0.009597 0.005541 0.000000 0.000000 0.011082 0.000000 0.000000 0.000000 0.013423 0.00000 0.00000 0.00000 DISORDERED AREAS: RESIDUES 1 - 3, 64 - 67, AND C TERMINAL PORTION (RESIDUES 175 - 182) CANNOT BE SEEN IN THE MAP. Zanotti, G. Monaco, H.L. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 9 90.00 90.00 120.00 104.200 104.200 74.500 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 230 613 624 10.1006/jmbi.1993.1173 8464067 Crystal structure of the trigonal form of human plasma retinol-binding protein at 2.5 A resolution. 1993 UK J.Mol.Biol. JMOBAK 0070 0022-2836 178 477 Crystallization of Human Plasma Apo-Retinol-Binding Protein 1984 UK J.Mol.Biol. JMOBAK 0070 0022-2836 163 679 Crystallization and Preliminary X-Ray Data of Human Plasma Retinol-Binding Protein 1983 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 x-ray 1 1.0 20984.445 RETINOL BINDING PROTEIN 1 man polymer 18.015 water 55 nat water no no ERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCADMVGTFTDT EDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELC LARQYRLIVHNGYCDGRSERNL ERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCADMVGTFTDT EDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELC LARQYRLIVHNGYCDGRSERNL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample 9606 Homo sapiens 3.71 66.83 pdbx_database_status struct_conf struct_conf_type repository Initial release Version format compliance Version format compliance Derived calculations Other 1 0 1994-01-31 1 1 2008-03-24 1 2 2011-07-13 1 3 2017-11-29 _pdbx_database_status.process_site SHEET THE SHEET PRESENTED AS *S1* ON SHEET RECORDS BELOW IS ACTUALLY AN EIGHT-STRANDED BETA-BARREL. THIS IS REPRESENTED BY A NINE-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL. Y BNL 1992-07-27 REL HOH water HOH 176 2 HOH HOH 183 A HOH 177 2 HOH HOH 184 A HOH 178 2 HOH HOH 185 A HOH 179 2 HOH HOH 186 A HOH 180 2 HOH HOH 187 A HOH 181 2 HOH HOH 188 A HOH 182 2 HOH HOH 189 A HOH 183 2 HOH HOH 190 A HOH 184 2 HOH HOH 191 A HOH 185 2 HOH HOH 192 A HOH 186 2 HOH HOH 193 A HOH 187 2 HOH HOH 194 A HOH 188 2 HOH HOH 195 A HOH 189 2 HOH HOH 196 A HOH 190 2 HOH HOH 197 A HOH 191 2 HOH HOH 198 A HOH 192 2 HOH HOH 199 A HOH 193 2 HOH HOH 200 A HOH 194 2 HOH HOH 201 A HOH 195 2 HOH HOH 202 A HOH 196 2 HOH HOH 203 A HOH 197 2 HOH HOH 204 A HOH 198 2 HOH HOH 205 A HOH 199 2 HOH HOH 206 A HOH 200 2 HOH HOH 207 A HOH 201 2 HOH HOH 208 A HOH 202 2 HOH HOH 209 A HOH 203 2 HOH HOH 210 A HOH 204 2 HOH HOH 211 A HOH 205 2 HOH HOH 212 A HOH 206 2 HOH HOH 213 A HOH 207 2 HOH HOH 214 A HOH 208 2 HOH HOH 215 A HOH 209 2 HOH HOH 216 A HOH 210 2 HOH HOH 217 A HOH 211 2 HOH HOH 218 A HOH 212 2 HOH HOH 219 A HOH 213 2 HOH HOH 220 A HOH 214 2 HOH HOH 221 A HOH 215 2 HOH HOH 222 A HOH 216 2 HOH HOH 223 A HOH 217 2 HOH HOH 224 A HOH 218 2 HOH HOH 225 A HOH 219 2 HOH HOH 226 A HOH 220 2 HOH HOH 227 A HOH 221 2 HOH HOH 228 A HOH 222 2 HOH HOH 229 A HOH 223 2 HOH HOH 230 A HOH 224 2 HOH HOH 231 A HOH 225 2 HOH HOH 232 A HOH 226 2 HOH HOH 233 A HOH 227 2 HOH HOH 234 A HOH 228 2 HOH HOH 235 A HOH 229 2 HOH HOH 236 A HOH 230 2 HOH HOH 237 A GLU 1 n 1 GLU 1 A ARG 2 n 2 ARG 2 A ASP 3 n 3 ASP 3 A CYS 4 n 4 CYS 4 A ARG 5 n 5 ARG 5 A VAL 6 n 6 VAL 6 A SER 7 n 7 SER 7 A SER 8 n 8 SER 8 A PHE 9 n 9 PHE 9 A ARG 10 n 10 ARG 10 A VAL 11 n 11 VAL 11 A LYS 12 n 12 LYS 12 A GLU 13 n 13 GLU 13 A ASN 14 n 14 ASN 14 A PHE 15 n 15 PHE 15 A ASP 16 n 16 ASP 16 A LYS 17 n 17 LYS 17 A ALA 18 n 18 ALA 18 A ARG 19 n 19 ARG 19 A PHE 20 n 20 PHE 20 A SER 21 n 21 SER 21 A GLY 22 n 22 GLY 22 A THR 23 n 23 THR 23 A TRP 24 n 24 TRP 24 A TYR 25 n 25 TYR 25 A ALA 26 n 26 ALA 26 A MET 27 n 27 MET 27 A ALA 28 n 28 ALA 28 A LYS 29 n 29 LYS 29 A LYS 30 n 30 LYS 30 A ASP 31 n 31 ASP 31 A PRO 32 n 32 PRO 32 A GLU 33 n 33 GLU 33 A GLY 34 n 34 GLY 34 A LEU 35 n 35 LEU 35 A PHE 36 n 36 PHE 36 A LEU 37 n 37 LEU 37 A GLN 38 n 38 GLN 38 A ASP 39 n 39 ASP 39 A ASN 40 n 40 ASN 40 A ILE 41 n 41 ILE 41 A VAL 42 n 42 VAL 42 A ALA 43 n 43 ALA 43 A GLU 44 n 44 GLU 44 A PHE 45 n 45 PHE 45 A SER 46 n 46 SER 46 A VAL 47 n 47 VAL 47 A ASP 48 n 48 ASP 48 A GLU 49 n 49 GLU 49 A THR 50 n 50 THR 50 A GLY 51 n 51 GLY 51 A GLN 52 n 52 GLN 52 A MET 53 n 53 MET 53 A SER 54 n 54 SER 54 A ALA 55 n 55 ALA 55 A THR 56 n 56 THR 56 A ALA 57 n 57 ALA 57 A LYS 58 n 58 LYS 58 A GLY 59 n 59 GLY 59 A ARG 60 n 60 ARG 60 A VAL 61 n 61 VAL 61 A ARG 62 n 62 ARG 62 A LEU 63 n 63 LEU 63 A LEU 64 n 64 LEU 64 A ASN 65 n 65 ASN 65 A ASN 66 n 66 ASN 66 A TRP 67 n 67 TRP 67 A ASP 68 n 68 ASP 68 A VAL 69 n 69 VAL 69 A CYS 70 n 70 CYS 70 A ALA 71 n 71 ALA 71 A ASP 72 n 72 ASP 72 A MET 73 n 73 MET 73 A VAL 74 n 74 VAL 74 A GLY 75 n 75 GLY 75 A THR 76 n 76 THR 76 A PHE 77 n 77 PHE 77 A THR 78 n 78 THR 78 A ASP 79 n 79 ASP 79 A THR 80 n 80 THR 80 A GLU 81 n 81 GLU 81 A ASP 82 n 82 ASP 82 A PRO 83 n 83 PRO 83 A ALA 84 n 84 ALA 84 A LYS 85 n 85 LYS 85 A PHE 86 n 86 PHE 86 A LYS 87 n 87 LYS 87 A MET 88 n 88 MET 88 A LYS 89 n 89 LYS 89 A TYR 90 n 90 TYR 90 A TRP 91 n 91 TRP 91 A GLY 92 n 92 GLY 92 A VAL 93 n 93 VAL 93 A ALA 94 n 94 ALA 94 A SER 95 n 95 SER 95 A PHE 96 n 96 PHE 96 A LEU 97 n 97 LEU 97 A GLN 98 n 98 GLN 98 A LYS 99 n 99 LYS 99 A GLY 100 n 100 GLY 100 A ASN 101 n 101 ASN 101 A ASP 102 n 102 ASP 102 A ASP 103 n 103 ASP 103 A HIS 104 n 104 HIS 104 A TRP 105 n 105 TRP 105 A ILE 106 n 106 ILE 106 A VAL 107 n 107 VAL 107 A ASP 108 n 108 ASP 108 A THR 109 n 109 THR 109 A ASP 110 n 110 ASP 110 A TYR 111 n 111 TYR 111 A ASP 112 n 112 ASP 112 A THR 113 n 113 THR 113 A TYR 114 n 114 TYR 114 A ALA 115 n 115 ALA 115 A VAL 116 n 116 VAL 116 A GLN 117 n 117 GLN 117 A TYR 118 n 118 TYR 118 A SER 119 n 119 SER 119 A CYS 120 n 120 CYS 120 A ARG 121 n 121 ARG 121 A LEU 122 n 122 LEU 122 A LEU 123 n 123 LEU 123 A ASN 124 n 124 ASN 124 A LEU 125 n 125 LEU 125 A ASP 126 n 126 ASP 126 A GLY 127 n 127 GLY 127 A THR 128 n 128 THR 128 A CYS 129 n 129 CYS 129 A ALA 130 n 130 ALA 130 A ASP 131 n 131 ASP 131 A SER 132 n 132 SER 132 A TYR 133 n 133 TYR 133 A SER 134 n 134 SER 134 A PHE 135 n 135 PHE 135 A VAL 136 n 136 VAL 136 A PHE 137 n 137 PHE 137 A SER 138 n 138 SER 138 A ARG 139 n 139 ARG 139 A ASP 140 n 140 ASP 140 A PRO 141 n 141 PRO 141 A ASN 142 n 142 ASN 142 A GLY 143 n 143 GLY 143 A LEU 144 n 144 LEU 144 A PRO 145 n 145 PRO 145 A PRO 146 n 146 PRO 146 A GLU 147 n 147 GLU 147 A ALA 148 n 148 ALA 148 A GLN 149 n 149 GLN 149 A LYS 150 n 150 LYS 150 A ILE 151 n 151 ILE 151 A VAL 152 n 152 VAL 152 A ARG 153 n 153 ARG 153 A GLN 154 n 154 GLN 154 A ARG 155 n 155 ARG 155 A GLN 156 n 156 GLN 156 A GLU 157 n 157 GLU 157 A GLU 158 n 158 GLU 158 A LEU 159 n 159 LEU 159 A CYS 160 n 160 CYS 160 A LEU 161 n 161 LEU 161 A ALA 162 n 162 ALA 162 A ARG 163 n 163 ARG 163 A GLN 164 n 164 GLN 164 A TYR 165 n 165 TYR 165 A ARG 166 n 166 ARG 166 A LEU 167 n 167 LEU 167 A ILE 168 n 168 ILE 168 A VAL 169 n 169 VAL 169 A HIS 170 n 170 HIS 170 A ASN 171 n 171 ASN 171 A GLY 172 n 172 GLY 172 A TYR 173 n 173 TYR 173 A CYS 174 n 174 CYS 174 A ASP 175 n 175 ASP 175 A n 176 176 A n 177 177 A n 178 178 A n 179 179 A n 180 180 A n 181 181 A n 182 182 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ALA 26 A N ALA 26 A O ILE 41 A O ILE 41 A N ASP 48 A N ASP 48 A O GLN 52 A O GLN 52 A N LEU 63 A N LEU 63 A O TRP 67 A O TRP 67 A O THR 78 A O THR 78 A N LYS 87 A N LYS 87 A O TYR 90 A O TYR 90 A N GLY 100 A N GLY 100 A O LEU 122 A O LEU 122 A N ALA 130 A N ALA 130 A O SER 138 A O SER 138 A N TYR 25 A N TYR 25 1 A CA ASP 175 A CA ASP 175 1 Y 1 A C ASP 175 A C ASP 175 1 Y 1 A O ASP 175 A O ASP 175 1 Y 1 A CB ASP 175 A CB ASP 175 1 Y 1 A CG ASP 175 A CG ASP 175 1 Y 1 A OD1 ASP 175 A OD1 ASP 175 1 Y 1 A OD2 ASP 175 A OD2 ASP 175 1 Y 1 A GLY 176 A GLY 176 1 Y 1 A ARG 177 A ARG 177 1 Y 1 A SER 178 A SER 178 1 Y 1 A GLU 179 A GLU 179 1 Y 1 A ARG 180 A ARG 180 1 Y 1 A ASN 181 A ASN 181 1 Y 1 A LEU 182 A LEU 182 1 Y 1 A CA ARG 155 PLANAR 1 -5.76 0.90 118.30 112.54 A A A CB CG OD2 ASP ASP ASP 3 3 3 N 1 -5.01 0.50 120.30 115.29 A A A NE CZ NH1 ARG ARG ARG 5 5 5 N 1 3.21 0.50 120.30 123.51 A A A NE CZ NH2 ARG ARG ARG 5 5 5 N 1 -5.87 0.90 118.30 112.43 A A A CB CG OD1 ASP ASP ASP 31 31 31 N 1 6.25 0.90 118.30 124.55 A A A CB CG OD2 ASP ASP ASP 31 31 31 N 1 -5.51 0.90 118.30 112.79 A A A CB CG OD1 ASP ASP ASP 48 48 48 N 1 5.53 0.90 118.30 123.83 A A A CB CG OD2 ASP ASP ASP 48 48 48 N 1 -5.92 0.90 118.30 112.38 A A A CB CG OD2 ASP ASP ASP 68 68 68 N 1 -6.05 0.90 118.30 112.25 A A A CB CG OD2 ASP ASP ASP 72 72 72 N 1 -5.63 0.90 118.30 112.67 A A A CB CG OD1 ASP ASP ASP 79 79 79 N 1 -5.57 0.90 118.30 112.73 A A A CB CG OD1 ASP ASP ASP 103 103 103 N 1 6.39 0.90 118.30 124.69 A A A CB CG OD1 ASP ASP ASP 126 126 126 N 1 -6.14 0.90 118.30 112.16 A A A CB CG OD2 ASP ASP ASP 126 126 126 N 1 -6.24 0.90 118.30 112.06 A A A CB CG OD1 ASP ASP ASP 131 131 131 N 1 6.06 0.90 118.30 124.36 A A A CB CG OD2 ASP ASP ASP 131 131 131 N 1 11.06 1.40 123.60 134.66 A A A CD NE CZ ARG ARG ARG 139 139 139 N 1 3.07 0.50 120.30 123.37 A A A NE CZ NH1 ARG ARG ARG 139 139 139 N 1 -3.72 0.50 120.30 116.58 A A A NE CZ NH2 ARG ARG ARG 139 139 139 N 1 10.82 1.80 110.60 121.42 A A A N CA CB ARG ARG ARG 155 155 155 N 1 A A CD OE2 GLU GLU 81 81 0.077 0.011 1.252 1.329 N 1 A A CD OE2 GLU GLU 147 147 0.078 0.011 1.252 1.330 N 1 A SER 7 -50.34 -5.17 1 A SER 21 -36.54 155.31 1 A LEU 37 68.52 92.41 1 A THR 50 -176.75 -41.81 1 A LYS 58 -170.23 133.96 1 A LEU 63 -65.83 -175.70 1 A ASN 66 83.42 104.77 1 A TRP 67 176.48 99.44 1 A ASP 79 -48.30 178.82 1 A SER 95 -46.21 -15.46 1 A ASP 108 -171.22 147.97 1 A TYR 111 72.58 -33.87 1 A THR 113 -129.74 -52.56 1 A ASP 131 -170.51 97.42 1 A PRO 141 -64.96 13.82 1 A GLN 164 -143.13 -14.67 1 A TYR 173 -48.15 -73.16 1 A CYS 174 -42.03 96.76 0.19 0.19 2.5 9614 1 2.5 55 1463 0 0 1408 0.007 2.7 model building X-PLOR refinement X-PLOR phasing X-PLOR RETINOL BINDING PROTEIN (APO FORM) CRYSTAL STRUCTURE OF THE TRIGONAL FORM OF HUMAN PLASMA RETINOL-BINDING PROTEIN AT 2.5 ANGSTROMS RESOLUTION 1 N N 2 N N A VAL 6 A VAL 6 HELX_P ONE SHORT TURN A SER 8 A SER 8 4 1 3 A PRO 146 A PRO 146 HELX_P A GLU 158 A GLU 158 1 2 13 disulf 2.027 A CYS 4 A SG CYS 4 1_555 A CYS 160 A SG CYS 160 1_555 disulf 2.038 A CYS 70 A SG CYS 70 1_555 A CYS 174 A SG CYS 174 1_555 disulf 1.978 A CYS 120 A SG CYS 120 1_555 A CYS 129 A SG CYS 129 1_555 RETINOL TRANSPORT RETINOL TRANSPORT RETBP_HUMAN UNP 1 1 P02753 MKWVWALLLLAAWAAAERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGRVRLL NNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTYAVQYSCRLLNLDGTCADSYSFVFSRDPNGL PPEAQKIVRQRQEELCLARQYRLIVHNGYCDGRSERNLL 17 198 1BRQ 1 182 P02753 A 1 1 182 9 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLY 22 A GLY 22 A LYS 30 A LYS 30 A ASP 39 A ASP 39 A ASP 48 A ASP 48 A GLN 52 A GLN 52 A LEU 63 A LEU 63 A TRP 67 A TRP 67 A THR 78 A THR 78 A LYS 85 A LYS 85 A GLY 92 A GLY 92 A LYS 99 A LYS 99 A THR 109 A THR 109 A TYR 114 A TYR 114 A ASN 124 A ASN 124 A CYS 129 A CYS 129 A ARG 139 A ARG 139 A GLY 22 A GLY 22 A LYS 30 A LYS 30 146 H 3