0.010660
0.000000
0.000000
0.000000
0.010660
0.000000
0.000000
0.000000
0.010660
0.00000
0.00000
0.00000
Weil, J.
Min, T.
Yang, C.
Wang, S.
Sutherland, C.
Sinha, N.
Kang, C.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
96
90.00
90.00
90.00
93.810
93.810
93.810
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
55
422
429
10.1107/S0907444998012529
10089350
Stabilization of the i-motif by intramolecular adenine-adenine-thymine base triple in the structure of d(ACCCT).
1999
10.2210/pdb1bqj/pdb
pdb_00001bqj
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
103.15
1
IMAGE PLATE
1997-11-01
RIGAKU RAXIS IIC
NI FILTER
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
1439.988
DNA (5'-D(*AP*CP*CP*CP*T)-3')
4
man
polymer
18.015
water
51
nat
water
no
no
(DA)(DC)(DC)(DC)(DT)
ACCCT
A,B,C,D
polydeoxyribonucleotide
n
n
n
n
n
12
-3.799
4
5
A
1
B
6
-106.411
A_DA1:DA6_B
1
11.162
3.982
0.264
1.076
8.401
2
15
A
2
B
7
-178.064
A_DC2:DC7_B
2
-13.773
-1.874
-0.123
-1.090
3.988
2
15
D
19
C
14
-176.420
D_DC19:DC14_C
3
0.730
-2.035
-0.029
-1.272
2.598
2
15
A
3
B
8
-179.644
A_DC3:DC8_B
4
0.166
-1.987
0.091
-1.166
-4.549
2
15
D
18
C
13
179.794
D_DC18:DC13_C
5
1.377
2.177
-0.039
1.372
-0.240
2
15
A
4
B
9
177.864
A_DC4:DC9_B
6
2.625
2.052
0.109
1.263
11.007
2
15
D
17
C
12
-176.088
D_DC17:DC12_C
7
-6.383
-1.992
-0.149
-1.158
12.341
1
20
B
10
D
16
3.230
B_DT10:DA16_D
8
2.091
-0.017
-0.058
-0.103
3.013
85.704
A
A
1
2
0.955
B
B
6
7
2.897
1.299
4.303
-2.652
AA_DA1DC2:DC7DA6_BB
1
3.711
-2.729
85.632
-1.976
-3.087
0.634
177.429
A
D
2
19
-60.979
B
C
7
14
0.575
-121.146
2.144
-2.773
AD_DC2DC19:DC14DC7_CB
2
-128.516
64.688
81.179
-1.196
-1.274
-0.396
176.872
D
A
19
3
-48.952
C
B
14
8
0.000
-96.386
-1.372
2.842
DA_DC19DC3:DC8DC14_BC
3
-148.276
75.305
13.352
1.325
0.834
-0.069
179.477
A
D
3
18
-65.817
B
C
8
13
-0.004
-131.578
2.155
2.272
AD_DC3DC18:DC13DC8_CB
4
120.171
-60.111
146.294
1.132
-1.081
0.230
-176.256
D
A
18
4
-49.246
C
B
13
9
0.018
96.768
1.451
-2.627
DA_DC18DC4:DC9DC13_BC
5
147.246
74.935
-20.106
1.257
0.813
0.066
-176.323
A
D
4
17
66.880
B
C
9
12
-0.095
-132.166
2.459
2.330
AD_DC4DC17:DC12DC9_CB
6
115.847
58.622
-60.157
-1.172
1.225
-3.277
143.428
D
B
17
10
2.873
C
D
12
16
-3.214
5.454
-1.628
-0.882
DB_DC17DT10:DA16DC12_DC
7
10.794
-5.685
143.216
-0.437
0.804
database_2
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Database references
Refinement description
1
0
1999-03-18
1
1
2008-05-22
1
2
2011-07-13
1
3
2023-08-02
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
NDB
Y
NDB
1998-08-17
REL
HOH
water
191D
PDB
experimental model
HOH
32
2
HOH
HOH
32
A
HOH
36
2
HOH
HOH
36
A
HOH
40
2
HOH
HOH
40
A
HOH
48
2
HOH
HOH
48
A
HOH
50
2
HOH
HOH
50
A
HOH
57
2
HOH
HOH
57
A
HOH
58
2
HOH
HOH
58
A
HOH
62
2
HOH
HOH
62
A
HOH
64
2
HOH
HOH
64
A
HOH
66
2
HOH
HOH
66
A
HOH
68
2
HOH
HOH
68
A
HOH
73
2
HOH
HOH
73
A
HOH
76
2
HOH
HOH
76
A
HOH
22
2
HOH
HOH
22
B
HOH
23
2
HOH
HOH
23
B
HOH
27
2
HOH
HOH
27
B
HOH
31
2
HOH
HOH
31
B
HOH
41
2
HOH
HOH
41
B
HOH
42
2
HOH
HOH
42
B
HOH
43
2
HOH
HOH
43
B
HOH
44
2
HOH
HOH
44
B
HOH
49
2
HOH
HOH
49
B
HOH
51
2
HOH
HOH
51
B
HOH
54
2
HOH
HOH
54
B
HOH
55
2
HOH
HOH
55
B
HOH
56
2
HOH
HOH
56
B
HOH
69
2
HOH
HOH
69
B
HOH
70
2
HOH
HOH
70
B
HOH
71
2
HOH
HOH
71
B
HOH
80
2
HOH
HOH
80
B
HOH
82
2
HOH
HOH
82
B
HOH
21
2
HOH
HOH
21
C
HOH
25
2
HOH
HOH
25
C
HOH
28
2
HOH
HOH
28
C
HOH
30
2
HOH
HOH
30
C
HOH
37
2
HOH
HOH
37
C
HOH
38
2
HOH
HOH
38
C
HOH
39
2
HOH
HOH
39
C
HOH
46
2
HOH
HOH
46
C
HOH
47
2
HOH
HOH
47
C
HOH
53
2
HOH
HOH
53
C
HOH
74
2
HOH
HOH
74
C
HOH
77
2
HOH
HOH
77
C
HOH
79
2
HOH
HOH
79
C
HOH
26
2
HOH
HOH
26
D
HOH
33
2
HOH
HOH
33
D
HOH
45
2
HOH
HOH
45
D
HOH
63
2
HOH
HOH
63
D
HOH
67
2
HOH
HOH
67
D
HOH
72
2
HOH
HOH
72
D
HOH
81
2
HOH
HOH
81
D
A
1
n
1
DA
1
A
C
2
n
2
DC
2
A
C
3
n
3
DC
3
A
C
4
n
4
DC
4
A
n
5
5
A
A
6
n
1
DA
6
B
C
7
n
2
DC
7
B
C
8
n
3
DC
8
B
C
9
n
4
DC
9
B
T
10
n
5
DT
10
B
A
11
n
1
DA
11
C
C
12
n
2
DC
12
C
C
13
n
3
DC
13
C
C
14
n
4
DC
14
C
T
15
n
5
DT
15
C
A
16
n
1
DA
16
D
C
17
n
2
DC
17
D
C
18
n
3
DC
18
D
C
19
n
4
DC
19
D
T
20
n
5
DT
20
D
author_defined_assembly
4
tetrameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
DT
5
A
DT
5
1
Y
0.2350000
0.1920000
0.1920000
2.200
15.000
689
6914
6914
10.000
98.500
RANDOM
1000000.000
0.0010
1
ISOTROPIC
THROUGHOUT
2.000
MOLECULAR REPLACEMENT
191D
8.00
2.200
15.000
51
411
0
360
0
0.004
0.57
23.6
1.07
2.200
15.000
1BQJ
7136
2.000
0.0350000
1
4.500
98.500
2.200
2.300
96.30
model building
X-PLOR
refinement
X-PLOR
3.851
data reduction
DENZO
data scaling
SCALEPACK
phasing
X-PLOR
CRYSTAL STRUCTURE OF D(ACCCT)
1
N
N
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
hydrog
TYPE_5_PAIR
A
DA
1
A
N1
DA
1
1_555
B
DA
6
B
N6
DA
1
1_555
hydrog
TYPE_5_PAIR
A
DA
1
A
N6
DA
1
1_555
B
DA
6
B
N7
DA
1
1_555
hydrog
REVERSED HOOGSTEEN
A
DA
1
A
N6
DA
1
1_555
C
DT
15
C
O2
DT
5
1_555
hydrog
REVERSED HOOGSTEEN
A
DA
1
A
N7
DA
1
1_555
C
DT
15
C
N3
DT
5
1_555
hydrog
TYPE_15_PAIR
A
DC
2
A
N4
DC
2
1_555
B
DC
7
B
O2
DC
2
1_555
hydrog
TYPE_15_PAIR
A
DC
2
A
O2
DC
2
1_555
B
DC
7
B
N4
DC
2
1_555
hydrog
TYPE_15_PAIR
A
DC
3
A
N4
DC
3
1_555
B
DC
8
B
O2
DC
3
1_555
hydrog
TYPE_15_PAIR
A
DC
3
A
O2
DC
3
1_555
B
DC
8
B
N4
DC
3
1_555
hydrog
TYPE_15_PAIR
A
DC
4
A
N4
DC
4
1_555
B
DC
9
B
O2
DC
4
1_555
hydrog
TYPE_15_PAIR
A
DC
4
A
O2
DC
4
1_555
B
DC
9
B
N4
DC
4
1_555
hydrog
WATSON-CRICK
B
DT
10
B
N3
DT
5
1_555
D
DA
16
D
N1
DA
1
1_555
hydrog
WATSON-CRICK
B
DT
10
B
O4
DT
5
1_555
D
DA
16
D
N6
DA
1
1_555
hydrog
TYPE_15_PAIR
C
DC
12
C
N4
DC
2
1_555
D
DC
17
D
O2
DC
2
1_555
hydrog
TYPE_15_PAIR
C
DC
12
C
O2
DC
2
1_555
D
DC
17
D
N4
DC
2
1_555
hydrog
TYPE_15_PAIR
C
DC
13
C
N4
DC
3
1_555
D
DC
18
D
O2
DC
3
1_555
hydrog
TYPE_15_PAIR
C
DC
13
C
O2
DC
3
1_555
D
DC
18
D
N4
DC
3
1_555
hydrog
TYPE_15_PAIR
C
DC
14
C
N4
DC
4
1_555
D
DC
19
D
O2
DC
4
1_555
hydrog
TYPE_15_PAIR
C
DC
14
C
O2
DC
4
1_555
D
DC
19
D
N4
DC
4
1_555
DNA
HUMAN TELOMERIC FRAGMENT, DNA
1BQJ
PDB
1
1BQJ
1
5
1BQJ
1
5
1BQJ
A
1
1
5
6
10
1BQJ
6
10
1BQJ
B
1
1
5
11
15
1BQJ
11
15
1BQJ
C
1
1
5
16
20
1BQJ
16
20
1BQJ
D
1
1
5
197
cubic
I 2 3