25 A THR 26 n 26 THR 26 A LEU 27 n 27 LEU 27 A SER 28 n 28 SER 28 A ILE 29 n 29 ILE 29 A PHE 30 n 30 PHE 30 A GLY 31 n 31 GLY 31 A HIS 32 n 32 HIS 32 A GLN 33 n 33 GLN 33 A MET 34 n 34 MET 34 A ARG 35 n 35 ARG 35 A PHE 36 n 36 PHE 36 A ASN 37 n 37 ASN 37 A LEU 38 n 38 LEU 38 A GLN 39 n 39 GLN 39 A ASP 40 n 40 ASP 40 A GLY 41 n 41 GLY 41 A PHE 42 n 42 PHE 42 A PRO 43 n 43 PRO 43 A LEU 44 n 44 LEU 44 A VAL 45 n 45 VAL 45 A THR 46 n 46 THR 46 A THR 47 n 47 THR 47 A LYS 48 n 48 LYS 48 A ARG 49 n 49 ARG 49 A CYS 50 n 50 CYS 50 A HIS 51 n 51 HIS 51 A LEU 52 n 52 LEU 52 A ARG 53 n 53 ARG 53 A SER 54 n 54 SER 54 A ILE 55 n 55 ILE 55 A ILE 56 n 56 ILE 56 A HIS 57 n 57 HIS 57 A GLU 58 n 58 GLU 58 A LEU 59 n 59 LEU 59 A LEU 60 n 60 LEU 60 A TRP 61 n 61 TRP 61 A PHE 62 n 62 PHE 62 A LEU 63 n 63 LEU 63 A GLN 64 n 64 GLN 64 A GLY 65 n 65 GLY 65 A ASP 66 n 66 ASP 66 A THR 67 n 67 THR 67 A ASN 68 n 68 ASN 68 A ILE 69 n 69 ILE 69 A ALA 70 n 70 ALA 70 A TYR 71 n 71 TYR 71 A LEU 72 n 72 LEU 72 A HIS 73 n 73 HIS 73 A GLU 74 n 74 GLU 74 A ASN 75 n 75 ASN 75 A ASN 76 n 76 ASN 76 A VAL 77 n 77 VAL 77 A THR 78 n 78 THR 78 A ILE 79 n 79 ILE 79 A TRP 80 n 80 TRP 80 A ASP 81 n 81 ASP 81 A GLU 82 n 82 GLU 82 A TRP 83 n 83 TRP 83 A ALA 84 n 84 ALA 84 A ASP 85 n 85 ASP 85 A GLU 86 n 86 GLU 86 A ASN 87 n 87 ASN 87 A GLY 88 n 88 GLY 88 A ASP 89 n 89 ASP 89 A LEU 90 n 90 LEU 90 A GLY 91 n 91 GLY 91 A PRO 92 n 92 PRO 92 A VAL 93 n 93 VAL 93 A TYR 94 n 94 TYR 94 A GLY 95 n 95 GLY 95 A LYS 96 n 96 LYS 96 A GLN 97 n 97 GLN 97 A TRP 98 n 98 TRP 98 A ARG 99 n 99 ARG 99 A ALA 100 n 100 ALA 100 A TRP 101 n 101 TRP 101 A PRO 102 n 102 PRO 102 A THR 103 n 103 THR 103 A PRO 104 n 104 PRO 104 A ASP 105 n 105 ASP 105 A GLY 106 n 106 GLY 106 A ARG 107 n 107 ARG 107 A HIS 108 n 108 HIS 108 A ILE 109 n 109 ILE 109 A ASP 110 n 110 ASP 110 A GLN 111 n 111 GLN 111 A ILE 112 n 112 ILE 112 A THR 113 n 113 THR 113 A THR 114 n 114 THR 114 A VAL 115 n 115 VAL 115 A LEU 116 n 116 LEU 116 A ASN 117 n 117 ASN 117 A GLN 118 n 118 GLN 118 A LEU 119 n 119 LEU 119 A LYS 120 n 120 LYS 120 A ASN 121 n 121 ASN 121 A ASP 122 n 122 ASP 122 A PRO 123 n 123 PRO 123 A ASP 124 n 124 ASP 124 A SER 125 n 125 SER 125 A ARG 126 n 126 ARG 126 A ARG 127 n 127 ARG 127 A ILE 128 n 128 ILE 128 A ILE 129 n 129 ILE 129 A VAL 130 n 130 VAL 130 A SER 131 n 131 SER 131 A ALA 132 n 132 ALA 132 A TRP 133 n 133 TRP 133 A ASN 134 n 134 ASN 134 A VAL 135 n 135 VAL 135 A GLY 136 n 136 GLY 136 A GLU 137 n 137 GLU 137 A LEU 138 n 138 LEU 138 A ASP 139 n 139 ASP 139 A LYS 140 n 140 LYS 140 A MET 141 n 141 MET 141 A ALA 142 n 142 ALA 142 A LEU 143 n 143 LEU 143 A ALA 144 n 144 ALA 144 A PRO 145 n 145 PRO 145 A CYS 146 n 146 CYS 146 A HIS 147 n 147 HIS 147 A ALA 148 n 148 ALA 148 A PHE 149 n 149 PHE 149 A PHE 150 n 150 PHE 150 A GLN 151 n 151 GLN 151 A PHE 152 n 152 PHE 152 A TYR 153 n 153 TYR 153 A VAL 154 n 154 VAL 154 A ALA 155 n 155 ALA 155 A ASP 156 n 156 ASP 156 A GLY 157 n 157 GLY 157 A LYS 158 n 158 LYS 158 A LEU 159 n 159 LEU 159 A SER 160 n 160 SER 160 A CYS 161 n 161 CYS 161 A GLN 162 n 162 GLN 162 A LEU 163 n 163 LEU 163 A TYR 164 n 164 TYR 164 A GLN 165 n 165 GLN 165 A ARG 166 n 166 ARG 166 A SER 167 n 167 SER 167 A CYS 168 n 168 CYS 168 A ASN 169 n 169 ASN 169 A VAL 170 n 170 VAL 170 A PHE 171 n 171 PHE 171 A LEU 172 n 172 LEU 172 A GLY 173 n 173 GLY 173 A LEU 174 n 174 LEU 174 A PRO 175 n 175 PRO 175 A PHE 176 n 176 PHE 176 A ASN 177 n 177 ASN 177 A ILE 178 n 178 ILE 178 A ALA 179 n 179 ALA 179 A SER 180 n 180 SER 180 A TYR 181 n 181 TYR 181 A ALA 182 n 182 ALA 182 A LEU 183 n 183 LEU 183 A LEU 184 n 184 LEU 184 A VAL 185 n 185 VAL 185 A HIS 186 n 186 HIS 186 A MET 187 n 187 MET 187 A MET 188 n 188 MET 188 A ALA 189 n 189 ALA 189 A GLN 190 n 190 GLN 190 A GLN 191 n 191 GLN 191 A CYS 192 n 192 CYS 192 A ASP 193 n 193 ASP 193 A LEU 194 n 194 LEU 194 A GLU 195 n 195 GLU 195 A VAL 196 n 196 VAL 196 A GLY 197 n 197 GLY 197 A ASP 198 n 198 ASP 198 A PHE 199 n 199 PHE 199 A VAL 200 n 200 VAL 200 A TRP 201 n 201 TRP 201 A THR 202 n 202 THR 202 A GLY 203 n 203 GLY 203 A GLY 204 n 204 GLY 204 A ASP 205 n 205 ASP 205 A THR 206 n 206 THR 206 A HIS 207 n 207 HIS 207 A LEU 208 n 208 LEU 208 A TYR 209 n 209 TYR 209 A SER 210 n 210 SER 210 A ASN 211 n 211 ASN 211 A HIS 212 n 212 HIS 212 A MET 213 n 213 MET 213 A ASP 214 n 214 ASP 214 A GLN 215 n 215 GLN 215 A THR 216 n 216 THR 216 A HIS 217 n 217 HIS 217 A LEU 218 n 218 LEU 218 A GLN 219 n 219 GLN 219 A LEU 220 n 220 LEU 220 A SER 221 n 221 SER 221 A ARG 222 n 222 ARG 222 A GLU 223 n 223 GLU 223 A PRO 224 n 224 PRO 224 A ARG 225 n 225 ARG 225 A PRO 226 n 226 PRO 226 A LEU 227 n 227 LEU 227 A PRO 228 n 228 PRO 228 A LYS 229 n 229 LYS 229 A LEU 230 n 230 LEU 230 A ILE 231 n 231 ILE 231 A ILE 232 n 232 ILE 232 A LYS 233 n 233 LYS 233 A ARG 234 n 234 ARG 234 A LYS 235 n 235 LYS 235 A PRO 236 n 236 PRO 236 A GLU 237 n 237 GLU 237 A SER 238 n 238 SER 238 A ILE 239 n 239 ILE 239 A PHE 240 n 240 PHE 240 A ASP 241 n 241 ASP 241 A TYR 242 n 242 TYR 242 A ARG 243 n 243 ARG 243 A PHE 244 n 244 PHE 244 A GLU 245 n 245 GLU 245 A ASP 246 n 246 ASP 246 A PHE 247 n 247 PHE 247 A GLU 248 n 248 GLU 248 A ILE 249 n 249 ILE 249 A GLU 250 n 250 GLU 250 A GLY 251 n 251 GLY 251 A TYR 252 n 252 TYR 252 A ASP 253 n 253 ASP 253 A PRO 254 n 254 PRO 254 A HIS 255 n 255 HIS 255 A PRO 256 n 256 PRO 256 A GLY 257 n 257 GLY 257 A ILE 258 n 258 ILE 258 A LYS 259 n 259 LYS 259 A ALA 260 n 260 ALA 260 A PRO 261 n 261 PRO 261 A VAL 262 n 262 VAL 262 A ALA 263 n 263 ALA 263 A ILE 264 n 264 ILE 264 A author_and_software_defined_assembly PISA,PQS 2 dimeric 7600 -17 19670 A CXM 1 N-CARBOXYMETHIONINE A CXM 1 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 15_556 -x+1/2,y,-z+1 crystal symmetry operation 66.5000000000 0.0000000000 133.0000000000 A O THR 16 A O THR 16 A N SER 28 A N SER 28 A O LEU 27 A O LEU 27 A N LEU 208 A N LEU 208 A O ASP 205 A O ASP 205 A N CYS 168 A N CYS 168 A O HIS 32 A O HIS 32 A N GLY 203 A N GLY 203 A O VAL 200 A O VAL 200 A N CYS 161 A N CYS 161 A O LYS 158 A O LYS 158 A N ALA 155 A N ALA 155 A O PHE 150 A O PHE 150 A N VAL 130 A N VAL 130 A O LYS 229 A O LYS 229 A N GLU 250 A N GLU 250 1 A HOH 296 D HOH 1 A HOH 337 D HOH 1 A A CA CB CYS CYS 168 168 -0.080 0.013 1.526 1.446 N 1 A THR 22 -78.07 -101.63 1 A PRO 43 -69.29 64.85 1 A TYR 94 -19.36 -75.62 1 A ALA 100 -155.89 59.29 1 A ASP 122 -150.32 63.13 1 A PRO 228 -74.28 -169.92 PARHCSDX.PRO TOPH19CSDX.PRO PARAM11.WAT TOPH11.WAT PARAMED.LIG TOPO.FDUMP PARAM_F.LIG TOPO_CLOSED.THF 26.3 0.2340000 0.006 0.1900000 0.1900000 2.3 7. 1514 15110 10.0 82.1 RANDOM 100000000. 0.001 1 RESTRAINED THROUGHOUT 2.0 MOLECULAR REPLACEMENT WILD TYPE E. COLI TS 0.29 0.23 5.00 0.24 2.3 7. 92 2299 54 0 2153 0.017 1.8 24.0 1.3 3.17 1.50 4.53 2.00 4.37 1.50 6.36 2.00 0.3030000 0.019 0.2420000 2.44 249 1982 6 11.2 75.5 30.3 2.3 1BJG 16757 0.0750000 0.0750000 1 10.4 4.0 94.9 0.2500000 2.3 2.37 3.6 0.2500000 1 2.9 90.1 phasing AMoRE model building X-PLOR refinement X-PLOR 3.1 data reduction DENZO data scaling SCALEPACK phasing X-PLOR D221(169)N MUTANT DOES NOT PROMOTE OPENING OF THE COFACTOR IMIDAZOLIDINE RING 1 N N 2 N N 3 N N 4 N N A LYS 2 A LYS 2 HELX_P A GLU 14 A GLU 14 1 1 13 A LEU 38 A LEU 38 HELX_P A ASP 40 A ASP 40 5 2 3 A LEU 52 A LEU 52 HELX_P A GLN 64 A GLN 64 1 3 13 A ILE 69 A ILE 69 HELX_P A ASN 75 A ASN 75 5 4 7 A ASP 81 A ASP 81 HELX_P A TRP 83 A TRP 83 5 5 3 A TYR 94 A TYR 94 HELX_P A ALA 100 A ALA 100 1 6 7 A GLN 111 A GLN 111 HELX_P A ASN 121 A ASN 121 1 7 11 A VAL 135 A VAL 135 HELX_P A LYS 140 A LYS 140 5 8 6 A GLY 173 A GLY 173 HELX_P A GLN 191 A GLN 191 1 9 19 A SER 210 A SER 210 HELX_P A SER 221 A SER 221 5 10 12 A ILE 239 A ILE 239 HELX_P A ASP 241 A ASP 241 5 11 3 A PHE 244 A PHE 244 HELX_P A ASP 246 A ASP 246 5 12 3 covale 1.326 both A CXM 1 A C CXM 1 1_555 A LYS 2 A N LYS 2 1_555 covale 1.842 none A CYS 146 A SG CYS 146 1_555 A UFP 266 B C6 UFP 1_555 covale 2.164 none B A UFP 266 B F5 UFP 1_555 A TMF 267 C N1 TMF 1_555 covale 1.387 none B A UFP 266 B F5 UFP 1_555 A TMF 267 C C2 TMF 1_555 covale 1.903 none B A UFP 266 B F5 UFP 1_555 A TMF 267 C NA2 TMF 1_555 covale 1.786 none B A UFP 266 B F5 UFP 1_555 A TMF 267 C N3 TMF 1_555 TRANSFERASE TRANSFERASE, ACTIVE SITE MUTANT, REACTION INTERMEDIATE METHYLTRANSFERASE TYSY_ECOLI UNP 1 1 P0A884 MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIW DEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLS CQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF DYRFEDFEIEGYDPHPGIKAPVAI 2 264 1BJG 2 264 P0A884 A 1 2 264 1 ASP engineered mutation ASN 169 1BJG A P0A884 UNP 169 169 4 5 2 anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel A THR 16 A THR 16 A LYS 18 A LYS 18 A THR 26 A THR 26 A PHE 30 A PHE 30 A ASP 205 A ASP 205 A TYR 209 A TYR 209 A SER 167 A SER 167 A ASN 169 A ASN 169 A HIS 32 A HIS 32 A ASN 37 A ASN 37 A ASP 198 A ASP 198 A GLY 203 A GLY 203 A LYS 158 A LYS 158 A GLN 165 A GLN 165 A HIS 147 A HIS 147 A ALA 155 A ALA 155 A ILE 129 A ILE 129 A SER 131 A SER 131 A LYS 229 A LYS 229 A ILE 232 A ILE 232 A PHE 247 A PHE 247 A GLU 250 A GLU 250 BINDING SITE FOR RESIDUE UFP A 266 A UFP 266 Software 15 BINDING SITE FOR RESIDUE TMF A 267 A TMF 267 Software 18 A ARG 21 A ARG 21 15 1_555 A TYR 94 A TYR 94 15 1_555 A ARG 126 A ARG 126 15 15_556 A ARG 127 A ARG 127 15 15_556 A CYS 146 A CYS 146 15 1_555 A HIS 147 A HIS 147 15 1_555 A GLN 165 A GLN 165 15 1_555 A ARG 166 A ARG 166 15 1_555 A SER 167 A SER 167 15 1_555 A CYS 168 A CYS 168 15 1_555 A ASN 169 A ASN 169 15 1_555 A ASN 177 A ASN 177 15 1_555 A HIS 207 A HIS 207 15 1_555 A TMF 267 C TMF 15 1_555 A HOH 301 D HOH 15 1_555 A LYS 48 A LYS 48 18 1_555 A CYS 50 A CYS 50 18 1_555 A HIS 51 A HIS 51 18 1_555 A SER 54 A SER 54 18 1_555 A GLU 58 A GLU 58 18 1_555 A ILE 79 A ILE 79 18 1_555 A TRP 80 A TRP 80 18 1_555 A TRP 83 A TRP 83 18 1_555 A TYR 94 A TYR 94 18 1_555 A LEU 143 A LEU 143 18 1_555 A CYS 146 A CYS 146 18 1_555 A HIS 147 A HIS 147 18 1_555 A ASN 169 A ASN 169 18 1_555 A LEU 172 A LEU 172 18 1_555 A GLY 173 A GLY 173 18 1_555 A PHE 176 A PHE 176 18 1_555 A TYR 209 A TYR 209 18 1_555 A UFP 266 B UFP 18 1_555 199 I 21 3