1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Poznanski, J.
Sodano, P.
Suh, S.W.
Lee, J.Y.
Ptak, M.
Vovelle, F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
IX
Eur.J.Biochem.
EJBCAI
0262
0014-2956
259
692
708
10.1046/j.1432-1327.1999.00093.x
10092854
Solution structure of a lipid transfer protein extracted from rice seeds. Comparison with homologous proteins.
1999
10.2210/pdb1bv2/pdb
pdb_00001bv2
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
8919.187
NONSPECIFIC LIPID TRANSFER PROTEIN
1
nat
polymer
no
no
ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYT
ISASIDCSRVS
ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYT
ISASIDCSRVS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
rice
Oryza
sample
4530
SEEDS
Oryza sativa
database_2
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
struct_keywords
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Other
Structure summary
1
0
1999-05-18
1
1
2008-03-24
1
2
2011-07-13
1
3
2022-02-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_keywords.text
Y
BNL
1998-09-21
REL
LEAST RESTRAINT VIOLATION AND ANALYSIS OF THE RAMACHANDRAN MAPS AND ENERGETIC CRITERIA
200
14
NOESY TOCSY P-COSY 2Q-COSY
6.4
1
atm
293
K
distance geometry
90% H2O AND 10% D2O
BRUNGER
refinement
X-PLOR
3.1
structure solution
XEASY
structure solution
DIANA
structure solution
X-PLOR
500
Bruker
AMX-500
ILE
1
n
1
ILE
1
A
THR
2
n
2
THR
2
A
CYS
3
n
3
CYS
3
A
GLY
4
n
4
GLY
4
A
GLN
5
n
5
GLN
5
A
VAL
6
n
6
VAL
6
A
ASN
7
n
7
ASN
7
A
SER
8
n
8
SER
8
A
ALA
9
n
9
ALA
9
A
VAL
10
n
10
VAL
10
A
GLY
11
n
11
GLY
11
A
PRO
12
n
12
PRO
12
A
CYS
13
n
13
CYS
13
A
LEU
14
n
14
LEU
14
A
THR
15
n
15
THR
15
A
TYR
16
n
16
TYR
16
A
ALA
17
n
17
ALA
17
A
ARG
18
n
18
ARG
18
A
GLY
19
n
19
GLY
19
A
GLY
20
n
20
GLY
20
A
ALA
21
n
21
ALA
21
A
GLY
22
n
22
GLY
22
A
PRO
23
n
23
PRO
23
A
SER
24
n
24
SER
24
A
ALA
25
n
25
ALA
25
A
ALA
26
n
26
ALA
26
A
CYS
27
n
27
CYS
27
A
CYS
28
n
28
CYS
28
A
SER
29
n
29
SER
29
A
GLY
30
n
30
GLY
30
A
VAL
31
n
31
VAL
31
A
ARG
32
n
32
ARG
32
A
SER
33
n
33
SER
33
A
LEU
34
n
34
LEU
34
A
LYS
35
n
35
LYS
35
A
ALA
36
n
36
ALA
36
A
ALA
37
n
37
ALA
37
A
ALA
38
n
38
ALA
38
A
SER
39
n
39
SER
39
A
THR
40
n
40
THR
40
A
THR
41
n
41
THR
41
A
ALA
42
n
42
ALA
42
A
ASP
43
n
43
ASP
43
A
ARG
44
n
44
ARG
44
A
ARG
45
n
45
ARG
45
A
THR
46
n
46
THR
46
A
ALA
47
n
47
ALA
47
A
CYS
48
n
48
CYS
48
A
ASN
49
n
49
ASN
49
A
CYS
50
n
50
CYS
50
A
LEU
51
n
51
LEU
51
A
LYS
52
n
52
LYS
52
A
ASN
53
n
53
ASN
53
A
ALA
54
n
54
ALA
54
A
ALA
55
n
55
ALA
55
A
ARG
56
n
56
ARG
56
A
GLY
57
n
57
GLY
57
A
ILE
58
n
58
ILE
58
A
LYS
59
n
59
LYS
59
A
GLY
60
n
60
GLY
60
A
LEU
61
n
61
LEU
61
A
ASN
62
n
62
ASN
62
A
ALA
63
n
63
ALA
63
A
GLY
64
n
64
GLY
64
A
ASN
65
n
65
ASN
65
A
ALA
66
n
66
ALA
66
A
ALA
67
n
67
ALA
67
A
SER
68
n
68
SER
68
A
ILE
69
n
69
ILE
69
A
PRO
70
n
70
PRO
70
A
SER
71
n
71
SER
71
A
LYS
72
n
72
LYS
72
A
CYS
73
n
73
CYS
73
A
GLY
74
n
74
GLY
74
A
VAL
75
n
75
VAL
75
A
SER
76
n
76
SER
76
A
VAL
77
n
77
VAL
77
A
PRO
78
n
78
PRO
78
A
TYR
79
n
79
TYR
79
A
THR
80
n
80
THR
80
A
ILE
81
n
81
ILE
81
A
SER
82
n
82
SER
82
A
ALA
83
n
83
ALA
83
A
SER
84
n
84
SER
84
A
ILE
85
n
85
ILE
85
A
ASP
86
n
86
ASP
86
A
CYS
87
n
87
CYS
87
A
SER
88
n
88
SER
88
A
ARG
89
n
89
ARG
89
A
VAL
90
n
90
VAL
90
A
SER
91
n
91
SER
91
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
ARG
18
0.311
SIDE CHAIN
1
A
ARG
32
0.279
SIDE CHAIN
1
A
ARG
44
0.310
SIDE CHAIN
1
A
ARG
45
0.274
SIDE CHAIN
1
A
ARG
56
0.295
SIDE CHAIN
1
A
ARG
89
0.311
SIDE CHAIN
2
A
ARG
18
0.310
SIDE CHAIN
2
A
ARG
32
0.318
SIDE CHAIN
2
A
ARG
44
0.314
SIDE CHAIN
2
A
ARG
45
0.210
SIDE CHAIN
2
A
ARG
56
0.270
SIDE CHAIN
2
A
ARG
89
0.322
SIDE CHAIN
3
A
ARG
18
0.243
SIDE CHAIN
3
A
ARG
32
0.315
SIDE CHAIN
3
A
ARG
44
0.285
SIDE CHAIN
3
A
ARG
45
0.291
SIDE CHAIN
3
A
ARG
56
0.301
SIDE CHAIN
3
A
ARG
89
0.314
SIDE CHAIN
4
A
ARG
18
0.288
SIDE CHAIN
4
A
ARG
32
0.293
SIDE CHAIN
4
A
ARG
44
0.308
SIDE CHAIN
4
A
ARG
45
0.270
SIDE CHAIN
4
A
ARG
56
0.291
SIDE CHAIN
4
A
ARG
89
0.313
SIDE CHAIN
5
A
ARG
18
0.256
SIDE CHAIN
5
A
ARG
32
0.309
SIDE CHAIN
5
A
ARG
44
0.287
SIDE CHAIN
5
A
ARG
45
0.322
SIDE CHAIN
5
A
ARG
56
0.300
SIDE CHAIN
5
A
ARG
89
0.257
SIDE CHAIN
6
A
ARG
18
0.276
SIDE CHAIN
6
A
ARG
32
0.314
SIDE CHAIN
6
A
ARG
44
0.273
SIDE CHAIN
6
A
ARG
45
0.220
SIDE CHAIN
6
A
ARG
56
0.317
SIDE CHAIN
6
A
ARG
89
0.300
SIDE CHAIN
7
A
ARG
18
0.312
SIDE CHAIN
7
A
ARG
32
0.313
SIDE CHAIN
7
A
ARG
44
0.262
SIDE CHAIN
7
A
ARG
45
0.297
SIDE CHAIN
7
A
ARG
56
0.273
SIDE CHAIN
7
A
ARG
89
0.297
SIDE CHAIN
8
A
ARG
18
0.212
SIDE CHAIN
8
A
ARG
32
0.304
SIDE CHAIN
8
A
ARG
44
0.304
SIDE CHAIN
8
A
ARG
45
0.314
SIDE CHAIN
8
A
ARG
56
0.174
SIDE CHAIN
8
A
ARG
89
0.215
SIDE CHAIN
9
A
ARG
18
0.275
SIDE CHAIN
9
A
ARG
32
0.313
SIDE CHAIN
9
A
ARG
44
0.316
SIDE CHAIN
9
A
ARG
45
0.284
SIDE CHAIN
9
A
ARG
56
0.242
SIDE CHAIN
9
A
ARG
89
0.301
SIDE CHAIN
10
A
ARG
18
0.282
SIDE CHAIN
10
A
ARG
32
0.191
SIDE CHAIN
10
A
ARG
44
0.301
SIDE CHAIN
10
A
ARG
45
0.310
SIDE CHAIN
10
A
ARG
56
0.236
SIDE CHAIN
10
A
ARG
89
0.314
SIDE CHAIN
11
A
ARG
18
0.305
SIDE CHAIN
11
A
ARG
32
0.286
SIDE CHAIN
11
A
ARG
44
0.202
SIDE CHAIN
11
A
ARG
45
0.306
SIDE CHAIN
11
A
ARG
56
0.157
SIDE CHAIN
11
A
ARG
89
0.262
SIDE CHAIN
12
A
ARG
18
0.316
SIDE CHAIN
12
A
ARG
32
0.270
SIDE CHAIN
12
A
ARG
44
0.182
SIDE CHAIN
12
A
ARG
45
0.260
SIDE CHAIN
12
A
ARG
56
0.312
SIDE CHAIN
12
A
ARG
89
0.313
SIDE CHAIN
13
A
ARG
18
0.269
SIDE CHAIN
13
A
ARG
32
0.306
SIDE CHAIN
13
A
ARG
44
0.308
SIDE CHAIN
13
A
ARG
45
0.253
SIDE CHAIN
13
A
ARG
56
0.314
SIDE CHAIN
13
A
ARG
89
0.259
SIDE CHAIN
14
A
ARG
18
0.314
SIDE CHAIN
14
A
ARG
32
0.301
SIDE CHAIN
14
A
ARG
44
0.290
SIDE CHAIN
14
A
ARG
45
0.195
SIDE CHAIN
14
A
ARG
56
0.303
SIDE CHAIN
14
A
ARG
89
0.279
SIDE CHAIN
1
-3.02
0.50
120.30
117.28
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
56
56
56
N
3
-4.21
0.50
120.30
116.09
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
45
45
45
N
4
-3.29
0.50
120.30
117.01
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
44
44
44
N
6
6.63
1.10
114.20
120.83
A
A
A
CA
CB
SG
CYS
CYS
CYS
73
73
73
N
9
6.83
1.10
114.20
121.03
A
A
A
CA
CB
SG
CYS
CYS
CYS
13
13
13
N
1
A
ALA
55
-71.19
28.42
1
A
LYS
59
-97.41
34.23
1
A
SER
76
117.23
91.75
1
A
ILE
81
31.28
66.47
1
A
ILE
85
-18.66
78.24
1
A
ASP
86
-94.26
37.68
1
A
CYS
87
28.70
-126.65
1
A
SER
88
44.45
26.77
2
A
THR
2
-114.17
-167.35
2
A
SER
76
-31.89
89.37
2
A
SER
84
-110.79
54.61
2
A
SER
88
93.40
-54.00
2
A
ARG
89
-94.43
59.89
3
A
ALA
55
-56.86
10.58
3
A
LYS
59
-10.40
82.85
3
A
VAL
75
-116.74
62.76
3
A
SER
76
-33.98
95.07
3
A
ILE
81
32.04
52.70
3
A
SER
88
122.99
-42.39
3
A
ARG
89
-99.19
44.16
4
A
ALA
55
-74.58
35.79
4
A
ILE
58
-107.84
55.74
4
A
LYS
59
-20.81
76.23
4
A
ASN
65
-131.23
-49.75
4
A
SER
76
30.74
86.94
4
A
TYR
79
165.46
156.52
4
A
SER
84
-143.15
50.52
4
A
ARG
89
43.37
73.97
4
A
VAL
90
-80.73
40.38
5
A
ALA
55
-57.21
-2.50
5
A
ARG
56
-95.19
57.28
5
A
ILE
58
-108.31
74.08
5
A
LYS
59
11.65
60.93
5
A
ASN
65
-131.43
-43.20
5
A
VAL
75
-117.04
63.18
5
A
SER
76
-33.09
87.38
5
A
THR
80
-145.95
-156.26
5
A
SER
88
114.55
-37.28
5
A
ARG
89
-93.59
47.05
5
A
VAL
90
-124.28
-59.91
6
A
VAL
10
-79.53
24.17
6
A
ALA
38
-88.55
46.37
6
A
ALA
55
-78.97
36.74
6
A
ILE
58
-108.21
54.07
6
A
LYS
59
-8.77
70.73
6
A
VAL
75
-111.40
68.70
6
A
SER
76
-33.58
96.14
6
A
ILE
81
32.57
62.61
6
A
ASP
86
-130.72
-80.39
6
A
CYS
87
75.58
174.59
6
A
SER
88
144.26
-54.42
6
A
ARG
89
-117.21
59.03
7
A
ARG
56
-22.17
-47.30
7
A
ILE
58
-101.26
67.96
7
A
LYS
59
-16.91
-52.41
7
A
SER
76
103.51
104.16
7
A
ILE
85
-1.25
83.00
7
A
SER
88
124.69
-39.48
7
A
ARG
89
-110.00
52.16
8
A
ALA
55
-81.53
39.31
8
A
LYS
59
-37.12
96.75
8
A
ASN
65
-133.17
-52.82
8
A
SER
76
31.24
92.31
8
A
THR
80
-142.20
-149.59
8
A
CYS
87
-110.73
66.13
8
A
ARG
89
63.76
75.97
9
A
VAL
10
-79.07
31.45
9
A
SER
39
-103.65
-64.57
9
A
THR
41
19.45
-73.29
9
A
VAL
75
-114.64
60.16
9
A
SER
76
-34.29
92.78
9
A
ILE
85
-8.05
107.77
9
A
CYS
87
-105.07
61.71
10
A
SER
39
-121.53
-59.39
10
A
ALA
55
-72.58
32.38
10
A
ILE
58
-116.45
58.97
10
A
LYS
59
-6.05
-59.86
10
A
VAL
75
-115.31
58.60
10
A
SER
76
-31.87
92.89
10
A
ILE
81
37.26
56.92
10
A
SER
84
-97.66
-73.16
10
A
ILE
85
3.14
81.41
10
A
CYS
87
-30.64
128.27
10
A
SER
88
-172.92
-42.95
11
A
ALA
38
-97.69
47.47
11
A
SER
39
-34.20
-71.65
11
A
THR
41
18.57
-74.74
11
A
ALA
55
-70.07
29.93
11
A
ILE
58
-114.36
70.87
11
A
LYS
59
-53.83
80.36
11
A
VAL
75
-118.97
64.85
11
A
SER
76
-30.58
99.56
11
A
TYR
79
155.04
163.72
11
A
THR
80
-176.23
-150.66
11
A
SER
82
-102.83
-159.52
11
A
ALA
83
-101.19
-64.96
11
A
SER
88
108.45
-37.80
11
A
ARG
89
-95.28
37.17
12
A
VAL
10
-78.02
28.97
12
A
LYS
59
0.76
-67.04
12
A
VAL
75
-117.10
63.85
12
A
SER
76
-30.28
95.09
12
A
ILE
81
29.71
56.84
12
A
ILE
85
-25.42
137.76
12
A
SER
88
123.68
-51.62
13
A
VAL
10
-81.88
34.45
13
A
ILE
58
-103.98
67.19
13
A
LYS
59
-12.18
-55.92
13
A
SER
76
29.18
69.00
13
A
PRO
78
-97.99
32.61
13
A
TYR
79
156.04
155.45
13
A
THR
80
-144.28
-148.14
13
A
SER
88
128.37
-35.88
13
A
ARG
89
-92.09
50.27
14
A
ALA
55
-59.61
12.16
14
A
LYS
59
-5.94
-63.68
14
A
VAL
75
-116.74
56.60
14
A
SER
76
-33.15
83.63
14
A
THR
80
-144.43
-154.18
14
A
CYS
87
120.56
155.10
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
phasing
X-PLOR
3.1
LIPID TRANSFER PROTEIN FROM RICE SEEDS, NMR, 14 STRUCTURES
1
Y
N
A
CYS
3
A
CYS
3
HELX_P
BENT AT PRO 12
A
ARG
18
A
ARG
18
1
H1
16
A
ALA
25
A
ALA
25
HELX_P
A
ALA
37
A
ALA
37
1
H2
13
A
THR
41
A
THR
41
HELX_P
A
ALA
54
A
ALA
54
1
H3
14
A
ALA
66
A
ALA
66
HELX_P
A
CYS
73
A
CYS
73
1
H4
8
disulf
2.020
A
CYS
3
A
SG
CYS
3
1_555
A
CYS
50
A
SG
CYS
50
1_555
disulf
2.019
A
CYS
13
A
SG
CYS
13
1_555
A
CYS
27
A
SG
CYS
27
1_555
disulf
2.021
A
CYS
28
A
SG
CYS
28
1_555
A
CYS
73
A
SG
CYS
73
1_555
disulf
2.019
A
CYS
48
A
SG
CYS
48
1_555
A
CYS
87
A
SG
CYS
87
1_555
LIPID BINDING PROTEIN
LIPID-BINDING PROTEIN, LIPID TRANSFER PROTEIN, RICE, MOLECULAR MODELING, LIPID BINDING PROTEIN
A
GLY
22
A
GLY
22
1
A
PRO
23
A
PRO
23
8.00
A
GLY
22
A
GLY
22
2
A
PRO
23
A
PRO
23
7.43
A
GLY
22
A
GLY
22
3
A
PRO
23
A
PRO
23
-2.27
A
GLY
22
A
GLY
22
4
A
PRO
23
A
PRO
23
-7.77
A
GLY
22
A
GLY
22
5
A
PRO
23
A
PRO
23
-2.40
A
GLY
22
A
GLY
22
6
A
PRO
23
A
PRO
23
-3.15
A
GLY
22
A
GLY
22
7
A
PRO
23
A
PRO
23
-2.19
A
GLY
22
A
GLY
22
8
A
PRO
23
A
PRO
23
-1.39
A
GLY
22
A
GLY
22
9
A
PRO
23
A
PRO
23
-15.98
A
GLY
22
A
GLY
22
10
A
PRO
23
A
PRO
23
-1.38
A
GLY
22
A
GLY
22
11
A
PRO
23
A
PRO
23
-5.14
A
GLY
22
A
GLY
22
12
A
PRO
23
A
PRO
23
-14.38
A
GLY
22
A
GLY
22
13
A
PRO
23
A
PRO
23
-4.99
A
GLY
22
A
GLY
22
14
A
PRO
23
A
PRO
23
-2.10
NLTP1_ORYSA
UNP
1
1
P23096
MARAQLVLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLFAAASTTADRRTACNCLKNAA
RGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRVS
26
116
1BV2
1
91
P23096
A
1
1
91
1
PHE
SEE REMARK 999
LYS
35
1BV2
A
P23096
UNP
60
35
1
P 1