0.010593
0.000000
0.000000
0.000000
0.010593
0.000000
0.000000
0.000000
0.010593
0.00000
0.00000
0.00000
Ng, K.K.-S.
Park-Snyder, S.
Weis, W.I.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
90.00
94.400
94.400
94.400
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
Ho
164.930
HOLMIUM ATOM
non-polymer
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
HO
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
S
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
N
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
S
N
238
N
C
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
Y
261
N
C
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
N
N
275
S
C
N
276
N
C
N
277
N
O
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
O
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
N
296
N
O
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
R
C
N
310
N
O
N
311
N
C
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
N
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
Y
359
N
C
N
360
N
O
N
361
N
O
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
N
C
N
378
N
C
N
379
N
C
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
37
17965
17976
10.1021/bi981972a
9922165
Ca2+-dependent structural changes in C-type mannose-binding proteins.
1998
10.2210/pdb1buu/pdb
pdb_00001buu
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
0.3 MM COLLIMATOR
IMAGE PLATE
1994-05-15
RIGAKU
GRAPHITE
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
18449.816
PROTEIN (MANNOSE-BINDING PROTEIN A)
LECTIN, TRIMERIZATION, AND PORTION OF COLLAGENOUS DOMAIN DOMAINS
1
man
polymer
164.930
HOLMIUM ATOM
1
syn
non-polymer
18.015
water
171
nat
water
no
no
AIEVSQGPKGQKGDRGDSRAIEVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKKFFVTNHERMPFSKVKALCSELRG
TVAIPRNAEENKAIQEVAKTSAFLGITDEVTEGQFMYVTGGRLTYSNWKKDEPNDHGSGEDCVTIVDNGLWNDISCQASH
TAVCEFPA
AIEVSQGPKGQKGDRGDSRAIEVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKKFFVTNHERMPFSKVKALCSELRG
TVAIPRNAEENKAIQEVAKTSAFLGITDEVTEGQFMYVTGGRLTYSNWKKDEPNDHGSGEDCVTIVDNGLWNDISCQASH
TAVCEFPA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Norway rat
Rattus
Escherichia
sample
10116
LIVER
Rattus norvegicus
PERIPLASM
562
Escherichia coli
JM109
PINIIIOMPA2
1
3.80
67
VAPOR DIFFUSION, HANGING DROP
8.0
HANGING-DROP VAPOR DIFFUSION AGAINST RESERVOIR CONTAINING 11-15% (W/V) PEG 3350, 0.325 MM HOCL3, 100 MM TRIS-CL PH 8.0, 10 MM NACL, 0.02% NAN3., vapor diffusion - hanging drop
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
1998-09-09
1
1
2007-10-16
1
2
2011-07-13
1
3
2023-08-09
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
BNL
Y
RCSB
1998-09-06
REL
REL
HO
HOLMIUM ATOM
HOH
water
THE FIRST 4 RESIDUES IN THE EXPRESSION
CONSTRUCT, ALA-ILE-GLU-VAL, ARE A CLONING
ARTIFACT AND ARE NOT PART OF THE NATIVE
SEQUENCE.
1RTM
PDB ENTRY 1RTM, CHAIN 1
PDB
experimental model
HO
1
2
HO
HO
222
A
HOH
1
3
HOH
HOH
223
A
HOH
2
3
HOH
HOH
224
A
HOH
3
3
HOH
HOH
225
A
HOH
4
3
HOH
HOH
226
A
HOH
5
3
HOH
HOH
227
A
HOH
6
3
HOH
HOH
228
A
HOH
7
3
HOH
HOH
229
A
HOH
8
3
HOH
HOH
230
A
HOH
9
3
HOH
HOH
231
A
HOH
10
3
HOH
HOH
232
A
HOH
11
3
HOH
HOH
233
A
HOH
12
3
HOH
HOH
234
A
HOH
13
3
HOH
HOH
235
A
HOH
14
3
HOH
HOH
236
A
HOH
15
3
HOH
HOH
237
A
HOH
16
3
HOH
HOH
238
A
HOH
17
3
HOH
HOH
239
A
HOH
18
3
HOH
HOH
240
A
HOH
19
3
HOH
HOH
241
A
HOH
20
3
HOH
HOH
242
A
HOH
21
3
HOH
HOH
243
A
HOH
22
3
HOH
HOH
244
A
HOH
23
3
HOH
HOH
245
A
HOH
24
3
HOH
HOH
246
A
HOH
25
3
HOH
HOH
247
A
HOH
26
3
HOH
HOH
248
A
HOH
27
3
HOH
HOH
249
A
HOH
28
3
HOH
HOH
250
A
HOH
29
3
HOH
HOH
251
A
HOH
30
3
HOH
HOH
252
A
HOH
31
3
HOH
HOH
253
A
HOH
32
3
HOH
HOH
254
A
HOH
33
3
HOH
HOH
255
A
HOH
34
3
HOH
HOH
256
A
HOH
35
3
HOH
HOH
257
A
HOH
36
3
HOH
HOH
258
A
HOH
37
3
HOH
HOH
259
A
HOH
38
3
HOH
HOH
260
A
HOH
39
3
HOH
HOH
261
A
HOH
40
3
HOH
HOH
262
A
HOH
41
3
HOH
HOH
263
A
HOH
42
3
HOH
HOH
264
A
HOH
43
3
HOH
HOH
265
A
HOH
44
3
HOH
HOH
266
A
HOH
45
3
HOH
HOH
267
A
HOH
46
3
HOH
HOH
268
A
HOH
47
3
HOH
HOH
269
A
HOH
48
3
HOH
HOH
270
A
HOH
49
3
HOH
HOH
271
A
HOH
50
3
HOH
HOH
272
A
HOH
51
3
HOH
HOH
273
A
HOH
52
3
HOH
HOH
274
A
HOH
53
3
HOH
HOH
275
A
HOH
54
3
HOH
HOH
276
A
HOH
55
3
HOH
HOH
277
A
HOH
56
3
HOH
HOH
278
A
HOH
57
3
HOH
HOH
279
A
HOH
58
3
HOH
HOH
280
A
HOH
59
3
HOH
HOH
281
A
HOH
60
3
HOH
HOH
282
A
HOH
61
3
HOH
HOH
283
A
HOH
62
3
HOH
HOH
284
A
HOH
63
3
HOH
HOH
285
A
HOH
64
3
HOH
HOH
286
A
HOH
65
3
HOH
HOH
287
A
HOH
66
3
HOH
HOH
288
A
HOH
67
3
HOH
HOH
289
A
HOH
68
3
HOH
HOH
290
A
HOH
69
3
HOH
HOH
291
A
HOH
70
3
HOH
HOH
292
A
HOH
71
3
HOH
HOH
293
A
HOH
72
3
HOH
HOH
294
A
HOH
73
3
HOH
HOH
295
A
HOH
74
3
HOH
HOH
296
A
HOH
75
3
HOH
HOH
297
A
HOH
76
3
HOH
HOH
298
A
HOH
77
3
HOH
HOH
299
A
HOH
78
3
HOH
HOH
300
A
HOH
79
3
HOH
HOH
301
A
HOH
80
3
HOH
HOH
302
A
HOH
81
3
HOH
HOH
303
A
HOH
82
3
HOH
HOH
304
A
HOH
83
3
HOH
HOH
305
A
HOH
84
3
HOH
HOH
306
A
HOH
85
3
HOH
HOH
307
A
HOH
86
3
HOH
HOH
308
A
HOH
87
3
HOH
HOH
309
A
HOH
88
3
HOH
HOH
310
A
HOH
89
3
HOH
HOH
311
A
HOH
90
3
HOH
HOH
312
A
HOH
91
3
HOH
HOH
313
A
HOH
92
3
HOH
HOH
314
A
HOH
93
3
HOH
HOH
315
A
HOH
94
3
HOH
HOH
316
A
HOH
95
3
HOH
HOH
317
A
HOH
96
3
HOH
HOH
318
A
HOH
97
3
HOH
HOH
319
A
HOH
98
3
HOH
HOH
320
A
HOH
99
3
HOH
HOH
321
A
HOH
100
3
HOH
HOH
322
A
HOH
101
3
HOH
HOH
323
A
HOH
102
3
HOH
HOH
324
A
HOH
103
3
HOH
HOH
325
A
HOH
104
3
HOH
HOH
326
A
HOH
105
3
HOH
HOH
327
A
HOH
106
3
HOH
HOH
328
A
HOH
107
3
HOH
HOH
329
A
HOH
108
3
HOH
HOH
330
A
HOH
109
3
HOH
HOH
331
A
HOH
110
3
HOH
HOH
332
A
HOH
111
3
HOH
HOH
333
A
HOH
112
3
HOH
HOH
334
A
HOH
113
3
HOH
HOH
335
A
HOH
114
3
HOH
HOH
336
A
HOH
115
3
HOH
HOH
337
A
HOH
116
3
HOH
HOH
338
A
HOH
117
3
HOH
HOH
339
A
HOH
118
3
HOH
HOH
340
A
HOH
119
3
HOH
HOH
341
A
HOH
120
3
HOH
HOH
342
A
HOH
121
3
HOH
HOH
343
A
HOH
122
3
HOH
HOH
344
A
HOH
123
3
HOH
HOH
345
A
HOH
124
3
HOH
HOH
346
A
HOH
125
3
HOH
HOH
347
A
HOH
126
3
HOH
HOH
348
A
HOH
127
3
HOH
HOH
349
A
HOH
128
3
HOH
HOH
350
A
HOH
129
3
HOH
HOH
351
A
HOH
130
3
HOH
HOH
352
A
HOH
131
3
HOH
HOH
353
A
HOH
132
3
HOH
HOH
354
A
HOH
133
3
HOH
HOH
355
A
HOH
134
3
HOH
HOH
356
A
HOH
135
3
HOH
HOH
357
A
HOH
136
3
HOH
HOH
358
A
HOH
137
3
HOH
HOH
359
A
HOH
138
3
HOH
HOH
360
A
HOH
139
3
HOH
HOH
361
A
HOH
140
3
HOH
HOH
362
A
HOH
141
3
HOH
HOH
363
A
HOH
142
3
HOH
HOH
364
A
HOH
143
3
HOH
HOH
365
A
HOH
144
3
HOH
HOH
366
A
HOH
145
3
HOH
HOH
367
A
HOH
146
3
HOH
HOH
368
A
HOH
147
3
HOH
HOH
369
A
HOH
148
3
HOH
HOH
370
A
HOH
149
3
HOH
HOH
371
A
HOH
150
3
HOH
HOH
372
A
HOH
151
3
HOH
HOH
373
A
HOH
152
3
HOH
HOH
374
A
HOH
153
3
HOH
HOH
375
A
HOH
154
3
HOH
HOH
376
A
HOH
155
3
HOH
HOH
377
A
HOH
156
3
HOH
HOH
378
A
HOH
157
3
HOH
HOH
379
A
HOH
158
3
HOH
HOH
380
A
HOH
159
3
HOH
HOH
381
A
HOH
160
3
HOH
HOH
382
A
HOH
161
3
HOH
HOH
383
A
HOH
162
3
HOH
HOH
384
A
HOH
163
3
HOH
HOH
385
A
HOH
164
3
HOH
HOH
386
A
HOH
165
3
HOH
HOH
387
A
HOH
166
3
HOH
HOH
388
A
HOH
167
3
HOH
HOH
389
A
HOH
168
3
HOH
HOH
390
A
HOH
169
3
HOH
HOH
391
A
HOH
170
3
HOH
HOH
392
A
HOH
171
3
HOH
HOH
393
A
n
1
54
A
n
2
55
A
n
3
56
A
n
4
57
A
n
5
58
A
n
6
59
A
n
7
60
A
n
8
61
A
n
9
62
A
n
10
63
A
n
11
64
A
n
12
65
A
n
13
66
A
n
14
67
A
n
15
68
A
n
16
69
A
n
17
70
A
n
18
71
A
n
19
72
A
ALA
73
n
20
ALA
73
A
ILE
74
n
21
ILE
74
A
GLU
75
n
22
GLU
75
A
VAL
76
n
23
VAL
76
A
LYS
77
n
24
LYS
77
A
LEU
78
n
25
LEU
78
A
ALA
79
n
26
ALA
79
A
ASN
80
n
27
ASN
80
A
MET
81
n
28
MET
81
A
GLU
82
n
29
GLU
82
A
ALA
83
n
30
ALA
83
A
GLU
84
n
31
GLU
84
A
ILE
85
n
32
ILE
85
A
ASN
86
n
33
ASN
86
A
THR
87
n
34
THR
87
A
LEU
88
n
35
LEU
88
A
LYS
89
n
36
LYS
89
A
SER
90
n
37
SER
90
A
LYS
91
n
38
LYS
91
A
LEU
92
n
39
LEU
92
A
GLU
93
n
40
GLU
93
A
LEU
94
n
41
LEU
94
A
THR
95
n
42
THR
95
A
ASN
96
n
43
ASN
96
A
LYS
97
n
44
LYS
97
A
LEU
98
n
45
LEU
98
A
HIS
99
n
46
HIS
99
A
ALA
100
n
47
ALA
100
A
PHE
101
n
48
PHE
101
A
SER
102
n
49
SER
102
A
MET
103
n
50
MET
103
A
GLY
104
n
51
GLY
104
A
LYS
105
n
52
LYS
105
A
LYS
106
n
53
LYS
106
A
SER
107
n
54
SER
107
A
GLY
108
n
55
GLY
108
A
LYS
109
n
56
LYS
109
A
LYS
110
n
57
LYS
110
A
PHE
111
n
58
PHE
111
A
PHE
112
n
59
PHE
112
A
VAL
113
n
60
VAL
113
A
THR
114
n
61
THR
114
A
ASN
115
n
62
ASN
115
A
HIS
116
n
63
HIS
116
A
GLU
117
n
64
GLU
117
A
ARG
118
n
65
ARG
118
A
MET
119
n
66
MET
119
A
PRO
120
n
67
PRO
120
A
PHE
121
n
68
PHE
121
A
SER
122
n
69
SER
122
A
LYS
123
n
70
LYS
123
A
VAL
124
n
71
VAL
124
A
LYS
125
n
72
LYS
125
A
ALA
126
n
73
ALA
126
A
LEU
127
n
74
LEU
127
A
CYS
128
n
75
CYS
128
A
SER
129
n
76
SER
129
A
GLU
130
n
77
GLU
130
A
LEU
131
n
78
LEU
131
A
ARG
132
n
79
ARG
132
A
GLY
133
n
80
GLY
133
A
THR
134
n
81
THR
134
A
VAL
135
n
82
VAL
135
A
ALA
136
n
83
ALA
136
A
ILE
137
n
84
ILE
137
A
PRO
138
n
85
PRO
138
A
ARG
139
n
86
ARG
139
A
ASN
140
n
87
ASN
140
A
ALA
141
n
88
ALA
141
A
GLU
142
n
89
GLU
142
A
GLU
143
n
90
GLU
143
A
ASN
144
n
91
ASN
144
A
LYS
145
n
92
LYS
145
A
ALA
146
n
93
ALA
146
A
ILE
147
n
94
ILE
147
A
GLN
148
n
95
GLN
148
A
GLU
149
n
96
GLU
149
A
VAL
150
n
97
VAL
150
A
ALA
151
n
98
ALA
151
A
LYS
152
n
99
LYS
152
A
THR
153
n
100
THR
153
A
SER
154
n
101
SER
154
A
ALA
155
n
102
ALA
155
A
PHE
156
n
103
PHE
156
A
LEU
157
n
104
LEU
157
A
GLY
158
n
105
GLY
158
A
ILE
159
n
106
ILE
159
A
THR
160
n
107
THR
160
A
ASP
161
n
108
ASP
161
A
GLU
162
n
109
GLU
162
A
VAL
163
n
110
VAL
163
A
THR
164
n
111
THR
164
A
GLU
165
n
112
GLU
165
A
GLY
166
n
113
GLY
166
A
GLN
167
n
114
GLN
167
A
PHE
168
n
115
PHE
168
A
MET
169
n
116
MET
169
A
TYR
170
n
117
TYR
170
A
VAL
171
n
118
VAL
171
A
THR
172
n
119
THR
172
A
GLY
173
n
120
GLY
173
A
GLY
174
n
121
GLY
174
A
ARG
175
n
122
ARG
175
A
LEU
176
n
123
LEU
176
A
THR
177
n
124
THR
177
A
TYR
178
n
125
TYR
178
A
SER
179
n
126
SER
179
A
ASN
180
n
127
ASN
180
A
TRP
181
n
128
TRP
181
A
LYS
182
n
129
LYS
182
A
LYS
183
n
130
LYS
183
A
ASP
184
n
131
ASP
184
A
GLU
185
n
132
GLU
185
A
PRO
186
n
133
PRO
186
A
ASN
187
n
134
ASN
187
A
ASP
188
n
135
ASP
188
A
HIS
189
n
136
HIS
189
A
GLY
190
n
137
GLY
190
A
SER
191
n
138
SER
191
A
GLY
192
n
139
GLY
192
A
GLU
193
n
140
GLU
193
A
ASP
194
n
141
ASP
194
A
CYS
195
n
142
CYS
195
A
VAL
196
n
143
VAL
196
A
THR
197
n
144
THR
197
A
ILE
198
n
145
ILE
198
A
VAL
199
n
146
VAL
199
A
ASP
200
n
147
ASP
200
A
ASN
201
n
148
ASN
201
A
GLY
202
n
149
GLY
202
A
LEU
203
n
150
LEU
203
A
TRP
204
n
151
TRP
204
A
ASN
205
n
152
ASN
205
A
ASP
206
n
153
ASP
206
A
ILE
207
n
154
ILE
207
A
SER
208
n
155
SER
208
A
CYS
209
n
156
CYS
209
A
GLN
210
n
157
GLN
210
A
ALA
211
n
158
ALA
211
A
SER
212
n
159
SER
212
A
HIS
213
n
160
HIS
213
A
THR
214
n
161
THR
214
A
ALA
215
n
162
ALA
215
A
VAL
216
n
163
VAL
216
A
CYS
217
n
164
CYS
217
A
GLU
218
n
165
GLU
218
A
PHE
219
n
166
PHE
219
A
PRO
220
n
167
PRO
220
A
ALA
221
n
168
ALA
221
A
author_defined_assembly
3
trimeric
software_defined_assembly
PISA,PQS
3
trimeric
6480
-87
21350
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
7_665
-z+3/2,-x+1,y+1/2
crystal symmetry operation
141.6000000000
94.4000000000
47.2000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
-1.0000000000
0.0000000000
0.0000000000
10_646
-y+1,z-1/2,-x+3/2
crystal symmetry operation
94.4000000000
-47.2000000000
141.6000000000
0.0000000000
0.0000000000
1.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
5_546
z,x-1,y+1
crystal symmetry operation
0.0000000000
-94.4000000000
94.4000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1.0000000000
0.0000000000
0.0000000000
9_645
y+1,z-1,x
crystal symmetry operation
94.4000000000
-94.4000000000
0.0000000000
A
O
PHE
111
A
O
PHE
58
A
N
PHE
219
A
N
PHE
166
A
O
CYS
195
A
O
CYS
142
A
N
ILE
207
A
N
ILE
154
1
A
ALA
54
A
ALA
1
1
Y
1
A
ILE
55
A
ILE
2
1
Y
1
A
GLU
56
A
GLU
3
1
Y
1
A
VAL
57
A
VAL
4
1
Y
1
A
SER
58
A
SER
5
1
Y
1
A
GLN
59
A
GLN
6
1
Y
1
A
GLY
60
A
GLY
7
1
Y
1
A
PRO
61
A
PRO
8
1
Y
1
A
LYS
62
A
LYS
9
1
Y
1
A
GLY
63
A
GLY
10
1
Y
1
A
GLN
64
A
GLN
11
1
Y
1
A
LYS
65
A
LYS
12
1
Y
1
A
GLY
66
A
GLY
13
1
Y
1
A
ASP
67
A
ASP
14
1
Y
1
A
ARG
68
A
ARG
15
1
Y
1
A
GLY
69
A
GLY
16
1
Y
1
A
ASP
70
A
ASP
17
1
Y
1
A
SER
71
A
SER
18
1
Y
1
A
ARG
72
A
ARG
19
1
Y
1
A
LYS
152
70.22
-9.27
1
A
ASN
180
-147.92
53.77
1
A
LYS
183
-135.25
-99.47
PROTEIN_REP.PARAM
PROTEIN.TOP
ION.PARAM
ION.TOP
WATER_REP.PARAM
WATER.TOP
28.9
MLF TARGET USED. THE FIRST 19 RESIDUES OF THE EXPRESSION CONSTRUCT,
CONTAINING SEQUENCE FROM THE COLLAGENOUS DOMAIN, ARE
DISORDERED AND CANNOT BE DISTINGUISHED IN ELECTRON
DENSITY.
0.214
0.005
0.198
0.198
1.90
50.
2020
20530
9.0
91.8
RANDOM
1000000
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB ENTRY 1RTM, CHAIN 1
FLAT MODEL
80.9
0.45
0.24
0.21
5.
0.13
0.12
1.90
50.
171
1325
1
0
1153
0.005
1.3
20.7
0.75
1.3
1.5
2.1
2.0
2.1
2.0
3.2
2.5
0.271
.020
0.233
1.97
125
1104
10
5.7
56.6
12.1
1.90
50
1BUU
20530
-3.
0.056
0.056
1
7.0
95.1
0.215
1.90
1.97
0.215
1
3.9
88.0
data reduction
DENZO
data scaling
SCALEPACK
model building
X-PLOR
refinement
CNS
0.3C
phasing
X-PLOR
ONE HO3+ FORM OF RAT MANNOSE-BINDING PROTEIN A
1
N
N
2
N
N
3
N
N
A
ILE
74
A
ILE
21
HELX_P
A
SER
102
A
SER
49
1
1
29
A
PHE
121
A
PHE
68
HELX_P
A
GLU
130
A
GLU
77
1
2
10
A
ALA
141
A
ALA
88
HELX_P
A
ALA
151
A
ALA
98
1
3
11
disulf
2.035
A
CYS
128
A
SG
CYS
75
1_555
A
CYS
217
A
SG
CYS
164
1_555
disulf
2.030
A
CYS
195
A
SG
CYS
142
1_555
A
CYS
209
A
SG
CYS
156
1_555
SUGAR BINDING PROTEIN
LECTIN, HOST DEFENSE, METALLOPROTEIN, SUGAR BINDING PROTEIN
MBL1_RAT
UNP
1
P19999
71
238
1BUU
54
221
P19999
A
1
1
168
1
GLY
expression tag
ALA
54
1BUU
A
P19999
UNP
71
1
1
ALA
expression tag
ILE
55
1BUU
A
P19999
UNP
72
2
1
PRO
expression tag
GLU
56
1BUU
A
P19999
UNP
73
3
1
GLY
expression tag
VAL
57
1BUU
A
P19999
UNP
74
4
2
2
anti-parallel
anti-parallel
A
PHE
111
A
PHE
58
A
THR
114
A
THR
61
A
VAL
216
A
VAL
163
A
PHE
219
A
PHE
166
A
CYS
195
A
CYS
142
A
ILE
198
A
ILE
145
A
TRP
204
A
TRP
151
A
ILE
207
A
ILE
154
THIS IS DESIGNATED CALCIUM SITE 1 IN THE CALCIUM-BOUND MBP STRUCTURES
Author
6
BINDING SITE FOR RESIDUE HO A 222
A
HO
222
Software
6
A
ASP
161
A
ASP
108
6
1_555
A
GLU
165
A
GLU
112
6
1_555
A
ASP
188
A
ASP
135
6
1_555
A
GLU
193
A
GLU
140
6
1_555
A
ASP
194
A
ASP
141
6
1_555
A
HOH
252
C
HOH
6
1_555
A
ASP
161
A
ASP
108
6
1_555
A
GLU
165
A
GLU
112
6
1_555
A
ASP
188
A
ASP
135
6
1_555
A
GLU
193
A
GLU
140
6
1_555
A
ASP
194
A
ASP
141
6
1_555
A
HOH
252
C
HOH
6
1_555
198
P 21 3