0.011414
0.000000
0.000000
0.000000
0.011414
0.000000
0.000000
0.000000
0.010399
0.00000
0.00000
0.00000
Cramer, P.
Varrot, A.
Barillas-Mury, C.
Kafatos, F.C.
Mueller, C.W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
87.610
87.610
96.160
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Structure Fold.Des.
FODEFH
1263
0969-2126
7
841
852
10.1016/S0969-2126(99)80107-5
10425685
Structure of the specificity domain of the Dorsal homologue Gambif1 bound to DNA.
1999
DC D 1 HAS WRONG CHIRALITY AT ATOM C4'
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
MIRRORS
IMAGE PLATE
1997-10-16
MAR scanner 345 mm plate
M
x-ray
1
0.997
1.0
ID2
ESRF
0.997
SYNCHROTRON
ESRF BEAMLINE ID2
4584.985
DNA DUPLEX
1
syn
polymer
4593.999
DNA DUPLEX
1
syn
polymer
19627.447
TRANSCRIPTION FACTOR GAMBIF1
SPECIFICITY DOMAIN
1
man
polymer
18.015
water
36
nat
water
no
no
(DC)(DT)(DG)(DG)(DG)(DA)(DA)(DT)(DT)(DT)(DC)(DC)(DC)(DA)(DG)
CTGGGAATTTCCCAG
D
polydeoxyribonucleotide
no
no
(DC)(DT)(DG)(DG)(DG)(DT)(DT)(DA)(DA)(DA)(DC)(DC)(DC)(DA)(DG)
CTGGGTTAAACCCAG
E
polydeoxyribonucleotide
no
no
PYVEITEQPHPKALRFRYECEGRSAGSIPGVNTTAEQKTFPSIQVHGYRGRAVVVVSCVTKEGPEHKPHPHNLVGKEGCK
KGVCTVEINSTTMSYTFNNLGIQCVKKKDVEEALRLRQEIRVDPFRTGFGHAKEPGSIDLNAVRLCFQVFLEGQQRGRFT
EPLTPVVSDIIYDKK
PYVEITEQPHPKALRFRYECEGRSAGSIPGVNTTAEQKTFPSIQVHGYRGRAVVVVSCVTKEGPEHKPHPHNLVGKEGCK
KGVCTVEINSTTMSYTFNNLGIQCVKKKDVEEALRLRQEIRVDPFRTGFGHAKEPGSIDLNAVRLCFQVFLEGQQRGRFT
EPLTPVVSDIIYDKK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
African malaria mosquito
Anopheles
Escherichia
Escherichia coli
sample
CYTOPLASM
7165
Anopheles gambiae
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
PET-15B
1
2.5
50
5.6
pH 5.6
1.177
1
19
D
1
D
15
-11.597
D_DC1:DG15_D
1
-14.767
-0.556
0.087
-0.389
-12.895
1
20
D
2
D
14
-7.333
D_DT2:DA14_D
2
-11.216
-0.416
0.517
-0.441
-3.947
1
19
D
3
D
13
-4.329
D_DG3:DC13_D
3
-2.470
-0.044
0.180
-0.240
0.076
1
19
D
4
D
12
-8.826
D_DG4:DC12_D
4
-0.044
-0.449
-0.193
-0.602
9.447
1
19
D
5
D
11
-2.172
D_DG5:DC11_D
5
-3.995
-0.275
0.081
-0.142
5.948
1
20
D
6
D
10
7.011
D_DA6:DT10_D
6
-11.780
0.105
-0.094
-0.489
6.395
1
20
D
7
D
9
-0.924
D_DA7:DT9_D
7
-21.112
0.223
0.058
-0.351
-6.395
1
20
D
9
D
7
-0.924
D_DT9:DA7_D
8
-21.112
-0.223
0.058
-0.351
-5.948
1
20
D
10
D
6
7.011
D_DT10:DA6_D
9
-11.780
-0.105
-0.094
-0.489
-9.447
1
19
D
11
D
5
-2.172
D_DC11:DG5_D
10
-3.995
0.275
0.081
-0.142
-0.076
1
19
D
12
D
4
-8.826
D_DC12:DG4_D
11
-0.044
0.449
-0.193
-0.602
3.947
1
19
D
13
D
3
-4.329
D_DC13:DG3_D
12
-2.470
0.044
0.180
-0.240
12.895
1
20
D
14
D
2
-7.333
D_DA14:DT2_D
13
-11.216
0.416
0.517
-0.441
-1.177
1
19
D
15
D
1
-11.597
D_DG15:DC1_D
14
-14.767
0.556
0.087
-0.389
-4.073
1
19
E
21
E
35
-9.906
E_DC21:DG35_E
15
-12.229
-0.676
0.268
-0.266
-10.274
1
20
E
22
E
34
-10.603
E_DT22:DA34_E
16
-13.099
-0.576
0.419
-0.335
-3.872
1
19
E
23
E
33
-2.544
E_DG23:DC33_E
17
-6.689
-0.260
-0.127
-0.206
1.148
1
19
E
24
E
32
-2.876
E_DG24:DC32_E
18
1.587
-0.438
-0.074
-0.385
4.139
1
19
E
25
E
31
-0.595
E_DG25:DC31_E
19
-12.286
-0.055
-0.020
-0.212
8.543
1
20
E
26
E
30
10.242
E_DT26:DA30_E
20
-10.676
-1.081
-0.163
-0.269
7.493
1
20
E
27
E
29
1.237
E_DT27:DA29_E
21
-19.049
-1.822
-0.083
-0.362
0.000
1
1
E
28
E
28
15.005
E_DA28:DA28_E
22
-21.092
0.000
0.375
0.894
-7.493
1
20
E
29
E
27
1.237
E_DA29:DT27_E
23
-19.049
1.822
-0.083
-0.362
-8.543
1
20
E
30
E
26
10.242
E_DA30:DT26_E
24
-10.676
1.081
-0.163
-0.269
-4.139
1
19
E
31
E
25
-0.595
E_DC31:DG25_E
25
-12.286
0.055
-0.020
-0.212
-1.148
1
19
E
32
E
24
-2.876
E_DC32:DG24_E
26
1.587
0.438
-0.074
-0.385
3.872
1
19
E
33
E
23
-2.544
E_DC33:DG23_E
27
-6.689
0.260
-0.127
-0.206
10.274
1
20
E
34
E
22
-10.603
E_DA34:DT22_E
28
-13.099
0.576
0.419
-0.335
4.073
1
19
E
35
E
21
-9.906
E_DG35:DC21_E
29
-12.229
0.676
0.268
-0.266
3.604
40.758
D
D
1
2
8.731
D
D
15
14
3.725
6.060
-0.052
-0.572
DD_DC1DT2:DA14DG15_DD
1
0.453
-0.652
40.322
-1.575
0.131
3.008
37.554
D
D
2
3
-0.835
D
D
14
13
3.012
-0.538
0.022
0.256
DD_DT2DG3:DC13DA14_DD
2
1.013
-1.573
37.538
0.462
0.087
3.429
29.208
D
D
3
4
-0.287
D
D
13
12
3.334
-0.144
0.951
0.160
DD_DG3DG4:DC12DC13_DD
3
3.874
-7.704
28.955
0.349
-1.012
3.115
41.905
D
D
4
5
-0.523
D
D
12
11
3.090
-0.373
-0.413
-0.066
DD_DG4DG5:DC11DC12_DD
4
-3.976
5.568
41.723
-0.055
0.183
3.461
29.280
D
D
5
6
-5.253
D
D
11
10
3.449
-2.650
-0.207
-0.495
DD_DG5DA6:DT10DC11_DD
5
1.774
-3.516
29.110
-0.372
0.816
3.216
40.595
D
D
6
7
-6.107
D
D
10
9
3.193
-4.226
-0.681
0.014
DD_DA6DA7:DT9DT10_DD
6
-3.020
4.364
40.275
0.482
0.651
6.609
76.490
D
D
7
9
0.614
D
D
9
7
6.614
0.761
0.000
-0.561
DD_DA7DT9:DA7DT9_DD
7
0.000
0.000
76.487
-0.498
0.000
3.216
40.595
D
D
9
10
-6.107
D
D
7
6
3.193
-4.226
0.681
0.014
DD_DT9DT10:DA6DA7_DD
8
3.020
-4.364
40.275
0.482
-0.651
3.461
29.280
D
D
10
11
-5.253
D
D
6
5
3.449
-2.650
0.207
-0.495
DD_DT10DC11:DG5DA6_DD
9
-1.774
3.516
29.110
-0.372
-0.816
3.115
41.905
D
D
11
12
-0.523
D
D
5
4
3.090
-0.373
0.413
-0.066
DD_DC11DC12:DG4DG5_DD
10
3.976
-5.568
41.723
-0.055
-0.183
3.429
29.208
D
D
12
13
-0.287
D
D
4
3
3.334
-0.144
-0.951
0.160
DD_DC12DC13:DG3DG4_DD
11
-3.874
7.704
28.955
0.349
1.012
3.008
37.554
D
D
13
14
-0.835
D
D
3
2
3.012
-0.538
-0.022
0.256
DD_DC13DA14:DT2DG3_DD
12
-1.013
1.573
37.538
0.462
-0.087
3.604
40.758
D
D
14
15
8.731
D
D
2
1
3.725
6.060
0.052
-0.572
DD_DA14DG15:DC1DT2_DD
13
-0.453
0.652
40.322
-1.575
-0.131
3.285
40.636
E
E
21
22
9.043
E
E
35
34
3.402
6.256
-0.073
-0.519
EE_DC21DT22:DA34DG35_EE
14
1.146
-1.656
40.156
-1.463
0.236
3.166
38.724
E
E
22
23
4.978
E
E
34
33
3.147
3.296
0.043
0.393
EE_DT22DG23:DC33DA34_EE
15
2.047
-3.092
38.537
0.202
0.178
3.271
31.038
E
E
23
24
-7.278
E
E
33
32
3.286
-3.884
1.086
0.277
EE_DG23DG24:DC32DC33_EE
16
1.353
-2.536
30.771
1.269
-1.767
3.276
40.786
E
E
24
25
4.163
E
E
32
31
3.263
2.899
-0.621
0.084
EE_DG24DG25:DC31DC32_EE
17
-1.065
1.529
40.674
-0.199
0.773
3.242
27.311
E
E
25
26
-6.192
E
E
31
30
3.172
-2.918
-0.016
-0.837
EE_DG25DT26:DA30DC31_EE
18
-0.520
1.104
27.153
-1.059
-0.094
3.283
33.479
E
E
26
27
-6.611
E
E
30
29
3.257
-3.795
-0.406
-0.200
EE_DT26DT27:DA29DA30_EE
19
-3.331
5.803
33.107
0.281
0.153
3.415
48.259
E
E
27
28
-0.617
E
E
29
28
3.417
-0.505
0.668
0.562
EE_DT27DA28:DA28DA29_EE
20
0.281
-0.343
48.256
0.728
-0.794
3.415
48.259
E
E
28
29
-0.617
E
E
28
27
3.417
-0.505
-0.668
0.562
EE_DA28DA29:DT27DA28_EE
21
-0.281
0.343
48.256
0.728
0.794
3.283
33.479
E
E
29
30
-6.611
E
E
27
26
3.257
-3.795
0.406
-0.200
EE_DA29DA30:DT26DT27_EE
22
3.331
-5.803
33.107
0.281
-0.153
3.242
27.311
E
E
30
31
-6.192
E
E
26
25
3.172
-2.918
0.016
-0.837
EE_DA30DC31:DG25DT26_EE
23
0.520
-1.104
27.153
-1.059
0.094
3.276
40.786
E
E
31
32
4.163
E
E
25
24
3.263
2.899
0.621
0.084
EE_DC31DC32:DG24DG25_EE
24
1.065
-1.529
40.674
-0.199
-0.773
3.271
31.038
E
E
32
33
-7.278
E
E
24
23
3.286
-3.884
-1.086
0.277
EE_DC32DC33:DG23DG24_EE
25
-1.353
2.536
30.771
1.269
1.767
3.166
38.724
E
E
33
34
4.978
E
E
23
22
3.147
3.296
-0.043
0.393
EE_DC33DA34:DT22DG23_EE
26
-2.047
3.092
38.537
0.202
-0.178
3.285
40.636
E
E
34
35
9.043
E
E
22
21
3.402
6.256
0.073
-0.519
EE_DA34DG35:DC21DT22_EE
27
-1.146
1.656
40.156
-1.463
-0.236
database_PDB_caveat
pdbx_struct_assembly
pdbx_struct_assembly_gen
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Other
Advisory
Derived calculations
1
0
1999-07-12
1
1
2008-03-24
1
2
2011-07-13
1
3
2017-01-11
1
4
2017-11-29
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.oligomeric_details
Y
BNL
1998-09-16
REL
HOH
water
HOH
505
4
HOH
HOH
505
D
HOH
519
4
HOH
HOH
519
D
HOH
501
4
HOH
HOH
501
A
HOH
502
4
HOH
HOH
502
A
HOH
503
4
HOH
HOH
503
A
HOH
504
4
HOH
HOH
504
A
HOH
506
4
HOH
HOH
506
A
HOH
507
4
HOH
HOH
507
A
HOH
508
4
HOH
HOH
508
A
HOH
509
4
HOH
HOH
509
A
HOH
510
4
HOH
HOH
510
A
HOH
511
4
HOH
HOH
511
A
HOH
512
4
HOH
HOH
512
A
HOH
513
4
HOH
HOH
513
A
HOH
514
4
HOH
HOH
514
A
HOH
515
4
HOH
HOH
515
A
HOH
516
4
HOH
HOH
516
A
HOH
517
4
HOH
HOH
517
A
HOH
518
4
HOH
HOH
518
A
HOH
520
4
HOH
HOH
520
A
HOH
521
4
HOH
HOH
521
A
HOH
522
4
HOH
HOH
522
A
HOH
523
4
HOH
HOH
523
A
HOH
524
4
HOH
HOH
524
A
HOH
525
4
HOH
HOH
525
A
HOH
526
4
HOH
HOH
526
A
HOH
527
4
HOH
HOH
527
A
HOH
528
4
HOH
HOH
528
A
HOH
529
4
HOH
HOH
529
A
HOH
530
4
HOH
HOH
530
A
HOH
531
4
HOH
HOH
531
A
HOH
532
4
HOH
HOH
532
A
HOH
533
4
HOH
HOH
533
A
HOH
534
4
HOH
HOH
534
A
HOH
535
4
HOH
HOH
535
A
HOH
536
4
HOH
HOH
536
A
C
1
n
1
DC
1
D
T
2
n
2
DT
2
D
G
3
n
3
DG
3
D
G
4
n
4
DG
4
D
G
5
n
5
DG
5
D
A
6
n
6
DA
6
D
A
7
n
7
DA
7
D
T
8
n
8
DT
8
D
T
9
n
9
DT
9
D
T
10
n
10
DT
10
D
C
11
n
11
DC
11
D
C
12
n
12
DC
12
D
C
13
n
13
DC
13
D
A
14
n
14
DA
14
D
G
15
n
15
DG
15
D
C
21
n
1
DC
21
E
T
22
n
2
DT
22
E
G
23
n
3
DG
23
E
G
24
n
4
DG
24
E
G
25
n
5
DG
25
E
T
26
n
6
DT
26
E
T
27
n
7
DT
27
E
A
28
n
8
DA
28
E
A
29
n
9
DA
29
E
A
30
n
10
DA
30
E
C
31
n
11
DC
31
E
C
32
n
12
DC
32
E
C
33
n
13
DC
33
E
A
34
n
14
DA
34
E
G
35
n
15
DG
35
E
PRO
48
n
1
PRO
48
A
TYR
49
n
2
TYR
49
A
VAL
50
n
3
VAL
50
A
GLU
51
n
4
GLU
51
A
ILE
52
n
5
ILE
52
A
THR
53
n
6
THR
53
A
GLU
54
n
7
GLU
54
A
GLN
55
n
8
GLN
55
A
PRO
56
n
9
PRO
56
A
HIS
57
n
10
HIS
57
A
PRO
58
n
11
PRO
58
A
LYS
59
n
12
LYS
59
A
ALA
60
n
13
ALA
60
A
LEU
61
n
14
LEU
61
A
ARG
62
n
15
ARG
62
A
PHE
63
n
16
PHE
63
A
ARG
64
n
17
ARG
64
A
TYR
65
n
18
TYR
65
A
GLU
66
n
19
GLU
66
A
CYS
67
n
20
CYS
67
A
GLU
68
n
21
GLU
68
A
GLY
69
n
22
GLY
69
A
ARG
70
n
23
ARG
70
A
SER
71
n
24
SER
71
A
ALA
72
n
25
ALA
72
A
GLY
73
n
26
GLY
73
A
SER
74
n
27
SER
74
A
ILE
75
n
28
ILE
75
A
PRO
76
n
29
PRO
76
A
GLY
77
n
30
GLY
77
A
VAL
78
n
31
VAL
78
A
ASN
79
n
32
ASN
79
A
THR
80
n
33
THR
80
A
THR
81
n
34
THR
81
A
ALA
82
n
35
ALA
82
A
GLU
83
n
36
GLU
83
A
GLN
84
n
37
GLN
84
A
LYS
85
n
38
LYS
85
A
THR
86
n
39
THR
86
A
PHE
87
n
40
PHE
87
A
PRO
88
n
41
PRO
88
A
SER
89
n
42
SER
89
A
ILE
90
n
43
ILE
90
A
GLN
91
n
44
GLN
91
A
VAL
92
n
45
VAL
92
A
HIS
93
n
46
HIS
93
A
GLY
94
n
47
GLY
94
A
TYR
95
n
48
TYR
95
A
ARG
96
n
49
ARG
96
A
GLY
97
n
50
GLY
97
A
ARG
98
n
51
ARG
98
A
ALA
99
n
52
ALA
99
A
VAL
100
n
53
VAL
100
A
VAL
101
n
54
VAL
101
A
VAL
102
n
55
VAL
102
A
VAL
103
n
56
VAL
103
A
SER
104
n
57
SER
104
A
CYS
105
n
58
CYS
105
A
VAL
106
n
59
VAL
106
A
THR
107
n
60
THR
107
A
LYS
108
n
61
LYS
108
A
GLU
109
n
62
GLU
109
A
GLY
110
n
63
GLY
110
A
PRO
111
n
64
PRO
111
A
GLU
112
n
65
GLU
112
A
HIS
113
n
66
HIS
113
A
LYS
114
n
67
LYS
114
A
PRO
115
n
68
PRO
115
A
HIS
116
n
69
HIS
116
A
PRO
117
n
70
PRO
117
A
HIS
118
n
71
HIS
118
A
ASN
119
n
72
ASN
119
A
LEU
120
n
73
LEU
120
A
VAL
121
n
74
VAL
121
A
GLY
122
n
75
GLY
122
A
LYS
123
n
76
LYS
123
A
GLU
124
n
77
GLU
124
A
GLY
125
n
78
GLY
125
A
CYS
126
n
79
CYS
126
A
LYS
127
n
80
LYS
127
A
LYS
128
n
81
LYS
128
A
GLY
129
n
82
GLY
129
A
VAL
130
n
83
VAL
130
A
CYS
131
n
84
CYS
131
A
THR
132
n
85
THR
132
A
VAL
133
n
86
VAL
133
A
GLU
134
n
87
GLU
134
A
ILE
135
n
88
ILE
135
A
ASN
136
n
89
ASN
136
A
SER
137
n
90
SER
137
A
THR
138
n
91
THR
138
A
THR
139
n
92
THR
139
A
MET
140
n
93
MET
140
A
SER
141
n
94
SER
141
A
TYR
142
n
95
TYR
142
A
THR
143
n
96
THR
143
A
PHE
144
n
97
PHE
144
A
ASN
145
n
98
ASN
145
A
ASN
146
n
99
ASN
146
A
LEU
147
n
100
LEU
147
A
GLY
148
n
101
GLY
148
A
ILE
149
n
102
ILE
149
A
GLN
150
n
103
GLN
150
A
CYS
151
n
104
CYS
151
A
VAL
152
n
105
VAL
152
A
LYS
153
n
106
LYS
153
A
LYS
154
n
107
LYS
154
A
LYS
155
n
108
LYS
155
A
ASP
156
n
109
ASP
156
A
VAL
157
n
110
VAL
157
A
GLU
158
n
111
GLU
158
A
GLU
159
n
112
GLU
159
A
ALA
160
n
113
ALA
160
A
LEU
161
n
114
LEU
161
A
ARG
162
n
115
ARG
162
A
LEU
163
n
116
LEU
163
A
ARG
164
n
117
ARG
164
A
GLN
165
n
118
GLN
165
A
GLU
166
n
119
GLU
166
A
ILE
167
n
120
ILE
167
A
ARG
168
n
121
ARG
168
A
VAL
169
n
122
VAL
169
A
ASP
170
n
123
ASP
170
A
PRO
171
n
124
PRO
171
A
PHE
172
n
125
PHE
172
A
ARG
173
n
126
ARG
173
A
THR
174
n
127
THR
174
A
GLY
175
n
128
GLY
175
A
PHE
176
n
129
PHE
176
A
GLY
177
n
130
GLY
177
A
HIS
178
n
131
HIS
178
A
ALA
179
n
132
ALA
179
A
LYS
180
n
133
LYS
180
A
GLU
181
n
134
GLU
181
A
PRO
182
n
135
PRO
182
A
GLY
183
n
136
GLY
183
A
SER
184
n
137
SER
184
A
ILE
185
n
138
ILE
185
A
ASP
186
n
139
ASP
186
A
LEU
187
n
140
LEU
187
A
ASN
188
n
141
ASN
188
A
ALA
189
n
142
ALA
189
A
VAL
190
n
143
VAL
190
A
ARG
191
n
144
ARG
191
A
LEU
192
n
145
LEU
192
A
CYS
193
n
146
CYS
193
A
PHE
194
n
147
PHE
194
A
GLN
195
n
148
GLN
195
A
VAL
196
n
149
VAL
196
A
PHE
197
n
150
PHE
197
A
LEU
198
n
151
LEU
198
A
GLU
199
n
152
GLU
199
A
GLY
200
n
153
GLY
200
A
GLN
201
n
154
GLN
201
A
GLN
202
n
155
GLN
202
A
ARG
203
n
156
ARG
203
A
GLY
204
n
157
GLY
204
A
ARG
205
n
158
ARG
205
A
PHE
206
n
159
PHE
206
A
THR
207
n
160
THR
207
A
GLU
208
n
161
GLU
208
A
PRO
209
n
162
PRO
209
A
LEU
210
n
163
LEU
210
A
THR
211
n
164
THR
211
A
PRO
212
n
165
PRO
212
A
VAL
213
n
166
VAL
213
A
VAL
214
n
167
VAL
214
A
SER
215
n
168
SER
215
A
ASP
216
n
169
ASP
216
A
ILE
217
n
170
ILE
217
A
ILE
218
n
171
ILE
218
A
TYR
219
n
172
TYR
219
A
ASP
220
n
173
ASP
220
A
LYS
221
n
174
LYS
221
A
LYS
222
n
175
LYS
222
A
author_defined_assembly
6
hexameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
6_566
x,-y+1,-z+3/2
crystal symmetry operation
0.0000000000
87.6100000000
144.2400000000
A
O
TYR
142
C
O
TYR
95
A
N
ILE
90
C
N
ILE
43
A
O
SER
89
C
O
SER
42
A
N
GLU
54
C
N
GLU
7
A
O
CYS
131
C
O
CYS
84
A
N
VAL
103
C
N
VAL
56
A
O
VAL
100
C
O
VAL
53
A
N
PHE
197
C
N
PHE
150
A
O
LEU
198
C
O
LEU
151
A
N
GLU
208
C
N
GLU
161
A
O
ASN
119
C
O
ASN
72
A
N
GLN
150
C
N
GLN
103
1
D
C4'
DC
1
WRONG HAND
1
D
DC
1
0.122
SIDE CHAIN
1
E
DG
35
0.092
SIDE CHAIN
1
D
D
O3'
P
DC
DT
1
2
2.47
1
17.82
1.20
115.70
133.52
D
D
D
C5'
C4'
C3'
DC
DC
DC
1
1
1
N
1
3.00
0.40
120.30
123.30
D
D
D
C6
N1
C2
DC
DC
DC
1
1
1
N
1
-4.87
0.50
119.90
115.03
D
D
D
C2
N3
C4
DC
DC
DC
1
1
1
N
1
-3.45
0.50
121.00
117.55
D
D
D
C5
C6
N1
DC
DC
DC
1
1
1
N
1
-4.84
0.70
121.90
117.06
D
D
D
N3
C2
O2
DC
DC
DC
1
1
1
N
1
15.04
1.20
110.70
125.74
D
D
D
O5'
P
OP2
DT
DT
DT
2
2
2
N
1
9.47
1.20
115.70
125.17
D
D
D
C5'
C4'
C3'
DT
DT
DT
2
2
2
N
1
14.43
1.10
109.80
124.23
D
D
D
C5'
C4'
O4'
DT
DT
DT
2
2
2
N
1
-10.02
0.80
105.90
95.88
D
D
D
O4'
C1'
C2'
DT
DT
DT
2
2
2
N
1
-9.29
0.70
108.00
98.71
D
D
D
O4'
C1'
N1
DT
DT
DT
2
2
2
N
1
-3.87
0.60
115.20
111.33
D
D
D
N3
C4
C5
DT
DT
DT
2
2
2
N
1
6.34
0.60
118.00
124.34
D
D
D
C4
C5
C6
DT
DT
DT
2
2
2
N
1
-4.47
0.60
123.70
119.23
D
D
D
C5
C6
N1
DT
DT
DT
2
2
2
N
1
13.74
0.60
119.90
133.64
D
D
D
N3
C4
O4
DT
DT
DT
2
2
2
N
1
-9.89
0.70
124.90
115.01
D
D
D
C5
C4
O4
DT
DT
DT
2
2
2
N
1
-6.26
0.60
119.00
112.74
D
D
D
C4
C5
C7
DT
DT
DT
2
2
2
N
1
-5.80
0.80
105.90
100.10
D
D
D
O4'
C1'
C2'
DG
DG
DG
3
3
3
N
1
-3.98
0.60
130.40
126.42
D
D
D
C6
C5
N7
DG
DG
DG
3
3
3
N
1
-12.45
0.90
116.20
103.75
D
D
D
N1
C2
N2
DG
DG
DG
3
3
3
N
1
10.55
0.70
119.90
130.45
D
D
D
N3
C2
N2
DG
DG
DG
3
3
3
N
1
-7.40
0.60
119.90
112.50
D
D
D
N1
C6
O6
DG
DG
DG
3
3
3
N
1
7.62
0.60
128.60
136.22
D
D
D
C5
C6
O6
DG
DG
DG
3
3
3
N
1
-8.03
1.20
119.70
111.67
D
D
D
C3'
O3'
P
DG
DG
DG
3
3
4
Y
1
-7.13
0.90
105.70
98.57
D
D
D
O5'
P
OP1
DG
DG
DG
4
4
4
N
1
-3.25
0.40
104.50
101.25
D
D
D
O4'
C4'
C3'
DG
DG
DG
4
4
4
N
1
-6.76
0.80
105.90
99.14
D
D
D
O4'
C1'
C2'
DG
DG
DG
4
4
4
N
1
-4.63
0.50
104.30
99.67
D
D
D
C5
N7
C8
DG
DG
DG
4
4
4
N
1
4.83
0.50
113.10
117.93
D
D
D
N7
C8
N9
DG
DG
DG
4
4
4
N
1
-3.71
0.40
106.40
102.69
D
D
D
C8
N9
C4
DG
DG
DG
4
4
4
N
1
-6.83
0.90
116.20
109.37
D
D
D
N1
C2
N2
DG
DG
DG
4
4
4
N
1
-4.77
0.60
128.60
123.83
D
D
D
C5
C6
O6
DG
DG
DG
4
4
4
N
1
-7.73
1.20
119.70
111.97
D
D
D
C3'
O3'
P
DG
DG
DG
4
4
5
Y
1
-3.04
0.40
104.50
101.46
D
D
D
O4'
C4'
C3'
DG
DG
DG
5
5
5
N
1
7.75
1.20
115.70
123.45
D
D
D
C5'
C4'
C3'
DG
DG
DG
5
5
5
N
1
14.13
1.10
109.80
123.93
D
D
D
C5'
C4'
O4'
DG
DG
DG
5
5
5
N
1
-5.44
0.70
102.20
96.76
D
D
D
C4'
C3'
C2'
DG
DG
DG
5
5
5
N
1
-6.88
0.60
125.10
118.22
D
D
D
C6
N1
C2
DG
DG
DG
5
5
5
N
1
6.38
0.60
123.90
130.28
D
D
D
N1
C2
N3
DG
DG
DG
5
5
5
N
1
-6.33
0.50
128.60
122.27
D
D
D
N3
C4
C5
DG
DG
DG
5
5
5
N
1
5.69
0.60
118.80
124.49
D
D
D
C4
C5
C6
DG
DG
DG
5
5
5
N
1
-4.05
0.40
106.40
102.35
D
D
D
C8
N9
C4
DG
DG
DG
5
5
5
N
1
3.24
0.40
105.40
108.64
D
D
D
N9
C4
C5
DG
DG
DG
5
5
5
N
1
-6.09
0.60
130.40
124.31
D
D
D
C6
C5
N7
DG
DG
DG
5
5
5
N
1
-13.03
0.90
116.20
103.17
D
D
D
N1
C2
N2
DG
DG
DG
5
5
5
N
1
6.64
0.70
119.90
126.54
D
D
D
N3
C2
N2
DG
DG
DG
5
5
5
N
1
8.19
1.30
126.50
134.69
D
D
D
C4
N9
C1'
DG
DG
DG
5
5
5
N
1
-11.87
1.90
104.00
92.13
D
D
D
O3'
P
O5'
DG
DA
DA
5
6
6
Y
1
12.67
1.10
110.50
123.17
D
D
D
O3'
P
OP2
DT
DC
DC
10
11
11
Y
1
-16.32
2.20
105.20
88.88
D
D
D
O3'
P
OP1
DT
DC
DC
10
11
11
Y
1
7.98
1.20
110.70
118.68
D
D
D
O5'
P
OP2
DC
DC
DC
11
11
11
N
1
-2.88
0.40
104.50
101.62
D
D
D
O4'
C4'
C3'
DC
DC
DC
11
11
11
N
1
12.92
1.40
114.30
127.22
D
D
D
N1
C1'
C2'
DC
DC
DC
11
11
11
N
1
-4.21
0.70
118.00
113.79
D
D
D
N3
C4
N4
DC
DC
DC
11
11
11
N
1
-7.37
1.10
118.80
111.43
D
D
D
C2
N1
C1'
DC
DC
DC
11
11
11
N
1
-4.90
0.70
102.20
97.30
D
D
D
C4'
C3'
C2'
DC
DC
DC
12
12
12
N
1
-4.98
0.80
105.90
100.92
D
D
D
O4'
C1'
C2'
DC
DC
DC
12
12
12
N
1
6.94
0.30
108.30
115.24
D
D
D
O4'
C1'
N1
DC
DC
DC
12
12
12
N
1
10.79
0.70
118.00
128.79
D
D
D
N3
C4
N4
DC
DC
DC
12
12
12
N
1
-8.59
0.70
120.20
111.61
D
D
D
C5
C4
N4
DC
DC
DC
12
12
12
N
1
-5.93
0.90
105.70
99.77
D
D
D
O5'
P
OP1
DC
DC
DC
13
13
13
N
1
9.74
1.20
110.70
120.44
D
D
D
O5'
P
OP2
DC
DC
DC
13
13
13
N
1
-5.97
0.80
102.40
96.43
D
D
D
C3'
C2'
C1'
DC
DC
DC
13
13
13
N
1
2.15
0.30
108.30
110.45
D
D
D
O4'
C1'
N1
DC
DC
DC
13
13
13
N
1
3.80
0.50
119.90
123.70
D
D
D
C2
N3
C4
DC
DC
DC
13
13
13
N
1
-3.76
0.50
117.40
113.64
D
D
D
C4
C5
C6
DC
DC
DC
13
13
13
N
1
3.74
0.50
121.00
124.74
D
D
D
C5
C6
N1
DC
DC
DC
13
13
13
N
1
4.67
0.70
121.90
126.57
D
D
D
N3
C2
O2
DC
DC
DC
13
13
13
N
1
-14.00
0.80
109.40
95.40
D
D
D
O5'
C5'
C4'
DA
DA
DA
14
14
14
N
1
-6.13
0.40
104.50
98.37
D
D
D
O4'
C4'
C3'
DA
DA
DA
14
14
14
N
1
-11.27
1.00
110.10
98.83
D
D
D
C1'
O4'
C4'
DA
DA
DA
14
14
14
N
1
-7.10
0.80
105.90
98.80
D
D
D
O4'
C1'
C2'
DA
DA
DA
14
14
14
N
1
8.87
1.40
114.30
123.17
D
D
D
N9
C1'
C2'
DA
DA
DA
14
14
14
N
1
-4.24
0.70
108.00
103.76
D
D
D
O4'
C1'
N9
DA
DA
DA
14
14
14
N
1
-8.53
0.60
118.60
110.07
D
D
D
C6
N1
C2
DA
DA
DA
14
14
14
N
1
8.72
0.50
129.30
138.02
D
D
D
N1
C2
N3
DA
DA
DA
14
14
14
N
1
-3.51
0.50
110.60
107.09
D
D
D
C2
N3
C4
DA
DA
DA
14
14
14
N
1
4.48
0.50
117.00
121.48
D
D
D
C4
C5
C6
DA
DA
DA
14
14
14
N
1
3.31
0.40
105.80
109.11
D
D
D
N9
C4
C5
DA
DA
DA
14
14
14
N
1
15.23
1.20
119.70
134.93
D
D
D
C3'
O3'
P
DA
DA
DG
14
14
15
Y
1
11.72
0.30
108.30
120.02
D
D
D
O4'
C1'
N9
DG
DG
DG
15
15
15
N
1
-7.51
0.60
125.10
117.59
D
D
D
C6
N1
C2
DG
DG
DG
15
15
15
N
1
5.13
0.50
111.50
116.63
D
D
D
C5
C6
N1
DG
DG
DG
15
15
15
N
1
-5.46
0.60
128.60
123.14
D
D
D
C5
C6
O6
DG
DG
DG
15
15
15
N
1
3.85
0.60
118.60
122.45
E
E
E
C6
N1
C2
DA
DA
DA
28
28
28
N
1
D
D
O4'
C1'
DT
DT
2
2
0.078
0.011
1.420
1.498
N
1
D
D
C5
C6
DT
DT
2
2
-0.043
0.007
1.339
1.296
N
1
D
D
C5
C7
DT
DT
2
2
0.043
0.006
1.496
1.539
N
1
D
D
N7
C8
DG
DG
3
3
0.070
0.006
1.305
1.375
N
1
D
D
C5
N7
DG
DG
4
4
0.037
0.006
1.388
1.425
N
1
D
D
N3
C4
DG
DG
5
5
0.088
0.007
1.350
1.438
N
1
D
D
O3'
P
DG
DA
5
6
0.087
0.012
1.607
1.694
Y
1
D
D
N3
C4
DC
DC
11
11
0.045
0.007
1.335
1.380
N
1
D
D
C5
C6
DC
DC
11
11
0.052
0.008
1.339
1.391
N
1
D
D
C4
N4
DC
DC
12
12
0.057
0.009
1.335
1.392
N
1
D
D
O4'
C4'
DA
DA
14
14
0.071
0.009
1.449
1.520
N
1
D
D
O3'
C3'
DA
DA
14
14
-0.047
0.006
1.419
1.372
N
1
E
E
C2
N3
DA
DA
28
28
-0.063
0.009
1.331
1.268
N
1
E
E
C5
C6
DA
DA
28
28
-0.058
0.009
1.406
1.348
N
1
E
E
N9
C4
DA
DA
28
28
-0.048
0.006
1.374
1.326
N
1
A
LYS
59
-152.02
53.36
1
A
ALA
72
71.16
-17.13
1
A
ALA
99
-172.84
126.20
1
A
GLU
112
-93.32
52.73
1
A
THR
138
-121.71
-50.62
1
A
ARG
168
76.61
30.51
1
A
ARG
173
54.38
71.09
1
A
ARG
203
-33.18
119.70
PARHCSDX.PRO
TOPHCSDX.PRO
DNA-RNA.PARAM
TOPH19.PEP
PARAM19.SOL
DNA-RNA.TOP
TOPH19.SOL
52.8
-3.84
-3.84
7.68
AT EARLY STAGES, PROGRAM REFMAC WAS USED. TO ACCOUNT FOR AVERAGED BASE PAIRS (D6-D10, E26-E30), TWO STRUCTURES CONTAINING DIFFERENT DNA STRANDS (CHAIN E AND D) WERE REFINED INDIVIDUALLY. AT A FINAL STAGE, BOTH DNA STRANDS WERE INCLUDED IN THE MODEL AND GIVEN HALF OCCUPANCY. CYS 126 AND CYS 131 ARE IN CLOSE PROXIMITY AND THE ELECTRON DENSITY WOULD ALSO ALLOW MODELING OF A DISULPHIDE BRIDGE. THIS MIGHT INDICATE PARTIAL OXIDATION. LOOP 81-84 IS BADLY ORDERED. DURING REFINEMENT, IT HAS BEEN GIVEN AN OCCUPANCY OF 0.5. LYS 222 IS THE LAST RESIDUE IN THE MODEL. THE QUALITY OF ITS ELECTRON DENSITY IS POOR AND DID NOT ALLOW UNAMBIGUOUS MODELING.
THE C-TERMINAL DIMERIZATION DOMAIN OF THE REL HOMOLOGY
REGION OF GAMBIF1 IS PRESENT IN THE USED CONSTRUCT AND THE
CRYSTALS. HOWEVER, IT IS DISORDERED AND COULD NOT BE
INCLUDED IN THE MODEL.
0.288
0.014
0.219
0.219
2.70
10.00
404
8575
4.7
84.1
RANDOM
1
RESTRAINED
THROUGHOUT
0.0
MIR
2.70
10.00
36
2022
0
609
1377
0.011
1.7
3.6
2.5
5.6
2.5
6.4
3.5
8.7
3.5
0.426
0.060
0.436
2.82
51
1013
8
5.0
88.5
93.5
2.7
20.0
1BVO
8927
0
0.041
1
18.9
3.8
82.9
2.70
2.80
2.7
0.286
1
2.8
88.5
data reduction
DENZO
data scaling
SCALEPACK
model building
X-PLOR
3.8
refinement
X-PLOR
3.8
phasing
X-PLOR
3.8
TRANSCRIPTION FACTOR GAMBIF1/DNA Complex
DORSAL HOMOLOGUE GAMBIF1 BOUND TO DNA
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
A
GLU
66
C
GLU
19
HELX_P
A
GLU
68
C
GLU
21
5
1
3
A
LYS
154
C
LYS
107
HELX_P
A
ILE
167
C
ILE
120
1
2
14
A
GLY
177
C
GLY
130
HELX_P
A
ALA
179
C
ALA
132
5
3
3
A
PRO
182
C
PRO
135
HELX_P
A
SER
184
C
SER
137
5
4
3
disulf
2.844
A
CYS
126
C
SG
CYS
79
1_555
A
CYS
131
C
SG
CYS
84
1_555
hydrog
WATSON-CRICK
D
DC
1
A
N3
DC
1
1_555
D
DG
15
A
N1
DG
15
6_566
hydrog
WATSON-CRICK
D
DC
1
A
N4
DC
1
1_555
D
DG
15
A
O6
DG
15
6_566
hydrog
WATSON-CRICK
D
DC
1
A
O2
DC
1
1_555
D
DG
15
A
N2
DG
15
6_566
hydrog
WATSON-CRICK
D
DT
2
A
N3
DT
2
1_555
D
DA
14
A
N1
DA
14
6_566
hydrog
WATSON-CRICK
D
DT
2
A
O4
DT
2
1_555
D
DA
14
A
N6
DA
14
6_566
hydrog
WATSON-CRICK
D
DG
3
A
N1
DG
3
1_555
D
DC
13
A
N3
DC
13
6_566
hydrog
WATSON-CRICK
D
DG
3
A
N2
DG
3
1_555
D
DC
13
A
O2
DC
13
6_566
hydrog
WATSON-CRICK
D
DG
3
A
O6
DG
3
1_555
D
DC
13
A
N4
DC
13
6_566
hydrog
WATSON-CRICK
D
DG
4
A
N1
DG
4
1_555
D
DC
12
A
N3
DC
12
6_566
hydrog
WATSON-CRICK
D
DG
4
A
N2
DG
4
1_555
D
DC
12
A
O2
DC
12
6_566
hydrog
WATSON-CRICK
D
DG
4
A
O6
DG
4
1_555
D
DC
12
A
N4
DC
12
6_566
hydrog
WATSON-CRICK
D
DG
5
A
N1
DG
5
1_555
D
DC
11
A
N3
DC
11
6_566
hydrog
WATSON-CRICK
D
DG
5
A
N2
DG
5
1_555
D
DC
11
A
O2
DC
11
6_566
hydrog
WATSON-CRICK
D
DG
5
A
O6
DG
5
1_555
D
DC
11
A
N4
DC
11
6_566
hydrog
WATSON-CRICK
D
DA
6
A
N1
DA
6
1_555
D
DT
10
A
N3
DT
10
6_566
hydrog
WATSON-CRICK
D
DA
6
A
N6
DA
6
1_555
D
DT
10
A
O4
DT
10
6_566
hydrog
WATSON-CRICK
D
DA
7
A
N1
DA
7
1_555
D
DT
9
A
N3
DT
9
6_566
hydrog
WATSON-CRICK
D
DA
7
A
N6
DA
7
1_555
D
DT
9
A
O4
DT
9
6_566
hydrog
WATSON-CRICK
D
DT
9
A
N3
DT
9
1_555
D
DA
7
A
N1
DA
7
6_566
hydrog
WATSON-CRICK
D
DT
9
A
O4
DT
9
1_555
D
DA
7
A
N6
DA
7
6_566
hydrog
WATSON-CRICK
D
DT
10
A
N3
DT
10
1_555
D
DA
6
A
N1
DA
6
6_566
hydrog
WATSON-CRICK
D
DT
10
A
O4
DT
10
1_555
D
DA
6
A
N6
DA
6
6_566
hydrog
WATSON-CRICK
D
DC
11
A
N3
DC
11
1_555
D
DG
5
A
N1
DG
5
6_566
hydrog
WATSON-CRICK
D
DC
11
A
N4
DC
11
1_555
D
DG
5
A
O6
DG
5
6_566
hydrog
WATSON-CRICK
D
DC
11
A
O2
DC
11
1_555
D
DG
5
A
N2
DG
5
6_566
hydrog
WATSON-CRICK
D
DC
12
A
N3
DC
12
1_555
D
DG
4
A
N1
DG
4
6_566
hydrog
WATSON-CRICK
D
DC
12
A
N4
DC
12
1_555
D
DG
4
A
O6
DG
4
6_566
hydrog
WATSON-CRICK
D
DC
12
A
O2
DC
12
1_555
D
DG
4
A
N2
DG
4
6_566
hydrog
WATSON-CRICK
D
DC
13
A
N3
DC
13
1_555
D
DG
3
A
N1
DG
3
6_566
hydrog
WATSON-CRICK
D
DC
13
A
N4
DC
13
1_555
D
DG
3
A
O6
DG
3
6_566
hydrog
WATSON-CRICK
D
DC
13
A
O2
DC
13
1_555
D
DG
3
A
N2
DG
3
6_566
hydrog
WATSON-CRICK
D
DA
14
A
N1
DA
14
1_555
D
DT
2
A
N3
DT
2
6_566
hydrog
WATSON-CRICK
D
DA
14
A
N6
DA
14
1_555
D
DT
2
A
O4
DT
2
6_566
hydrog
WATSON-CRICK
D
DG
15
A
N1
DG
15
1_555
D
DC
1
A
N3
DC
1
6_566
hydrog
WATSON-CRICK
D
DG
15
A
N2
DG
15
1_555
D
DC
1
A
O2
DC
1
6_566
hydrog
WATSON-CRICK
D
DG
15
A
O6
DG
15
1_555
D
DC
1
A
N4
DC
1
6_566
hydrog
WATSON-CRICK
E
DC
21
B
N3
DC
1
1_555
E
DG
35
B
N1
DG
15
6_566
hydrog
WATSON-CRICK
E
DC
21
B
N4
DC
1
1_555
E
DG
35
B
O6
DG
15
6_566
hydrog
WATSON-CRICK
E
DC
21
B
O2
DC
1
1_555
E
DG
35
B
N2
DG
15
6_566
hydrog
WATSON-CRICK
E
DT
22
B
N3
DT
2
1_555
E
DA
34
B
N1
DA
14
6_566
hydrog
WATSON-CRICK
E
DT
22
B
O4
DT
2
1_555
E
DA
34
B
N6
DA
14
6_566
hydrog
WATSON-CRICK
E
DG
23
B
N1
DG
3
1_555
E
DC
33
B
N3
DC
13
6_566
hydrog
WATSON-CRICK
E
DG
23
B
N2
DG
3
1_555
E
DC
33
B
O2
DC
13
6_566
hydrog
WATSON-CRICK
E
DG
23
B
O6
DG
3
1_555
E
DC
33
B
N4
DC
13
6_566
hydrog
WATSON-CRICK
E
DG
24
B
N1
DG
4
1_555
E
DC
32
B
N3
DC
12
6_566
hydrog
WATSON-CRICK
E
DG
24
B
N2
DG
4
1_555
E
DC
32
B
O2
DC
12
6_566
hydrog
WATSON-CRICK
E
DG
24
B
O6
DG
4
1_555
E
DC
32
B
N4
DC
12
6_566
hydrog
WATSON-CRICK
E
DG
25
B
N1
DG
5
1_555
E
DC
31
B
N3
DC
11
6_566
hydrog
WATSON-CRICK
E
DG
25
B
N2
DG
5
1_555
E
DC
31
B
O2
DC
11
6_566
hydrog
WATSON-CRICK
E
DG
25
B
O6
DG
5
1_555
E
DC
31
B
N4
DC
11
6_566
hydrog
WATSON-CRICK
E
DT
26
B
N3
DT
6
1_555
E
DA
30
B
N1
DA
10
6_566
hydrog
WATSON-CRICK
E
DT
26
B
O4
DT
6
1_555
E
DA
30
B
N6
DA
10
6_566
hydrog
WATSON-CRICK
E
DT
27
B
N3
DT
7
1_555
E
DA
29
B
N1
DA
9
6_566
hydrog
WATSON-CRICK
E
DT
27
B
O4
DT
7
1_555
E
DA
29
B
N6
DA
9
6_566
hydrog
TYPE_1_PAIR
E
DA
28
B
N1
DA
8
1_555
E
DA
28
B
N6
DA
8
6_566
hydrog
TYPE_1_PAIR
E
DA
28
B
N6
DA
8
1_555
E
DA
28
B
N1
DA
8
6_566
hydrog
WATSON-CRICK
E
DA
29
B
N1
DA
9
1_555
E
DT
27
B
N3
DT
7
6_566
hydrog
WATSON-CRICK
E
DA
29
B
N6
DA
9
1_555
E
DT
27
B
O4
DT
7
6_566
hydrog
WATSON-CRICK
E
DA
30
B
N1
DA
10
1_555
E
DT
26
B
N3
DT
6
6_566
hydrog
WATSON-CRICK
E
DA
30
B
N6
DA
10
1_555
E
DT
26
B
O4
DT
6
6_566
hydrog
WATSON-CRICK
E
DC
31
B
N3
DC
11
1_555
E
DG
25
B
N1
DG
5
6_566
hydrog
WATSON-CRICK
E
DC
31
B
N4
DC
11
1_555
E
DG
25
B
O6
DG
5
6_566
hydrog
WATSON-CRICK
E
DC
31
B
O2
DC
11
1_555
E
DG
25
B
N2
DG
5
6_566
hydrog
WATSON-CRICK
E
DC
32
B
N3
DC
12
1_555
E
DG
24
B
N1
DG
4
6_566
hydrog
WATSON-CRICK
E
DC
32
B
N4
DC
12
1_555
E
DG
24
B
O6
DG
4
6_566
hydrog
WATSON-CRICK
E
DC
32
B
O2
DC
12
1_555
E
DG
24
B
N2
DG
4
6_566
hydrog
WATSON-CRICK
E
DC
33
B
N3
DC
13
1_555
E
DG
23
B
N1
DG
3
6_566
hydrog
WATSON-CRICK
E
DC
33
B
N4
DC
13
1_555
E
DG
23
B
O6
DG
3
6_566
hydrog
WATSON-CRICK
E
DC
33
B
O2
DC
13
1_555
E
DG
23
B
N2
DG
3
6_566
hydrog
WATSON-CRICK
E
DA
34
B
N1
DA
14
1_555
E
DT
22
B
N3
DT
2
6_566
hydrog
WATSON-CRICK
E
DA
34
B
N6
DA
14
1_555
E
DT
22
B
O4
DT
2
6_566
hydrog
WATSON-CRICK
E
DG
35
B
N1
DG
15
1_555
E
DC
21
B
N3
DC
1
6_566
hydrog
WATSON-CRICK
E
DG
35
B
N2
DG
15
1_555
E
DC
21
B
O2
DC
1
6_566
hydrog
WATSON-CRICK
E
DG
35
B
O6
DG
15
1_555
E
DC
21
B
N4
DC
1
6_566
COMPLEX (TRANSCRIPTION FACTOR/DNA)
TRANSCRIPTION FACTOR, REL PROTEIN, MORPHOGEN, IMMUNITY, DEVELOPMENT, INSECTS, COMPLEX (TRANSCRIPTION FACTOR-DNA), COMPLEX (TRANSCRIPTION FACTOR-DNA) complex
Q17034_ANOGA
UNP
3
1
Q17034
MAGYVNGADAAFLPIEGILGESDLLDDIIHVIGKDIREEMPPVPNQRPYVEITEQPHPKALRFRYECEGRSAGSIPGVNT
TAEQKTFPSIQVHGYRGRAVVVVSCVTKEGPEHKPHPHNLVGKEGCKKGVCTVEINSTTMSYTFNNLGIQCVKKKDVEEA
LRLRQEIRVDPFRTGFGHAKEPGSIDLNAVRLCFQVFLEGQQRGRFTEPLTPVVSDIIYDKKAMSDLIICRLSDCTAPVS
GGKEIILLCEKVVKEDIKVRFFEKKGNATVWENYAEFSHTDVHKQVAISFRTPPYRTIDISDPVRVFVQLERPSDNTYSE
ARDFQFIPLDTVDLRRKRQKLTGSSNVFLPVVTAPLPGPSPPSSLGMPGNIPNLSQLDATGGQSASTSGLPRGIYTYHNA
SAFQQMPKEEIKNEPGDSPSHNPSNQYQLQPMQPMFTAQSTSPGPDRSPATLTPSPGIGGPISPLDPGNVTPTPPAYTTL
GGTGGTMGNLFGQFGTGFSNAATQPNASVPMFETNLPGPSNGWVQPVPSHTQNGPSQPQPQQQNPFNLLNFGTLPLATGD
PLMAMSTANTNNQPNVGPPSLGSDFYMNLDLANLDPVFNSSELRSVLGSLSTTDLNRLEQTANMQTSGGNYQQHSASNQQ
QAIKALLATQQLQQQQQQQQQQQQQQQQGQTGQADRIDNDEDLTDSFTKLSTNDLN
1BVO
PDB
1
1BVO
1BVO
PDB
2
1BVO
48
222
1BVO
48
222
Q17034
A
1
1
175
1
15
1BVO
1
15
1BVO
D
2
1
15
21
35
1BVO
21
35
1BVO
E
3
1
15
3
4
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
SER
141
C
SER
94
A
PHE
144
C
PHE
97
A
PRO
88
C
PRO
41
A
HIS
93
C
HIS
46
A
TYR
49
C
TYR
2
A
GLU
54
C
GLU
7
A
CYS
131
C
CYS
84
A
GLU
134
C
GLU
87
A
ALA
99
C
ALA
52
A
VAL
106
C
VAL
59
A
ARG
191
C
ARG
144
A
GLU
199
C
GLU
152
A
PHE
206
C
PHE
159
A
PRO
209
C
PRO
162
A
ASN
119
C
ASN
72
A
VAL
121
C
VAL
74
A
GLY
148
C
GLY
101
A
GLN
150
C
GLN
103
95
P 43 2 2