1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Aizawa, T.
Fujitani, N.
Hayakawa, Y.
Ohnishi, A.
Ohkubo, T.
Kwano, K.
Hikichi, K.
Nitta, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
C
N
143
N
C
N
144
N
C
N
145
N
N
N
146
N
O
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
N
C
N
167
N
C
N
168
N
S
N
169
N
C
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
N
N
183
S
C
N
184
N
C
N
185
N
O
N
186
N
C
Y
187
N
C
Y
188
N
C
Y
189
N
C
Y
190
N
C
Y
191
N
C
Y
192
N
C
N
193
N
O
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
O
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
N
N
223
S
C
N
224
N
C
N
225
N
O
N
226
N
C
N
227
N
O
N
228
N
O
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
R
C
N
241
N
O
N
242
N
C
N
243
N
O
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
N
N
254
S
C
N
255
N
C
N
256
N
O
N
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
Y
261
N
C
Y
262
N
C
Y
263
N
C
N
264
N
O
N
265
N
O
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
N
N
278
S
C
N
279
N
C
N
280
N
O
N
281
N
C
N
282
N
C
N
283
N
C
N
284
N
O
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
doub
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
Y
183
N
doub
Y
184
N
sing
Y
185
N
sing
N
186
N
sing
Y
187
N
doub
N
188
N
sing
Y
189
N
doub
N
190
N
sing
Y
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
doub
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
doub
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
doub
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
Y
252
N
doub
Y
253
N
sing
Y
254
N
sing
N
255
N
sing
Y
256
N
doub
N
257
N
sing
Y
258
N
doub
N
259
N
sing
Y
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
doub
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
Rockville Pike, Bethesda, Md USA
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
274
1887
1890
10.1074/jbc.274.4.1887
9890941
Solution structure of an insect growth factor, growth-blocking peptide.
1999
10.2210/pdb1bqf/pdb
pdb_00001bqf
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Chemically synthesized
2788.123
PROTEIN (GROWTH-BLOCKING PEPTIDE)
1
nat
polymer
no
no
ENFSGGCVAGYMRTPDGRCKPTFYQ
ENFSGGCVAGYMRTPDGRCKPTFYQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
CHEMICALLY SYNTHESIZED
Apanteles
sample
7404
BRAIN
Apanteles kariyai
FAT BODY
HEMOLYMPH
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Data collection
1
0
1998-12-09
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-16
1
4
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
BNL
Y
RCSB
1998-08-09
REL
THE STRUCTURE WAS DETERMINED USING TWO DIMENSIONAL 1H NMR SPECTROSCOPY.
LEAST RESTRAINT VIOLATION AND LOWEST TOTAL ENERGY
100
16
COSY
TOCSY
NOESY
4.4
1
atm
303
K
DISTANCE GEOMETRY AND SIMULATED ANNEALING (DGSA PROTOCOL IN X-PLOR 3.1 MANUAL,
AXEL T. BRUNGER)
DISTANCE GEOMETRY AND SIMULATED ANNEALING
BRUNGER
refinement
X-PLOR3.1
structure solution
X-PLOR
500
JEOL
JNM-ALPHA 500
GLU
1
n
1
GLU
1
A
ASN
2
n
2
ASN
2
A
PHE
3
n
3
PHE
3
A
SER
4
n
4
SER
4
A
GLY
5
n
5
GLY
5
A
GLY
6
n
6
GLY
6
A
CYS
7
n
7
CYS
7
A
VAL
8
n
8
VAL
8
A
ALA
9
n
9
ALA
9
A
GLY
10
n
10
GLY
10
A
TYR
11
n
11
TYR
11
A
MET
12
n
12
MET
12
A
ARG
13
n
13
ARG
13
A
THR
14
n
14
THR
14
A
PRO
15
n
15
PRO
15
A
ASP
16
n
16
ASP
16
A
GLY
17
n
17
GLY
17
A
ARG
18
n
18
ARG
18
A
CYS
19
n
19
CYS
19
A
LYS
20
n
20
LYS
20
A
PRO
21
n
21
PRO
21
A
THR
22
n
22
THR
22
A
PHE
23
n
23
PHE
23
A
TYR
24
n
24
TYR
24
A
GLN
25
n
25
GLN
25
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
MET
12
A
O
MET
12
A
N
LYS
20
A
N
LYS
20
1
A
ARG
13
0.243
SIDE CHAIN
1
A
ARG
18
0.288
SIDE CHAIN
2
A
ARG
13
0.316
SIDE CHAIN
2
A
ARG
18
0.274
SIDE CHAIN
3
A
ARG
13
0.213
SIDE CHAIN
3
A
ARG
18
0.312
SIDE CHAIN
4
A
ARG
13
0.290
SIDE CHAIN
4
A
ARG
18
0.184
SIDE CHAIN
5
A
ARG
13
0.318
SIDE CHAIN
5
A
ARG
18
0.290
SIDE CHAIN
6
A
ARG
13
0.270
SIDE CHAIN
6
A
ARG
18
0.275
SIDE CHAIN
7
A
ARG
13
0.311
SIDE CHAIN
7
A
ARG
18
0.158
SIDE CHAIN
8
A
ARG
13
0.224
SIDE CHAIN
8
A
ARG
18
0.317
SIDE CHAIN
9
A
ARG
13
0.305
SIDE CHAIN
9
A
ARG
18
0.128
SIDE CHAIN
10
A
ARG
13
0.297
SIDE CHAIN
10
A
ARG
18
0.218
SIDE CHAIN
11
A
ARG
18
0.233
SIDE CHAIN
12
A
ARG
13
0.236
SIDE CHAIN
12
A
ARG
18
0.313
SIDE CHAIN
13
A
ARG
13
0.087
SIDE CHAIN
14
A
ARG
13
0.294
SIDE CHAIN
14
A
ARG
18
0.286
SIDE CHAIN
15
A
ARG
13
0.316
SIDE CHAIN
15
A
ARG
18
0.318
SIDE CHAIN
16
A
ARG
13
0.270
SIDE CHAIN
16
A
ARG
18
0.106
SIDE CHAIN
1
A
SER
4
-74.68
-150.92
1
A
THR
22
-118.08
67.78
1
A
PHE
23
-99.15
47.51
2
A
CYS
7
-99.07
-151.05
2
A
MET
12
-44.39
165.05
3
A
ASN
2
177.22
151.65
3
A
PHE
3
65.10
112.82
3
A
CYS
7
-94.00
-71.78
4
A
SER
4
-98.10
36.82
4
A
VAL
8
-48.54
170.89
4
A
ARG
18
-110.85
-160.78
5
A
PHE
3
-166.64
96.91
5
A
CYS
7
-89.73
-92.22
5
A
ARG
18
163.56
-166.33
5
A
THR
22
-107.46
42.15
6
A
PHE
3
-87.89
-74.82
6
A
SER
4
176.90
-69.14
6
A
THR
22
-101.89
43.84
6
A
TYR
24
60.57
-178.63
7
A
SER
4
65.57
88.53
7
A
CYS
7
-93.90
-150.43
7
A
THR
22
-115.74
54.17
7
A
PHE
23
-116.24
51.62
7
A
TYR
24
-45.89
172.10
8
A
PHE
3
-107.17
-86.94
8
A
CYS
7
-131.66
-142.87
8
A
ASP
16
-53.60
-74.70
8
A
ARG
18
-173.53
143.76
8
A
PHE
23
-90.99
54.41
8
A
TYR
24
56.50
-93.06
9
A
MET
12
-51.64
106.09
10
A
ASN
2
-164.68
48.24
10
A
PHE
3
-45.08
-72.16
10
A
SER
4
-165.06
-72.21
10
A
THR
22
-140.50
53.77
11
A
ASN
2
61.90
-90.28
11
A
SER
4
50.52
-168.67
11
A
VAL
8
-43.93
165.05
12
A
PHE
3
58.56
70.50
12
A
MET
12
-43.84
153.00
12
A
ARG
18
-178.83
-171.55
12
A
THR
22
-97.38
54.61
13
A
PHE
23
-153.94
88.89
14
A
ASN
2
-111.37
78.11
14
A
SER
4
-137.76
-46.49
14
A
CYS
7
-94.28
-66.98
14
A
ARG
18
178.92
130.69
14
A
TYR
24
65.87
154.41
15
A
MET
12
-45.21
108.09
15
A
TYR
24
-103.21
-157.07
16
A
ASN
2
66.07
-174.83
16
A
PHE
3
-101.05
-60.16
16
A
CYS
7
-128.27
-73.17
GROWTH-BLOCKING PEPTIDE (GBP) FROM PSEUDALETIA SEPARATA
1
N
N
disulf
2.020
A
CYS
7
A
SG
CYS
7
1_555
A
CYS
19
A
SG
CYS
19
1_555
HORMONE/GROWTH FACTOR
GROWTH FACTOR, HORMONE-GROWTH FACTOR COMPLEX
GBP_PSESE
UNP
1
Q27913
1
25
1BQF
1
25
Q27913
A
1
1
25
2
anti-parallel
A
TYR
11
A
TYR
11
A
ARG
13
A
ARG
13
A
CYS
19
A
CYS
19
A
PRO
21
A
PRO
21
1
P 1