1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 CIS PROLINE - PRO 20 Zimmermann, G.R. Legault, P. Selsted, M.E. Pardi, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Biochemistry BICHAW 0033 0006-2960 34 13663 13671 10.1021/bi00041a048 7577957 Solution structure of bovine neutrophil beta-defensin-12: the peptide fold of the beta-defensins is identical to that of the classical defensins. 1995 US J.Biol.Chem. JBCHA3 0071 0021-9258 268 6641 Purification, Primary Structures, and Antibacterial Activities of Beta-Defensins, a New Family of Anti-Microbial Peptides from Bovine Neutrophils 1993 US J.Biol.Chem. JBCHA3 0071 0021-9258 268 6649 Characterization of the Disulfide Motif in Bndb-12, an Antimicrobial Beta-Defensin Peptide from Bovine Neutrophils 1993 10.2210/pdb1bnb/pdb pdb_00001bnb 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 4126.025 BOVINE NEUTROPHIL BETA-DEFENSIN 12 1 nat polymer no no APLSCGRNGGVCIPIRCPVPMRQIGTCFGRPVKCCRSW APLSCGRNGGVCIPIRCPVPMRQIGTCFGRPVKCCRSW A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n cattle Bos sample POLYMORPHONUCLEOCYTE 9913 NEUTROPHILS Bos taurus database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Database references Derived calculations Other 1 0 1995-10-15 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-02-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site Y BNL 1995-03-08 REL REL 20 ALA 1 n 1 ALA 1 A PRO 2 n 2 PRO 2 A LEU 3 n 3 LEU 3 A SER 4 n 4 SER 4 A CYS 5 n 5 CYS 5 A GLY 6 n 6 GLY 6 A ARG 7 n 7 ARG 7 A ASN 8 n 8 ASN 8 A GLY 9 n 9 GLY 9 A GLY 10 n 10 GLY 10 A VAL 11 n 11 VAL 11 A CYS 12 n 12 CYS 12 A ILE 13 n 13 ILE 13 A PRO 14 n 14 PRO 14 A ILE 15 n 15 ILE 15 A ARG 16 n 16 ARG 16 A CYS 17 n 17 CYS 17 A PRO 18 n 18 PRO 18 A VAL 19 n 19 VAL 19 A PRO 20 n 20 PRO 20 A MET 21 n 21 MET 21 A ARG 22 n 22 ARG 22 A GLN 23 n 23 GLN 23 A ILE 24 n 24 ILE 24 A GLY 25 n 25 GLY 25 A THR 26 n 26 THR 26 A CYS 27 n 27 CYS 27 A PHE 28 n 28 PHE 28 A GLY 29 n 29 GLY 29 A ARG 30 n 30 ARG 30 A PRO 31 n 31 PRO 31 A VAL 32 n 32 VAL 32 A LYS 33 n 33 LYS 33 A CYS 34 n 34 CYS 34 A CYS 35 n 35 CYS 35 A ARG 36 n 36 ARG 36 A SER 37 n 37 SER 37 A TRP 38 n 38 TRP 38 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O VAL 11 A O VAL 11 A N CYS 35 A N CYS 35 A O VAL 32 A O VAL 32 A N CYS 27 A N CYS 27 1 A ARG 7 0.284 SIDE CHAIN 1 A ARG 16 0.291 SIDE CHAIN 1 A ARG 22 0.319 SIDE CHAIN 1 A ARG 30 0.298 SIDE CHAIN 1 A ARG 36 0.127 SIDE CHAIN 2 A ARG 7 0.306 SIDE CHAIN 2 A ARG 16 0.318 SIDE CHAIN 2 A ARG 22 0.226 SIDE CHAIN 2 A ARG 30 0.312 SIDE CHAIN 2 A ARG 36 0.230 SIDE CHAIN 3 A ARG 7 0.305 SIDE CHAIN 3 A ARG 16 0.319 SIDE CHAIN 3 A ARG 22 0.318 SIDE CHAIN 3 A ARG 30 0.294 SIDE CHAIN 3 A ARG 36 0.272 SIDE CHAIN 4 A ARG 7 0.309 SIDE CHAIN 4 A ARG 16 0.319 SIDE CHAIN 4 A ARG 22 0.292 SIDE CHAIN 4 A ARG 30 0.305 SIDE CHAIN 4 A ARG 36 0.287 SIDE CHAIN 5 A ARG 7 0.275 SIDE CHAIN 5 A ARG 16 0.317 SIDE CHAIN 5 A ARG 22 0.275 SIDE CHAIN 5 A ARG 30 0.302 SIDE CHAIN 5 A ARG 36 0.319 SIDE CHAIN 6 A ARG 7 0.303 SIDE CHAIN 6 A ARG 16 0.298 SIDE CHAIN 6 A ARG 22 0.319 SIDE CHAIN 6 A ARG 30 0.283 SIDE CHAIN 6 A ARG 36 0.185 SIDE CHAIN 7 A ARG 7 0.319 SIDE CHAIN 7 A ARG 16 0.285 SIDE CHAIN 7 A ARG 22 0.257 SIDE CHAIN 7 A ARG 30 0.307 SIDE CHAIN 7 A ARG 36 0.313 SIDE CHAIN 8 A ARG 7 0.309 SIDE CHAIN 8 A ARG 16 0.303 SIDE CHAIN 8 A ARG 22 0.310 SIDE CHAIN 8 A ARG 30 0.305 SIDE CHAIN 8 A ARG 36 0.174 SIDE CHAIN 9 A ARG 7 0.314 SIDE CHAIN 9 A ARG 16 0.319 SIDE CHAIN 9 A ARG 22 0.304 SIDE CHAIN 9 A ARG 30 0.316 SIDE CHAIN 10 A ARG 7 0.261 SIDE CHAIN 10 A ARG 16 0.321 SIDE CHAIN 10 A ARG 22 0.220 SIDE CHAIN 10 A ARG 30 0.300 SIDE CHAIN 10 A ARG 36 0.150 SIDE CHAIN 11 A ARG 7 0.293 SIDE CHAIN 11 A ARG 16 0.307 SIDE CHAIN 11 A ARG 22 0.313 SIDE CHAIN 11 A ARG 30 0.316 SIDE CHAIN 11 A ARG 36 0.320 SIDE CHAIN 12 A ARG 7 0.299 SIDE CHAIN 12 A ARG 16 0.316 SIDE CHAIN 12 A ARG 22 0.241 SIDE CHAIN 12 A ARG 30 0.313 SIDE CHAIN 12 A ARG 36 0.318 SIDE CHAIN 13 A ARG 7 0.317 SIDE CHAIN 13 A ARG 16 0.313 SIDE CHAIN 13 A ARG 22 0.315 SIDE CHAIN 13 A ARG 30 0.317 SIDE CHAIN 13 A ARG 36 0.304 SIDE CHAIN 14 A ARG 7 0.275 SIDE CHAIN 14 A ARG 16 0.320 SIDE CHAIN 14 A ARG 22 0.313 SIDE CHAIN 14 A ARG 30 0.307 SIDE CHAIN 15 A ARG 7 0.314 SIDE CHAIN 15 A ARG 16 0.307 SIDE CHAIN 15 A ARG 22 0.319 SIDE CHAIN 15 A ARG 30 0.308 SIDE CHAIN 15 A ARG 36 0.143 SIDE CHAIN 16 A ARG 7 0.287 SIDE CHAIN 16 A ARG 16 0.320 SIDE CHAIN 16 A ARG 22 0.312 SIDE CHAIN 16 A ARG 30 0.319 SIDE CHAIN 16 A ARG 36 0.314 SIDE CHAIN 17 A ARG 7 0.298 SIDE CHAIN 17 A ARG 16 0.318 SIDE CHAIN 17 A ARG 22 0.308 SIDE CHAIN 17 A ARG 30 0.239 SIDE CHAIN 17 A ARG 36 0.178 SIDE CHAIN 18 A ARG 7 0.279 SIDE CHAIN 18 A ARG 16 0.316 SIDE CHAIN 18 A ARG 22 0.252 SIDE CHAIN 18 A ARG 30 0.316 SIDE CHAIN 18 A ARG 36 0.272 SIDE CHAIN 19 A ARG 7 0.297 SIDE CHAIN 19 A ARG 16 0.316 SIDE CHAIN 19 A ARG 22 0.275 SIDE CHAIN 19 A ARG 30 0.308 SIDE CHAIN 19 A ARG 36 0.318 SIDE CHAIN 20 A ARG 7 0.317 SIDE CHAIN 20 A ARG 16 0.261 SIDE CHAIN 20 A ARG 22 0.271 SIDE CHAIN 20 A ARG 30 0.317 SIDE CHAIN 20 A ARG 36 0.279 SIDE CHAIN 1 A LEU 3 66.82 -79.33 1 A SER 4 63.75 -167.62 1 A ILE 15 61.84 -93.56 2 A CYS 5 73.07 -62.44 2 A ILE 15 53.49 -126.75 3 A ILE 15 51.05 -136.82 3 A MET 21 63.18 77.04 4 A PRO 2 -77.35 -167.42 4 A ILE 15 51.37 -129.79 5 A ILE 15 61.46 -94.03 5 A MET 21 58.89 84.44 6 A ILE 15 58.85 -93.51 6 A MET 21 60.84 65.19 7 A ILE 15 60.48 -92.98 8 A SER 4 -91.40 43.54 8 A CYS 5 -149.45 44.42 8 A ILE 15 61.89 -92.90 8 A MET 21 62.64 63.71 9 A ILE 15 54.92 -116.78 10 A ILE 15 54.84 -121.84 11 A CYS 5 -97.40 40.18 11 A ILE 15 61.49 -99.10 12 A LEU 3 54.35 70.77 12 A PRO 14 -80.32 31.20 12 A ILE 15 -146.23 -153.95 12 A ILE 24 -148.38 44.49 13 A CYS 5 -104.75 45.60 13 A ILE 15 61.29 -101.80 14 A CYS 5 -97.43 49.18 14 A ILE 15 61.42 -94.96 14 A MET 21 61.85 65.70 15 A PRO 14 -79.65 38.26 15 A ILE 15 -157.31 -83.68 16 A ILE 15 54.21 -119.22 17 A ILE 15 63.02 -95.21 17 A ILE 24 -145.33 42.16 18 A LEU 3 70.69 132.61 18 A ILE 15 59.68 -98.49 18 A PRO 18 -78.53 -165.13 18 A ILE 24 -142.03 49.29 19 A SER 4 57.46 -171.03 19 A ILE 15 56.88 -107.38 20 A ARG 7 -69.45 89.81 20 A ILE 15 53.75 -120.59 20 A MET 21 61.68 86.19 SOLUTION STRUCTURE OF BOVINE NEUTROPHIL BETA-DEFENSIN 12: THE PEPTIDE FOLD OF THE BETA-DEFENSINS IS IDENTICAL TO THAT OF THE CLASSICAL DEFENSINS 1 Y N disulf 2.019 A CYS 5 A SG CYS 5 1_555 A CYS 34 A SG CYS 34 1_555 disulf 2.020 A CYS 12 A SG CYS 12 1_555 A CYS 27 A SG CYS 27 1_555 disulf 2.019 A CYS 17 A SG CYS 17 1_555 A CYS 35 A SG CYS 35 1_555 BETA-DEFENSIN 12 BETA-DEFENSIN 12 A VAL 19 A VAL 19 1 A PRO 20 A PRO 20 -0.16 A VAL 19 A VAL 19 2 A PRO 20 A PRO 20 -0.22 A VAL 19 A VAL 19 3 A PRO 20 A PRO 20 -0.30 A VAL 19 A VAL 19 4 A PRO 20 A PRO 20 -0.05 A VAL 19 A VAL 19 5 A PRO 20 A PRO 20 0.05 A VAL 19 A VAL 19 6 A PRO 20 A PRO 20 0.06 A VAL 19 A VAL 19 7 A PRO 20 A PRO 20 0.02 A VAL 19 A VAL 19 8 A PRO 20 A PRO 20 -0.42 A VAL 19 A VAL 19 9 A PRO 20 A PRO 20 -0.22 A VAL 19 A VAL 19 10 A PRO 20 A PRO 20 -0.31 A VAL 19 A VAL 19 11 A PRO 20 A PRO 20 0.14 A VAL 19 A VAL 19 12 A PRO 20 A PRO 20 -0.15 A VAL 19 A VAL 19 13 A PRO 20 A PRO 20 -0.05 A VAL 19 A VAL 19 14 A PRO 20 A PRO 20 0.10 A VAL 19 A VAL 19 15 A PRO 20 A PRO 20 0.04 A VAL 19 A VAL 19 16 A PRO 20 A PRO 20 -0.23 A VAL 19 A VAL 19 17 A PRO 20 A PRO 20 0.01 A VAL 19 A VAL 19 18 A PRO 20 A PRO 20 -1.20 A VAL 19 A VAL 19 19 A PRO 20 A PRO 20 0.08 A VAL 19 A VAL 19 20 A PRO 20 A PRO 20 -0.08 BD12_BOVIN UNP 1 1 P46170 GPLSCGRNGGVCIPIRCPVPMRQIGTCFGRPVKCCRSW 2 38 1BNB 2 38 P46170 A 1 2 38 3 anti-parallel anti-parallel A GLY 10 A GLY 10 A ILE 13 A ILE 13 A VAL 32 A VAL 32 A ARG 36 A ARG 36 A ARG 22 A ARG 22 A CYS 27 A CYS 27 1 P 1