0.013984
0.000000
0.000000
0.000000
0.011417
0.000000
0.000000
0.000000
0.008405
0.00000
0.00000
0.00000
SIDE CHAINS HAVE BEEN MODELED IN TWO ALTERNATE CONFORMATIONS AND ASSIGNED ALTERNATE LOCATION INDICATORS *1* AND *2*.
RESIDUES PRO A 131 AND PRO B 131 ARE CIS PROLINES.
Kelly, C.A.
Birktoft, J.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
71.510
87.590
118.980
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C21 H27 N7 O14 P2
663.425
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
S
P
N
251
N
O
N
252
N
O
N
253
N
O
N
254
N
C
N
255
R
C
N
256
N
O
N
257
S
C
N
258
N
O
N
259
R
C
N
260
N
O
N
261
R
C
Y
262
N
N
Y
263
N
C
Y
264
N
N
Y
265
N
C
Y
266
N
C
N
267
N
N
Y
268
N
N
Y
269
N
C
Y
270
N
N
Y
271
N
C
N
272
N
O
N
273
N
P
N
274
N
O
N
275
N
O
N
276
N
O
N
277
N
C
N
278
R
C
N
279
N
O
N
280
S
C
N
281
N
O
N
282
R
C
N
283
N
O
N
284
R
C
Y
285
N
N
Y
286
N
C
Y
287
N
C
N
288
N
C
N
289
N
O
N
290
N
N
Y
291
N
C
Y
292
N
C
Y
293
N
C
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
N
N
345
S
C
N
346
N
C
N
347
N
O
N
348
N
C
N
349
N
C
N
350
N
C
N
351
N
O
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
N
N
362
S
C
N
363
N
C
N
364
N
O
N
365
N
C
N
366
N
O
N
367
N
O
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
N
N
376
S
C
N
377
N
C
N
378
N
O
N
379
R
C
N
380
N
O
N
381
N
C
N
382
N
O
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
N
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
N
406
N
O
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
N
N
420
S
C
N
421
N
C
N
422
N
O
N
423
N
C
Y
424
N
C
Y
425
N
C
Y
426
N
C
Y
427
N
C
Y
428
N
C
Y
429
N
C
N
430
N
O
N
431
N
O
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
N
N
444
S
C
N
445
N
C
N
446
N
O
N
447
N
C
N
448
N
C
N
449
N
C
N
450
N
O
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
Y
260
N
sing
Y
261
N
sing
Y
262
N
doub
N
263
N
sing
Y
264
N
sing
Y
265
N
sing
Y
266
N
doub
N
267
N
sing
Y
268
N
doub
N
269
N
sing
N
270
N
sing
Y
271
N
sing
Y
272
N
doub
N
273
N
sing
Y
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
Y
297
N
sing
Y
298
N
doub
Y
299
N
doub
N
300
N
sing
N
301
N
sing
Y
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
Y
307
N
doub
N
308
N
sing
Y
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
doub
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
Y
323
N
doub
Y
324
N
sing
Y
325
N
sing
N
326
N
sing
Y
327
N
doub
N
328
N
sing
Y
329
N
doub
N
330
N
sing
Y
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
doub
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
doub
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
Y
392
N
doub
Y
393
N
sing
Y
394
N
sing
N
395
N
sing
Y
396
N
doub
Y
397
N
sing
Y
398
N
sing
N
399
N
sing
Y
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
doub
N
404
N
sing
Y
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
doub
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
Y
420
N
doub
Y
421
N
sing
Y
422
N
sing
N
423
N
sing
Y
424
N
doub
N
425
N
sing
Y
426
N
doub
N
427
N
sing
Y
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
doub
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
32
3913
3922
10.1021/bi00066a010
8471603
Determinants of protein thermostability observed in the 1.9-A crystal structure of malate dehydrogenase from the thermophilic bacterium Thermus flavus.
1993
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
221
383
Preliminary X-Ray Diffraction Analysis of a Crystallizable Mutant of Malate Dehydrogenase from the Thermophile Thermus Flavus
1991
US
Biochemistry
BICHAW
0033
0006-2960
28
6065
Refined Crystal Structure of Cytoplasmic Malate Dehydrogenase at 2.5 Angstroms Resolution
1989
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
261
14178
Nucleotide Sequence of the Malate Dehydrogenase Gene of Thermus Flavus and its Mutation Directing an Increase in Enzyme Activity
1986
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
258
472
The Presence of a Histidine-Aspartic Acid Pair in the Active Site of 2-Hydroxyacid Dehydrogenases
1983
SW
Enzyme
ENZYBT
0818
0013-9432
11
369
Malate Dehydrogenases
1975
10.2210/pdb1bmd/pdb
pdb_00001bmd
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
35452.691
MALATE DEHYDROGENASE
1.1.1.37
2
man
polymer
663.425
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
2
syn
non-polymer
18.015
water
288
nat
water
no
no
MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPDVAFKD
ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDH
NRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQARGASSAAS
AANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDEMEQ
VKALGLI
MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPDVAFKD
ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDH
NRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQARGASSAAS
AANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDEMEQ
VKALGLI
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Thermus
sample
274
Thermus thermophilus
BACTERIUM
2.63
53.17
pdbx_database_status
struct_conf
struct_conf_type
software
software
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Other
Data collection
Refinement description
Data collection
Refinement description
Data collection
Database references
Derived calculations
1
0
1994-07-31
1
1
2008-03-24
1
2
2011-07-13
1
3
2017-11-29
1
4
2019-07-17
1
5
2019-08-14
1
6
2024-02-07
_pdbx_database_status.process_site
_software.classification
_software.classification
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1992-11-10
REL
NAD
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
HOH
water
THE NUMBERING SYSTEM IS THE SAME AS THAT USED FOR THE
CYTOPLASMIC MALATE DEHYDROGENASE STRUCTURE. THE DELETION
REGIONS IN TMDH, 201 - 204, 213, AND 276, LEAD TO
DISCONTINUITIES IN THE TMDH NUMBERING. HOWEVER, THERE ARE
NO BREAKS IN THE PEPTIDE CHAIN.
SEQUENCE ADVISORY NOTICE:
DIFFERENCE BETWEEN SWISS-PROT AND PDB SEQUENCE.
SWISS-PROT ENTRY NAME: MDH_THEFL
SWISS-PROT RESIDUE PDB SEQRES
NAME NUMBER NAME CHAIN SEQ/INSERT CODE
LYS 75 ASP A 74
LYS 75 ASP B 74
NAD
334
2
NAD
NAD
334
A
NAD
334
2
NAD
NAD
334
B
HOH
2
3
HOH
HOH
335
A
HOH
5
3
HOH
HOH
336
A
HOH
7
3
HOH
HOH
337
A
HOH
9
3
HOH
HOH
338
A
HOH
11
3
HOH
HOH
339
A
HOH
14
3
HOH
HOH
340
A
HOH
15
3
HOH
HOH
341
A
HOH
20
3
HOH
HOH
342
A
HOH
25
3
HOH
HOH
343
A
HOH
26
3
HOH
HOH
344
A
HOH
28
3
HOH
HOH
345
A
HOH
29
3
HOH
HOH
346
A
HOH
31
3
HOH
HOH
347
A
HOH
34
3
HOH
HOH
348
A
HOH
36
3
HOH
HOH
349
A
HOH
40
3
HOH
HOH
350
A
HOH
41
3
HOH
HOH
351
A
HOH
43
3
HOH
HOH
352
A
HOH
44
3
HOH
HOH
353
A
HOH
46
3
HOH
HOH
354
A
HOH
48
3
HOH
HOH
355
A
HOH
49
3
HOH
HOH
356
A
HOH
53
3
HOH
HOH
357
A
HOH
54
3
HOH
HOH
358
A
HOH
55
3
HOH
HOH
359
A
HOH
56
3
HOH
HOH
360
A
HOH
58
3
HOH
HOH
361
A
HOH
60
3
HOH
HOH
362
A
HOH
61
3
HOH
HOH
363
A
HOH
62
3
HOH
HOH
364
A
HOH
63
3
HOH
HOH
365
A
HOH
67
3
HOH
HOH
366
A
HOH
68
3
HOH
HOH
367
A
HOH
74
3
HOH
HOH
368
A
HOH
75
3
HOH
HOH
369
A
HOH
78
3
HOH
HOH
370
A
HOH
79
3
HOH
HOH
371
A
HOH
80
3
HOH
HOH
372
A
HOH
82
3
HOH
HOH
373
A
HOH
83
3
HOH
HOH
374
A
HOH
84
3
HOH
HOH
375
A
HOH
88
3
HOH
HOH
376
A
HOH
91
3
HOH
HOH
377
A
HOH
96
3
HOH
HOH
378
A
HOH
98
3
HOH
HOH
379
A
HOH
99
3
HOH
HOH
380
A
HOH
100
3
HOH
HOH
381
A
HOH
101
3
HOH
HOH
382
A
HOH
102
3
HOH
HOH
383
A
HOH
103
3
HOH
HOH
384
A
HOH
105
3
HOH
HOH
385
A
HOH
108
3
HOH
HOH
386
A
HOH
110
3
HOH
HOH
387
A
HOH
112
3
HOH
HOH
388
A
HOH
118
3
HOH
HOH
389
A
HOH
120
3
HOH
HOH
390
A
HOH
124
3
HOH
HOH
391
A
HOH
125
3
HOH
HOH
392
A
HOH
129
3
HOH
HOH
393
A
HOH
131
3
HOH
HOH
394
A
HOH
133
3
HOH
HOH
395
A
HOH
135
3
HOH
HOH
396
A
HOH
137
3
HOH
HOH
397
A
HOH
141
3
HOH
HOH
398
A
HOH
142
3
HOH
HOH
399
A
HOH
145
3
HOH
HOH
400
A
HOH
146
3
HOH
HOH
401
A
HOH
147
3
HOH
HOH
402
A
HOH
149
3
HOH
HOH
403
A
HOH
152
3
HOH
HOH
404
A
HOH
155
3
HOH
HOH
405
A
HOH
156
3
HOH
HOH
406
A
HOH
161
3
HOH
HOH
407
A
HOH
164
3
HOH
HOH
408
A
HOH
166
3
HOH
HOH
409
A
HOH
167
3
HOH
HOH
410
A
HOH
169
3
HOH
HOH
411
A
HOH
170
3
HOH
HOH
412
A
HOH
175
3
HOH
HOH
413
A
HOH
178
3
HOH
HOH
414
A
HOH
180
3
HOH
HOH
415
A
HOH
182
3
HOH
HOH
416
A
HOH
183
3
HOH
HOH
417
A
HOH
188
3
HOH
HOH
418
A
HOH
189
3
HOH
HOH
419
A
HOH
191
3
HOH
HOH
420
A
HOH
195
3
HOH
HOH
421
A
HOH
201
3
HOH
HOH
422
A
HOH
203
3
HOH
HOH
423
A
HOH
204
3
HOH
HOH
424
A
HOH
206
3
HOH
HOH
425
A
HOH
210
3
HOH
HOH
426
A
HOH
211
3
HOH
HOH
427
A
HOH
212
3
HOH
HOH
428
A
HOH
217
3
HOH
HOH
429
A
HOH
220
3
HOH
HOH
430
A
HOH
221
3
HOH
HOH
431
A
HOH
223
3
HOH
HOH
432
A
HOH
224
3
HOH
HOH
433
A
HOH
225
3
HOH
HOH
434
A
HOH
227
3
HOH
HOH
435
A
HOH
230
3
HOH
HOH
436
A
HOH
231
3
HOH
HOH
437
A
HOH
232
3
HOH
HOH
438
A
HOH
234
3
HOH
HOH
439
A
HOH
235
3
HOH
HOH
440
A
HOH
238
3
HOH
HOH
441
A
HOH
244
3
HOH
HOH
442
A
HOH
246
3
HOH
HOH
443
A
HOH
247
3
HOH
HOH
444
A
HOH
251
3
HOH
HOH
445
A
HOH
252
3
HOH
HOH
446
A
HOH
254
3
HOH
HOH
447
A
HOH
261
3
HOH
HOH
448
A
HOH
264
3
HOH
HOH
449
A
HOH
265
3
HOH
HOH
450
A
HOH
267
3
HOH
HOH
451
A
HOH
269
3
HOH
HOH
452
A
HOH
270
3
HOH
HOH
453
A
HOH
277
3
HOH
HOH
454
A
HOH
280
3
HOH
HOH
455
A
HOH
281
3
HOH
HOH
456
A
HOH
283
3
HOH
HOH
457
A
HOH
287
3
HOH
HOH
458
A
HOH
288
3
HOH
HOH
459
A
HOH
1
3
HOH
HOH
335
B
HOH
3
3
HOH
HOH
336
B
HOH
4
3
HOH
HOH
337
B
HOH
6
3
HOH
HOH
338
B
HOH
8
3
HOH
HOH
339
B
HOH
10
3
HOH
HOH
340
B
HOH
12
3
HOH
HOH
341
B
HOH
13
3
HOH
HOH
342
B
HOH
16
3
HOH
HOH
343
B
HOH
17
3
HOH
HOH
344
B
HOH
18
3
HOH
HOH
345
B
HOH
19
3
HOH
HOH
346
B
HOH
21
3
HOH
HOH
347
B
HOH
22
3
HOH
HOH
348
B
HOH
23
3
HOH
HOH
349
B
HOH
24
3
HOH
HOH
350
B
HOH
27
3
HOH
HOH
351
B
HOH
30
3
HOH
HOH
352
B
HOH
32
3
HOH
HOH
353
B
HOH
33
3
HOH
HOH
354
B
HOH
35
3
HOH
HOH
355
B
HOH
37
3
HOH
HOH
356
B
HOH
38
3
HOH
HOH
357
B
HOH
39
3
HOH
HOH
358
B
HOH
42
3
HOH
HOH
359
B
HOH
45
3
HOH
HOH
360
B
HOH
47
3
HOH
HOH
361
B
HOH
50
3
HOH
HOH
362
B
HOH
51
3
HOH
HOH
363
B
HOH
52
3
HOH
HOH
364
B
HOH
57
3
HOH
HOH
365
B
HOH
59
3
HOH
HOH
366
B
HOH
64
3
HOH
HOH
367
B
HOH
65
3
HOH
HOH
368
B
HOH
66
3
HOH
HOH
369
B
HOH
69
3
HOH
HOH
370
B
HOH
70
3
HOH
HOH
371
B
HOH
71
3
HOH
HOH
372
B
HOH
72
3
HOH
HOH
373
B
HOH
73
3
HOH
HOH
374
B
HOH
76
3
HOH
HOH
375
B
HOH
77
3
HOH
HOH
376
B
HOH
81
3
HOH
HOH
377
B
HOH
85
3
HOH
HOH
378
B
HOH
86
3
HOH
HOH
379
B
HOH
87
3
HOH
HOH
380
B
HOH
89
3
HOH
HOH
381
B
HOH
90
3
HOH
HOH
382
B
HOH
92
3
HOH
HOH
383
B
HOH
93
3
HOH
HOH
384
B
HOH
94
3
HOH
HOH
385
B
HOH
95
3
HOH
HOH
386
B
HOH
97
3
HOH
HOH
387
B
HOH
104
3
HOH
HOH
388
B
HOH
106
3
HOH
HOH
389
B
HOH
107
3
HOH
HOH
390
B
HOH
109
3
HOH
HOH
391
B
HOH
111
3
HOH
HOH
392
B
HOH
113
3
HOH
HOH
393
B
HOH
114
3
HOH
HOH
394
B
HOH
115
3
HOH
HOH
395
B
HOH
116
3
HOH
HOH
396
B
HOH
117
3
HOH
HOH
397
B
HOH
119
3
HOH
HOH
398
B
HOH
121
3
HOH
HOH
399
B
HOH
122
3
HOH
HOH
400
B
HOH
123
3
HOH
HOH
401
B
HOH
126
3
HOH
HOH
402
B
HOH
127
3
HOH
HOH
403
B
HOH
128
3
HOH
HOH
404
B
HOH
130
3
HOH
HOH
405
B
HOH
132
3
HOH
HOH
406
B
HOH
134
3
HOH
HOH
407
B
HOH
136
3
HOH
HOH
408
B
HOH
138
3
HOH
HOH
409
B
HOH
139
3
HOH
HOH
410
B
HOH
140
3
HOH
HOH
411
B
HOH
143
3
HOH
HOH
412
B
HOH
144
3
HOH
HOH
413
B
HOH
148
3
HOH
HOH
414
B
HOH
150
3
HOH
HOH
415
B
HOH
151
3
HOH
HOH
416
B
HOH
153
3
HOH
HOH
417
B
HOH
154
3
HOH
HOH
418
B
HOH
157
3
HOH
HOH
419
B
HOH
158
3
HOH
HOH
420
B
HOH
159
3
HOH
HOH
421
B
HOH
160
3
HOH
HOH
422
B
HOH
162
3
HOH
HOH
423
B
HOH
163
3
HOH
HOH
424
B
HOH
165
3
HOH
HOH
425
B
HOH
168
3
HOH
HOH
426
B
HOH
171
3
HOH
HOH
427
B
HOH
172
3
HOH
HOH
428
B
HOH
173
3
HOH
HOH
429
B
HOH
174
3
HOH
HOH
430
B
HOH
176
3
HOH
HOH
431
B
HOH
177
3
HOH
HOH
432
B
HOH
179
3
HOH
HOH
433
B
HOH
181
3
HOH
HOH
434
B
HOH
184
3
HOH
HOH
435
B
HOH
185
3
HOH
HOH
436
B
HOH
186
3
HOH
HOH
437
B
HOH
187
3
HOH
HOH
438
B
HOH
190
3
HOH
HOH
439
B
HOH
192
3
HOH
HOH
440
B
HOH
193
3
HOH
HOH
441
B
HOH
194
3
HOH
HOH
442
B
HOH
196
3
HOH
HOH
443
B
HOH
197
3
HOH
HOH
444
B
HOH
198
3
HOH
HOH
445
B
HOH
199
3
HOH
HOH
446
B
HOH
200
3
HOH
HOH
447
B
HOH
202
3
HOH
HOH
448
B
HOH
205
3
HOH
HOH
449
B
HOH
207
3
HOH
HOH
450
B
HOH
208
3
HOH
HOH
451
B
HOH
209
3
HOH
HOH
452
B
HOH
213
3
HOH
HOH
453
B
HOH
214
3
HOH
HOH
454
B
HOH
215
3
HOH
HOH
455
B
HOH
216
3
HOH
HOH
456
B
HOH
218
3
HOH
HOH
457
B
HOH
219
3
HOH
HOH
458
B
HOH
222
3
HOH
HOH
459
B
HOH
226
3
HOH
HOH
460
B
HOH
228
3
HOH
HOH
461
B
HOH
229
3
HOH
HOH
462
B
HOH
233
3
HOH
HOH
463
B
HOH
236
3
HOH
HOH
464
B
HOH
237
3
HOH
HOH
465
B
HOH
239
3
HOH
HOH
466
B
HOH
240
3
HOH
HOH
467
B
HOH
241
3
HOH
HOH
468
B
HOH
242
3
HOH
HOH
469
B
HOH
243
3
HOH
HOH
470
B
HOH
245
3
HOH
HOH
471
B
HOH
248
3
HOH
HOH
472
B
HOH
249
3
HOH
HOH
473
B
HOH
250
3
HOH
HOH
474
B
HOH
253
3
HOH
HOH
475
B
HOH
255
3
HOH
HOH
476
B
HOH
256
3
HOH
HOH
477
B
HOH
257
3
HOH
HOH
478
B
HOH
258
3
HOH
HOH
479
B
HOH
259
3
HOH
HOH
480
B
HOH
260
3
HOH
HOH
481
B
HOH
262
3
HOH
HOH
482
B
HOH
263
3
HOH
HOH
483
B
HOH
266
3
HOH
HOH
484
B
HOH
268
3
HOH
HOH
485
B
HOH
271
3
HOH
HOH
486
B
HOH
272
3
HOH
HOH
487
B
HOH
273
3
HOH
HOH
488
B
HOH
274
3
HOH
HOH
489
B
HOH
275
3
HOH
HOH
490
B
HOH
276
3
HOH
HOH
491
B
HOH
278
3
HOH
HOH
492
B
HOH
279
3
HOH
HOH
493
B
HOH
282
3
HOH
HOH
494
B
HOH
284
3
HOH
HOH
495
B
HOH
285
3
HOH
HOH
496
B
HOH
286
3
HOH
HOH
497
B
MET
0
n
1
MET
0
A
LYS
1
n
2
LYS
1
A
ALA
2
n
3
ALA
2
A
PRO
3
n
4
PRO
3
A
VAL
4
n
5
VAL
4
A
ARG
5
n
6
ARG
5
A
VAL
6
n
7
VAL
6
A
ALA
7
n
8
ALA
7
A
VAL
8
n
9
VAL
8
A
THR
9
n
10
THR
9
A
GLY
10
n
11
GLY
10
A
ALA
11
n
12
ALA
11
A
ALA
12
n
13
ALA
12
A
GLY
13
n
14
GLY
13
A
GLN
14
n
15
GLN
14
A
ILE
15
n
16
ILE
15
A
GLY
16
n
17
GLY
16
A
TYR
17
n
18
TYR
17
A
SER
18
n
19
SER
18
A
LEU
19
n
20
LEU
19
A
LEU
20
n
21
LEU
20
A
PHE
21
n
22
PHE
21
A
ARG
22
n
23
ARG
22
A
ILE
23
n
24
ILE
23
A
ALA
24
n
25
ALA
24
A
ALA
25
n
26
ALA
25
A
GLY
26
n
27
GLY
26
A
GLU
27
n
28
GLU
27
A
MET
28
n
29
MET
28
A
LEU
29
n
30
LEU
29
A
GLY
30
n
31
GLY
30
A
LYS
31
n
32
LYS
31
A
ASP
32
n
33
ASP
32
A
GLN
33
n
34
GLN
33
A
PRO
34
n
35
PRO
34
A
VAL
35
n
36
VAL
35
A
ILE
36
n
37
ILE
36
A
LEU
37
n
38
LEU
37
A
GLN
38
n
39
GLN
38
A
LEU
39
n
40
LEU
39
A
LEU
40
n
41
LEU
40
A
GLU
41
n
42
GLU
41
A
ILE
42
n
43
ILE
42
A
PRO
43
n
44
PRO
43
A
GLN
44
n
45
GLN
44
A
ALA
45
n
46
ALA
45
A
MET
46
n
47
MET
46
A
LYS
47
n
48
LYS
47
A
ALA
48
n
49
ALA
48
A
LEU
49
n
50
LEU
49
A
GLU
50
n
51
GLU
50
A
GLY
51
n
52
GLY
51
A
VAL
52
n
53
VAL
52
A
VAL
53
n
54
VAL
53
A
MET
54
n
55
MET
54
A
GLU
55
n
56
GLU
55
A
LEU
56
n
57
LEU
56
A
GLU
57
n
58
GLU
57
A
ASP
58
n
59
ASP
58
A
CYS
59
n
60
CYS
59
A
ALA
60
n
61
ALA
60
A
PHE
61
n
62
PHE
61
A
PRO
62
n
63
PRO
62
A
LEU
63
n
64
LEU
63
A
LEU
64
n
65
LEU
64
A
ALA
65
n
66
ALA
65
A
GLY
66
n
67
GLY
66
A
LEU
67
n
68
LEU
67
A
GLU
68
n
69
GLU
68
A
ALA
69
n
70
ALA
69
A
THR
70
n
71
THR
70
A
ASP
71
n
72
ASP
71
A
ASP
72
n
73
ASP
72
A
PRO
73
n
74
PRO
73
A
ASP
74
n
75
ASP
74
A
VAL
75
n
76
VAL
75
A
ALA
76
n
77
ALA
76
A
PHE
77
n
78
PHE
77
A
LYS
78
n
79
LYS
78
A
ASP
79
n
80
ASP
79
A
ALA
80
n
81
ALA
80
A
ASP
81
n
82
ASP
81
A
TYR
82
n
83
TYR
82
A
ALA
83
n
84
ALA
83
A
LEU
84
n
85
LEU
84
A
LEU
85
n
86
LEU
85
A
VAL
86
n
87
VAL
86
A
GLY
87
n
88
GLY
87
A
ALA
88
n
89
ALA
88
A
ALA
89
n
90
ALA
89
A
PRO
90
n
91
PRO
90
A
ARG
91
n
92
ARG
91
A
LYS
92
n
93
LYS
92
A
ALA
93
n
94
ALA
93
A
GLY
94
n
95
GLY
94
A
MET
95
n
96
MET
95
A
GLU
96
n
97
GLU
96
A
ARG
97
n
98
ARG
97
A
ARG
98
n
99
ARG
98
A
ASP
99
n
100
ASP
99
A
LEU
100
n
101
LEU
100
A
LEU
101
n
102
LEU
101
A
GLN
102
n
103
GLN
102
A
VAL
103
n
104
VAL
103
A
ASN
104
n
105
ASN
104
A
GLY
105
n
106
GLY
105
A
LYS
106
n
107
LYS
106
A
ILE
107
n
108
ILE
107
A
PHE
108
n
109
PHE
108
A
THR
109
n
110
THR
109
A
GLU
110
n
111
GLU
110
A
GLN
111
n
112
GLN
111
A
GLY
112
n
113
GLY
112
A
ARG
113
n
114
ARG
113
A
ALA
114
n
115
ALA
114
A
LEU
115
n
116
LEU
115
A
ALA
116
n
117
ALA
116
A
GLU
117
n
118
GLU
117
A
VAL
118
n
119
VAL
118
A
ALA
119
n
120
ALA
119
A
LYS
120
n
121
LYS
120
A
LYS
121
n
122
LYS
121
A
ASP
122
n
123
ASP
122
A
VAL
123
n
124
VAL
123
A
LYS
124
n
125
LYS
124
A
VAL
125
n
126
VAL
125
A
LEU
126
n
127
LEU
126
A
VAL
127
n
128
VAL
127
A
VAL
128
n
129
VAL
128
A
GLY
129
n
130
GLY
129
A
ASN
130
n
131
ASN
130
A
PRO
131
n
132
PRO
131
A
ALA
132
n
133
ALA
132
A
ASN
133
n
134
ASN
133
A
THR
134
n
135
THR
134
A
ASN
135
n
136
ASN
135
A
ALA
136
n
137
ALA
136
A
LEU
137
n
138
LEU
137
A
ILE
138
n
139
ILE
138
A
ALA
139
n
140
ALA
139
A
TYR
140
n
141
TYR
140
A
LYS
141
n
142
LYS
141
A
ASN
142
n
143
ASN
142
A
ALA
143
n
144
ALA
143
A
PRO
144
n
145
PRO
144
A
GLY
145
n
146
GLY
145
A
LEU
146
n
147
LEU
146
A
ASN
147
n
148
ASN
147
A
PRO
148
n
149
PRO
148
A
ARG
149
n
150
ARG
149
A
ASN
150
n
151
ASN
150
A
PHE
151
n
152
PHE
151
A
THR
152
n
153
THR
152
A
ALA
153
n
154
ALA
153
A
MET
154
n
155
MET
154
A
THR
155
n
156
THR
155
A
ARG
156
n
157
ARG
156
A
LEU
157
n
158
LEU
157
A
ASP
158
n
159
ASP
158
A
HIS
159
n
160
HIS
159
A
ASN
160
n
161
ASN
160
A
ARG
161
n
162
ARG
161
A
ALA
162
n
163
ALA
162
A
LYS
163
n
164
LYS
163
A
ALA
164
n
165
ALA
164
A
GLN
165
n
166
GLN
165
A
LEU
166
n
167
LEU
166
A
ALA
167
n
168
ALA
167
A
LYS
168
n
169
LYS
168
A
LYS
169
n
170
LYS
169
A
THR
170
n
171
THR
170
A
GLY
171
n
172
GLY
171
A
THR
172
n
173
THR
172
A
GLY
173
n
174
GLY
173
A
VAL
174
n
175
VAL
174
A
ASP
175
n
176
ASP
175
A
ARG
176
n
177
ARG
176
A
ILE
177
n
178
ILE
177
A
ARG
178
n
179
ARG
178
A
ARG
179
n
180
ARG
179
A
MET
180
n
181
MET
180
A
THR
181
n
182
THR
181
A
VAL
182
n
183
VAL
182
A
TRP
183
n
184
TRP
183
A
GLY
184
n
185
GLY
184
A
ASN
185
n
186
ASN
185
A
HIS
186
n
187
HIS
186
A
SER
187
n
188
SER
187
A
SER
188
n
189
SER
188
A
THR
189
n
190
THR
189
A
MET
190
n
191
MET
190
A
PHE
191
n
192
PHE
191
A
PRO
192
n
193
PRO
192
A
ASP
193
n
194
ASP
193
A
LEU
194
n
195
LEU
194
A
PHE
195
n
196
PHE
195
A
HIS
196
n
197
HIS
196
A
ALA
197
n
198
ALA
197
A
GLU
198
n
199
GLU
198
A
VAL
199
n
200
VAL
199
A
ASP
200
n
201
ASP
200
A
GLY
205
n
202
GLY
205
A
ARG
206
n
203
ARG
206
A
PRO
207
n
204
PRO
207
A
ALA
208
n
205
ALA
208
A
LEU
209
n
206
LEU
209
A
GLU
210
n
207
GLU
210
A
LEU
211
n
208
LEU
211
A
VAL
212
n
209
VAL
212
A
ASP
214
n
210
ASP
214
A
MET
215
n
211
MET
215
A
GLU
216
n
212
GLU
216
A
TRP
217
n
213
TRP
217
A
TYR
218
n
214
TYR
218
A
GLU
219
n
215
GLU
219
A
LYS
220
n
216
LYS
220
A
VAL
221
n
217
VAL
221
A
PHE
222
n
218
PHE
222
A
ILE
223
n
219
ILE
223
A
PRO
224
n
220
PRO
224
A
THR
225
n
221
THR
225
A
VAL
226
n
222
VAL
226
A
ALA
227
n
223
ALA
227
A
GLN
228
n
224
GLN
228
A
ARG
229
n
225
ARG
229
A
GLY
230
n
226
GLY
230
A
ALA
231
n
227
ALA
231
A
ALA
232
n
228
ALA
232
A
ILE
233
n
229
ILE
233
A
ILE
234
n
230
ILE
234
A
GLN
235
n
231
GLN
235
A
ALA
236
n
232
ALA
236
A
ARG
237
n
233
ARG
237
A
GLY
238
n
234
GLY
238
A
ALA
239
n
235
ALA
239
A
SER
240
n
236
SER
240
A
SER
241
n
237
SER
241
A
ALA
242
n
238
ALA
242
A
ALA
243
n
239
ALA
243
A
SER
244
n
240
SER
244
A
ALA
245
n
241
ALA
245
A
ALA
246
n
242
ALA
246
A
ASN
247
n
243
ASN
247
A
ALA
248
n
244
ALA
248
A
ALA
249
n
245
ALA
249
A
ILE
250
n
246
ILE
250
A
GLU
251
n
247
GLU
251
A
HIS
252
n
248
HIS
252
A
ILE
253
n
249
ILE
253
A
ARG
254
n
250
ARG
254
A
ASP
255
n
251
ASP
255
A
TRP
256
n
252
TRP
256
A
ALA
257
n
253
ALA
257
A
LEU
258
n
254
LEU
258
A
GLY
259
n
255
GLY
259
A
THR
260
n
256
THR
260
A
PRO
261
n
257
PRO
261
A
GLU
262
n
258
GLU
262
A
GLY
263
n
259
GLY
263
A
ASP
264
n
260
ASP
264
A
TRP
265
n
261
TRP
265
A
VAL
266
n
262
VAL
266
A
SER
267
n
263
SER
267
A
MET
268
n
264
MET
268
A
ALA
269
n
265
ALA
269
A
VAL
270
n
266
VAL
270
A
PRO
271
n
267
PRO
271
A
SER
272
n
268
SER
272
A
GLN
273
n
269
GLN
273
A
GLY
274
n
270
GLY
274
A
GLU
275
n
271
GLU
275
A
TYR
277
n
272
TYR
277
A
GLY
278
n
273
GLY
278
A
ILE
279
n
274
ILE
279
A
PRO
280
n
275
PRO
280
A
GLU
281
n
276
GLU
281
A
GLY
282
n
277
GLY
282
A
ILE
283
n
278
ILE
283
A
VAL
284
n
279
VAL
284
A
TYR
285
n
280
TYR
285
A
SER
286
n
281
SER
286
A
PHE
287
n
282
PHE
287
A
PRO
288
n
283
PRO
288
A
VAL
289
n
284
VAL
289
A
THR
290
n
285
THR
290
A
ALA
291
n
286
ALA
291
A
LYS
292
n
287
LYS
292
A
ASP
293
n
288
ASP
293
A
GLY
294
n
289
GLY
294
A
ALA
295
n
290
ALA
295
A
TYR
296
n
291
TYR
296
A
ARG
297
n
292
ARG
297
A
VAL
298
n
293
VAL
298
A
VAL
299
n
294
VAL
299
A
GLU
300
n
295
GLU
300
A
GLY
301
n
296
GLY
301
A
LEU
302
n
297
LEU
302
A
GLU
303
n
298
GLU
303
A
ILE
304
n
299
ILE
304
A
ASN
305
n
300
ASN
305
A
GLU
306
n
301
GLU
306
A
PHE
307
n
302
PHE
307
A
ALA
308
n
303
ALA
308
A
ARG
309
n
304
ARG
309
A
LYS
310
n
305
LYS
310
A
ARG
311
n
306
ARG
311
A
MET
312
n
307
MET
312
A
GLU
313
n
308
GLU
313
A
ILE
314
n
309
ILE
314
A
THR
315
n
310
THR
315
A
ALA
316
n
311
ALA
316
A
GLN
317
n
312
GLN
317
A
GLU
318
n
313
GLU
318
A
LEU
319
n
314
LEU
319
A
LEU
320
n
315
LEU
320
A
ASP
321
n
316
ASP
321
A
GLU
322
n
317
GLU
322
A
MET
323
n
318
MET
323
A
GLU
324
n
319
GLU
324
A
GLN
325
n
320
GLN
325
A
VAL
326
n
321
VAL
326
A
LYS
327
n
322
LYS
327
A
ALA
328
n
323
ALA
328
A
LEU
329
n
324
LEU
329
A
GLY
330
n
325
GLY
330
A
LEU
331
n
326
LEU
331
A
ILE
332
n
327
ILE
332
A
MET
0
n
1
MET
0
B
LYS
1
n
2
LYS
1
B
ALA
2
n
3
ALA
2
B
PRO
3
n
4
PRO
3
B
VAL
4
n
5
VAL
4
B
ARG
5
n
6
ARG
5
B
VAL
6
n
7
VAL
6
B
ALA
7
n
8
ALA
7
B
VAL
8
n
9
VAL
8
B
THR
9
n
10
THR
9
B
GLY
10
n
11
GLY
10
B
ALA
11
n
12
ALA
11
B
ALA
12
n
13
ALA
12
B
GLY
13
n
14
GLY
13
B
GLN
14
n
15
GLN
14
B
ILE
15
n
16
ILE
15
B
GLY
16
n
17
GLY
16
B
TYR
17
n
18
TYR
17
B
SER
18
n
19
SER
18
B
LEU
19
n
20
LEU
19
B
LEU
20
n
21
LEU
20
B
PHE
21
n
22
PHE
21
B
ARG
22
n
23
ARG
22
B
ILE
23
n
24
ILE
23
B
ALA
24
n
25
ALA
24
B
ALA
25
n
26
ALA
25
B
GLY
26
n
27
GLY
26
B
GLU
27
n
28
GLU
27
B
MET
28
n
29
MET
28
B
LEU
29
n
30
LEU
29
B
GLY
30
n
31
GLY
30
B
LYS
31
n
32
LYS
31
B
ASP
32
n
33
ASP
32
B
GLN
33
n
34
GLN
33
B
PRO
34
n
35
PRO
34
B
VAL
35
n
36
VAL
35
B
ILE
36
n
37
ILE
36
B
LEU
37
n
38
LEU
37
B
GLN
38
n
39
GLN
38
B
LEU
39
n
40
LEU
39
B
LEU
40
n
41
LEU
40
B
GLU
41
n
42
GLU
41
B
ILE
42
n
43
ILE
42
B
PRO
43
n
44
PRO
43
B
GLN
44
n
45
GLN
44
B
ALA
45
n
46
ALA
45
B
MET
46
n
47
MET
46
B
LYS
47
n
48
LYS
47
B
ALA
48
n
49
ALA
48
B
LEU
49
n
50
LEU
49
B
GLU
50
n
51
GLU
50
B
GLY
51
n
52
GLY
51
B
VAL
52
n
53
VAL
52
B
VAL
53
n
54
VAL
53
B
MET
54
n
55
MET
54
B
GLU
55
n
56
GLU
55
B
LEU
56
n
57
LEU
56
B
GLU
57
n
58
GLU
57
B
ASP
58
n
59
ASP
58
B
CYS
59
n
60
CYS
59
B
ALA
60
n
61
ALA
60
B
PHE
61
n
62
PHE
61
B
PRO
62
n
63
PRO
62
B
LEU
63
n
64
LEU
63
B
LEU
64
n
65
LEU
64
B
ALA
65
n
66
ALA
65
B
GLY
66
n
67
GLY
66
B
LEU
67
n
68
LEU
67
B
GLU
68
n
69
GLU
68
B
ALA
69
n
70
ALA
69
B
THR
70
n
71
THR
70
B
ASP
71
n
72
ASP
71
B
ASP
72
n
73
ASP
72
B
PRO
73
n
74
PRO
73
B
ASP
74
n
75
ASP
74
B
VAL
75
n
76
VAL
75
B
ALA
76
n
77
ALA
76
B
PHE
77
n
78
PHE
77
B
LYS
78
n
79
LYS
78
B
ASP
79
n
80
ASP
79
B
ALA
80
n
81
ALA
80
B
ASP
81
n
82
ASP
81
B
TYR
82
n
83
TYR
82
B
ALA
83
n
84
ALA
83
B
LEU
84
n
85
LEU
84
B
LEU
85
n
86
LEU
85
B
VAL
86
n
87
VAL
86
B
GLY
87
n
88
GLY
87
B
ALA
88
n
89
ALA
88
B
ALA
89
n
90
ALA
89
B
PRO
90
n
91
PRO
90
B
ARG
91
n
92
ARG
91
B
LYS
92
n
93
LYS
92
B
ALA
93
n
94
ALA
93
B
GLY
94
n
95
GLY
94
B
MET
95
n
96
MET
95
B
GLU
96
n
97
GLU
96
B
ARG
97
n
98
ARG
97
B
ARG
98
n
99
ARG
98
B
ASP
99
n
100
ASP
99
B
LEU
100
n
101
LEU
100
B
LEU
101
n
102
LEU
101
B
GLN
102
n
103
GLN
102
B
VAL
103
n
104
VAL
103
B
ASN
104
n
105
ASN
104
B
GLY
105
n
106
GLY
105
B
LYS
106
n
107
LYS
106
B
ILE
107
n
108
ILE
107
B
PHE
108
n
109
PHE
108
B
THR
109
n
110
THR
109
B
GLU
110
n
111
GLU
110
B
GLN
111
n
112
GLN
111
B
GLY
112
n
113
GLY
112
B
ARG
113
n
114
ARG
113
B
ALA
114
n
115
ALA
114
B
LEU
115
n
116
LEU
115
B
ALA
116
n
117
ALA
116
B
GLU
117
n
118
GLU
117
B
VAL
118
n
119
VAL
118
B
ALA
119
n
120
ALA
119
B
LYS
120
n
121
LYS
120
B
LYS
121
n
122
LYS
121
B
ASP
122
n
123
ASP
122
B
VAL
123
n
124
VAL
123
B
LYS
124
n
125
LYS
124
B
VAL
125
n
126
VAL
125
B
LEU
126
n
127
LEU
126
B
VAL
127
n
128
VAL
127
B
VAL
128
n
129
VAL
128
B
GLY
129
n
130
GLY
129
B
ASN
130
n
131
ASN
130
B
PRO
131
n
132
PRO
131
B
ALA
132
n
133
ALA
132
B
ASN
133
n
134
ASN
133
B
THR
134
n
135
THR
134
B
ASN
135
n
136
ASN
135
B
ALA
136
n
137
ALA
136
B
LEU
137
n
138
LEU
137
B
ILE
138
n
139
ILE
138
B
ALA
139
n
140
ALA
139
B
TYR
140
n
141
TYR
140
B
LYS
141
n
142
LYS
141
B
ASN
142
n
143
ASN
142
B
ALA
143
n
144
ALA
143
B
PRO
144
n
145
PRO
144
B
GLY
145
n
146
GLY
145
B
LEU
146
n
147
LEU
146
B
ASN
147
n
148
ASN
147
B
PRO
148
n
149
PRO
148
B
ARG
149
n
150
ARG
149
B
ASN
150
n
151
ASN
150
B
PHE
151
n
152
PHE
151
B
THR
152
n
153
THR
152
B
ALA
153
n
154
ALA
153
B
MET
154
n
155
MET
154
B
THR
155
n
156
THR
155
B
ARG
156
n
157
ARG
156
B
LEU
157
n
158
LEU
157
B
ASP
158
n
159
ASP
158
B
HIS
159
n
160
HIS
159
B
ASN
160
n
161
ASN
160
B
ARG
161
n
162
ARG
161
B
ALA
162
n
163
ALA
162
B
LYS
163
n
164
LYS
163
B
ALA
164
n
165
ALA
164
B
GLN
165
n
166
GLN
165
B
LEU
166
n
167
LEU
166
B
ALA
167
n
168
ALA
167
B
LYS
168
n
169
LYS
168
B
LYS
169
n
170
LYS
169
B
THR
170
n
171
THR
170
B
GLY
171
n
172
GLY
171
B
THR
172
n
173
THR
172
B
GLY
173
n
174
GLY
173
B
VAL
174
n
175
VAL
174
B
ASP
175
n
176
ASP
175
B
ARG
176
n
177
ARG
176
B
ILE
177
n
178
ILE
177
B
ARG
178
n
179
ARG
178
B
ARG
179
n
180
ARG
179
B
MET
180
n
181
MET
180
B
THR
181
n
182
THR
181
B
VAL
182
n
183
VAL
182
B
TRP
183
n
184
TRP
183
B
GLY
184
n
185
GLY
184
B
ASN
185
n
186
ASN
185
B
HIS
186
n
187
HIS
186
B
SER
187
n
188
SER
187
B
SER
188
n
189
SER
188
B
THR
189
n
190
THR
189
B
MET
190
n
191
MET
190
B
PHE
191
n
192
PHE
191
B
PRO
192
n
193
PRO
192
B
ASP
193
n
194
ASP
193
B
LEU
194
n
195
LEU
194
B
PHE
195
n
196
PHE
195
B
HIS
196
n
197
HIS
196
B
ALA
197
n
198
ALA
197
B
GLU
198
n
199
GLU
198
B
VAL
199
n
200
VAL
199
B
ASP
200
n
201
ASP
200
B
GLY
205
n
202
GLY
205
B
ARG
206
n
203
ARG
206
B
PRO
207
n
204
PRO
207
B
ALA
208
n
205
ALA
208
B
LEU
209
n
206
LEU
209
B
GLU
210
n
207
GLU
210
B
LEU
211
n
208
LEU
211
B
VAL
212
n
209
VAL
212
B
ASP
214
n
210
ASP
214
B
MET
215
n
211
MET
215
B
GLU
216
n
212
GLU
216
B
TRP
217
n
213
TRP
217
B
TYR
218
n
214
TYR
218
B
GLU
219
n
215
GLU
219
B
LYS
220
n
216
LYS
220
B
VAL
221
n
217
VAL
221
B
PHE
222
n
218
PHE
222
B
ILE
223
n
219
ILE
223
B
PRO
224
n
220
PRO
224
B
THR
225
n
221
THR
225
B
VAL
226
n
222
VAL
226
B
ALA
227
n
223
ALA
227
B
GLN
228
n
224
GLN
228
B
ARG
229
n
225
ARG
229
B
GLY
230
n
226
GLY
230
B
ALA
231
n
227
ALA
231
B
ALA
232
n
228
ALA
232
B
ILE
233
n
229
ILE
233
B
ILE
234
n
230
ILE
234
B
GLN
235
n
231
GLN
235
B
ALA
236
n
232
ALA
236
B
ARG
237
n
233
ARG
237
B
GLY
238
n
234
GLY
238
B
ALA
239
n
235
ALA
239
B
SER
240
n
236
SER
240
B
SER
241
n
237
SER
241
B
ALA
242
n
238
ALA
242
B
ALA
243
n
239
ALA
243
B
SER
244
n
240
SER
244
B
ALA
245
n
241
ALA
245
B
ALA
246
n
242
ALA
246
B
ASN
247
n
243
ASN
247
B
ALA
248
n
244
ALA
248
B
ALA
249
n
245
ALA
249
B
ILE
250
n
246
ILE
250
B
GLU
251
n
247
GLU
251
B
HIS
252
n
248
HIS
252
B
ILE
253
n
249
ILE
253
B
ARG
254
n
250
ARG
254
B
ASP
255
n
251
ASP
255
B
TRP
256
n
252
TRP
256
B
ALA
257
n
253
ALA
257
B
LEU
258
n
254
LEU
258
B
GLY
259
n
255
GLY
259
B
THR
260
n
256
THR
260
B
PRO
261
n
257
PRO
261
B
GLU
262
n
258
GLU
262
B
GLY
263
n
259
GLY
263
B
ASP
264
n
260
ASP
264
B
TRP
265
n
261
TRP
265
B
VAL
266
n
262
VAL
266
B
SER
267
n
263
SER
267
B
MET
268
n
264
MET
268
B
ALA
269
n
265
ALA
269
B
VAL
270
n
266
VAL
270
B
PRO
271
n
267
PRO
271
B
SER
272
n
268
SER
272
B
GLN
273
n
269
GLN
273
B
GLY
274
n
270
GLY
274
B
GLU
275
n
271
GLU
275
B
TYR
277
n
272
TYR
277
B
GLY
278
n
273
GLY
278
B
ILE
279
n
274
ILE
279
B
PRO
280
n
275
PRO
280
B
GLU
281
n
276
GLU
281
B
GLY
282
n
277
GLY
282
B
ILE
283
n
278
ILE
283
B
VAL
284
n
279
VAL
284
B
TYR
285
n
280
TYR
285
B
SER
286
n
281
SER
286
B
PHE
287
n
282
PHE
287
B
PRO
288
n
283
PRO
288
B
VAL
289
n
284
VAL
289
B
THR
290
n
285
THR
290
B
ALA
291
n
286
ALA
291
B
LYS
292
n
287
LYS
292
B
ASP
293
n
288
ASP
293
B
GLY
294
n
289
GLY
294
B
ALA
295
n
290
ALA
295
B
TYR
296
n
291
TYR
296
B
ARG
297
n
292
ARG
297
B
VAL
298
n
293
VAL
298
B
VAL
299
n
294
VAL
299
B
GLU
300
n
295
GLU
300
B
GLY
301
n
296
GLY
301
B
LEU
302
n
297
LEU
302
B
GLU
303
n
298
GLU
303
B
ILE
304
n
299
ILE
304
B
ASN
305
n
300
ASN
305
B
GLU
306
n
301
GLU
306
B
PHE
307
n
302
PHE
307
B
ALA
308
n
303
ALA
308
B
ARG
309
n
304
ARG
309
B
LYS
310
n
305
LYS
310
B
ARG
311
n
306
ARG
311
B
MET
312
n
307
MET
312
B
GLU
313
n
308
GLU
313
B
ILE
314
n
309
ILE
314
B
THR
315
n
310
THR
315
B
ALA
316
n
311
ALA
316
B
GLN
317
n
312
GLN
317
B
GLU
318
n
313
GLU
318
B
LEU
319
n
314
LEU
319
B
LEU
320
n
315
LEU
320
B
ASP
321
n
316
ASP
321
B
GLU
322
n
317
GLU
322
B
MET
323
n
318
MET
323
B
GLU
324
n
319
GLU
324
B
GLN
325
n
320
GLN
325
B
VAL
326
n
321
VAL
326
B
LYS
327
n
322
LYS
327
B
ALA
328
n
323
ALA
328
B
LEU
329
n
324
LEU
329
B
GLY
330
n
325
GLY
330
B
LEU
331
n
326
LEU
331
B
ILE
332
n
327
ILE
332
B
author_and_software_defined_assembly
PISA
2
dimeric
5390
-25
24970
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
HIS
186
10.39
1
-3.18
0.50
120.30
117.12
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
5
5
5
N
1
4.43
0.50
120.30
124.73
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
5
5
5
N
1
7.12
0.90
118.30
125.42
A
A
A
CB
CG
OD1
ASP
ASP
ASP
71
71
71
N
1
-6.29
0.90
118.30
112.01
A
A
A
CB
CG
OD2
ASP
ASP
ASP
71
71
71
N
1
6.17
0.90
118.30
124.47
A
A
A
CB
CG
OD1
ASP
ASP
ASP
72
72
72
N
1
-7.32
0.90
118.30
110.98
A
A
A
CB
CG
OD2
ASP
ASP
ASP
72
72
72
N
1
3.51
0.50
120.30
123.81
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
97
97
97
N
1
-3.00
0.50
120.30
117.30
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
98
98
98
N
1
6.96
0.90
118.30
125.26
A
A
A
CB
CG
OD2
ASP
ASP
ASP
122
122
122
N
1
-14.35
2.10
128.40
114.05
A
A
A
C
N
CD
ALA
PRO
PRO
143
144
144
Y
1
-6.16
0.90
118.30
112.14
A
A
A
CB
CG
OD2
ASP
ASP
ASP
175
175
175
N
1
-6.86
0.90
118.30
111.44
A
A
A
CB
CG
OD2
ASP
ASP
ASP
193
193
193
N
1
-6.18
0.90
118.30
112.12
A
A
A
CB
CG
OD1
ASP
ASP
ASP
200
200
200
N
1
-3.03
0.50
120.30
117.27
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
206
206
206
N
1
6.41
0.90
118.30
124.71
A
A
A
CB
CG
OD1
ASP
ASP
ASP
214
214
214
N
1
-8.22
0.90
118.30
110.08
A
A
A
CB
CG
OD2
ASP
ASP
ASP
214
214
214
N
1
3.07
0.50
120.30
123.37
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
237
237
237
N
1
-4.72
0.50
120.30
115.58
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
237
237
237
N
1
5.73
0.90
118.30
124.03
A
A
A
CB
CG
OD1
ASP
ASP
ASP
264
264
264
N
1
-5.75
0.90
118.30
112.55
A
A
A
CB
CG
OD2
ASP
ASP
ASP
264
264
264
N
1
-4.90
0.50
120.30
115.40
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
297
297
297
N
1
3.15
0.50
120.30
123.45
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
297
297
297
N
1
5.57
0.90
118.30
123.87
A
A
A
CB
CG
OD2
ASP
ASP
ASP
321
321
321
N
1
6.42
0.90
118.30
124.72
B
B
B
CB
CG
OD1
ASP
ASP
ASP
32
32
32
N
1
6.49
0.90
118.30
124.79
B
B
B
CB
CG
OD1
ASP
ASP
ASP
58
58
58
N
1
6.50
0.90
118.30
124.80
B
B
B
CB
CG
OD1
ASP
ASP
ASP
71
71
71
N
1
-7.90
0.90
118.30
110.40
B
B
B
CB
CG
OD2
ASP
ASP
ASP
71
71
71
N
1
-7.91
0.90
118.30
110.39
B
B
B
CB
CG
OD1
ASP
ASP
ASP
74
74
74
N
1
8.45
0.90
118.30
126.75
B
B
B
CB
CG
OD2
ASP
ASP
ASP
74
74
74
N
1
6.54
0.90
118.30
124.84
B
B
B
CB
CG
OD2
ASP
ASP
ASP
79
79
79
N
1
-15.82
2.10
128.40
112.58
B
B
B
C
N
CD
ALA
PRO
PRO
89
90
90
Y
1
6.33
0.50
120.30
126.63
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
91
91
91
N
1
-19.25
1.80
110.60
91.35
B
B
B
N
CA
CB
GLU
GLU
GLU
96
96
96
N
1
3.57
0.50
120.30
123.87
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
98
98
98
N
1
-7.31
0.90
118.30
110.99
B
B
B
CB
CG
OD2
ASP
ASP
ASP
122
122
122
1
1
1
N
1
-7.01
0.90
118.30
111.29
B
B
B
CB
CG
OD2
ASP
ASP
ASP
122
122
122
2
2
2
N
1
-12.87
2.10
128.40
115.53
B
B
B
C
N
CD
ALA
PRO
PRO
143
144
144
Y
1
-5.33
0.50
120.30
114.97
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
178
178
178
N
1
8.93
0.90
118.30
127.23
B
B
B
CB
CG
OD1
ASP
ASP
ASP
193
193
193
N
1
-9.49
0.90
118.30
108.81
B
B
B
CB
CG
OD2
ASP
ASP
ASP
193
193
193
N
1
11.88
1.80
110.60
122.48
B
B
B
N
CA
CB
LYS
LYS
LYS
220
220
220
N
1
-3.10
0.50
120.30
117.20
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
254
254
254
N
1
5.80
0.90
118.30
124.10
B
B
B
CB
CG
OD1
ASP
ASP
ASP
293
293
293
N
1
3.94
0.50
120.30
124.24
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
311
311
311
N
1
A
A
CD
OE1
GLU
GLU
50
50
0.073
0.011
1.252
1.325
N
1
A
A
CD
OE1
GLU
GLU
68
68
0.067
0.011
1.252
1.319
N
1
A
A
CD
OE1
GLU
GLU
96
96
0.087
0.011
1.252
1.339
N
1
A
A
CD
OE1
GLU
GLU
110
110
0.069
0.011
1.252
1.321
N
1
A
A
CD
OE1
GLU
GLU
198
198
0.067
0.011
1.252
1.319
N
1
A
A
CD
OE1
GLU
GLU
210
210
0.072
0.011
1.252
1.324
N
1
A
A
CD
OE1
GLU
GLU
216
216
0.078
0.011
1.252
1.330
N
1
A
A
CD
OE1
GLU
GLU
219
219
0.072
0.011
1.252
1.324
N
1
A
A
CD
OE1
GLU
GLU
262
262
0.079
0.011
1.252
1.331
N
1
A
A
CD
OE1
GLU
GLU
281
281
0.074
0.011
1.252
1.326
N
1
A
A
CD
OE2
GLU
GLU
300
300
0.066
0.011
1.252
1.318
N
1
A
A
CD
OE2
GLU
GLU
303
303
0.067
0.011
1.252
1.319
N
1
A
A
CD
OE1
GLU
GLU
306
306
0.075
0.011
1.252
1.327
N
1
A
A
CD
OE2
GLU
GLU
313
313
0.070
0.011
1.252
1.322
N
1
A
A
CD
OE2
GLU
GLU
324
324
0.090
0.011
1.252
1.342
N
1
B
B
CD
OE2
GLU
GLU
27
27
-0.069
0.011
1.252
1.183
2
2
N
1
B
B
CD
OE2
GLU
GLU
50
50
0.070
0.011
1.252
1.322
N
1
B
B
CD
OE1
GLU
GLU
68
68
0.080
0.011
1.252
1.332
N
1
B
B
CD
OE1
GLU
GLU
96
96
0.090
0.011
1.252
1.342
N
1
B
B
CD
OE2
GLU
GLU
117
117
0.070
0.011
1.252
1.322
N
1
B
B
CD
OE1
GLU
GLU
210
210
0.083
0.011
1.252
1.335
N
1
B
B
CD
OE1
GLU
GLU
216
216
0.069
0.011
1.252
1.321
N
1
B
B
CD
OE2
GLU
GLU
251
251
-0.076
0.011
1.252
1.176
N
1
B
B
CD
OE2
GLU
GLU
262
262
0.094
0.011
1.252
1.346
N
1
B
B
CD
OE2
GLU
GLU
303
303
0.066
0.011
1.252
1.318
N
1
B
B
CD
OE2
GLU
GLU
306
306
0.081
0.011
1.252
1.333
N
1
B
B
CD
OE1
GLU
GLU
313
313
0.083
0.011
1.252
1.335
N
1
B
B
CD
OE1
GLU
GLU
324
324
0.087
0.011
1.252
1.339
N
1
A
ARG
97
-46.09
-75.04
1
A
LEU
258
-92.02
-60.14
1
B
ALA
143
-119.73
65.70
1
B
SER
187
-165.30
-166.06
0.1540000
0.1540000
1.9
1
1.9
288
5366
88
0
4990
0.016
2.85
model building
X-PLOR
refinement
TNT
refinement
X-PLOR
phasing
X-PLOR
DETERMINANTS OF PROTEIN THERMOSTABILITY OBSERVED IN THE 1.9 ANGSTROMS CRYSTAL STRUCTURE OF MALATE DEHYDROGENASE FROM THE THERMOPHILIC BACTERIUM THERMUS FLAVUS
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
THE ASYMMETRIC UNIT CONTAINS TWO SUBUNITS WHICH HAVE BEEN
ASSIGNED CHAIN IDENTIFIERS *A* AND *B*. THEY ARE RELATED
BY A NON-CRYSTALLOGRAPHIC SYMMETRY AXIS WITH A ROTATION
ANGLE OF 180.0 DEGREES. THE TRANSFORMATION PRESENTED ON
*MTRIX* RECORDS BELOW YIELDS OPTIMAL SUPERPOSITION OF
SUBUNIT A UPON SUBUNIT B BASED UPON ALL ALPHA CARBON ATOMS.
A
GLN
14
A
GLN
15
HELX_P
A
ALA
24
A
ALA
25
1
BA
11
A
PRO
43
A
PRO
44
HELX_P
A
GLU
57
A
GLU
58
1
CA
15
A
PRO
73
A
PRO
74
HELX_P
A
ALA
76
A
ALA
77
1
CPA
4
A
ARG
97
A
ARG
98
HELX_P
A
VAL
118
A
VAL
119
1
DEA
22
A
ALA
132
A
ALA
133
HELX_P
A
LYS
141
A
LYS
142
1
1FA
10
A
ARG
156
A
ARG
157
HELX_P
A
THR
170
A
THR
171
1
2FA
15
A
ALA
208
A
ALA
205
HELX_P
A
VAL
212
A
VAL
209
1
GPA
5
A
MET
215
A
MET
211
HELX_P
A
ALA
227
A
ALA
223
1
1GA
13
A
ARG
229
A
ARG
225
HELX_P
A
ARG
237
A
ARG
233
1
2GA
9
A
ALA
242
A
ALA
238
HELX_P
A
ALA
257
A
ALA
253
1
3GA
16
A
GLU
306
A
GLU
301
HELX_P
A
ALA
328
A
ALA
323
1
HA
23
B
GLN
14
B
GLN
15
HELX_P
B
ALA
24
B
ALA
25
1
BB
11
B
PRO
43
B
PRO
44
HELX_P
B
GLU
57
B
GLU
58
1
CB
15
B
PRO
73
B
PRO
74
HELX_P
B
ALA
76
B
ALA
77
1
CPB
4
B
ARG
97
B
ARG
98
HELX_P
B
VAL
118
B
VAL
119
1
DEB
22
B
ALA
132
B
ALA
133
HELX_P
B
LYS
141
B
LYS
142
1
1FB
10
B
ARG
156
B
ARG
157
HELX_P
B
THR
170
B
THR
171
1
2FB
15
B
ALA
208
B
ALA
205
HELX_P
B
VAL
212
B
VAL
209
1
GPB
5
B
MET
215
B
MET
211
HELX_P
B
ALA
227
B
ALA
223
1
1GB
13
B
ARG
229
B
ARG
225
HELX_P
B
ARG
237
B
ARG
233
1
2GB
9
B
ALA
242
B
ALA
238
HELX_P
B
LEU
258
B
LEU
254
1
3GB
17
B
GLU
306
B
GLU
301
HELX_P
B
ALA
328
B
ALA
323
1
HB
23
OXIDOREDUCTASE(CHOH(D)-NAD+(A))
OXIDOREDUCTASE(CHOH(D)-NAD+(A))
A
ASN
130
A
ASN
131
1
A
PRO
131
A
PRO
132
-5.12
B
ASN
130
B
ASN
131
1
B
PRO
131
B
PRO
132
-3.28
given
-0.606800
0.002100
-0.794800
0.003600
-1.000000
-0.005500
-0.794800
-0.006200
0.606800
81.10670
50.92750
40.36920
MDH_THETH
UNP
1
1
P10584
MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKD
ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDH
NRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQARGASSAAS
AANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDEMEQ
VKALGLI
1
327
1BMD
0
332
P10584
A
1
1
327
1
327
1BMD
0
332
P10584
B
1
1
327
1
LYS
conflict
ASP
74
1BMD
A
P10584
UNP
75
75
2
LYS
conflict
ASP
74
1BMD
B
P10584
UNP
75
75
6
3
3
6
3
3
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
64
A
LEU
65
A
THR
70
A
THR
71
A
VAL
35
A
VAL
36
A
LEU
40
A
LEU
41
A
VAL
4
A
VAL
5
A
THR
9
A
THR
10
A
TYR
82
A
TYR
83
A
LEU
85
A
LEU
86
A
LYS
124
A
LYS
125
A
VAL
127
A
VAL
128
A
PHE
151
A
PHE
152
A
ALA
153
A
ALA
154
A
ILE
177
A
ILE
178
A
TRP
183
A
TRP
184
A
PHE
191
A
PHE
192
A
VAL
199
A
VAL
200
A
ARG
206
A
ARG
203
A
PRO
207
A
PRO
204
A
VAL
266
A
VAL
262
A
PRO
271
A
PRO
267
A
VAL
284
A
VAL
279
A
LYS
292
A
LYS
287
A
ALA
295
A
ALA
290
A
VAL
298
A
VAL
293
B
LEU
64
B
LEU
65
B
THR
70
B
THR
71
B
VAL
35
B
VAL
36
B
LEU
40
B
LEU
41
B
VAL
4
B
VAL
5
B
THR
9
B
THR
10
B
TYR
82
B
TYR
83
B
LEU
85
B
LEU
86
B
LYS
124
B
LYS
125
B
VAL
127
B
VAL
128
B
PHE
151
B
PHE
152
B
ALA
153
B
ALA
154
B
ILE
177
B
ILE
178
B
TRP
183
B
TRP
184
B
PHE
191
B
PHE
192
B
VAL
199
B
VAL
200
B
ARG
206
B
ARG
203
B
PRO
207
B
PRO
204
B
VAL
266
B
VAL
262
B
PRO
271
B
PRO
267
B
VAL
284
B
VAL
279
B
LYS
292
B
LYS
287
B
ALA
295
B
ALA
290
B
VAL
298
B
VAL
293
BINDING SITE FOR RESIDUE NAD A 334
A
NAD
334
Software
18
BINDING SITE FOR RESIDUE NAD B 334
B
NAD
334
Software
20
A
GLY
10
A
GLY
11
18
1_555
A
GLY
13
A
GLY
14
18
1_555
A
GLN
14
A
GLN
15
18
1_555
A
ILE
15
A
ILE
16
18
1_555
A
GLU
41
A
GLU
42
18
1_555
A
ILE
42
A
ILE
43
18
1_555
A
VAL
86
A
VAL
87
18
1_555
A
GLY
87
A
GLY
88
18
1_555
A
ALA
88
A
ALA
89
18
1_555
A
GLN
111
A
GLN
112
18
1_555
A
VAL
128
A
VAL
129
18
1_555
A
GLY
129
A
GLY
130
18
1_555
A
ASN
130
A
ASN
131
18
1_555
A
MET
154
A
MET
155
18
1_555
A
HIS
186
A
HIS
187
18
1_555
A
HOH
342
E
HOH
18
1_555
A
HOH
356
E
HOH
18
1_555
A
HOH
430
E
HOH
18
1_555
B
GLY
10
B
GLY
11
20
1_555
B
GLY
13
B
GLY
14
20
1_555
B
GLN
14
B
GLN
15
20
1_555
B
ILE
15
B
ILE
16
20
1_555
B
LEU
40
B
LEU
41
20
1_555
B
GLU
41
B
GLU
42
20
1_555
B
ILE
42
B
ILE
43
20
1_555
B
VAL
86
B
VAL
87
20
1_555
B
GLY
87
B
GLY
88
20
1_555
B
ALA
88
B
ALA
89
20
1_555
B
GLN
111
B
GLN
112
20
1_555
B
VAL
128
B
VAL
129
20
1_555
B
GLY
129
B
GLY
130
20
1_555
B
ASN
130
B
ASN
131
20
1_555
B
MET
154
B
MET
155
20
1_555
B
HIS
186
B
HIS
187
20
1_555
B
HOH
345
F
HOH
20
1_555
B
HOH
357
F
HOH
20
1_555
B
HOH
437
F
HOH
20
1_555
B
HOH
491
F
HOH
20
1_555
19
P 21 21 21