0.011936
0.006891
0.000000
0.000000
0.013782
0.000000
0.000000
0.000000
0.031260
0.00000
0.00000
0.00000
Rondeau, J.M.
Zurini, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
83.780
83.780
31.990
C2 H4 O
44.053
ACETYL GROUP
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C9 H12 N O6 P
261.168
n
O-PHOSPHOTYROSINE
PHOSPHONOTYROSINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C5 H12 N2 O2 S
164.226
n
L-THIALYSINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
O
N
3
N
C
N
4
N
H
N
5
N
H
N
6
N
H
N
7
N
H
N
8
N
N
N
9
S
C
N
10
N
C
N
11
N
O
N
12
N
C
N
13
N
O
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
N
N
22
S
C
N
23
N
C
N
24
N
O
N
25
N
C
N
26
N
C
N
27
N
C
N
28
N
N
N
29
N
C
N
30
N
N
N
31
N
N
N
32
N
O
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
N
N
49
S
C
N
50
N
C
N
51
N
O
N
52
N
C
N
53
N
C
N
54
N
O
N
55
N
N
N
56
N
O
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
N
N
66
S
C
N
67
N
C
N
68
N
O
N
69
N
C
N
70
N
C
N
71
N
O
N
72
N
O
N
73
N
O
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
N
N
82
S
C
N
83
N
C
N
84
N
O
N
85
N
C
N
86
N
C
N
87
N
C
N
88
N
O
N
89
N
N
N
90
N
O
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
N
N
102
S
C
N
103
N
C
N
104
N
O
N
105
N
C
N
106
N
C
N
107
N
C
N
108
N
O
N
109
N
O
N
110
N
O
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
N
N
121
N
C
N
122
N
C
N
123
N
O
N
124
N
O
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
N
N
131
S
C
N
132
N
C
N
133
N
O
N
134
N
C
Y
135
N
C
Y
136
N
N
Y
137
N
C
Y
138
N
C
Y
139
N
N
N
140
N
O
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
O
N
152
N
H
N
153
N
H
N
154
N
N
N
155
S
C
N
156
N
C
N
157
N
O
N
158
S
C
N
159
N
C
N
160
N
C
N
161
N
C
N
162
N
O
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
N
N
177
S
C
N
178
N
C
N
179
N
O
N
180
N
C
N
181
N
C
N
182
N
C
N
183
N
C
N
184
N
O
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
N
N
199
S
C
N
200
N
C
N
201
N
O
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
C
N
206
N
N
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
N
N
224
S
C
N
225
N
C
N
226
N
O
N
227
N
C
N
228
N
C
N
229
N
S
N
230
N
C
N
231
N
O
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
N
N
244
S
C
N
245
N
C
N
246
N
O
N
247
N
C
Y
248
N
C
Y
249
N
C
Y
250
N
C
Y
251
N
C
Y
252
N
C
Y
253
N
C
N
254
N
O
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
N
N
267
S
C
N
268
N
C
N
269
N
O
N
270
N
C
N
271
N
C
N
272
N
C
N
273
N
O
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
N
O
N
288
N
C
Y
289
N
C
Y
290
N
C
Y
291
N
C
Y
292
N
C
Y
293
N
C
Y
294
N
C
N
295
N
O
N
296
N
P
N
297
N
O
N
298
N
O
N
299
N
O
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
N
N
313
S
C
N
314
N
C
N
315
N
O
N
316
N
C
N
317
N
O
N
318
N
O
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
R
C
N
328
N
C
N
329
N
S
N
330
N
C
N
331
N
C
N
332
N
N
N
333
N
C
N
334
N
O
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
R
C
N
353
N
O
N
354
N
C
N
355
N
O
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
N
N
366
S
C
N
367
N
C
N
368
N
O
N
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
Y
373
N
N
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
N
403
N
O
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
N
N
417
S
C
N
418
N
C
N
419
N
O
N
420
N
C
N
421
N
C
N
422
N
C
N
423
N
O
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
doub
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
doub
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
doub
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
doub
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
doub
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
doub
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
doub
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
Y
133
N
sing
Y
134
N
doub
Y
135
N
doub
N
136
N
sing
Y
137
N
sing
N
138
N
sing
Y
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
doub
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
doub
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
doub
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
doub
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
Y
241
N
doub
Y
242
N
sing
Y
243
N
sing
N
244
N
sing
Y
245
N
doub
N
246
N
sing
Y
247
N
doub
N
248
N
sing
Y
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
doub
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
Y
282
N
doub
Y
283
N
sing
Y
284
N
sing
N
285
N
sing
Y
286
N
doub
N
287
N
sing
Y
288
N
doub
N
289
N
sing
Y
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
doub
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
doub
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
Y
360
N
doub
Y
361
N
sing
Y
362
N
sing
N
363
N
sing
Y
364
N
doub
Y
365
N
sing
Y
366
N
sing
N
367
N
sing
Y
368
N
sing
Y
369
N
doub
N
370
N
sing
Y
371
N
doub
N
372
N
sing
Y
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
doub
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
Y
388
N
doub
Y
389
N
sing
Y
390
N
sing
N
391
N
sing
Y
392
N
doub
N
393
N
sing
Y
394
N
doub
N
395
N
sing
Y
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
doub
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
US
J.Med.Chem.
JMCMAR
0151
0022-2623
42
971
980
10.1021/jm9811007
10090780
Structural and conformational requirements for high-affinity binding to the SH2 domain of Grb2(1).
1999
10.2210/pdb1bm2/pdb
pdb_00001bm2
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293
1
IMAGE PLATE
1997-01-19
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.873
1.0
BM1A
ESRF
0.873
SYNCHROTRON
ESRF BEAMLINE BM1A
13577.362
PROTEIN (GROWTH FACTOR RECEPTOR BOUND PROTEIN 2)
SH2 DOMAIN
1
man
polymer
ACE: N-TERMINAL ACETYL GROUP PTR: L-PHOSPHOTYROSINE
842.896
PROTEIN (PKF273-791)
1
syn
polymer
18.015
water
70
nat
water
GRB2
CYCLO-[N-ALPHA-ACETYL-L-THIALYSYL-O-PHOSPHOTYROSYL -VALYL-ASPARAGYL-VALYL- PROLYL]
no
no
GSPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFN
SLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQA
GSPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFN
SLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQA
A
polypeptide(L)
no
yes
(ACE)(SLZ)(PTR)VNVP
XKYVNVP
L
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
CYTOPLASM
GRB2
9606
Homo sapiens
CYTOPLASM
562
Escherichia coli
BL21 (DE3)
PLYSS
1
2.4
49
7.0
PROTEIN (15MG/ML IN 100MM SODIUM CHLORIDE, 0.02% SODIUM AZIDE) WAS CRYSTALLIZED FROM 30% SATURATED AMMONIUM SULFATE, 100MM SODIUM HEPES PH 7.0, IN PRESENCE OF A 2-FOLD EXCESS OF LIGAND
database_2
struct_conn
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Data collection
Refinement description
Data collection
1
0
1998-08-05
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-12-21
1
4
2023-09-20
1
5
2023-11-15
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_chem_comp_atom.atom_id
_chem_comp_bond.atom_id_2
BNL
Y
RCSB
1998-07-27
REL
REL
HOH
water
1BMB
PDB ENTRY 1BMB
PDB
experimental model
HOH
1
3
HOH
HOH
164
A
HOH
2
3
HOH
HOH
165
A
HOH
3
3
HOH
HOH
166
A
HOH
4
3
HOH
HOH
167
A
HOH
5
3
HOH
HOH
168
A
HOH
7
3
HOH
HOH
169
A
HOH
8
3
HOH
HOH
170
A
HOH
9
3
HOH
HOH
171
A
HOH
10
3
HOH
HOH
172
A
HOH
11
3
HOH
HOH
173
A
HOH
12
3
HOH
HOH
174
A
HOH
13
3
HOH
HOH
175
A
HOH
14
3
HOH
HOH
176
A
HOH
15
3
HOH
HOH
177
A
HOH
16
3
HOH
HOH
178
A
HOH
17
3
HOH
HOH
179
A
HOH
18
3
HOH
HOH
180
A
HOH
19
3
HOH
HOH
181
A
HOH
20
3
HOH
HOH
182
A
HOH
21
3
HOH
HOH
183
A
HOH
23
3
HOH
HOH
184
A
HOH
24
3
HOH
HOH
185
A
HOH
25
3
HOH
HOH
186
A
HOH
26
3
HOH
HOH
187
A
HOH
27
3
HOH
HOH
188
A
HOH
28
3
HOH
HOH
189
A
HOH
30
3
HOH
HOH
190
A
HOH
31
3
HOH
HOH
191
A
HOH
32
3
HOH
HOH
192
A
HOH
33
3
HOH
HOH
193
A
HOH
34
3
HOH
HOH
194
A
HOH
35
3
HOH
HOH
195
A
HOH
36
3
HOH
HOH
196
A
HOH
37
3
HOH
HOH
197
A
HOH
38
3
HOH
HOH
198
A
HOH
39
3
HOH
HOH
199
A
HOH
40
3
HOH
HOH
200
A
HOH
41
3
HOH
HOH
201
A
HOH
42
3
HOH
HOH
202
A
HOH
43
3
HOH
HOH
203
A
HOH
44
3
HOH
HOH
204
A
HOH
45
3
HOH
HOH
205
A
HOH
46
3
HOH
HOH
206
A
HOH
47
3
HOH
HOH
207
A
HOH
49
3
HOH
HOH
208
A
HOH
50
3
HOH
HOH
209
A
HOH
51
3
HOH
HOH
210
A
HOH
52
3
HOH
HOH
211
A
HOH
53
3
HOH
HOH
212
A
HOH
54
3
HOH
HOH
213
A
HOH
55
3
HOH
HOH
214
A
HOH
56
3
HOH
HOH
215
A
HOH
57
3
HOH
HOH
216
A
HOH
58
3
HOH
HOH
217
A
HOH
59
3
HOH
HOH
218
A
HOH
60
3
HOH
HOH
219
A
HOH
61
3
HOH
HOH
220
A
HOH
62
3
HOH
HOH
221
A
HOH
63
3
HOH
HOH
222
A
HOH
64
3
HOH
HOH
223
A
HOH
65
3
HOH
HOH
224
A
HOH
66
3
HOH
HOH
225
A
HOH
67
3
HOH
HOH
226
A
HOH
69
3
HOH
HOH
227
A
HOH
70
3
HOH
HOH
228
A
HOH
6
3
HOH
HOH
8
L
HOH
22
3
HOH
HOH
9
L
HOH
29
3
HOH
HOH
10
L
HOH
48
3
HOH
HOH
11
L
HOH
68
3
HOH
HOH
12
L
n
1
47
A
n
2
48
A
n
3
49
A
n
4
50
A
n
5
51
A
n
6
52
A
n
7
53
A
n
8
54
A
MET
55
n
9
MET
55
A
LYS
56
n
10
LYS
56
A
PRO
57
n
11
PRO
57
A
HIS
58
n
12
HIS
58
A
PRO
59
n
13
PRO
59
A
TRP
60
n
14
TRP
60
A
PHE
61
n
15
PHE
61
A
PHE
62
n
16
PHE
62
A
GLY
63
n
17
GLY
63
A
LYS
64
n
18
LYS
64
A
ILE
65
n
19
ILE
65
A
PRO
66
n
20
PRO
66
A
ARG
67
n
21
ARG
67
A
ALA
68
n
22
ALA
68
A
LYS
69
n
23
LYS
69
A
ALA
70
n
24
ALA
70
A
GLU
71
n
25
GLU
71
A
GLU
72
n
26
GLU
72
A
MET
73
n
27
MET
73
A
LEU
74
n
28
LEU
74
A
SER
75
n
29
SER
75
A
LYS
76
n
30
LYS
76
A
GLN
77
n
31
GLN
77
A
ARG
78
n
32
ARG
78
A
HIS
79
n
33
HIS
79
A
ASP
80
n
34
ASP
80
A
GLY
81
n
35
GLY
81
A
ALA
82
n
36
ALA
82
A
PHE
83
n
37
PHE
83
A
LEU
84
n
38
LEU
84
A
ILE
85
n
39
ILE
85
A
ARG
86
n
40
ARG
86
A
GLU
87
n
41
GLU
87
A
SER
88
n
42
SER
88
A
GLU
89
n
43
GLU
89
A
SER
90
n
44
SER
90
A
ALA
91
n
45
ALA
91
A
PRO
92
n
46
PRO
92
A
GLY
93
n
47
GLY
93
A
ASP
94
n
48
ASP
94
A
PHE
95
n
49
PHE
95
A
SER
96
n
50
SER
96
A
LEU
97
n
51
LEU
97
A
SER
98
n
52
SER
98
A
VAL
99
n
53
VAL
99
A
LYS
100
n
54
LYS
100
A
PHE
101
n
55
PHE
101
A
GLY
102
n
56
GLY
102
A
ASN
103
n
57
ASN
103
A
ASP
104
n
58
ASP
104
A
VAL
105
n
59
VAL
105
A
GLN
106
n
60
GLN
106
A
HIS
107
n
61
HIS
107
A
PHE
108
n
62
PHE
108
A
LYS
109
n
63
LYS
109
A
VAL
110
n
64
VAL
110
A
LEU
111
n
65
LEU
111
A
ARG
112
n
66
ARG
112
A
ASP
113
n
67
ASP
113
A
GLY
114
n
68
GLY
114
A
ALA
115
n
69
ALA
115
A
GLY
116
n
70
GLY
116
A
LYS
117
n
71
LYS
117
A
TYR
118
n
72
TYR
118
A
PHE
119
n
73
PHE
119
A
LEU
120
n
74
LEU
120
A
TRP
121
n
75
TRP
121
A
VAL
122
n
76
VAL
122
A
VAL
123
n
77
VAL
123
A
LYS
124
n
78
LYS
124
A
PHE
125
n
79
PHE
125
A
ASN
126
n
80
ASN
126
A
SER
127
n
81
SER
127
A
LEU
128
n
82
LEU
128
A
ASN
129
n
83
ASN
129
A
GLU
130
n
84
GLU
130
A
LEU
131
n
85
LEU
131
A
VAL
132
n
86
VAL
132
A
ASP
133
n
87
ASP
133
A
TYR
134
n
88
TYR
134
A
HIS
135
n
89
HIS
135
A
ARG
136
n
90
ARG
136
A
SER
137
n
91
SER
137
A
THR
138
n
92
THR
138
A
SER
139
n
93
SER
139
A
VAL
140
n
94
VAL
140
A
SER
141
n
95
SER
141
A
ARG
142
n
96
ARG
142
A
ASN
143
n
97
ASN
143
A
GLN
144
n
98
GLN
144
A
GLN
145
n
99
GLN
145
A
ILE
146
n
100
ILE
146
A
PHE
147
n
101
PHE
147
A
LEU
148
n
102
LEU
148
A
ARG
149
n
103
ARG
149
A
ASP
150
n
104
ASP
150
A
ILE
151
n
105
ILE
151
A
GLU
152
n
106
GLU
152
A
n
107
153
A
n
108
154
A
n
109
155
A
n
110
156
A
n
111
157
A
n
112
158
A
n
113
159
A
n
114
160
A
n
115
161
A
n
116
162
A
n
117
163
A
ACE
1
n
1
ACE
1
L
SLZ
2
n
2
SLZ
2
L
PTR
3
n
3
PTR
3
L
VAL
4
n
4
VAL
4
L
ASN
5
n
5
ASN
5
L
VAL
6
n
6
VAL
6
L
PRO
7
n
7
PRO
7
L
author_and_software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
4
tetrameric
1040
-11
6000
3930
-32
10150
L
SLZ
2
L-THIALYSINE
B
SLZ
2
LYS
L
PTR
3
O-PHOSPHOTYROSINE
B
PTR
3
TYR
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_556
y,x,-z+1
crystal symmetry operation
0.0000000000
0.0000000000
31.9900000000
A
O
LEU
84
A
O
LEU
38
A
N
SER
98
A
N
SER
52
A
O
PHE
95
A
O
PHE
49
A
N
VAL
110
A
N
VAL
64
1
A
HOH
179
C
HOH
1
A
HOH
199
C
HOH
1
A
CG
MET
55
A
CG
MET
9
1
Y
1
A
SD
MET
55
A
SD
MET
9
1
Y
1
A
CE
MET
55
A
CE
MET
9
1
Y
1
A
GLY
47
A
GLY
1
1
Y
1
A
SER
48
A
SER
2
1
Y
1
A
PRO
49
A
PRO
3
1
Y
1
A
LYS
50
A
LYS
4
1
Y
1
A
ASN
51
A
ASN
5
1
Y
1
A
TYR
52
A
TYR
6
1
Y
1
A
ILE
53
A
ILE
7
1
Y
1
A
GLU
54
A
GLU
8
1
Y
1
A
GLN
153
A
GLN
107
1
Y
1
A
VAL
154
A
VAL
108
1
Y
1
A
PRO
155
A
PRO
109
1
Y
1
A
GLN
156
A
GLN
110
1
Y
1
A
GLN
157
A
GLN
111
1
Y
1
A
PRO
158
A
PRO
112
1
Y
1
A
THR
159
A
THR
113
1
Y
1
A
TYR
160
A
TYR
114
1
Y
1
A
VAL
161
A
VAL
115
1
Y
1
A
GLN
162
A
GLN
116
1
Y
1
A
ALA
163
A
ALA
117
1
Y
1
A
TRP
121
-124.89
-100.21
PARHCSDX.PRO
TOPHCSDX.PRO
WATER.PAR
WATER.TOP
PO4.PAR
27.3
0.00
0.00
0.00
0.00
0.00
0.00
0.2320000
0.009
0.1970000
0.1970000
2.10
8.00
738
7184
10.3
94.5
RANDOM
1000000.00
0.10000
1
RESTRAINED
THROUGHOUT
2.0
MOLECULAR REPLACEMENT
PDB ENTRY 1BMB
0.28
0.24
5.00
0.34
0.27
2.10
8.00
70
945
0
0
875
0.007
1.3
25.9
1.21
2.71
1.50
4.24
2.00
4.72
2.00
7.36
2.50
0.3580000
0.034
0.2810000
2.23
112
1078
6
9.4
96.2
15.2
2.10
8.0
1BM2
7262
0
0.0440000
1
15.3
4.6
95.6
0.1990000
2.10
2.17
4.1
4.5
96.1
phasing
AMoRE
refinement
X-PLOR
3.1
data reduction
DENZO
data scaling
SCALEPACK
GRB2-SH2 DOMAIN IN COMPLEX WITH CYCLO-[N-ALPHA-ACETYL-L-THI ALYSYL-O-PHOSPHOTYROSYL-VALYL-ASPARAGYL-VALYL-PROLYL] (PKF273-791)
1
N
N
2
N
N
3
N
N
3
N
N
A
ARG
67
A
ARG
21
HELX_P
A
LYS
76
A
LYS
30
1
1
10
A
LEU
128
A
LEU
82
HELX_P
A
SER
137
A
SER
91
1
2
10
covale
1.332
both
L
ACE
1
B
C
ACE
1
1_555
L
SLZ
2
B
N
SLZ
2
1_555
covale
1.325
both
L
SLZ
2
B
C
SLZ
2
1_555
L
PTR
3
B
N
PTR
3
1_555
covale
1.329
one
L
SLZ
2
B
NZ
SLZ
2
1_555
L
PRO
7
B
C
PRO
7
1_555
covale
1.326
both
L
PTR
3
B
C
PTR
3
1_555
L
VAL
4
B
N
VAL
4
1_555
HORMONE/GROWTH FACTOR
SH2 DOMAIN, SIGNAL TRANSDUCTION, ADAPTOR PROTEIN, RAS PATHWAY, CYCLIC PEPTIDE, HORMONE-GROWTH FACTOR COMPLEX
GRB2_HUMAN
UNP
1
1BM2
PDB
2
47
163
1BM2
47
163
P29354
A
1
1
117
1
7
1BM2
1
7
1BM2
L
2
1
7
1
PHE
cloning artifact
GLY
47
1BM2
A
P29354
UNP
47
1
1
ILE
cloning artifact
SER
48
1BM2
A
P29354
UNP
48
2
3
anti-parallel
anti-parallel
A
PHE
83
A
PHE
37
A
GLU
87
A
GLU
41
A
PHE
95
A
PHE
49
A
PHE
101
A
PHE
55
A
ASP
104
A
ASP
58
A
VAL
110
A
VAL
64
BINDING SITE FOR RESIDUE ACE L 1
L
ACE
1
Software
1
L
HOH
10
D
HOH
1
4_556
150
P 3 2 1