0.014663 0.000000 0.000000 0.000000 0.014663 0.000000 0.000000 0.000000 0.005923 0.00000 0.00000 0.00000 Iverson, T.M. Arciero, D.M. Hsu, B.T. Logan, M.S.P. Hooper, A.B. Rees, D.C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 68.200 68.200 168.833 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C34 H32 Fe N4 O4 616.487 PROTOPORPHYRIN IX CONTAINING FE HEME non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking O4 P -3 94.971 PHOSPHATE ION non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Nat.Struct.Biol. NSBIEW 2024 1072-8368 5 1005 1012 10.1038/2975 9808046 Heme packing motifs revealed by the crystal structure of the tetra-heme cytochrome c554 from Nitrosomonas europaea. 1998 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 IMAGE PLATE 1997-07 MARRESEARCH M x-ray 1 1.08 1.0 BL7-1 SSRL 1.08 SYNCHROTRON SSRL BEAMLINE BL7-1 23656.900 CYTOCHROME C-554 1 nat polymer 94.971 PHOSPHATE ION 3 syn non-polymer 616.487 PROTOPORPHYRIN IX CONTAINING FE 4 syn non-polymer 18.015 water 66 nat water no no ADAPFEGRKKCSSCHKAQAQSWKDTAHAKAMESLKPNVKKEAKQKAKLDPAKDYTQDKDCVGCHVDGFGQKGGYTIESPK PMLTGVGCESCHGPGRNFRGDHRKSGQAFEKSGKKTPRKDLAKKGQDFHFEERCSACHLNYEGSPWKGAKAPYTPFTPEV DAKYTFKFDEMVKEVKAMHEHYKLEGVFEGEPKFKFHDEFQASAKPAKKGK ADAPFEGRKKCSSCHKAQAQSWKDTAHAKAMESLKPNVKKEAKQKAKLDPAKDYTQDKDCVGCHVDGFGQKGGYTIESPK PMLTGVGCESCHGPGRNFRGDHRKSGQAFEKSGKKTPRKDLAKKGQDFHFEERCSACHLNYEGSPWKGAKAPYTPFTPEV DAKYTFKFDEMVKEVKAMHEHYKLEGVFEGEPKFKFHDEFQASAKPAKKGK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Nitrosomonas sample 915 Nitrosomonas europaea 1 3.8 68 10.1 pH 10.1 pdbx_database_status software struct_conn computing repository Initial release Version format compliance Version format compliance Data collection Derived calculations Other Refinement description Data collection 1 0 1999-05-18 1 1 2008-03-24 1 2 2011-07-13 1 3 2019-07-17 1 4 2019-08-14 _pdbx_database_status.process_site _software.classification _struct_conn.pdbx_leaving_atom_flag Y BNL 1998-09-16 REL PO4 PHOSPHATE ION HEM PROTOPORPHYRIN IX CONTAINING FE HOH water PO4 218 2 PO4 PO4 218 A PO4 219 2 PO4 PO4 219 A PO4 220 2 PO4 PO4 220 A HEM 213 3 HEM HEM 213 A HEM 214 3 HEM HEM 214 A HEM 215 3 HEM HEM 215 A HEM 216 3 HEM HEM 216 A HOH 1 4 HOH HOH 221 A HOH 2 4 HOH HOH 222 A HOH 3 4 HOH HOH 223 A HOH 4 4 HOH HOH 224 A HOH 5 4 HOH HOH 225 A HOH 6 4 HOH HOH 226 A HOH 7 4 HOH HOH 227 A HOH 8 4 HOH HOH 228 A HOH 9 4 HOH HOH 229 A HOH 10 4 HOH HOH 230 A HOH 11 4 HOH HOH 231 A HOH 12 4 HOH HOH 232 A HOH 13 4 HOH HOH 233 A HOH 14 4 HOH HOH 234 A HOH 15 4 HOH HOH 235 A HOH 16 4 HOH HOH 236 A HOH 17 4 HOH HOH 237 A HOH 18 4 HOH HOH 238 A HOH 19 4 HOH HOH 239 A HOH 20 4 HOH HOH 240 A HOH 21 4 HOH HOH 241 A HOH 22 4 HOH HOH 242 A HOH 23 4 HOH HOH 243 A HOH 24 4 HOH HOH 244 A HOH 25 4 HOH HOH 245 A HOH 26 4 HOH HOH 246 A HOH 27 4 HOH HOH 247 A HOH 28 4 HOH HOH 248 A HOH 29 4 HOH HOH 249 A HOH 30 4 HOH HOH 250 A HOH 31 4 HOH HOH 251 A HOH 32 4 HOH HOH 252 A HOH 33 4 HOH HOH 253 A HOH 34 4 HOH HOH 254 A HOH 35 4 HOH HOH 255 A HOH 36 4 HOH HOH 256 A HOH 37 4 HOH HOH 257 A HOH 38 4 HOH HOH 258 A HOH 39 4 HOH HOH 259 A HOH 40 4 HOH HOH 260 A HOH 41 4 HOH HOH 261 A HOH 42 4 HOH HOH 262 A HOH 43 4 HOH HOH 263 A HOH 44 4 HOH HOH 264 A HOH 45 4 HOH HOH 265 A HOH 46 4 HOH HOH 266 A HOH 47 4 HOH HOH 267 A HOH 48 4 HOH HOH 268 A HOH 49 4 HOH HOH 269 A HOH 50 4 HOH HOH 270 A HOH 51 4 HOH HOH 271 A HOH 52 4 HOH HOH 272 A HOH 53 4 HOH HOH 273 A HOH 54 4 HOH HOH 274 A HOH 55 4 HOH HOH 275 A HOH 56 4 HOH HOH 276 A HOH 57 4 HOH HOH 277 A HOH 58 4 HOH HOH 278 A HOH 59 4 HOH HOH 279 A HOH 60 4 HOH HOH 280 A HOH 61 4 HOH HOH 281 A HOH 62 4 HOH HOH 282 A HOH 63 4 HOH HOH 283 A HOH 64 4 HOH HOH 284 A HOH 65 4 HOH HOH 285 A HOH 66 4 HOH HOH 286 A ALA 1 n 1 ALA 1 A ASP 2 n 2 ASP 2 A ALA 3 n 3 ALA 3 A PRO 4 n 4 PRO 4 A PHE 5 n 5 PHE 5 A GLU 6 n 6 GLU 6 A GLY 7 n 7 GLY 7 A ARG 8 n 8 ARG 8 A LYS 9 n 9 LYS 9 A LYS 10 n 10 LYS 10 A CYS 11 n 11 CYS 11 A SER 12 n 12 SER 12 A SER 13 n 13 SER 13 A CYS 14 n 14 CYS 14 A HIS 15 n 15 HIS 15 A LYS 16 n 16 LYS 16 A ALA 17 n 17 ALA 17 A GLN 18 n 18 GLN 18 A ALA 19 n 19 ALA 19 A GLN 20 n 20 GLN 20 A SER 21 n 21 SER 21 A TRP 22 n 22 TRP 22 A LYS 23 n 23 LYS 23 A ASP 24 n 24 ASP 24 A THR 25 n 25 THR 25 A ALA 26 n 26 ALA 26 A HIS 27 n 27 HIS 27 A ALA 28 n 28 ALA 28 A LYS 29 n 29 LYS 29 A ALA 30 n 30 ALA 30 A MET 31 n 31 MET 31 A GLU 32 n 32 GLU 32 A SER 33 n 33 SER 33 A LEU 34 n 34 LEU 34 A LYS 35 n 35 LYS 35 A PRO 36 n 36 PRO 36 A ASN 37 n 37 ASN 37 A VAL 38 n 38 VAL 38 A LYS 39 n 39 LYS 39 A LYS 40 n 40 LYS 40 A GLU 41 n 41 GLU 41 A ALA 42 n 42 ALA 42 A LYS 43 n 43 LYS 43 A GLN 44 n 44 GLN 44 A LYS 45 n 45 LYS 45 A ALA 46 n 46 ALA 46 A LYS 47 n 47 LYS 47 A LEU 48 n 48 LEU 48 A ASP 49 n 49 ASP 49 A PRO 50 n 50 PRO 50 A ALA 51 n 51 ALA 51 A LYS 52 n 52 LYS 52 A ASP 53 n 53 ASP 53 A TYR 54 n 54 TYR 54 A THR 55 n 55 THR 55 A GLN 56 n 56 GLN 56 A ASP 57 n 57 ASP 57 A LYS 58 n 58 LYS 58 A ASP 59 n 59 ASP 59 A CYS 60 n 60 CYS 60 A VAL 61 n 61 VAL 61 A GLY 62 n 62 GLY 62 A CYS 63 n 63 CYS 63 A HIS 64 n 64 HIS 64 A VAL 65 n 65 VAL 65 A ASP 66 n 66 ASP 66 A GLY 67 n 67 GLY 67 A PHE 68 n 68 PHE 68 A GLY 69 n 69 GLY 69 A GLN 70 n 70 GLN 70 A LYS 71 n 71 LYS 71 A GLY 72 n 72 GLY 72 A GLY 73 n 73 GLY 73 A TYR 74 n 74 TYR 74 A THR 75 n 75 THR 75 A ILE 76 n 76 ILE 76 A GLU 77 n 77 GLU 77 A SER 78 n 78 SER 78 A PRO 79 n 79 PRO 79 A LYS 80 n 80 LYS 80 A PRO 81 n 81 PRO 81 A MET 82 n 82 MET 82 A LEU 83 n 83 LEU 83 A THR 84 n 84 THR 84 A GLY 85 n 85 GLY 85 A VAL 86 n 86 VAL 86 A GLY 87 n 87 GLY 87 A CYS 88 n 88 CYS 88 A GLU 89 n 89 GLU 89 A SER 90 n 90 SER 90 A CYS 91 n 91 CYS 91 A HIS 92 n 92 HIS 92 A GLY 93 n 93 GLY 93 A PRO 94 n 94 PRO 94 A GLY 95 n 95 GLY 95 A ARG 96 n 96 ARG 96 A ASN 97 n 97 ASN 97 A PHE 98 n 98 PHE 98 A ARG 99 n 99 ARG 99 A GLY 100 n 100 GLY 100 A ASP 101 n 101 ASP 101 A HIS 102 n 102 HIS 102 A ARG 103 n 103 ARG 103 A LYS 104 n 104 LYS 104 A SER 105 n 105 SER 105 A GLY 106 n 106 GLY 106 A GLN 107 n 107 GLN 107 A ALA 108 n 108 ALA 108 A PHE 109 n 109 PHE 109 A GLU 110 n 110 GLU 110 A LYS 111 n 111 LYS 111 A SER 112 n 112 SER 112 A GLY 113 n 113 GLY 113 A LYS 114 n 114 LYS 114 A LYS 115 n 115 LYS 115 A THR 116 n 116 THR 116 A PRO 117 n 117 PRO 117 A ARG 118 n 118 ARG 118 A LYS 119 n 119 LYS 119 A ASP 120 n 120 ASP 120 A LEU 121 n 121 LEU 121 A ALA 122 n 122 ALA 122 A LYS 123 n 123 LYS 123 A LYS 124 n 124 LYS 124 A GLY 125 n 125 GLY 125 A GLN 126 n 126 GLN 126 A ASP 127 n 127 ASP 127 A PHE 128 n 128 PHE 128 A HIS 129 n 129 HIS 129 A PHE 130 n 130 PHE 130 A GLU 131 n 131 GLU 131 A GLU 132 n 132 GLU 132 A ARG 133 n 133 ARG 133 A CYS 134 n 134 CYS 134 A SER 135 n 135 SER 135 A ALA 136 n 136 ALA 136 A CYS 137 n 137 CYS 137 A HIS 138 n 138 HIS 138 A LEU 139 n 139 LEU 139 A ASN 140 n 140 ASN 140 A TYR 141 n 141 TYR 141 A GLU 142 n 142 GLU 142 A GLY 143 n 143 GLY 143 A SER 144 n 144 SER 144 A PRO 145 n 145 PRO 145 A TRP 146 n 146 TRP 146 A LYS 147 n 147 LYS 147 A GLY 148 n 148 GLY 148 A ALA 149 n 149 ALA 149 A LYS 150 n 150 LYS 150 A ALA 151 n 151 ALA 151 A PRO 152 n 152 PRO 152 A TYR 153 n 153 TYR 153 A THR 154 n 154 THR 154 A PRO 155 n 155 PRO 155 A PHE 156 n 156 PHE 156 A THR 157 n 157 THR 157 A PRO 158 n 158 PRO 158 A GLU 159 n 159 GLU 159 A VAL 160 n 160 VAL 160 A ASP 161 n 161 ASP 161 A ALA 162 n 162 ALA 162 A LYS 163 n 163 LYS 163 A TYR 164 n 164 TYR 164 A THR 165 n 165 THR 165 A PHE 166 n 166 PHE 166 A LYS 167 n 167 LYS 167 A PHE 168 n 168 PHE 168 A ASP 169 n 169 ASP 169 A GLU 170 n 170 GLU 170 A MET 171 n 171 MET 171 A VAL 172 n 172 VAL 172 A LYS 173 n 173 LYS 173 A GLU 174 n 174 GLU 174 A VAL 175 n 175 VAL 175 A LYS 176 n 176 LYS 176 A ALA 177 n 177 ALA 177 A MET 178 n 178 MET 178 A HIS 179 n 179 HIS 179 A GLU 180 n 180 GLU 180 A HIS 181 n 181 HIS 181 A TYR 182 n 182 TYR 182 A LYS 183 n 183 LYS 183 A LEU 184 n 184 LEU 184 A GLU 185 n 185 GLU 185 A GLY 186 n 186 GLY 186 A VAL 187 n 187 VAL 187 A PHE 188 n 188 PHE 188 A GLU 189 n 189 GLU 189 A GLY 190 n 190 GLY 190 A GLU 191 n 191 GLU 191 A PRO 192 n 192 PRO 192 A LYS 193 n 193 LYS 193 A PHE 194 n 194 PHE 194 A LYS 195 n 195 LYS 195 A PHE 196 n 196 PHE 196 A HIS 197 n 197 HIS 197 A ASP 198 n 198 ASP 198 A GLU 199 n 199 GLU 199 A PHE 200 n 200 PHE 200 A GLN 201 n 201 GLN 201 A ALA 202 n 202 ALA 202 A SER 203 n 203 SER 203 A ALA 204 n 204 ALA 204 A LYS 205 n 205 LYS 205 A PRO 206 n 206 PRO 206 A ALA 207 n 207 ALA 207 A LYS 208 n 208 LYS 208 A LYS 209 n 209 LYS 209 A GLY 210 n 210 GLY 210 A LYS 211 n 211 LYS 211 A author_defined_assembly 1 monomeric A HIS 15 A NE2 HIS 15 1_555 A HEM 213 E FE HEM 1_555 A HEM 213 E NA HEM 1_555 85.8 A HIS 15 A NE2 HIS 15 1_555 A HEM 213 E FE HEM 1_555 A HEM 213 E NB HEM 1_555 92.8 A HEM 213 E NA HEM 1_555 A HEM 213 E FE HEM 1_555 A HEM 213 E NB HEM 1_555 89.2 A HIS 15 A NE2 HIS 15 1_555 A HEM 213 E FE HEM 1_555 A HEM 213 E NC HEM 1_555 92.4 A HEM 213 E NA HEM 1_555 A HEM 213 E FE HEM 1_555 A HEM 213 E NC HEM 1_555 178.2 A HEM 213 E NB HEM 1_555 A HEM 213 E FE HEM 1_555 A HEM 213 E NC HEM 1_555 90.5 A HIS 15 A NE2 HIS 15 1_555 A HEM 213 E FE HEM 1_555 A HEM 213 E ND HEM 1_555 85.6 A HEM 213 E NA HEM 1_555 A HEM 213 E FE HEM 1_555 A HEM 213 E ND HEM 1_555 90.0 A HEM 213 E NB HEM 1_555 A HEM 213 E FE HEM 1_555 A HEM 213 E ND HEM 1_555 178.3 A HEM 213 E NC HEM 1_555 A HEM 213 E FE HEM 1_555 A HEM 213 E ND HEM 1_555 90.2 A HIS 15 A NE2 HIS 15 1_555 A HEM 213 E FE HEM 1_555 A HIS 102 A ND1 HIS 102 1_555 173.4 A HEM 213 E NA HEM 1_555 A HEM 213 E FE HEM 1_555 A HIS 102 A ND1 HIS 102 1_555 87.6 A HEM 213 E NB HEM 1_555 A HEM 213 E FE HEM 1_555 A HIS 102 A ND1 HIS 102 1_555 87.7 A HEM 213 E NC HEM 1_555 A HEM 213 E FE HEM 1_555 A HIS 102 A ND1 HIS 102 1_555 94.1 A HEM 213 E ND HEM 1_555 A HEM 213 E FE HEM 1_555 A HIS 102 A ND1 HIS 102 1_555 93.8 A HIS 64 A NE2 HIS 64 1_555 A HEM 214 F FE HEM 1_555 A HEM 214 F NA HEM 1_555 91.9 A HIS 64 A NE2 HIS 64 1_555 A HEM 214 F FE HEM 1_555 A HEM 214 F NB HEM 1_555 90.2 A HEM 214 F NA HEM 1_555 A HEM 214 F FE HEM 1_555 A HEM 214 F NB HEM 1_555 89.2 A HIS 64 A NE2 HIS 64 1_555 A HEM 214 F FE HEM 1_555 A HEM 214 F NC HEM 1_555 93.7 A HEM 214 F NA HEM 1_555 A HEM 214 F FE HEM 1_555 A HEM 214 F NC HEM 1_555 174.2 A HEM 214 F NB HEM 1_555 A HEM 214 F FE HEM 1_555 A HEM 214 F NC HEM 1_555 89.3 A HIS 64 A NE2 HIS 64 1_555 A HEM 214 F FE HEM 1_555 A HEM 214 F ND HEM 1_555 98.5 A HEM 214 F NA HEM 1_555 A HEM 214 F FE HEM 1_555 A HEM 214 F ND HEM 1_555 90.8 A HEM 214 F NB HEM 1_555 A HEM 214 F FE HEM 1_555 A HEM 214 F ND HEM 1_555 171.3 A HEM 214 F NC HEM 1_555 A HEM 214 F FE HEM 1_555 A HEM 214 F ND HEM 1_555 89.8 A HIS 92 A NE2 HIS 92 1_555 A HEM 215 G FE HEM 1_555 A HEM 215 G NA HEM 1_555 90.2 A HIS 92 A NE2 HIS 92 1_555 A HEM 215 G FE HEM 1_555 A HEM 215 G NB HEM 1_555 93.2 A HEM 215 G NA HEM 1_555 A HEM 215 G FE HEM 1_555 A HEM 215 G NB HEM 1_555 88.7 A HIS 92 A NE2 HIS 92 1_555 A HEM 215 G FE HEM 1_555 A HEM 215 G NC HEM 1_555 87.7 A HEM 215 G NA HEM 1_555 A HEM 215 G FE HEM 1_555 A HEM 215 G NC HEM 1_555 177.8 A HEM 215 G NB HEM 1_555 A HEM 215 G FE HEM 1_555 A HEM 215 G NC HEM 1_555 91.2 A HIS 92 A NE2 HIS 92 1_555 A HEM 215 G FE HEM 1_555 A HEM 215 G ND HEM 1_555 85.6 A HEM 215 G NA HEM 1_555 A HEM 215 G FE HEM 1_555 A HEM 215 G ND HEM 1_555 91.1 A HEM 215 G NB HEM 1_555 A HEM 215 G FE HEM 1_555 A HEM 215 G ND HEM 1_555 178.8 A HEM 215 G NC HEM 1_555 A HEM 215 G FE HEM 1_555 A HEM 215 G ND HEM 1_555 89.0 A HIS 92 A NE2 HIS 92 1_555 A HEM 215 G FE HEM 1_555 A HIS 179 A NE2 HIS 179 1_555 175.1 A HEM 215 G NA HEM 1_555 A HEM 215 G FE HEM 1_555 A HIS 179 A NE2 HIS 179 1_555 87.1 A HEM 215 G NB HEM 1_555 A HEM 215 G FE HEM 1_555 A HIS 179 A NE2 HIS 179 1_555 90.8 A HEM 215 G NC HEM 1_555 A HEM 215 G FE HEM 1_555 A HIS 179 A NE2 HIS 179 1_555 95.1 A HEM 215 G ND HEM 1_555 A HEM 215 G FE HEM 1_555 A HIS 179 A NE2 HIS 179 1_555 90.4 A HIS 27 A NE2 HIS 27 1_555 A HEM 216 H FE HEM 1_555 A HEM 216 H NA HEM 1_555 88.1 A HIS 27 A NE2 HIS 27 1_555 A HEM 216 H FE HEM 1_555 A HEM 216 H NB HEM 1_555 93.8 A HEM 216 H NA HEM 1_555 A HEM 216 H FE HEM 1_555 A HEM 216 H NB HEM 1_555 89.2 A HIS 27 A NE2 HIS 27 1_555 A HEM 216 H FE HEM 1_555 A HEM 216 H NC HEM 1_555 91.7 A HEM 216 H NA HEM 1_555 A HEM 216 H FE HEM 1_555 A HEM 216 H NC HEM 1_555 179.3 A HEM 216 H NB HEM 1_555 A HEM 216 H FE HEM 1_555 A HEM 216 H NC HEM 1_555 90.1 A HIS 27 A NE2 HIS 27 1_555 A HEM 216 H FE HEM 1_555 A HEM 216 H ND HEM 1_555 85.2 A HEM 216 H NA HEM 1_555 A HEM 216 H FE HEM 1_555 A HEM 216 H ND HEM 1_555 90.9 A HEM 216 H NB HEM 1_555 A HEM 216 H FE HEM 1_555 A HEM 216 H ND HEM 1_555 179.0 A HEM 216 H NC HEM 1_555 A HEM 216 H FE HEM 1_555 A HEM 216 H ND HEM 1_555 89.8 A HIS 27 A NE2 HIS 27 1_555 A HEM 216 H FE HEM 1_555 A HIS 138 A NE2 HIS 138 1_555 172.2 A HEM 216 H NA HEM 1_555 A HEM 216 H FE HEM 1_555 A HIS 138 A NE2 HIS 138 1_555 84.1 A HEM 216 H NB HEM 1_555 A HEM 216 H FE HEM 1_555 A HIS 138 A NE2 HIS 138 1_555 86.4 A HEM 216 H NC HEM 1_555 A HEM 216 H FE HEM 1_555 A HIS 138 A NE2 HIS 138 1_555 96.1 A HEM 216 H ND HEM 1_555 A HEM 216 H FE HEM 1_555 A HIS 138 A NE2 HIS 138 1_555 94.6 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O THR 116 A O THR 116 A N GLU 189 A N GLU 189 1 A CG GLU 110 A CG GLU 110 1 Y 1 A CD GLU 110 A CD GLU 110 1 Y 1 A OE1 GLU 110 A OE1 GLU 110 1 Y 1 A OE2 GLU 110 A OE2 GLU 110 1 Y 1 -15.18 2.50 113.10 97.92 A A A N CA C GLY GLY GLY 85 85 85 N 1 19.62 2.70 111.00 130.62 A A A N CA C HIS HIS HIS 129 129 129 N 1 16.91 2.50 121.70 138.61 A A A C N CA HIS PHE PHE 129 130 130 Y 1 -16.64 2.70 111.00 94.36 A A A N CA C PHE PHE PHE 130 130 130 N 1 A THR 55 -54.75 -3.30 1 A CYS 60 -135.26 -50.11 1 A MET 178 -89.26 -83.31 1 A HIS 179 169.80 159.25 1 A LYS 208 175.66 142.00 1 A LYS 209 105.87 21.83 PROTEIN_REP.PARAM TOPH19X.PRO IPS.PAR IPS.TOP HEM.PAR HEM.TOP TOPHCSDX.PRO -4.237 0.000 0.000 -4.237 0.000 8.475 REFMAC USED FIRST, THEN XPLOR BULK SOLVENT MODELING. KSOL : 0.335657 E/A**3 BSOL : 10 A**2 0.2540000 0.2080000 0.2080000 2.6 20.0 1002 11915 7.8 92.2 RANDOM 1 THROUGHOUT 0.0 MIRAS 2.6 20.0 66 1908 187 0 1655 0.015 1.9 0.3050000 0.3000000 2.72 135 1263 8 8.6 88.81 33.1 2.60 20.0 1BVB 11956 0.0970000 1 10.293 4.3 92.7 2.60 2.69 3.4 0.2910000 92.1 refinement X-PLOR refinement REFMAC model building X-PLOR data reduction DENZO data scaling SCALEPACK phasing X-PLOR CYTOCHROME C-554, PROTOPORPHYRIN IX CONTAINING FE HEME-PACKING MOTIFS REVEALED BY THE CRYSTAL STRUCTURE OF CYTOCHROME C554 FROM NITROSOMONAS EUROPAEA 1 N N 2 N N 2 N N 2 N N 3 N N 3 N N 3 N N 3 N N 4 N N A LYS 9 A LYS 9 HELX_P A CYS 14 A CYS 14 1 1 6 A LYS 16 A LYS 16 HELX_P A ASP 24 A ASP 24 1 2 9 A GLU 32 A GLU 32 HELX_P A LEU 34 A LEU 34 5 3 3 A LYS 40 A LYS 40 HELX_P A LYS 45 A LYS 45 1 4 6 A VAL 61 A VAL 61 HELX_P A CYS 63 A CYS 63 5 5 3 A PRO 81 A PRO 81 HELX_P A LEU 83 A LEU 83 5 6 3 A CYS 88 A CYS 88 HELX_P A HIS 92 A HIS 92 1 7 5 A ARG 99 A ARG 99 HELX_P A SER 112 A SER 112 1 8 14 A ARG 118 A ARG 118 HELX_P A LYS 123 A LYS 123 1 9 6 A GLU 131 A GLU 131 HELX_P A HIS 138 A HIS 138 1 10 8 A ALA 162 A ALA 162 HELX_P A TYR 164 A TYR 164 5 11 3 A PHE 168 A PHE 168 HELX_P A LYS 173 A LYS 173 1 12 6 A HIS 197 A HIS 197 HELX_P A SER 203 A SER 203 1 13 7 metalc 2.031 A HEM 213 E FE HEM 1_555 A HIS 15 A NE2 HIS 15 1_555 metalc 2.206 A HEM 213 E FE HEM 1_555 A HIS 102 A ND1 HIS 102 1_555 covale 1.775 none A HEM 213 E CAB HEM 1_555 A CYS 11 A SG CYS 11 1_555 covale 1.851 none A HEM 213 E CAC HEM 1_555 A CYS 14 A SG CYS 14 1_555 metalc 2.398 A HEM 214 F FE HEM 1_555 A HIS 64 A NE2 HIS 64 1_555 covale 1.784 none A HEM 214 F CAB HEM 1_555 A CYS 60 A SG CYS 60 1_555 covale 1.856 none A HEM 214 F CAC HEM 1_555 A CYS 63 A SG CYS 63 1_555 metalc 2.123 A HEM 215 G FE HEM 1_555 A HIS 92 A NE2 HIS 92 1_555 metalc 2.203 A HEM 215 G FE HEM 1_555 A HIS 179 A NE2 HIS 179 1_555 covale 1.775 none A HEM 215 G CAB HEM 1_555 A CYS 88 A SG CYS 88 1_555 covale 1.827 none A HEM 215 G CAC HEM 1_555 A CYS 91 A SG CYS 91 1_555 metalc 2.051 A HEM 216 H FE HEM 1_555 A HIS 27 A NE2 HIS 27 1_555 metalc 2.061 A HEM 216 H FE HEM 1_555 A HIS 138 A NE2 HIS 138 1_555 covale 1.788 none A HEM 216 H CAB HEM 1_555 A CYS 134 A SG CYS 134 1_555 covale 1.857 none A HEM 216 H CAC HEM 1_555 A CYS 137 A SG CYS 137 1_555 ELECTRON TRANSPORT CYTOCHROME, ELECTRON TRANSPORT, BIOLOGICAL NITRIFICATION A HIS 129 A HIS 129 1 A PHE 130 A PHE 130 0.36 A ALA 151 A ALA 151 1 A PRO 152 A PRO 152 0.62 A GLU 191 A GLU 191 1 A PRO 192 A PRO 192 0.04 C554_NITEU UNP 1 1 Q57142 MKIMIACGLVAAALFTLTSGQSLAADAPFEGRKKCSSCHKAQAQSWKDTAHAKAMESLKPNVKKEAKQKAKLDPAKDYTQ DKDCVGCHVDGFGQKGGYTIESPKPMLTGVGCESCHGPGRNFRGDHRKSGQAFEKSGKKTPRKDLAKKGQDFHFEERCSA CHLNYEGSPWKGAKAPYTPFTPEVDAKYTFKFDEMVKEVKAMHEHYKLEGVFEGEPKFKFHDEFQASAKPAKKGK 25 235 1BVB 1 211 Q57142 A 1 1 211 2 parallel A THR 116 A THR 116 A PRO 117 A PRO 117 A PHE 188 A PHE 188 A GLU 189 A GLU 189 BINDING SITE FOR RESIDUE PO4 A 218 Software 4 BINDING SITE FOR RESIDUE PO4 A 219 Software 3 BINDING SITE FOR RESIDUE PO4 A 220 Software 3 BINDING SITE FOR RESIDUE HEM A 213 Software 17 BINDING SITE FOR RESIDUE HEM A 214 Software 18 BINDING SITE FOR RESIDUE HEM A 215 Software 22 BINDING SITE FOR RESIDUE HEM A 216 Software 18 A LYS 45 A LYS 45 4 3_754 A LYS 167 A LYS 167 4 7_556 A LYS 193 A LYS 193 4 1_555 A HOH 286 I HOH 4 1_555 A LYS 39 A LYS 39 3 1_555 A LYS 40 A LYS 40 3 1_555 A GLU 41 A GLU 41 3 1_555 A LYS 47 A LYS 47 3 3_754 A LEU 184 A LEU 184 3 1_555 A GLU 185 A GLU 185 3 1_555 A LYS 10 A LYS 10 17 1_555 A CYS 11 A CYS 11 17 1_555 A CYS 14 A CYS 14 17 1_555 A HIS 15 A HIS 15 17 1_555 A HIS 92 A HIS 92 17 1_555 A HIS 102 A HIS 102 17 1_555 A ARG 103 A ARG 103 17 1_555 A ARG 118 A ARG 118 17 1_555 A GLN 126 A GLN 126 17 1_555 A PHE 128 A PHE 128 17 1_555 A LEU 184 A LEU 184 17 1_555 A GLU 185 A GLU 185 17 1_555 A GLY 186 A GLY 186 17 1_555 A VAL 187 A VAL 187 17 1_555 A LYS 211 A LYS 211 17 1_555 A HEM 215 G HEM 17 1_555 A HOH 222 I HOH 17 1_555 A LYS 39 A LYS 39 18 1_555 A ALA 42 A ALA 42 18 1_555 A TYR 54 A TYR 54 18 1_555 A ASP 59 A ASP 59 18 1_555 A CYS 60 A CYS 60 18 1_555 A CYS 63 A CYS 63 18 1_555 A HIS 64 A HIS 64 18 1_555 A CYS 137 A CYS 137 18 1_555 A HIS 138 A HIS 138 18 1_555 A ASN 140 A ASN 140 18 1_555 A PRO 152 A PRO 152 18 1_555 A THR 154 A THR 154 18 1_555 A PRO 155 A PRO 155 18 1_555 A PHE 156 A PHE 156 18 1_555 A TYR 164 A TYR 164 18 1_555 A HEM 216 H HEM 18 1_555 A HOH 221 I HOH 18 1_555 A HOH 275 I HOH 18 1_555 A CYS 11 A CYS 11 22 1_555 A SER 12 A SER 12 22 1_555 A HIS 15 A HIS 15 22 1_555 A GLN 18 A GLN 18 22 1_555 A ALA 19 A ALA 19 22 1_555 A HIS 27 A HIS 27 22 1_555 A GLY 87 A GLY 87 22 1_555 A CYS 88 A CYS 88 22 1_555 A CYS 91 A CYS 91 22 1_555 A HIS 92 A HIS 92 22 1_555 A PHE 130 A PHE 130 22 1_555 A MET 178 A MET 178 22 1_555 A HIS 179 A HIS 179 22 1_555 A HIS 181 A HIS 181 22 1_555 A TYR 182 A TYR 182 22 1_555 A LEU 184 A LEU 184 22 1_555 A PHE 194 A PHE 194 22 1_555 A HIS 197 A HIS 197 22 1_555 A HEM 213 E HEM 22 1_555 A HOH 222 I HOH 22 1_555 A HOH 231 I HOH 22 1_555 A HOH 261 I HOH 22 1_555 A ALA 26 A ALA 26 18 1_555 A HIS 27 A HIS 27 18 1_555 A ALA 30 A ALA 30 18 1_555 A SER 33 A SER 33 18 1_555 A LYS 39 A LYS 39 18 1_555 A CYS 63 A CYS 63 18 1_555 A HIS 64 A HIS 64 18 1_555 A VAL 86 A VAL 86 18 1_555 A SER 90 A SER 90 18 1_555 A ARG 133 A ARG 133 18 1_555 A CYS 134 A CYS 134 18 1_555 A CYS 137 A CYS 137 18 1_555 A HIS 138 A HIS 138 18 1_555 A ALA 177 A ALA 177 18 1_555 A MET 178 A MET 178 18 1_555 A HEM 214 F HEM 18 1_555 A HOH 262 I HOH 18 1_555 A HOH 270 I HOH 18 1_555 95 P 43 2 2