0.010084 0.005822 0.000000 0.000000 0.011644 0.000000 0.000000 0.000000 0.009029 0.00000 0.00000 0.00000 Hao, B. Gong, W. Rajagopalan, P.T. Hu, Y. Pei, D. Chan, M.K. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 99.170 99.170 110.755 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C18 H28 N3 O8 P 445.404 (S)-2-(PHOSPHONOXY)CAPROYL-L-LEUCYL-P-NITROANILIDE non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking O4 P -3 94.971 PHOSPHATE ION non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N O N 251 N P N 252 N O N 253 N O N 254 N O N 255 S C N 256 N C N 257 N C N 258 N C N 259 N C N 260 N C N 261 N O N 262 N N N 263 S C N 264 N C N 265 N C N 266 N C N 267 N C N 268 N C N 269 N N N 270 N O Y 271 N C Y 272 N C Y 273 N C Y 274 N C Y 275 N C Y 276 N C N 277 N N N 278 N O N 279 N O N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N N N 309 S C N 310 N C N 311 N O N 312 N C Y 313 N C Y 314 N C Y 315 N C Y 316 N C Y 317 N C Y 318 N C N 319 N O N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N P N 332 N O N 333 N O N 334 N O N 335 N O N 336 N N N 337 S C N 338 N C N 339 N O N 340 N C N 341 N C N 342 N C N 343 N O N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N N N 354 S C N 355 N C N 356 N O N 357 N C N 358 N O N 359 N O N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N N N 368 S C N 369 N C N 370 N O N 371 R C N 372 N O N 373 N C N 374 N O N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N N N 385 S C N 386 N C N 387 N O N 388 N C Y 389 N C Y 390 N C Y 391 N C Y 392 N C Y 393 N C Y 394 N C N 395 N O N 396 N O N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N N N 409 S C N 410 N C N 411 N O N 412 N C N 413 N C N 414 N C N 415 N O N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N doub N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing Y 282 N doub Y 283 N sing Y 284 N sing N 285 N sing Y 286 N doub N 287 N sing Y 288 N sing N 289 N sing Y 290 N doub N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N doub N 302 N sing N 303 N sing N 304 N sing N 305 N sing Y 306 N doub Y 307 N sing Y 308 N sing N 309 N sing Y 310 N doub N 311 N sing Y 312 N doub N 313 N sing Y 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N doub N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N doub N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N doub N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N doub N 375 N sing N 376 N sing N 377 N sing N 378 N sing Y 379 N doub Y 380 N sing Y 381 N sing N 382 N sing Y 383 N doub N 384 N sing Y 385 N doub N 386 N sing Y 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N doub N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing US Biochemistry BICHAW 0033 0006-2960 38 4712 4719 10.1021/bi982594c 10200158 Structural basis for the design of antibiotics targeting peptide deformylase. 1999 US Biochemistry BICHAW 0033 0006-2960 36 13904 13909 Crystal Structure of the Escherichia Coli Peptide Deformylase 1997 10.2210/pdb1bsk/pdb pdb_00001bsk 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 283 1 IMAGE PLATE 1998-05-15 RIGAKU RAXIS SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU 19226.248 PROTEIN (PEPTIDE DEFORMYLASE) 3.5.1.27 1 nat polymer 65.409 ZINC ION 1 syn non-polymer 94.971 PHOSPHATE ION 1 syn non-polymer 445.404 (S)-2-(PHOSPHONOXY)CAPROYL-L-LEUCYL-P-NITROANILIDE 1 syn non-polymer 18.015 water 13 nat water EC 3.5.1.27 no no SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEK SGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK LDRLKARA SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEK SGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEK LDRLKARA A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia sample BL21(DE3) 562 Escherichia coli 1 4.1 65 7.5 pH 7.5 software chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_site repository Initial release Version format compliance Version format compliance Refinement description Data collection Database references Derived calculations Refinement description 1 0 2000-04-15 1 1 2007-10-16 1 2 2011-07-13 1 3 2017-10-04 1 4 2023-08-09 _software.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id BNL Y RCSB 1998-08-28 REL ZN ZINC ION PO4 PHOSPHATE ION MLN (S)-2-(PHOSPHONOXY)CAPROYL-L-LEUCYL-P-NITROANILIDE HOH water 1DFF PDB ENTRY 1DFF PDB experimental model ZN 1 2 ZN ZN 169 A PO4 1 3 PO4 PO4 170 A MLN 1 4 MLN MLN 171 A HOH 1 5 HOH HOH 172 A HOH 2 5 HOH HOH 173 A HOH 3 5 HOH HOH 174 A HOH 4 5 HOH HOH 175 A HOH 5 5 HOH HOH 176 A HOH 6 5 HOH HOH 177 A HOH 7 5 HOH HOH 178 A HOH 8 5 HOH HOH 179 A HOH 9 5 HOH HOH 180 A HOH 10 5 HOH HOH 181 A HOH 11 5 HOH HOH 182 A HOH 12 5 HOH HOH 183 A HOH 13 5 HOH HOH 184 A SER 1 n 1 SER 1 A VAL 2 n 2 VAL 2 A LEU 3 n 3 LEU 3 A GLN 4 n 4 GLN 4 A VAL 5 n 5 VAL 5 A LEU 6 n 6 LEU 6 A HIS 7 n 7 HIS 7 A ILE 8 n 8 ILE 8 A PRO 9 n 9 PRO 9 A ASP 10 n 10 ASP 10 A GLU 11 n 11 GLU 11 A ARG 12 n 12 ARG 12 A LEU 13 n 13 LEU 13 A ARG 14 n 14 ARG 14 A LYS 15 n 15 LYS 15 A VAL 16 n 16 VAL 16 A ALA 17 n 17 ALA 17 A LYS 18 n 18 LYS 18 A PRO 19 n 19 PRO 19 A VAL 20 n 20 VAL 20 A GLU 21 n 21 GLU 21 A GLU 22 n 22 GLU 22 A VAL 23 n 23 VAL 23 A ASN 24 n 24 ASN 24 A ALA 25 n 25 ALA 25 A GLU 26 n 26 GLU 26 A ILE 27 n 27 ILE 27 A GLN 28 n 28 GLN 28 A ARG 29 n 29 ARG 29 A ILE 30 n 30 ILE 30 A VAL 31 n 31 VAL 31 A ASP 32 n 32 ASP 32 A ASP 33 n 33 ASP 33 A MET 34 n 34 MET 34 A PHE 35 n 35 PHE 35 A GLU 36 n 36 GLU 36 A THR 37 n 37 THR 37 A MET 38 n 38 MET 38 A TYR 39 n 39 TYR 39 A ALA 40 n 40 ALA 40 A GLU 41 n 41 GLU 41 A GLU 42 n 42 GLU 42 A GLY 43 n 43 GLY 43 A ILE 44 n 44 ILE 44 A GLY 45 n 45 GLY 45 A LEU 46 n 46 LEU 46 A ALA 47 n 47 ALA 47 A ALA 48 n 48 ALA 48 A THR 49 n 49 THR 49 A GLN 50 n 50 GLN 50 A VAL 51 n 51 VAL 51 A ASP 52 n 52 ASP 52 A ILE 53 n 53 ILE 53 A HIS 54 n 54 HIS 54 A GLN 55 n 55 GLN 55 A ARG 56 n 56 ARG 56 A ILE 57 n 57 ILE 57 A ILE 58 n 58 ILE 58 A VAL 59 n 59 VAL 59 A ILE 60 n 60 ILE 60 A ASP 61 n 61 ASP 61 A VAL 62 n 62 VAL 62 A SER 63 n 63 SER 63 A GLU 64 n 64 GLU 64 A ASN 65 n 65 ASN 65 A ARG 66 n 66 ARG 66 A ASP 67 n 67 ASP 67 A GLU 68 n 68 GLU 68 A ARG 69 n 69 ARG 69 A LEU 70 n 70 LEU 70 A VAL 71 n 71 VAL 71 A LEU 72 n 72 LEU 72 A ILE 73 n 73 ILE 73 A ASN 74 n 74 ASN 74 A PRO 75 n 75 PRO 75 A GLU 76 n 76 GLU 76 A LEU 77 n 77 LEU 77 A LEU 78 n 78 LEU 78 A GLU 79 n 79 GLU 79 A LYS 80 n 80 LYS 80 A SER 81 n 81 SER 81 A GLY 82 n 82 GLY 82 A GLU 83 n 83 GLU 83 A THR 84 n 84 THR 84 A GLY 85 n 85 GLY 85 A ILE 86 n 86 ILE 86 A GLU 87 n 87 GLU 87 A GLU 88 n 88 GLU 88 A GLY 89 n 89 GLY 89 A CYS 90 n 90 CYS 90 A LEU 91 n 91 LEU 91 A SER 92 n 92 SER 92 A ILE 93 n 93 ILE 93 A PRO 94 n 94 PRO 94 A GLU 95 n 95 GLU 95 A GLN 96 n 96 GLN 96 A ARG 97 n 97 ARG 97 A ALA 98 n 98 ALA 98 A LEU 99 n 99 LEU 99 A VAL 100 n 100 VAL 100 A PRO 101 n 101 PRO 101 A ARG 102 n 102 ARG 102 A ALA 103 n 103 ALA 103 A GLU 104 n 104 GLU 104 A LYS 105 n 105 LYS 105 A VAL 106 n 106 VAL 106 A LYS 107 n 107 LYS 107 A ILE 108 n 108 ILE 108 A ARG 109 n 109 ARG 109 A ALA 110 n 110 ALA 110 A LEU 111 n 111 LEU 111 A ASP 112 n 112 ASP 112 A ARG 113 n 113 ARG 113 A ASP 114 n 114 ASP 114 A GLY 115 n 115 GLY 115 A LYS 116 n 116 LYS 116 A PRO 117 n 117 PRO 117 A PHE 118 n 118 PHE 118 A GLU 119 n 119 GLU 119 A LEU 120 n 120 LEU 120 A GLU 121 n 121 GLU 121 A ALA 122 n 122 ALA 122 A ASP 123 n 123 ASP 123 A GLY 124 n 124 GLY 124 A LEU 125 n 125 LEU 125 A LEU 126 n 126 LEU 126 A ALA 127 n 127 ALA 127 A ILE 128 n 128 ILE 128 A CYS 129 n 129 CYS 129 A ILE 130 n 130 ILE 130 A GLN 131 n 131 GLN 131 A HIS 132 n 132 HIS 132 A GLU 133 n 133 GLU 133 A MET 134 n 134 MET 134 A ASP 135 n 135 ASP 135 A HIS 136 n 136 HIS 136 A LEU 137 n 137 LEU 137 A VAL 138 n 138 VAL 138 A GLY 139 n 139 GLY 139 A LYS 140 n 140 LYS 140 A LEU 141 n 141 LEU 141 A PHE 142 n 142 PHE 142 A MET 143 n 143 MET 143 A ASP 144 n 144 ASP 144 A TYR 145 n 145 TYR 145 A LEU 146 n 146 LEU 146 A SER 147 n 147 SER 147 A PRO 148 n 148 PRO 148 A LEU 149 n 149 LEU 149 A LYS 150 n 150 LYS 150 A GLN 151 n 151 GLN 151 A GLN 152 n 152 GLN 152 A ARG 153 n 153 ARG 153 A ILE 154 n 154 ILE 154 A ARG 155 n 155 ARG 155 A GLN 156 n 156 GLN 156 A LYS 157 n 157 LYS 157 A VAL 158 n 158 VAL 158 A GLU 159 n 159 GLU 159 A LYS 160 n 160 LYS 160 A LEU 161 n 161 LEU 161 A ASP 162 n 162 ASP 162 A ARG 163 n 163 ARG 163 A LEU 164 n 164 LEU 164 A LYS 165 n 165 LYS 165 A ALA 166 n 166 ALA 166 A n 167 167 A n 168 168 A author_defined_assembly 1 monomeric A CYS 90 A SG CYS 90 1_555 A ZN 169 B ZN ZN 1_555 A HIS 132 A NE2 HIS 132 1_555 121.8 A CYS 90 A SG CYS 90 1_555 A ZN 169 B ZN ZN 1_555 A HIS 136 A NE2 HIS 136 1_555 98.7 A HIS 132 A NE2 HIS 132 1_555 A ZN 169 B ZN ZN 1_555 A HIS 136 A NE2 HIS 136 1_555 106.3 A CYS 90 A SG CYS 90 1_555 A ZN 169 B ZN ZN 1_555 A MLN 171 D O3 MLN 1_555 124.8 A HIS 132 A NE2 HIS 132 1_555 A ZN 169 B ZN ZN 1_555 A MLN 171 D O3 MLN 1_555 102.4 A HIS 136 A NE2 HIS 136 1_555 A ZN 169 B ZN ZN 1_555 A MLN 171 D O3 MLN 1_555 98.6 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O LEU 46 A O LEU 46 A N VAL 59 A N VAL 59 A O ILE 58 A O ILE 58 A N LEU 72 A N LEU 72 A O THR 84 A O THR 84 A N ARG 102 A N ARG 102 A O PHE 118 A O PHE 118 A N ALA 110 A N ALA 110 A O LYS 105 A O LYS 105 A N SER 81 A N SER 81 1 A O1 MLN 171 D O1 MLN 1 1 N 1 A ARG 167 A ARG 167 1 Y 1 A ALA 168 A ALA 168 1 Y 1 A ASN 24 -142.02 -158.19 1 A ASP 67 -140.43 20.44 1 A LYS 165 -87.16 41.12 PARHCSDX.PRO PARAM19.SOL 0.2210000 0.1670000 0.1670000 3.0 20.0 450 5879 7.3 88.7 RANDOM 1000000 0.0 1 THROUGHOUT 0.0 MOLECULAR REPLACEMENT PDB ENTRY 1DFF 3.0 20.0 13 1377 35 0 1329 0.015 1.739 0.2850000 0.2330000 3.14 41 533 10 6.3 76.4 3.0 20.0 1BSK 6118 0.0 0.1000000 10.0000000 1 3.2 88.7 0.2810000 3.0 3.1 76.4 model building X-PLOR refinement X-PLOR 3.851 data reduction DENZO data scaling SCALEPACK phasing X-PLOR ZINC DEFORMYLASE INHIBITOR COMPLEX FROM E.COLI 1 N N 2 N N 3 N N 4 N N 5 N N A GLU 11 A GLU 11 HELX_P A ARG 14 A ARG 14 5 1 4 A ALA 25 A ALA 25 HELX_P A ALA 40 A ALA 40 1 2 16 A ALA 48 A ALA 48 HELX_P A VAL 51 A VAL 51 5 3 4 A GLY 124 A GLY 124 HELX_P A VAL 138 A VAL 138 1 4 15 A PHE 142 A PHE 142 HELX_P A TYR 145 A TYR 145 5 5 4 A PRO 148 A PRO 148 HELX_P A LEU 164 A LEU 164 1 6 17 metalc 2.289 A CYS 90 A SG CYS 90 1_555 A ZN 169 B ZN ZN 1_555 metalc 2.062 A HIS 132 A NE2 HIS 132 1_555 A ZN 169 B ZN ZN 1_555 metalc 2.077 A HIS 136 A NE2 HIS 136 1_555 A ZN 169 B ZN ZN 1_555 metalc 2.038 A ZN 169 B ZN ZN 1_555 A MLN 171 D O3 MLN 1_555 HYDROLASE DEFORMYLASE, INHIBITOR, METALLOPROTEINASE, HYDROLASE A ILE 8 A ILE 8 1 A PRO 9 A PRO 9 1.30 DEF_ECOLI UNP 1 P0A6K3 2 169 1BSK 1 168 P0A6K3 A 1 1 168 3 2 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLY 45 A GLY 45 A ALA 47 A ALA 47 A ILE 57 A ILE 57 A ILE 60 A ILE 60 A LEU 70 A LEU 70 A ILE 73 A ILE 73 A THR 84 A THR 84 A GLU 88 A GLU 88 A ALA 98 A ALA 98 A ARG 102 A ARG 102 A PRO 117 A PRO 117 A ALA 122 A ALA 122 A LYS 105 A LYS 105 A LEU 111 A LEU 111 A GLU 76 A GLU 76 A SER 81 A SER 81 BINDING SITE FOR RESIDUE ZN A 169 A ZN 169 Software 5 BINDING SITE FOR RESIDUE PO4 A 170 A PO4 170 Software 7 BINDING SITE FOR RESIDUE MLN A 171 A MLN 171 Software 17 A GLN 50 A GLN 50 5 1_555 A CYS 90 A CYS 90 5 1_555 A HIS 132 A HIS 132 5 1_555 A HIS 136 A HIS 136 5 1_555 A MLN 171 D MLN 5 1_555 A PRO 9 A PRO 9 7 1_555 A ASP 10 A ASP 10 7 1_555 A ARG 14 A ARG 14 7 1_555 A GLN 152 A GLN 152 7 10_666 A ARG 155 A ARG 155 7 10_666 A GLN 156 A GLN 156 7 10_666 A GLU 159 A GLU 159 7 10_666 A GLU 42 A GLU 42 17 1_555 A GLY 43 A GLY 43 17 1_555 A ILE 44 A ILE 44 17 1_555 A GLY 45 A GLY 45 17 1_555 A GLN 50 A GLN 50 17 1_555 A ILE 86 A ILE 86 17 1_555 A ILE 86 A ILE 86 17 11_656 A GLU 88 A GLU 88 17 1_555 A GLY 89 A GLY 89 17 1_555 A LEU 91 A LEU 91 17 1_555 A GLY 124 A GLY 124 17 11_656 A LEU 125 A LEU 125 17 11_656 A ILE 128 A ILE 128 17 11_656 A HIS 132 A HIS 132 17 1_555 A GLU 133 A GLU 133 17 1_555 A HIS 136 A HIS 136 17 1_555 A ZN 169 B ZN 17 1_555 179 P 65 2 2